2022-02-07T23:15:02,048 Created temporary directory: /tmp/pip-ephem-wheel-cache-ezl98flq 2022-02-07T23:15:02,053 Created temporary directory: /tmp/pip-req-tracker-tp7emf87 2022-02-07T23:15:02,054 Initialized build tracking at /tmp/pip-req-tracker-tp7emf87 2022-02-07T23:15:02,055 Created build tracker: /tmp/pip-req-tracker-tp7emf87 2022-02-07T23:15:02,055 Entered build tracker: /tmp/pip-req-tracker-tp7emf87 2022-02-07T23:15:02,056 Created temporary directory: /tmp/pip-wheel-2orxq14g 2022-02-07T23:15:02,121 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-02-07T23:15:02,127 2 location(s) to search for versions of indelpost: 2022-02-07T23:15:02,127 * https://pypi.org/simple/indelpost/ 2022-02-07T23:15:02,127 * https://www.piwheels.org/simple/indelpost/ 2022-02-07T23:15:02,128 Fetching project page and analyzing links: https://pypi.org/simple/indelpost/ 2022-02-07T23:15:02,129 Getting page https://pypi.org/simple/indelpost/ 2022-02-07T23:15:02,132 Found index url https://pypi.org/simple 2022-02-07T23:15:02,369 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/2c/1d/2aaf490785fed09605d1194a93f0d4c6693e0700fe2fcd9185b1aac27ef2/indelpost-0.0.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=22dd2ce3f806b04ebc5c5587736e8ee360d798fdf01d28711357185cf1703961 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,370 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/54/c1/a67da73389badb8221981f0fb0fbbbfdb7342ab8f85f905d6698c6347f6b/indelpost-0.0.2-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=90d86337c0008370f0c2752bfd1dcf1dda8bb34475cac842ed9cbb3dc0073027 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,371 Found link https://files.pythonhosted.org/packages/de/7b/8b8e90a4883daa231b77b3b20d07430734622d3dabe47f8d341f6b9ebb49/indelpost-0.0.2.tar.gz#sha256=d2cdebe02749d55eff6a4e0fbc455ac90d8e9ddc730ff5baa14b6743931797d6 (from https://pypi.org/simple/indelpost/), version: 0.0.2 2022-02-07T23:15:02,371 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/dc/d5/5e20c3069e99a36caf23bbf9ac6e0f654a23178bb7346541676872fa9bbe/indelpost-0.0.3-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=d401a2411fd0f40975c5d11ddaa1100eeb04e60f44de5fb703c8b261c5dd14b0 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,372 Found link https://files.pythonhosted.org/packages/8d/6a/e12e7e15eeb48b35ae38b9382b0e3b8853fe62c2147f13c7152c1285efe0/indelpost-0.0.3.tar.gz#sha256=15b1108f2a9382c2e0133d585e96e4f3a109de9c14ec91df7910637bb882e8cf (from https://pypi.org/simple/indelpost/), version: 0.0.3 2022-02-07T23:15:02,373 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/bf/82/58a1ee8cb0385c502afceb21d718179cbe56dd2318656de1c11f1d16af8b/indelpost-0.0.4-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=10782ed395a864d0e4d9d7bdb6b047e0d919eb6eb19b2eb38536c083aee6010e (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,373 Found link https://files.pythonhosted.org/packages/ef/04/6d459daa1e4c992bc65ee1bedd624a7c061e7026df01e2f835591a205a54/indelpost-0.0.4.tar.gz#sha256=81a6d7220973f36e1ed0b7f45a9602780b153e2c82769e77faab517ac5874095 (from https://pypi.org/simple/indelpost/), version: 0.0.4 2022-02-07T23:15:02,374 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/fc/60/d2dc04e1503d76a934265af72306fe6883bbeab466e30e4104e04565da6f/indelpost-0.0.5-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=36390346ce23d74882e6017c14789aa661b165579dc63442b62d08b84c219ca5 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,375 Found link https://files.pythonhosted.org/packages/59/c4/b639f75fe326c6712d462f6154ea6047c4774a661f00c2551fff984db194/indelpost-0.0.5.tar.gz#sha256=43d39835821c9564eed9148c529fd9833db6b3042cf259ffc69398e25cd86768 (from https://pypi.org/simple/indelpost/), version: 0.0.5 2022-02-07T23:15:02,375 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/f1/6e/26ec6199f8df542adc339cf3caebfdcfd5cdf438591aa6e7b3881b2d9682/indelpost-0.0.6-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=29b3d6634007ef21c4c88f72e1ea5594e9e7b1d04f084dfdcbc70b749394aed6 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,376 Found link https://files.pythonhosted.org/packages/82/50/d5d04f27a9317f5c24850b2388713c240a6c07fdb5f9a3cbc5b3aef6032c/indelpost-0.0.6.tar.gz#sha256=ea9a534f8f0a7dcec35a004d1f42632fe245d28d74914f226eeab262dbf84410 (from https://pypi.org/simple/indelpost/), version: 0.0.6 2022-02-07T23:15:02,376 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/ea/da/03d68b7bb51d84b8c88303fc6c7554db09bb3ec1fc6e01db8445b936bd6c/indelpost-0.0.7-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=aa1931e5f50c8d9b66f8dc512e71d923f2eef1c4c86d5c672e4d16d22334f66d (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,377 Found link https://files.pythonhosted.org/packages/97/55/92a64a3f1d8bbe3b3d326f32aeb87516e3c461ce8f44a4d09cc10de90077/indelpost-0.0.7.tar.gz#sha256=bb16d11fe858c0a3d4c8e6046961657622a4c7eaa0559bb62629eeef81a1b8f9 (from https://pypi.org/simple/indelpost/), version: 0.0.7 2022-02-07T23:15:02,378 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/33/67/ae5323d7d9c609a60fb4d425b0d8ba5299453b63b9125f35e3743636bf12/indelpost-0.1.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=f42eec0a7acc7840c14d9d3ee5c011bf1036899673ed7905ca919bfd134bd7fb (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,378 Found link https://files.pythonhosted.org/packages/ad/13/3367cfe66b9dee3034ca7f4188d61a55e7cf1817558dd1322313ea693384/indelpost-0.1.0.tar.gz#sha256=513a086552e176415620c57b048110028b926d18ae225ff3b5b6a2a826224f52 (from https://pypi.org/simple/indelpost/), version: 0.1.0 2022-02-07T23:15:02,379 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/c7/09/70c352d9d6f3bcdc410810d35d44cf66493f66c07ac996c07da53d5a6375/indelpost-0.1.2-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=b9bde1f02a9c2d379aca928fdb302d39d668205e881dca8bd3568126656cc14a (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,379 Found link https://files.pythonhosted.org/packages/28/7f/62eb40e0bdf79cc0b56bd12c4fa5598e13bbf140f44080c842d5284acc6f/indelpost-0.1.2.tar.gz#sha256=b2572871b17524491d11c82512c891c8ced26d7d4a04d5d41cf03f115c447426 (from https://pypi.org/simple/indelpost/), version: 0.1.2 2022-02-07T23:15:02,380 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/7f/a2/1341f6e0b449d1fa03df8b323c79c236ec134ed4b98808fd0e9b64083394/indelpost-0.1.3-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=fe074207ed3cfb7227e4c3eb7248ed0e790e9a6a6906dd93b48aecedeed88b6f (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,381 Found link https://files.pythonhosted.org/packages/bf/c0/fa6d273124ec3d739322db2f82410b21cfa06961e8ad74a75b4049780489/indelpost-0.1.3.tar.gz#sha256=269bce4bf476bf05c5ab3c2e785932ae4ff75524ad88215e1676ada179aa85c9 (from https://pypi.org/simple/indelpost/), version: 0.1.3 2022-02-07T23:15:02,381 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/84/b8/2960198caddb27814e86ee54022a85834c9315e08250df8210108e608832/indelpost-0.1.4-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=3d8ea641a270815ff18c4a86b00ff00489e1b1cdaced1ca61ca9cae797c4aeac (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,382 Found link https://files.pythonhosted.org/packages/8b/94/e98ddc3e8f24f3a3ac5f5ef94d4f2db0346e0a14e5cdbbdd3e1dd4a01e98/indelpost-0.1.4.tar.gz#sha256=647e20e4b777967edb981e06b6b477000112169c0a0cac15243c91869852eaf8 (from https://pypi.org/simple/indelpost/), version: 0.1.4 2022-02-07T23:15:02,382 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/5b/ad/d974f31584f0e4fede49aa915151215142af3c2a96be0169464b2d0b0948/indelpost-0.1.5-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=511b753d15748e6648d223112afddeacc040308f9bbe932e67c707c3f95ebafc (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,383 Found link https://files.pythonhosted.org/packages/1f/31/fa53ce469a6aea3029caa39b715d7eec5378b466038591b954e0f356e907/indelpost-0.1.5.tar.gz#sha256=546896754e075f0abb5bcea2d5e23039c7b3de265178a5c632955f7c53ec8a38 (from https://pypi.org/simple/indelpost/), version: 0.1.5 2022-02-07T23:15:02,384 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/46/f9/706bf8cae759e72d9da70746ef37ea6b72b746786582fc16aafe0a140d68/indelpost-0.1.6-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=e60f38ca5b74b4098685dbdfb338f4e4186ff694fd5962c3449e2d093c600c09 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,384 Found link https://files.pythonhosted.org/packages/81/75/62103326be8bd02fc0f7d11a3f20693fcb106f39e8c0c09204ec662d9c96/indelpost-0.1.6.tar.gz#sha256=ee81455d5cc6d8bb3c82e4c4ff14e5401b2c2f142a09536d6fa9b57ac95f0685 (from https://pypi.org/simple/indelpost/), version: 0.1.6 2022-02-07T23:15:02,385 Skipping link: No binaries permitted for indelpost: https://files.pythonhosted.org/packages/b1/2d/d0e5613b6228ecaadc8426369234d2f2f845ef4b0efc37eb6a9334154eb6/indelpost-0.1.7-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl#sha256=3426f3149cda97584ccd7b6e87bf8604bd026f7cb71d7153ab03a928773933f2 (from https://pypi.org/simple/indelpost/) 2022-02-07T23:15:02,385 Found link https://files.pythonhosted.org/packages/1d/49/ad1dceecb2fc74d484b251f5065c94e5206a53613d3c24384c61201d15b3/indelpost-0.1.7.tar.gz#sha256=842dffbb6eeeb4c1f6c9cc0ea18d5a97e2ea75c3571f925e984d2411c8c4624a (from https://pypi.org/simple/indelpost/), version: 0.1.7 2022-02-07T23:15:02,386 Fetching project page and analyzing links: https://www.piwheels.org/simple/indelpost/ 2022-02-07T23:15:02,387 Getting page https://www.piwheels.org/simple/indelpost/ 2022-02-07T23:15:02,389 Found index url https://www.piwheels.org/simple 2022-02-07T23:15:02,706 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.4-cp35-cp35m-linux_armv6l.whl#sha256=ef2c25b3285b57f47cb57dc92d2c4e76e2e8b5f4ab9a6d50c547bcad37e6e6f1 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,706 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.4-cp35-cp35m-linux_armv7l.whl#sha256=ef2c25b3285b57f47cb57dc92d2c4e76e2e8b5f4ab9a6d50c547bcad37e6e6f1 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,707 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.4-cp37-cp37m-linux_armv6l.whl#sha256=7c4dcb12099c6bc35dfd26fe521b219dd38b62084183feaa13ed29fa181233fa (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,707 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.4-cp37-cp37m-linux_armv7l.whl#sha256=7c4dcb12099c6bc35dfd26fe521b219dd38b62084183feaa13ed29fa181233fa (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,708 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.4-cp39-cp39-linux_armv6l.whl#sha256=845a592c16ea5f5678c909156fc09d419dd8a8235966b6af09eeb7f3741eb793 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,709 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.4-cp39-cp39-linux_armv7l.whl#sha256=845a592c16ea5f5678c909156fc09d419dd8a8235966b6af09eeb7f3741eb793 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,709 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.5-cp35-cp35m-linux_armv6l.whl#sha256=59edb19638df18b9ad3fdae765686c4cd090f3937043ceebbe65e77ae6a7bfd7 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,710 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.5-cp35-cp35m-linux_armv7l.whl#sha256=59edb19638df18b9ad3fdae765686c4cd090f3937043ceebbe65e77ae6a7bfd7 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,710 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.5-cp37-cp37m-linux_armv6l.whl#sha256=269f794fb66d4c900292eb6fa5b25d0b057697fd14a1f12bb5169d47955f1aa7 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,711 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.5-cp37-cp37m-linux_armv7l.whl#sha256=269f794fb66d4c900292eb6fa5b25d0b057697fd14a1f12bb5169d47955f1aa7 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,711 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.5-cp39-cp39-linux_armv6l.whl#sha256=a403bc49e63190edb1e4bba54049e3d4fafba9035a2b9d4050163051604a903d (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,712 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.5-cp39-cp39-linux_armv7l.whl#sha256=a403bc49e63190edb1e4bba54049e3d4fafba9035a2b9d4050163051604a903d (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,712 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.6-cp35-cp35m-linux_armv6l.whl#sha256=7231a248222b414f135d51c446aa2da0a13294d0ef11c530713bc3b0997dca4e (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,713 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.6-cp35-cp35m-linux_armv7l.whl#sha256=7231a248222b414f135d51c446aa2da0a13294d0ef11c530713bc3b0997dca4e (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,713 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.6-cp37-cp37m-linux_armv6l.whl#sha256=5c7ba07c9dd96ea153e3e4b3919bf33684afc3aaac60debd9b20170ddecfeee7 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,714 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.6-cp37-cp37m-linux_armv7l.whl#sha256=5c7ba07c9dd96ea153e3e4b3919bf33684afc3aaac60debd9b20170ddecfeee7 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,714 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.6-cp39-cp39-linux_armv6l.whl#sha256=1d58f09ba53993d1e4ca17575df06a6cd875bedcaad06fcd8eeb0b574e855054 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,715 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.6-cp39-cp39-linux_armv7l.whl#sha256=1d58f09ba53993d1e4ca17575df06a6cd875bedcaad06fcd8eeb0b574e855054 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,715 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.7-cp37-cp37m-linux_armv6l.whl#sha256=f8f424014654639e1c13d9e492648b57373af218e913d1c8b27e3ce177c22748 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,716 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.7-cp37-cp37m-linux_armv7l.whl#sha256=f8f424014654639e1c13d9e492648b57373af218e913d1c8b27e3ce177c22748 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,716 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.7-cp39-cp39-linux_armv6l.whl#sha256=e2f82fcc7ec80866dea1dd2238315693688eadef3067ef7b1f914d6850275af0 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,716 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.0.7-cp39-cp39-linux_armv7l.whl#sha256=e2f82fcc7ec80866dea1dd2238315693688eadef3067ef7b1f914d6850275af0 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,717 Skipping link: No binaries permitted for indelpost: 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https://www.piwheels.org/simple/indelpost/indelpost-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=0bf7b191441cd8e904a0535c15429fddf0d1aaffbf9d8875d3a5288b89e2f766 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,719 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=7fa7caeb896b7fc58ac14b1462a6a0a5bc7cfe304d0c2d99851dd52b322ba811 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,719 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=7fa7caeb896b7fc58ac14b1462a6a0a5bc7cfe304d0c2d99851dd52b322ba811 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,720 Skipping link: No binaries permitted for indelpost: 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https://www.piwheels.org/simple/indelpost/indelpost-0.1.3-cp37-cp37m-linux_armv7l.whl#sha256=1ae4eceba7c821e63f647d587090644e56e20794f722d32bbd1a07622bba7a6a (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,725 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.3-cp39-cp39-linux_armv6l.whl#sha256=82d4b74a5b0c08b2e6e8cdb19d8686fe91f00bc6423d776897f611b6271cb9ed (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,725 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.3-cp39-cp39-linux_armv7l.whl#sha256=82d4b74a5b0c08b2e6e8cdb19d8686fe91f00bc6423d776897f611b6271cb9ed (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,726 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.4-cp35-cp35m-linux_armv6l.whl#sha256=28d176690693a312eccf2d0193bb8356a5d1be9e94dd2f751cec5c8142cd74a1 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,726 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.4-cp35-cp35m-linux_armv7l.whl#sha256=28d176690693a312eccf2d0193bb8356a5d1be9e94dd2f751cec5c8142cd74a1 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,727 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.4-cp37-cp37m-linux_armv6l.whl#sha256=3ae4aab4bc1c19219a61dea0fee69f08102840fb72fd777bc3bea518990d61f6 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,727 Skipping link: No binaries permitted for indelpost: 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https://www.piwheels.org/simple/indelpost/indelpost-0.1.5-cp37-cp37m-linux_armv7l.whl#sha256=6bf911db05b496bfe00bf54a79466323200b1d2cbf3d8013d835bd93a998604d (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,731 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.5-cp39-cp39-linux_armv6l.whl#sha256=8e716a1cb37b6a64ba5f610942d8762b4b3fe08d9ece4918bbdb930e2511acd9 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,731 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.5-cp39-cp39-linux_armv7l.whl#sha256=8e716a1cb37b6a64ba5f610942d8762b4b3fe08d9ece4918bbdb930e2511acd9 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,732 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.6-cp35-cp35m-linux_armv6l.whl#sha256=4f3c694ada7ad26f382ba87bcc9f19a66237df3db3c4a29020812c2006d1dcdb (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,732 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.6-cp35-cp35m-linux_armv7l.whl#sha256=4f3c694ada7ad26f382ba87bcc9f19a66237df3db3c4a29020812c2006d1dcdb (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,733 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.6-cp37-cp37m-linux_armv6l.whl#sha256=b87c71c0eef4a84e4273697527aced120c3f6618c1aca00df8a7e3c298f3b893 (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,733 Skipping link: No binaries permitted for indelpost: 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https://www.piwheels.org/simple/indelpost/indelpost-0.1.7-cp35-cp35m-linux_armv6l.whl#sha256=45d522081bd999e88622b3f6853ed39d08e9329a193c2802b370b31aeea4ac1f (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,735 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.7-cp35-cp35m-linux_armv7l.whl#sha256=45d522081bd999e88622b3f6853ed39d08e9329a193c2802b370b31aeea4ac1f (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,736 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.7-cp37-cp37m-linux_armv6l.whl#sha256=3ee6dc5d8f3af8abe85b3fbd0b57bfecf62440effa5e3dec2fb2d4af5582d6cb (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,736 Skipping link: No binaries permitted for indelpost: https://www.piwheels.org/simple/indelpost/indelpost-0.1.7-cp37-cp37m-linux_armv7l.whl#sha256=3ee6dc5d8f3af8abe85b3fbd0b57bfecf62440effa5e3dec2fb2d4af5582d6cb (from https://www.piwheels.org/simple/indelpost/) 2022-02-07T23:15:02,737 Skipping link: not a file: https://www.piwheels.org/simple/indelpost/ 2022-02-07T23:15:02,737 Skipping link: not a file: https://pypi.org/simple/indelpost/ 2022-02-07T23:15:02,786 Given no hashes to check 1 links for project 'indelpost': discarding no candidates 2022-02-07T23:15:02,828 Collecting indelpost==0.1.7 2022-02-07T23:15:02,831 Created temporary directory: /tmp/pip-unpack-v8i6a80b 2022-02-07T23:15:02,923 Downloading indelpost-0.1.7.tar.gz (957 kB) 2022-02-07T23:15:03,936 Added indelpost==0.1.7 from https://files.pythonhosted.org/packages/1d/49/ad1dceecb2fc74d484b251f5065c94e5206a53613d3c24384c61201d15b3/indelpost-0.1.7.tar.gz#sha256=842dffbb6eeeb4c1f6c9cc0ea18d5a97e2ea75c3571f925e984d2411c8c4624a to build tracker '/tmp/pip-req-tracker-tp7emf87' 2022-02-07T23:15:03,952 Created temporary directory: /tmp/pip-build-env-max36x59 2022-02-07T23:15:03,972 Created temporary directory: /tmp/pip-standalone-pip-pvye0jgz 2022-02-07T23:15:05,794 Installing build dependencies: started 2022-02-07T23:15:05,795 Running command /usr/bin/python3 /tmp/pip-standalone-pip-pvye0jgz/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-max36x59/overlay --no-warn-script-location -v --no-binary indelpost --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- setuptools wheel 'pysam>=0.15.0' 'numpy>=1.16.0' 'cython>=0.29.12' 2022-02-07T23:15:14,858 Using pip 21.3.1 from /tmp/pip-standalone-pip-pvye0jgz/__env_pip__.zip/pip (python 3.9) 2022-02-07T23:15:15,706 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-02-07T23:15:20,906 Collecting setuptools 2022-02-07T23:15:21,147 Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.8.1-py3-none-any.whl (1.1 MB) 2022-02-07T23:15:21,909 Collecting wheel 2022-02-07T23:15:21,945 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-02-07T23:15:22,741 Collecting pysam>=0.15.0 2022-02-07T23:15:22,786 Downloading https://www.piwheels.org/simple/pysam/pysam-0.18.0-cp39-cp39-linux_armv7l.whl (11.6 MB) 2022-02-07T23:15:31,223 Collecting numpy>=1.16.0 2022-02-07T23:15:33,711 Using cached https://www.piwheels.org/simple/numpy/numpy-1.22.2-cp39-cp39-linux_armv7l.whl (12.9 MB) 2022-02-07T23:15:39,970 Collecting cython>=0.29.12 2022-02-07T23:15:41,004 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.27-cp39-cp39-linux_armv7l.whl (5.0 MB) 2022-02-07T23:15:44,957 Installing collected packages: wheel, setuptools, pysam, numpy, cython 2022-02-07T23:15:45,242 Creating /tmp/pip-build-env-max36x59/overlay/bin 2022-02-07T23:15:45,245 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/wheel to 755 2022-02-07T23:16:10,237 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/f2py to 755 2022-02-07T23:16:10,241 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/f2py3 to 755 2022-02-07T23:16:10,245 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/f2py3.9 to 755 2022-02-07T23:16:16,451 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/cygdb to 755 2022-02-07T23:16:16,454 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/cython to 755 2022-02-07T23:16:16,456 changing mode of /tmp/pip-build-env-max36x59/overlay/bin/cythonize to 755 2022-02-07T23:16:16,511 Successfully installed cython-0.29.27 numpy-1.22.2 pysam-0.18.0 setuptools-60.8.1 wheel-0.37.1 2022-02-07T23:16:16,698 WARNING: You are using pip version 21.3.1; however, version 22.0.3 is available. 2022-02-07T23:16:16,699 You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command. 2022-02-07T23:16:17,252 Installing build dependencies: finished with status 'done' 2022-02-07T23:16:17,274 Getting requirements to build wheel: started 2022-02-07T23:16:17,275 Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmph965kknx 2022-02-07T23:17:17,190 Compiling indelpost/variant.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,192 Compiling indelpost/utilities.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,192 Compiling indelpost/pileup.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,192 Compiling indelpost/varaln.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,193 Compiling indelpost/contig.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,193 Compiling indelpost/local_reference.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,193 Compiling indelpost/softclip.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,194 Compiling indelpost/localn.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,194 Compiling indelpost/gappedaln.pyx because it depends on /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/libchtslib.pxd. 2022-02-07T23:17:17,194 [1/9] Cythonizing indelpost/contig.pyx 2022-02-07T23:17:17,195 [2/9] Cythonizing indelpost/gappedaln.pyx 2022-02-07T23:17:17,195 [3/9] Cythonizing indelpost/local_reference.pyx 2022-02-07T23:17:17,195 [4/9] Cythonizing indelpost/localn.pyx 2022-02-07T23:17:17,196 [5/9] Cythonizing indelpost/pileup.pyx 2022-02-07T23:17:17,196 [6/9] Cythonizing indelpost/softclip.pyx 2022-02-07T23:17:17,196 [7/9] Cythonizing indelpost/utilities.pyx 2022-02-07T23:17:17,196 [8/9] Cythonizing indelpost/varaln.pyx 2022-02-07T23:17:17,197 [9/9] Cythonizing indelpost/variant.pyx 2022-02-07T23:17:17,618 running egg_info 2022-02-07T23:17:17,672 writing manifest file 'indelpost.egg-info/SOURCES.txt' 2022-02-07T23:17:18,775 Getting requirements to build wheel: finished with status 'done' 2022-02-07T23:17:18,798 Created temporary directory: /tmp/pip-modern-metadata-wy8v1g39 2022-02-07T23:17:18,805 Preparing metadata (pyproject.toml): started 2022-02-07T23:17:18,806 Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpnrozy_ji 2022-02-07T23:17:23,397 running dist_info 2022-02-07T23:17:23,424 creating /tmp/pip-modern-metadata-wy8v1g39/indelpost.egg-info 2022-02-07T23:17:23,437 writing manifest file '/tmp/pip-modern-metadata-wy8v1g39/indelpost.egg-info/SOURCES.txt' 2022-02-07T23:17:23,467 writing manifest file '/tmp/pip-modern-metadata-wy8v1g39/indelpost.egg-info/SOURCES.txt' 2022-02-07T23:17:23,849 Preparing metadata (pyproject.toml): finished with status 'done' 2022-02-07T23:17:23,860 Source in /tmp/pip-wheel-2orxq14g/indelpost_3add716a331749cda4334b761a82001c has version 0.1.7, which satisfies requirement indelpost==0.1.7 from https://files.pythonhosted.org/packages/1d/49/ad1dceecb2fc74d484b251f5065c94e5206a53613d3c24384c61201d15b3/indelpost-0.1.7.tar.gz#sha256=842dffbb6eeeb4c1f6c9cc0ea18d5a97e2ea75c3571f925e984d2411c8c4624a 2022-02-07T23:17:23,862 Removed indelpost==0.1.7 from https://files.pythonhosted.org/packages/1d/49/ad1dceecb2fc74d484b251f5065c94e5206a53613d3c24384c61201d15b3/indelpost-0.1.7.tar.gz#sha256=842dffbb6eeeb4c1f6c9cc0ea18d5a97e2ea75c3571f925e984d2411c8c4624a from build tracker '/tmp/pip-req-tracker-tp7emf87' 2022-02-07T23:17:23,871 Created temporary directory: /tmp/pip-unpack-bmll8vfh 2022-02-07T23:17:23,872 Building wheels for collected packages: indelpost 2022-02-07T23:17:23,880 Created temporary directory: /tmp/pip-wheel-hcc34_v1 2022-02-07T23:17:23,881 Destination directory: /tmp/pip-wheel-hcc34_v1 2022-02-07T23:17:23,886 Building wheel for indelpost (pyproject.toml): started 2022-02-07T23:17:23,887 Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmp81p0yia6 2022-02-07T23:17:28,359 running bdist_wheel 2022-02-07T23:17:28,367 running build 2022-02-07T23:17:28,368 running build_py 2022-02-07T23:17:28,375 creating build 2022-02-07T23:17:28,376 creating build/lib.linux-armv7l-3.9 2022-02-07T23:17:28,377 creating build/lib.linux-armv7l-3.9/indelpost 2022-02-07T23:17:28,379 copying indelpost/version.py -> build/lib.linux-armv7l-3.9/indelpost 2022-02-07T23:17:28,382 copying indelpost/consensus.py -> build/lib.linux-armv7l-3.9/indelpost 2022-02-07T23:17:28,387 copying indelpost/alleles.py -> build/lib.linux-armv7l-3.9/indelpost 2022-02-07T23:17:28,391 copying indelpost/__init__.py -> build/lib.linux-armv7l-3.9/indelpost 2022-02-07T23:17:28,395 running build_ext 2022-02-07T23:17:28,409 creating build/temp.linux-armv7l-3.9 2022-02-07T23:17:28,410 creating build/temp.linux-armv7l-3.9/indelpost 2022-02-07T23:17:28,411 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/variant.c -o build/temp.linux-armv7l-3.9/indelpost/variant.o 2022-02-07T23:17:29,275 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:17:29,276 from indelpost/variant.c:718: 2022-02-07T23:17:29,276 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:17:29,277 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:17:29,277 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:17:29,278 | ^ 2022-02-07T23:17:31,778 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:17:31,779 from indelpost/variant.c:728: 2022-02-07T23:17:31,779 At top level: 2022-02-07T23:17:31,780 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:17:31,780 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:17:31,781 | ^~~~~~~~~ 2022-02-07T23:17:31,781 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:17:31,781 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:17:31,782 | ^~~~~~~~~~~ 2022-02-07T23:17:31,782 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:17:31,783 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:17:31,783 | ^~~~~~~~~~ 2022-02-07T23:17:31,783 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:17:31,784 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:17:31,784 | ^~~~~~~~~ 2022-02-07T23:17:31,784 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:17:31,785 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:17:31,785 | ^~~~~~~~~~~~ 2022-02-07T23:17:31,785 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:17:31,785 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:17:31,786 | ^~~~~~~~~~~~ 2022-02-07T23:17:31,786 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:17:31,786 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:17:31,787 | ^~~~~~~~~~ 2022-02-07T23:17:31,787 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:17:31,787 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:17:31,788 | ^~~~~~~~~ 2022-02-07T23:17:31,788 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:17:31,788 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:17:31,789 | ^~~~~~~~~ 2022-02-07T23:17:31,789 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:17:31,789 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:17:31,790 | ^~~~~~~~~~~~ 2022-02-07T23:17:31,790 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:17:31,790 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:17:31,791 | ^~~~~~~~~~ 2022-02-07T23:17:31,791 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:17:31,791 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:17:31,792 | ^~~~~~~~~ 2022-02-07T23:18:10,679 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/variant.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/variant.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:18:11,081 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/utilities.c -o build/temp.linux-armv7l-3.9/indelpost/utilities.o 2022-02-07T23:18:11,878 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:18:11,879 from indelpost/utilities.c:718: 2022-02-07T23:18:11,879 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:18:11,880 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:18:11,881 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:18:11,881 | ^ 2022-02-07T23:18:16,558 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:18:16,559 from indelpost/utilities.c:728: 2022-02-07T23:18:16,560 At top level: 2022-02-07T23:18:16,561 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:18:16,561 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:18:16,562 | ^~~~~~~~~ 2022-02-07T23:18:16,562 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:18:16,562 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:18:16,563 | ^~~~~~~~~~~ 2022-02-07T23:18:16,563 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:18:16,563 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:18:16,564 | ^~~~~~~~~~ 2022-02-07T23:18:16,564 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:18:16,564 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:18:16,565 | ^~~~~~~~~ 2022-02-07T23:18:16,565 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:18:16,566 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:18:16,566 | ^~~~~~~~~~~~ 2022-02-07T23:18:16,566 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:18:16,567 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:18:16,567 | ^~~~~~~~~~~~ 2022-02-07T23:18:16,567 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:18:16,568 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:18:16,568 | ^~~~~~~~~~ 2022-02-07T23:18:16,568 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:18:16,568 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:18:16,569 | ^~~~~~~~~ 2022-02-07T23:18:16,569 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:18:16,569 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:18:16,570 | ^~~~~~~~~ 2022-02-07T23:18:16,570 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:18:16,570 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:18:16,571 | ^~~~~~~~~~~~ 2022-02-07T23:18:16,571 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:18:16,571 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:18:16,572 | ^~~~~~~~~~ 2022-02-07T23:18:16,572 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:18:16,572 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:18:16,573 | ^~~~~~~~~ 2022-02-07T23:19:11,909 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/utilities.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/utilities.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:19:12,370 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/pileup.c -o build/temp.linux-armv7l-3.9/indelpost/pileup.o 2022-02-07T23:19:13,210 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:19:13,210 from indelpost/pileup.c:718: 2022-02-07T23:19:13,211 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:19:13,211 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:19:13,212 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:19:13,212 | ^ 2022-02-07T23:19:18,031 At top level: 2022-02-07T23:19:18,044 indelpost/pileup.c:8494:18: warning: ‘__pyx_f_9indelpost_6pileup_leftalign_cigar’ defined but not used [-Wunused-function] 2022-02-07T23:19:18,044 8494 | static PyObject *__pyx_f_9indelpost_6pileup_leftalign_cigar(PyObject *__pyx_v_cigarstring, struct __pyx_obj_9indelpost_7variant_Variant *__pyx_v_target, int __pyx_v_read_start) { 2022-02-07T23:19:18,045 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-07T23:19:18,048 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:19:18,048 from indelpost/pileup.c:728: 2022-02-07T23:19:18,048 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:19:18,049 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:19:18,049 | ^~~~~~~~~ 2022-02-07T23:19:18,049 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:19:18,050 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:19:18,050 | ^~~~~~~~~~~ 2022-02-07T23:19:18,050 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:19:18,051 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:19:18,051 | ^~~~~~~~~~ 2022-02-07T23:19:18,052 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:19:18,052 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:19:18,052 | ^~~~~~~~~ 2022-02-07T23:19:18,053 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:19:18,053 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:19:18,053 | ^~~~~~~~~~~~ 2022-02-07T23:19:18,054 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:19:18,054 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:19:18,055 | ^~~~~~~~~~~~ 2022-02-07T23:19:18,055 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:19:18,055 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:19:18,055 | ^~~~~~~~~~ 2022-02-07T23:19:18,056 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:19:18,056 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:19:18,056 | ^~~~~~~~~ 2022-02-07T23:19:18,057 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:19:18,057 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:19:18,058 | ^~~~~~~~~ 2022-02-07T23:19:18,058 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:19:18,058 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:19:18,058 | ^~~~~~~~~~~~ 2022-02-07T23:19:18,059 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:19:18,059 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:19:18,059 | ^~~~~~~~~~ 2022-02-07T23:19:18,060 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:19:18,060 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:19:18,060 | ^~~~~~~~~ 2022-02-07T23:20:47,526 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/pileup.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/pileup.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:20:48,031 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/varaln.c -o build/temp.linux-armv7l-3.9/indelpost/varaln.o 2022-02-07T23:20:48,872 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:20:48,872 from indelpost/varaln.c:718: 2022-02-07T23:20:48,873 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:20:48,873 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:20:48,874 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:20:48,874 | ^ 2022-02-07T23:20:53,026 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:20:53,027 from indelpost/varaln.c:728: 2022-02-07T23:20:53,027 At top level: 2022-02-07T23:20:53,029 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:20:53,030 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:20:53,030 | ^~~~~~~~~ 2022-02-07T23:20:53,030 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:20:53,031 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:20:53,031 | ^~~~~~~~~~~ 2022-02-07T23:20:53,031 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:20:53,032 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:20:53,032 | ^~~~~~~~~~ 2022-02-07T23:20:53,032 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:20:53,033 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:20:53,033 | ^~~~~~~~~ 2022-02-07T23:20:53,034 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:20:53,034 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:20:53,034 | ^~~~~~~~~~~~ 2022-02-07T23:20:53,035 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:20:53,035 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:20:53,035 | ^~~~~~~~~~~~ 2022-02-07T23:20:53,036 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:20:53,036 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:20:53,036 | ^~~~~~~~~~ 2022-02-07T23:20:53,036 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:20:53,037 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:20:53,037 | ^~~~~~~~~ 2022-02-07T23:20:53,040 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:20:53,040 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:20:53,041 | ^~~~~~~~~ 2022-02-07T23:20:53,041 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:20:53,042 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:20:53,042 | ^~~~~~~~~~~~ 2022-02-07T23:20:53,042 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:20:53,043 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:20:53,043 | ^~~~~~~~~~ 2022-02-07T23:20:53,043 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:20:53,043 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:20:53,044 | ^~~~~~~~~ 2022-02-07T23:22:00,617 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/varaln.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/varaln.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:22:01,079 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/contig.c -o build/temp.linux-armv7l-3.9/indelpost/contig.o 2022-02-07T23:22:01,910 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:22:01,910 from indelpost/contig.c:718: 2022-02-07T23:22:01,910 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:22:01,911 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:22:01,911 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:22:01,912 | ^ 2022-02-07T23:22:04,357 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:22:04,358 from indelpost/contig.c:728: 2022-02-07T23:22:04,358 At top level: 2022-02-07T23:22:04,360 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:22:04,361 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:22:04,361 | ^~~~~~~~~ 2022-02-07T23:22:04,361 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:22:04,362 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:22:04,362 | ^~~~~~~~~~~ 2022-02-07T23:22:04,362 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:04,363 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:04,363 | ^~~~~~~~~~ 2022-02-07T23:22:04,363 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:04,363 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:04,364 | ^~~~~~~~~ 2022-02-07T23:22:04,365 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:22:04,365 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:22:04,365 | ^~~~~~~~~~~~ 2022-02-07T23:22:04,365 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:22:04,366 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:22:04,366 | ^~~~~~~~~~~~ 2022-02-07T23:22:04,366 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:04,367 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:04,367 | ^~~~~~~~~~ 2022-02-07T23:22:04,367 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:04,367 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:04,368 | ^~~~~~~~~ 2022-02-07T23:22:04,370 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:22:04,370 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:22:04,371 | ^~~~~~~~~ 2022-02-07T23:22:04,371 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:22:04,371 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:22:04,372 | ^~~~~~~~~~~~ 2022-02-07T23:22:04,372 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:04,373 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:04,373 | ^~~~~~~~~~ 2022-02-07T23:22:04,373 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:04,374 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:04,374 | ^~~~~~~~~ 2022-02-07T23:22:35,850 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/contig.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/contig.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:22:36,202 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/local_reference.c -o build/temp.linux-armv7l-3.9/indelpost/local_reference.o 2022-02-07T23:22:36,981 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:22:36,981 from indelpost/local_reference.c:718: 2022-02-07T23:22:36,982 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:22:36,982 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:22:36,983 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:22:36,983 | ^ 2022-02-07T23:22:37,687 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:22:37,687 from indelpost/local_reference.c:728: 2022-02-07T23:22:37,688 At top level: 2022-02-07T23:22:37,690 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:22:37,690 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:22:37,690 | ^~~~~~~~~ 2022-02-07T23:22:37,691 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:22:37,691 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:22:37,691 | ^~~~~~~~~~~ 2022-02-07T23:22:37,692 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:37,692 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:37,692 | ^~~~~~~~~~ 2022-02-07T23:22:37,693 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:37,693 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:37,693 | ^~~~~~~~~ 2022-02-07T23:22:37,694 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:22:37,694 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:22:37,695 | ^~~~~~~~~~~~ 2022-02-07T23:22:37,695 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:22:37,695 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:22:37,695 | ^~~~~~~~~~~~ 2022-02-07T23:22:37,696 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:37,696 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:37,696 | ^~~~~~~~~~ 2022-02-07T23:22:37,697 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:37,697 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:37,697 | ^~~~~~~~~ 2022-02-07T23:22:37,700 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:22:37,700 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:22:37,701 | ^~~~~~~~~ 2022-02-07T23:22:37,701 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:22:37,701 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:22:37,702 | ^~~~~~~~~~~~ 2022-02-07T23:22:37,702 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:37,702 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:37,703 | ^~~~~~~~~~ 2022-02-07T23:22:37,703 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:37,703 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:37,703 | ^~~~~~~~~ 2022-02-07T23:22:45,980 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/local_reference.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/local_reference.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:22:46,240 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/softclip.c -o build/temp.linux-armv7l-3.9/indelpost/softclip.o 2022-02-07T23:22:47,038 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:22:47,039 from indelpost/softclip.c:718: 2022-02-07T23:22:47,039 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:22:47,040 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:22:47,040 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:22:47,040 | ^ 2022-02-07T23:22:47,879 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:22:47,879 from indelpost/softclip.c:728: 2022-02-07T23:22:47,880 At top level: 2022-02-07T23:22:47,881 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:22:47,882 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:22:47,882 | ^~~~~~~~~ 2022-02-07T23:22:47,882 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:22:47,883 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:22:47,883 | ^~~~~~~~~~~ 2022-02-07T23:22:47,883 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:47,884 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:47,884 | ^~~~~~~~~~ 2022-02-07T23:22:47,884 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:47,884 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:47,885 | ^~~~~~~~~ 2022-02-07T23:22:47,886 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:22:47,886 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:22:47,886 | ^~~~~~~~~~~~ 2022-02-07T23:22:47,887 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:22:47,887 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:22:47,887 | ^~~~~~~~~~~~ 2022-02-07T23:22:47,887 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:47,888 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:47,888 | ^~~~~~~~~~ 2022-02-07T23:22:47,888 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:47,889 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:47,889 | ^~~~~~~~~ 2022-02-07T23:22:47,899 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:22:47,899 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:22:47,900 | ^~~~~~~~~ 2022-02-07T23:22:47,900 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:22:47,901 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:22:47,901 | ^~~~~~~~~~~~ 2022-02-07T23:22:47,901 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:22:47,902 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:22:47,902 | ^~~~~~~~~~ 2022-02-07T23:22:47,902 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:22:47,903 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:22:47,903 | ^~~~~~~~~ 2022-02-07T23:22:59,140 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/softclip.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/softclip.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:22:59,409 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/localn.c -o build/temp.linux-armv7l-3.9/indelpost/localn.o 2022-02-07T23:23:00,218 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:23:00,218 from indelpost/localn.c:718: 2022-02-07T23:23:00,219 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:23:00,219 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:23:00,220 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:23:00,220 | ^ 2022-02-07T23:23:02,274 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:23:02,274 from indelpost/localn.c:728: 2022-02-07T23:23:02,274 At top level: 2022-02-07T23:23:02,277 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:23:02,277 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:23:02,278 | ^~~~~~~~~ 2022-02-07T23:23:02,278 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:23:02,278 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:23:02,278 | ^~~~~~~~~~~ 2022-02-07T23:23:02,279 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:23:02,279 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:23:02,280 | ^~~~~~~~~~ 2022-02-07T23:23:02,280 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:23:02,281 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:23:02,281 | ^~~~~~~~~ 2022-02-07T23:23:02,282 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:23:02,282 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:23:02,282 | ^~~~~~~~~~~~ 2022-02-07T23:23:02,283 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:23:02,283 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:23:02,283 | ^~~~~~~~~~~~ 2022-02-07T23:23:02,284 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:23:02,284 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:23:02,284 | ^~~~~~~~~~ 2022-02-07T23:23:02,285 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:23:02,285 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:23:02,285 | ^~~~~~~~~ 2022-02-07T23:23:02,286 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:23:02,286 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:23:02,286 | ^~~~~~~~~ 2022-02-07T23:23:02,287 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:23:02,287 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:23:02,287 | ^~~~~~~~~~~~ 2022-02-07T23:23:02,288 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:23:02,288 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:23:02,288 | ^~~~~~~~~~ 2022-02-07T23:23:02,288 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:23:02,289 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:23:02,289 | ^~~~~~~~~ 2022-02-07T23:23:40,181 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/localn.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/localn.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:23:40,542 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib -I/tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/samtools -I/usr/include/python3.9 -c indelpost/gappedaln.c -o build/temp.linux-armv7l-3.9/indelpost/gappedaln.o 2022-02-07T23:23:41,330 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/htslib_util.h:4, 2022-02-07T23:23:41,331 from indelpost/gappedaln.c:718: 2022-02-07T23:23:41,331 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h: In function ‘sam_format_aux1’: 2022-02-07T23:23:41,332 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/sam.h:1540:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-02-07T23:23:41,332 1540 | if ((end - s) / sub_type_size < n) 2022-02-07T23:23:41,332 | ^ 2022-02-07T23:23:42,761 In file included from /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:4, 2022-02-07T23:23:42,762 from indelpost/gappedaln.c:728: 2022-02-07T23:23:42,762 At top level: 2022-02-07T23:23:42,764 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:185:12: warning: ‘kseq_read’ defined but not used [-Wunused-function] 2022-02-07T23:23:42,764 185 | SCOPE int kseq_read(kseq_t *seq) \ 2022-02-07T23:23:42,765 | ^~~~~~~~~ 2022-02-07T23:23:42,765 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:238:2: note: in expansion of macro ‘__KSEQ_READ’ 2022-02-07T23:23:42,765 238 | __KSEQ_READ(SCOPE) 2022-02-07T23:23:42,766 | ^~~~~~~~~~~ 2022-02-07T23:23:42,766 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:23:42,766 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:23:42,766 | ^~~~~~~~~~ 2022-02-07T23:23:42,767 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:23:42,767 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:23:42,767 | ^~~~~~~~~ 2022-02-07T23:23:42,768 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:171:13: warning: ‘kseq_destroy’ defined but not used [-Wunused-function] 2022-02-07T23:23:42,769 171 | SCOPE void kseq_destroy(kseq_t *ks) \ 2022-02-07T23:23:42,769 | ^~~~~~~~~~~~ 2022-02-07T23:23:42,769 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:23:42,770 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:23:42,770 | ^~~~~~~~~~~~ 2022-02-07T23:23:42,770 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:23:42,771 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:23:42,771 | ^~~~~~~~~~ 2022-02-07T23:23:42,771 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:23:42,772 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:23:42,772 | ^~~~~~~~~ 2022-02-07T23:23:42,772 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:165:16: warning: ‘kseq_init’ defined but not used [-Wunused-function] 2022-02-07T23:23:42,773 165 | SCOPE kseq_t *kseq_init(type_t fd) \ 2022-02-07T23:23:42,773 | ^~~~~~~~~ 2022-02-07T23:23:42,773 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:237:2: note: in expansion of macro ‘__KSEQ_BASIC’ 2022-02-07T23:23:42,774 237 | __KSEQ_BASIC(SCOPE, type_t) \ 2022-02-07T23:23:42,774 | ^~~~~~~~~~~~ 2022-02-07T23:23:42,774 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’ 2022-02-07T23:23:42,775 240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) 2022-02-07T23:23:42,775 | ^~~~~~~~~~ 2022-02-07T23:23:42,775 /tmp/pip-build-env-max36x59/overlay/lib/python3.9/site-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’ 2022-02-07T23:23:42,776 9 | KSEQ_INIT(BGZF *, bgzf_read) 2022-02-07T23:23:42,776 | ^~~~~~~~~ 2022-02-07T23:24:13,500 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/indelpost/gappedaln.o -L/usr/lib -o build/lib.linux-armv7l-3.9/indelpost/gappedaln.cpython-39-arm-linux-gnueabihf.so 2022-02-07T23:24:13,831 running install 2022-02-07T23:24:13,895 running install_lib 2022-02-07T23:24:13,903 creating build/bdist.linux-armv7l 2022-02-07T23:24:13,904 creating build/bdist.linux-armv7l/wheel 2022-02-07T23:24:13,908 creating build/bdist.linux-armv7l/wheel/indelpost 2022-02-07T23:24:14,460 running install_egg_info 2022-02-07T23:24:14,506 running egg_info 2022-02-07T23:24:14,549 writing manifest file 'indelpost.egg-info/SOURCES.txt' 2022-02-07T23:24:14,553 Copying indelpost.egg-info to build/bdist.linux-armv7l/wheel/indelpost-0.1.7-py3.9.egg-info 2022-02-07T23:24:14,573 running install_scripts 2022-02-07T23:24:20,470 Building wheel for indelpost (pyproject.toml): finished with status 'done' 2022-02-07T23:24:20,704 Created wheel for indelpost: filename=indelpost-0.1.7-cp39-cp39-linux_armv7l.whl size=3662470 sha256=0ce1dfc2ebbdf77714be1d25a5acb833a500dbf5f95a3539b6c4fa56d0938eed 2022-02-07T23:24:20,705 Stored in directory: /tmp/pip-ephem-wheel-cache-ezl98flq/wheels/24/48/65/56099dec05f08c7ac81345c2cb40a9032db375d1fda6b758d8 2022-02-07T23:24:20,728 Successfully built indelpost 2022-02-07T23:24:20,964 Removed build tracker: '/tmp/pip-req-tracker-tp7emf87'