2022-02-07T19:34:52,416 Created temporary directory: /tmp/pip-ephem-wheel-cache-a6k149ub
2022-02-07T19:34:52,422 Created temporary directory: /tmp/pip-req-tracker-of6ajrsu
2022-02-07T19:34:52,423 Initialized build tracking at /tmp/pip-req-tracker-of6ajrsu
2022-02-07T19:34:52,424 Created build tracker: /tmp/pip-req-tracker-of6ajrsu
2022-02-07T19:34:52,424 Entered build tracker: /tmp/pip-req-tracker-of6ajrsu
2022-02-07T19:34:52,425 Created temporary directory: /tmp/pip-wheel-fpx4rayr
2022-02-07T19:34:52,499 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-02-07T19:34:52,505 2 location(s) to search for versions of mclumix:
2022-02-07T19:34:52,505 * https://pypi.org/simple/mclumix/
2022-02-07T19:34:52,505 * https://www.piwheels.org/simple/mclumix/
2022-02-07T19:34:52,506 Fetching project page and analyzing links: https://pypi.org/simple/mclumix/
2022-02-07T19:34:52,507 Getting page https://pypi.org/simple/mclumix/
2022-02-07T19:34:52,511 Found index url https://pypi.org/simple
2022-02-07T19:34:52,723   Found link https://files.pythonhosted.org/packages/a0/ed/9f543ae58042cacdcda86ade069e9b34bddbd66614dd0e6c1af2a8aea017/mclumix-0.0.post1.tar.gz#sha256=1c35621ad405c55a6538993ca4fb8c5d10d57fd16286c01be71c4b7cd0443ce5 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.post1
2022-02-07T19:34:52,724   Found link https://files.pythonhosted.org/packages/9d/3e/19d4b8e84efd9c7815631dcf977d53c4ae624e5882c6d09800a5a01fe1e0/mclumix-0.0.0.0.5.tar.gz#sha256=2b5473aaaf82ed9097ee1f59c0549848b863260edc38f5269ea2fad6d4288da5 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.0.0.5
2022-02-07T19:34:52,726   Found link https://files.pythonhosted.org/packages/22/b8/855d42e9e76d167af8843290aaea8140f13958f88570eb79599c0efac0ae/mclumix-0.0.0.0.6.tar.gz#sha256=237b6357b288919a3e45e2451ee5f96d830cadceb1b13ca771c259de18eac14d (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.0.0.6
2022-02-07T19:34:52,727   Found link https://files.pythonhosted.org/packages/cf/3d/1d226c3fea26e55a7576020837cd0997ab156171601c72f7b97e2102d543/mclumix-0.0.0.1.tar.gz#sha256=520a575c8ed21f43f34f70e243e04ae9e3231ddee82e3787206376d943b054b0 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.0.1
2022-02-07T19:34:52,728   Found link https://files.pythonhosted.org/packages/f0/03/b0027982c8a226e1623cdf32d06a2fc36b754af859b656c92b4672fb8651/mclumix-0.0.1.tar.gz#sha256=25cf56d8b38789b96c60c6c1daa75d9fbda2c7d2e6acac7e75e88d376e94966b (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.1
2022-02-07T19:34:52,730   Found link https://files.pythonhosted.org/packages/49/a6/5b1322f5a10ff634ba6ffbf0c2d0b1361d7f274b38d9d73ce022e67a565b/mclumix-0.0.2.tar.gz#sha256=9976abd631f7bf9cfd375910a377dc0f9e6a0215456d3a713207aedfe4a2518b (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.2
2022-02-07T19:34:52,731   Found link https://files.pythonhosted.org/packages/2e/55/46b850c79e0e5e5d084baf516f962e8a6635d4eb985e96a1084bf3c17b1e/mclumix-0.0.3.tar.gz#sha256=4e4446b67ddae69eebf797cfe847695b1099893af5fdd9c8782e8b69910b145c (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.3
2022-02-07T19:34:52,732   Found link https://files.pythonhosted.org/packages/d1/d9/90cc6a0ba23818baef9aa2a6d09f69fee1d947d5cc0700d86cfa81e27746/mclumix-0.0.4.tar.gz#sha256=587e91c3a7ef194f5111111c207618a8785dc63772cdb7925caae15d61923d5f (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.4
2022-02-07T19:34:52,733   Found link https://files.pythonhosted.org/packages/a1/e9/c872dc3e46b8b2782ae40f886160b76b22d77d60995f5f9cd614ff928cc3/mclumix-0.0.5.tar.gz#sha256=39d1907ce0a773789789ac8f33b05225daace4fc4ef7d404d2d57bf05025db56 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.5
2022-02-07T19:34:52,734   Found link https://files.pythonhosted.org/packages/1d/65/a2af1a523876b836d499640fb2d3665637542aa8b03aa31bb19b24443f46/mclumix-0.0.6.tar.gz#sha256=7ea22bbdf1b7d67f409b6c3b732de21871785e7c6921acb906ce82296ba260a8 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.6
2022-02-07T19:34:52,735 Fetching project page and analyzing links: https://www.piwheels.org/simple/mclumix/
2022-02-07T19:34:52,736 Getting page https://www.piwheels.org/simple/mclumix/
2022-02-07T19:34:52,738 Found index url https://www.piwheels.org/simple
2022-02-07T19:34:52,969   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.0.0.5-py3-none-any.whl#sha256=a10c6cdbfae622a9a95a8e5cf928e121ca1316757cfbb8f685e4b7eb8aa92f95 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,969   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.0.1-py3-none-any.whl#sha256=e5792f85954734cfd2b346918742e004233c3f87cef4d48177b7cfe54b648cae (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,970   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.1-py3-none-any.whl#sha256=cf1bbdf93eadb6de4777409540c0573cb73a811deef9dc035d23f4ea05980de9 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,970   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.2-py3-none-any.whl#sha256=476597fdf15866acc26e14142987bdfe47e7032af350bb2cd76c01ab69faa92b (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,971   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.3-py3-none-any.whl#sha256=1594f88f6dcc449efe54942726a633b6440b1d574e0487a736c1f9235d814099 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,971   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.4-py3-none-any.whl#sha256=7d410c2d61af729ac0459130bafafa544843d86b3821b38481706a13594d16f9 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,972   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.5-py3-none-any.whl#sha256=6f6b93b454c2e7a4d2b94ccc71f56e7b8205e9b3f98b9195250a3ac565243cbf (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,972   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.6-py3-none-any.whl#sha256=55cb4106bb858e8e1cb00feddca54f9cd531424cd5d675d3b5167302067ad38a (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,973   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.post1-py3-none-any.whl#sha256=4c8955a5d364d5bb04880c6c7987c73f1a90daaeb71ba82e6fa7c0ce4282568e (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T19:34:52,973 Skipping link: not a file: https://www.piwheels.org/simple/mclumix/
2022-02-07T19:34:52,974 Skipping link: not a file: https://pypi.org/simple/mclumix/
2022-02-07T19:34:53,021 Given no hashes to check 1 links for project 'mclumix': discarding no candidates
2022-02-07T19:34:53,053 Collecting mclumix==0.0.0.0.6
2022-02-07T19:34:53,056   Created temporary directory: /tmp/pip-unpack-w56mzi11
2022-02-07T19:34:53,301   Downloading mclumix-0.0.0.0.6.tar.gz (57 kB)
2022-02-07T19:34:53,581   Added mclumix==0.0.0.0.6 from https://files.pythonhosted.org/packages/22/b8/855d42e9e76d167af8843290aaea8140f13958f88570eb79599c0efac0ae/mclumix-0.0.0.0.6.tar.gz#sha256=237b6357b288919a3e45e2451ee5f96d830cadceb1b13ca771c259de18eac14d to build tracker '/tmp/pip-req-tracker-of6ajrsu'
2022-02-07T19:34:53,582   Running setup.py (path:/tmp/pip-wheel-fpx4rayr/mclumix_98d7ecff101e438ca55f3c8ec3a935d7/setup.py) egg_info for package mclumix
2022-02-07T19:34:53,584   Created temporary directory: /tmp/pip-pip-egg-info-ih769m0c
2022-02-07T19:34:53,584   Preparing metadata (setup.py): started
2022-02-07T19:34:53,585   Running command python setup.py egg_info
2022-02-07T19:34:55,216   Warning: 'keywords' should be a list, got type 'tuple'
2022-02-07T19:34:55,624   running egg_info
2022-02-07T19:34:55,629   creating /tmp/pip-pip-egg-info-ih769m0c/mclumix.egg-info
2022-02-07T19:34:55,645   writing manifest file '/tmp/pip-pip-egg-info-ih769m0c/mclumix.egg-info/SOURCES.txt'
2022-02-07T19:34:55,688   writing manifest file '/tmp/pip-pip-egg-info-ih769m0c/mclumix.egg-info/SOURCES.txt'
2022-02-07T19:34:55,815   Preparing metadata (setup.py): finished with status 'done'
2022-02-07T19:34:55,823   Source in /tmp/pip-wheel-fpx4rayr/mclumix_98d7ecff101e438ca55f3c8ec3a935d7 has version 0.0.0.0.6, which satisfies requirement mclumix==0.0.0.0.6 from https://files.pythonhosted.org/packages/22/b8/855d42e9e76d167af8843290aaea8140f13958f88570eb79599c0efac0ae/mclumix-0.0.0.0.6.tar.gz#sha256=237b6357b288919a3e45e2451ee5f96d830cadceb1b13ca771c259de18eac14d
2022-02-07T19:34:55,825   Removed mclumix==0.0.0.0.6 from https://files.pythonhosted.org/packages/22/b8/855d42e9e76d167af8843290aaea8140f13958f88570eb79599c0efac0ae/mclumix-0.0.0.0.6.tar.gz#sha256=237b6357b288919a3e45e2451ee5f96d830cadceb1b13ca771c259de18eac14d from build tracker '/tmp/pip-req-tracker-of6ajrsu'
2022-02-07T19:34:55,838 Created temporary directory: /tmp/pip-unpack-c2ojnbmf
2022-02-07T19:34:55,839 Building wheels for collected packages: mclumix
2022-02-07T19:34:55,849   Created temporary directory: /tmp/pip-wheel-5iqfvtbs
2022-02-07T19:34:55,850   Building wheel for mclumix (setup.py): started
2022-02-07T19:34:55,850   Destination directory: /tmp/pip-wheel-5iqfvtbs
2022-02-07T19:34:55,851   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-fpx4rayr/mclumix_98d7ecff101e438ca55f3c8ec3a935d7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-fpx4rayr/mclumix_98d7ecff101e438ca55f3c8ec3a935d7/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-5iqfvtbs
2022-02-07T19:34:57,453   Warning: 'keywords' should be a list, got type 'tuple'
2022-02-07T19:34:57,897   running bdist_wheel
2022-02-07T19:34:57,906   running build
2022-02-07T19:34:57,907   running build_py
2022-02-07T19:34:57,915   creating build
2022-02-07T19:34:57,916   creating build/lib
2022-02-07T19:34:57,917   creating build/lib/mclumi
2022-02-07T19:34:57,919   copying mclumi/Path.py -> build/lib/mclumi
2022-02-07T19:34:57,922   copying mclumi/Main.py -> build/lib/mclumi
2022-02-07T19:34:57,926   copying mclumi/__init__.py -> build/lib/mclumi
2022-02-07T19:34:57,932   creating build/lib/mclumi/align
2022-02-07T19:34:57,933   copying mclumi/align/Write.py -> build/lib/mclumi/align
2022-02-07T19:34:57,937   copying mclumi/align/Read.py -> build/lib/mclumi/align
2022-02-07T19:34:57,940   copying mclumi/align/__init__.py -> build/lib/mclumi/align
2022-02-07T19:34:57,944   copying mclumi/align/BundlePos.py -> build/lib/mclumi/align
2022-02-07T19:34:57,948   creating build/lib/mclumi/network
2022-02-07T19:34:57,950   copying mclumi/network/Edge.py -> build/lib/mclumi/network
2022-02-07T19:34:57,956   copying mclumi/network/CC.py -> build/lib/mclumi/network
2022-02-07T19:34:57,960   copying mclumi/network/Adjacency.py -> build/lib/mclumi/network
2022-02-07T19:34:57,964   copying mclumi/network/__init__.py -> build/lib/mclumi/network
2022-02-07T19:34:57,969   creating build/lib/mclumi/util
2022-02-07T19:34:57,970   copying mclumi/util/Writer.py -> build/lib/mclumi/util
2022-02-07T19:34:57,973   copying mclumi/util/Console.py -> build/lib/mclumi/util
2022-02-07T19:34:57,977   copying mclumi/util/Number.py -> build/lib/mclumi/util
2022-02-07T19:34:57,980   copying mclumi/util/Single.py -> build/lib/mclumi/util
2022-02-07T19:34:57,983   copying mclumi/util/Folder.py -> build/lib/mclumi/util
2022-02-07T19:34:57,986   copying mclumi/util/Reader.py -> build/lib/mclumi/util
2022-02-07T19:34:57,990   copying mclumi/util/__init__.py -> build/lib/mclumi/util
2022-02-07T19:34:57,994   copying mclumi/util/Hamming.py -> build/lib/mclumi/util
2022-02-07T19:34:57,999   creating build/lib/mclumi/trim
2022-02-07T19:34:58,000   copying mclumi/trim/UMIRuleOut.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,003   copying mclumi/trim/Filter.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,007   copying mclumi/trim/Template.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,011   copying mclumi/trim/BCRuleOut.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,014   copying mclumi/trim/SeqRuleOut.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,018   copying mclumi/trim/Fixed.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,021   copying mclumi/trim/Reader.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,024   copying mclumi/trim/__init__.py -> build/lib/mclumi/trim
2022-02-07T19:34:58,029   creating build/lib/mclumi/fastq
2022-02-07T19:34:58,030   copying mclumi/fastq/Write.py -> build/lib/mclumi/fastq
2022-02-07T19:34:58,034   copying mclumi/fastq/Read.py -> build/lib/mclumi/fastq
2022-02-07T19:34:58,040   copying mclumi/fastq/__init__.py -> build/lib/mclumi/fastq
2022-02-07T19:34:58,044   creating build/lib/mclumi/deduplicate
2022-02-07T19:34:58,046   copying mclumi/deduplicate/__init__.py -> build/lib/mclumi/deduplicate
2022-02-07T19:34:58,051   creating build/lib/mclumi/external
2022-02-07T19:34:58,052   copying mclumi/external/UMItoolsSamMethods.py -> build/lib/mclumi/external
2022-02-07T19:34:58,057   copying mclumi/external/__init__.py -> build/lib/mclumi/external
2022-02-07T19:34:58,061   creating build/lib/mclumi/plot
2022-02-07T19:34:58,062   copying mclumi/plot/Graph.py -> build/lib/mclumi/plot
2022-02-07T19:34:58,065   copying mclumi/plot/__init__.py -> build/lib/mclumi/plot
2022-02-07T19:34:58,072   creating build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,074   copying mclumi/deduplicate/monomer/DedupBasic.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,079   copying mclumi/deduplicate/monomer/Build_test.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,083   copying mclumi/deduplicate/monomer/Cluster.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,089   copying mclumi/deduplicate/monomer/DedupPos.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,094   copying mclumi/deduplicate/monomer/Build.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,098   copying mclumi/deduplicate/monomer/Adjacency.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,101   copying mclumi/deduplicate/monomer/__init__.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,104   copying mclumi/deduplicate/monomer/Directional.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,108   copying mclumi/deduplicate/monomer/DedupSC.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,113   copying mclumi/deduplicate/monomer/DedupPos_test.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,119   copying mclumi/deduplicate/monomer/MarkovClustering.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,123   copying mclumi/deduplicate/monomer/DedupGene.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T19:34:58,129   running egg_info
2022-02-07T19:34:58,203   writing manifest file 'mclumix.egg-info/SOURCES.txt'
2022-02-07T19:34:58,230   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-02-07T19:34:58,231     setuptools.SetuptoolsDeprecationWarning,
2022-02-07T19:34:58,236   running install
2022-02-07T19:34:58,300   running install_lib
2022-02-07T19:34:58,308   creating build/bdist.linux-armv7l
2022-02-07T19:34:58,308   creating build/bdist.linux-armv7l/wheel
2022-02-07T19:34:58,312   creating build/bdist.linux-armv7l/wheel/mclumi
2022-02-07T19:34:58,314   creating build/bdist.linux-armv7l/wheel/mclumi/align
2022-02-07T19:34:58,333   creating build/bdist.linux-armv7l/wheel/mclumi/network
2022-02-07T19:34:58,352   creating build/bdist.linux-armv7l/wheel/mclumi/util
2022-02-07T19:34:58,386   creating build/bdist.linux-armv7l/wheel/mclumi/trim
2022-02-07T19:34:58,424   creating build/bdist.linux-armv7l/wheel/mclumi/fastq
2022-02-07T19:34:58,437   creating build/bdist.linux-armv7l/wheel/mclumi/deduplicate
2022-02-07T19:34:58,439   creating build/bdist.linux-armv7l/wheel/mclumi/deduplicate/monomer
2022-02-07T19:34:58,504   creating build/bdist.linux-armv7l/wheel/mclumi/external
2022-02-07T19:34:58,517   creating build/bdist.linux-armv7l/wheel/mclumi/plot
2022-02-07T19:34:58,524   running install_egg_info
2022-02-07T19:34:58,540   Copying mclumix.egg-info to build/bdist.linux-armv7l/wheel/mclumix-0.0.0.0.6-py3.7.egg-info
2022-02-07T19:34:58,562   running install_scripts
2022-02-07T19:34:59,114   Building wheel for mclumix (setup.py): finished with status 'done'
2022-02-07T19:34:59,121   Created wheel for mclumix: filename=mclumix-0.0.0.0.6-py3-none-any.whl size=75252 sha256=f3e72f12b78255065871e2f3f429029d1e120304c42dcfc6f9cb91862c3c3d3f
2022-02-07T19:34:59,122   Stored in directory: /tmp/pip-ephem-wheel-cache-a6k149ub/wheels/6b/b6/f1/c5c405b683e4111c46b411dce5eed0bd0ed77d3a6489fb12c4
2022-02-07T19:34:59,146 Successfully built mclumix
2022-02-07T19:34:59,156 Removed build tracker: '/tmp/pip-req-tracker-of6ajrsu'