2022-02-11T09:42:07,564 Created temporary directory: /tmp/pip-ephem-wheel-cache-xlnoue8y 2022-02-11T09:42:07,570 Created temporary directory: /tmp/pip-req-tracker-gbchj_ng 2022-02-11T09:42:07,570 Initialized build tracking at /tmp/pip-req-tracker-gbchj_ng 2022-02-11T09:42:07,571 Created build tracker: /tmp/pip-req-tracker-gbchj_ng 2022-02-11T09:42:07,571 Entered build tracker: /tmp/pip-req-tracker-gbchj_ng 2022-02-11T09:42:07,572 Created temporary directory: /tmp/pip-wheel-ymmyfhnw 2022-02-11T09:42:07,637 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-02-11T09:42:07,642 2 location(s) to search for versions of modbampy: 2022-02-11T09:42:07,642 * https://pypi.org/simple/modbampy/ 2022-02-11T09:42:07,642 * https://www.piwheels.org/simple/modbampy/ 2022-02-11T09:42:07,643 Fetching project page and analyzing links: https://pypi.org/simple/modbampy/ 2022-02-11T09:42:07,644 Getting page https://pypi.org/simple/modbampy/ 2022-02-11T09:42:07,648 Found index url https://pypi.org/simple 2022-02-11T09:42:07,890 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/cb/92/01d1ec72f52cd9d18713cfd5c7bb064ea70fe031fe238e265112fcd3beb2/modbampy-0.2.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=46d4c2c5add64b1c7fba490404ff463b777a1d3f57fe0c645aa5c4563f441263 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,891 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/35/0e/280e5b17b0bc460560075c77da9bd9299b6b7dcb0c061740a94f8b23c90e/modbampy-0.2.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=68b2f71492f7c491ce50d7652b203b4e1acfb5a39bee3d636caa1e812a2bc912 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,891 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/01/ef/99be5f576ff7db0f873bc7713921bffd2742fc5ccd6ab381f35a99c41854/modbampy-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=52b6a20f924a029863c27bd2b9bb77174f19ae40f77902730d00befdfdd266f0 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,892 Found link https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 (from https://pypi.org/simple/modbampy/), version: 0.2.1 2022-02-11T09:42:07,893 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c2/ce/c3ebc2ce18ca8939e9e0710df6a8fea088c82aa4ca37e9f1eba32ddb5bc2/modbampy-0.2.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=811cfd1d021a6d0f8efdf8a88648896836c21cc9d3b0b11f7101c360967892d3 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,893 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/eb/10/c44dbeeee9dccadf0568f16f4a6776fca103e9a34ebb1e9fdcdeb7cddd7d/modbampy-0.2.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2686f294fed887deedff963eaea42dbff5c9bdc218986c311fd46325bbea57f4 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,894 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/ce/d8/aa825e1ffd01346e323289eac83ed091d3927e86f4b621335c1eecef6090/modbampy-0.2.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c1bfda8e2105867ea207b701959dce3fca32f528cdc00a32bde9e48dca18be22 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,894 Found link https://files.pythonhosted.org/packages/4f/e8/ba726f9225c971fa4c82d0bb1ac45735bce2a1894f1d735e03f175f61147/modbampy-0.2.2.tar.gz#sha256=ec77ba3ee07e4e03d8b8d4341ceb15c775f0c89fa059fcacbf9f1ce58260924b (from https://pypi.org/simple/modbampy/), version: 0.2.2 2022-02-11T09:42:07,895 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c0/20/e32f4cb98c5dd7b421f1e9f9800fb3e617b333b82fff52e96d4f8761257e/modbampy-0.3.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2083b5d79443f47978846e3ecca3d0567b0c5d473b4fa4b3fe6e9802dbebcdf9 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,895 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/69/5d/abe04396191bfc1cbee3fed85295fcde0c2524778f76c6bf432bdf84644f/modbampy-0.3.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9bd2e72a022f594d5afa043cea69876ddfd7b5db2a1901e5ba2952dd2b1b9cdc (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,896 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/68/3e/26333f7e1a7d0bcd46b80085cd49f68aa614515f6786eb52e7273c17f610/modbampy-0.3.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9092bcd8b34e47177b63869610d462424d5d9bb863306c3e35da784081126fd1 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,896 Found link https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed (from https://pypi.org/simple/modbampy/), version: 0.3.0 2022-02-11T09:42:07,897 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/6b/df/13ca551e50bcd1ad0d4f9d065aff6678e6abd34c01afcbe509b754829c3c/modbampy-0.3.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=a63027e365006da18b0af107c7085b80f5f571c9a0f611cdb0981a1ca35f92f6 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,898 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c1/a3/75e6a684a93e4e1e0d84495b67adc77d0a03964eb66823357eb80b8f3686/modbampy-0.3.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=e998fc3ec582ef7442f3a91bbd39e84a38a212ac13bcba74c0d23f6fac4e82b9 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,898 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/1c/af/f164876eee34ef60a2d31ca8d853bd9bfbd6b93b397826abda65c953f486/modbampy-0.3.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=bb5d1fbf9c85af16f985ae1ae3b83002921d642b87ffe6c4ac2723df5d2f3e04 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,899 Found link https://files.pythonhosted.org/packages/15/10/6e0cde7c584add268b4382bd2ad6220e0161c0656da73aae80a063ba6a9b/modbampy-0.3.1.tar.gz#sha256=a078dd752832e119df50ee56da5f5db85e1b3687c77405e9fae30a6ed79c00f2 (from https://pypi.org/simple/modbampy/), version: 0.3.1 2022-02-11T09:42:07,899 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/4d/d1/a88f41743c9eb30cf35a72461ee544ba1b105549a7b93ce84b582ca85c96/modbampy-0.3.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c03575e1e1c9cf53d18d8637b174f502a2cc01f0af51551d98183cfa35acff0a (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,900 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/3d/98/23189a4f83b1fc043c0505e651033a096be1e140486d7ecc9079b917db96/modbampy-0.3.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=14c2d2597e5fad3ef39154cfc3f87994b56fa8150be1c1a0f2e3bea0f6a2e11f (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,900 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/b3/71/39abcdef209e85545ab1b1ca3423531f186aa6675dc4bffe031309f48136/modbampy-0.3.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=4814269447add79ef669ee30e5f995cd25b51c279a32efe5404500d6f6281613 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,901 Found link https://files.pythonhosted.org/packages/4c/5e/370d94b0b9cf28ae1287a254b34cbf8028bdf7063aa4a65ed3b45b852c69/modbampy-0.3.2.tar.gz#sha256=9bcd2a2c9570bc1f9d6fe4ffbbd6f2257d270d0bfa7a26123c48db6fdb0940cf (from https://pypi.org/simple/modbampy/), version: 0.3.2 2022-02-11T09:42:07,901 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/59/1e/2f31980907d634aa927b1fd4d8ef136308c85f88cee2c34583e70289b3f4/modbampy-0.4.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=adbabcf5d1047f590463ee0b7a7f55a937326bf497432d499a945dbc24cd4d07 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,902 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/f6/3a/7236f1fb940d811752c7b447c1fd94106106337e62cf5fb94cd4fd0196fd/modbampy-0.4.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=5041aca7d1ccded0788bf4ac88412c5283ce21b678ed112c266179bf56322cbf (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,903 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/55/3a/2f1c1861205216020f62a6f5086926e29040bd80f7f95292d07488b540e4/modbampy-0.4.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=1998ead6346a8dc11f25580a923da07be9a8e582af7895f6365889f60085355f (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,903 Found link https://files.pythonhosted.org/packages/0a/d7/6ca78462e83d645337b954991a7ba1fbb915b140879d2ea092d8f926a949/modbampy-0.4.0.tar.gz#sha256=e8a4fc807c544d73ef8c82d501ee2397e25c0380df5f96e9a6028158cfb773df (from https://pypi.org/simple/modbampy/), version: 0.4.0 2022-02-11T09:42:07,904 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/3b/62/98dda7380670fa1b74dfe60399ecc12acaaa848e40100b1d4cad315e3c28/modbampy-0.4.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=4aad235cea014113aadc0a03c5ecb84d4956b7d42115eb061a46bd2f4fdad84a (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,904 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/87/00/1a51c04db7046e379ce8056116620a739464d09cfe38b6f91c9d2b5613cc/modbampy-0.4.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=d4338755f9ea676ca2c271a9e3bf85f3b70dbc864d34f13f418de9a9b7130fc1 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,905 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/e7/b5/4718677c3cde1042b0cad1fcea37da450cfd8cc3a0f8baec525495f57caa/modbampy-0.4.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=de75f136277cd2eb7a323e768070800d7d8e10dfc830706f3f70424bfbfca2b8 (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,905 Found link https://files.pythonhosted.org/packages/80/91/9f8865064a549b5b403ce3ce946449ab4dac13a1f4950fb357612935c42e/modbampy-0.4.1.tar.gz#sha256=3b463cf6f7e26127ff1af6e82955c0514291346ab2b65048289065ce318385a1 (from https://pypi.org/simple/modbampy/), version: 0.4.1 2022-02-11T09:42:07,906 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c6/c1/348c4fce5b1d278d65ddc1f14b65885b261d52b0655d25c44b90f8dc1a2e/modbampy-0.4.3-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=a967a5db1b2f4d1f7a325ffb2fe1aac6f86af7e3050ca867003d658dae02d2ac (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,906 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/87/84/9c578f110a448153cfbbc04d4611064af47d2b74fe54acaf8923c79e5150/modbampy-0.4.3-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9c14f0d4bbf52e93a20ac276305e100e95896796c89c9d37ea77d22c1557670a (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,907 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/9b/31/fec77c51e7c7eaaf10bfefdebcb6c57283dc90fe953592986dca2cdbf7a4/modbampy-0.4.3-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=6f1a63056424ee32960cbabe563c9d7214af014c6ff6e80159131ba9675e12de (from https://pypi.org/simple/modbampy/) 2022-02-11T09:42:07,907 Found link https://files.pythonhosted.org/packages/bd/0f/3417df5c541643ac66a21a207a6377a66cae8043031a63e1aefb88e3afe2/modbampy-0.4.3.tar.gz#sha256=e10438483ac845b2ba4a59551f7db496805999844cb13226d21efe1160357ec7 (from https://pypi.org/simple/modbampy/), version: 0.4.3 2022-02-11T09:42:07,908 Fetching project page and analyzing links: https://www.piwheels.org/simple/modbampy/ 2022-02-11T09:42:07,909 Getting page https://www.piwheels.org/simple/modbampy/ 2022-02-11T09:42:07,911 Found index url https://www.piwheels.org/simple 2022-02-11T09:42:08,133 Skipping link: not a file: https://www.piwheels.org/simple/modbampy/ 2022-02-11T09:42:08,134 Skipping link: not a file: https://pypi.org/simple/modbampy/ 2022-02-11T09:42:08,180 Given no hashes to check 1 links for project 'modbampy': discarding no candidates 2022-02-11T09:42:08,222 Collecting modbampy==0.4.3 2022-02-11T09:42:08,225 Created temporary directory: /tmp/pip-unpack-xjmhxwr4 2022-02-11T09:42:08,320 Downloading modbampy-0.4.3.tar.gz (811 kB) 2022-02-11T09:42:09,655 Added modbampy==0.4.3 from https://files.pythonhosted.org/packages/bd/0f/3417df5c541643ac66a21a207a6377a66cae8043031a63e1aefb88e3afe2/modbampy-0.4.3.tar.gz#sha256=e10438483ac845b2ba4a59551f7db496805999844cb13226d21efe1160357ec7 to build tracker '/tmp/pip-req-tracker-gbchj_ng' 2022-02-11T09:42:09,657 Running setup.py (path:/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py) egg_info for package modbampy 2022-02-11T09:42:09,658 Created temporary directory: /tmp/pip-pip-egg-info-444z1a6p 2022-02-11T09:42:09,659 Preparing metadata (setup.py): started 2022-02-11T09:42:09,659 Running command python setup.py egg_info 2022-02-11T09:42:12,096 /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing. 2022-02-11T09:42:12,098 warnings.warn("String literal found in cdef() or type source. " 2022-02-11T09:42:12,435 running egg_info 2022-02-11T09:42:12,440 creating /tmp/pip-pip-egg-info-444z1a6p/modbampy.egg-info 2022-02-11T09:42:12,457 writing manifest file '/tmp/pip-pip-egg-info-444z1a6p/modbampy.egg-info/SOURCES.txt' 2022-02-11T09:42:12,485 warning: no files found matching 'LICENSE.md' 2022-02-11T09:42:12,520 no previously-included directories found matching 'htslib/test' 2022-02-11T09:42:12,522 no previously-included directories found matching 'htslib/htscodecs/tests' 2022-02-11T09:42:12,525 no previously-included directories found matching 'build' 2022-02-11T09:42:12,527 no previously-included directories found matching 'docs' 2022-02-11T09:42:12,547 writing manifest file '/tmp/pip-pip-egg-info-444z1a6p/modbampy.egg-info/SOURCES.txt' 2022-02-11T09:42:12,707 Preparing metadata (setup.py): finished with status 'done' 2022-02-11T09:42:12,716 Source in /tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c has version 0.4.3, which satisfies requirement modbampy==0.4.3 from https://files.pythonhosted.org/packages/bd/0f/3417df5c541643ac66a21a207a6377a66cae8043031a63e1aefb88e3afe2/modbampy-0.4.3.tar.gz#sha256=e10438483ac845b2ba4a59551f7db496805999844cb13226d21efe1160357ec7 2022-02-11T09:42:12,718 Removed modbampy==0.4.3 from https://files.pythonhosted.org/packages/bd/0f/3417df5c541643ac66a21a207a6377a66cae8043031a63e1aefb88e3afe2/modbampy-0.4.3.tar.gz#sha256=e10438483ac845b2ba4a59551f7db496805999844cb13226d21efe1160357ec7 from build tracker '/tmp/pip-req-tracker-gbchj_ng' 2022-02-11T09:42:12,728 Created temporary directory: /tmp/pip-unpack-4vvqmp7m 2022-02-11T09:42:12,729 Building wheels for collected packages: modbampy 2022-02-11T09:42:12,737 Created temporary directory: /tmp/pip-wheel-ywm29kml 2022-02-11T09:42:12,737 Building wheel for modbampy (setup.py): started 2022-02-11T09:42:12,738 Destination directory: /tmp/pip-wheel-ywm29kml 2022-02-11T09:42:12,738 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ywm29kml 2022-02-11T09:42:14,986 /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing. 2022-02-11T09:42:14,987 warnings.warn("String literal found in cdef() or type source. " 2022-02-11T09:42:15,337 running bdist_wheel 2022-02-11T09:42:15,346 running build 2022-02-11T09:42:15,346 running build_py 2022-02-11T09:42:15,354 creating build 2022-02-11T09:42:15,354 creating build/lib.linux-armv7l-3.9 2022-02-11T09:42:15,355 creating build/lib.linux-armv7l-3.9/modbampy 2022-02-11T09:42:15,357 copying modbampy/__init__.py -> build/lib.linux-armv7l-3.9/modbampy 2022-02-11T09:42:15,362 running build_ext 2022-02-11T09:42:15,363 creating build/temp.linux-armv7l-3.9 2022-02-11T09:42:15,419 Compiling htslib using Makefile 2022-02-11T09:42:15,471 Compiling libhts.a 2022-02-11T09:42:15,473 cd htslib/ \ 2022-02-11T09:42:15,474 && autoheader \ 2022-02-11T09:42:15,474 && autoconf \ 2022-02-11T09:42:15,474 && CFLAGS="-fpic -msse3 -O3 -std=c99 " ./configure \ 2022-02-11T09:42:15,475 && make -j 4 2022-02-11T09:42:20,059 checking for gcc... gcc 2022-02-11T09:42:20,337 checking whether the C compiler works... no 2022-02-11T09:42:20,354 configure: error: in `/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/htslib': 2022-02-11T09:42:20,355 configure: error: C compiler cannot create executables 2022-02-11T09:42:20,356 See `config.log' for more details 2022-02-11T09:42:20,511 make: *** [Makefile:30: htslib/libhts.a] Error 77 2022-02-11T09:42:20,514 Traceback (most recent call last): 2022-02-11T09:42:20,514 File "", line 1, in 2022-02-11T09:42:20,515 File "/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py", line 61, in 2022-02-11T09:42:20,516 setup( 2022-02-11T09:42:20,516 File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 155, in setup 2022-02-11T09:42:20,517 return distutils.core.setup(**attrs) 2022-02-11T09:42:20,517 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/core.py", line 148, in setup 2022-02-11T09:42:20,518 return run_commands(dist) 2022-02-11T09:42:20,519 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/core.py", line 163, in run_commands 2022-02-11T09:42:20,519 dist.run_commands() 2022-02-11T09:42:20,520 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/dist.py", line 967, in run_commands 2022-02-11T09:42:20,521 self.run_command(cmd) 2022-02-11T09:42:20,522 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command 2022-02-11T09:42:20,524 cmd_obj.run() 2022-02-11T09:42:20,524 File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run 2022-02-11T09:42:20,525 self.run_command('build') 2022-02-11T09:42:20,526 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command 2022-02-11T09:42:20,526 self.distribution.run_command(command) 2022-02-11T09:42:20,527 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command 2022-02-11T09:42:20,529 cmd_obj.run() 2022-02-11T09:42:20,529 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/command/build.py", line 135, in run 2022-02-11T09:42:20,530 self.run_command(cmd_name) 2022-02-11T09:42:20,530 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command 2022-02-11T09:42:20,531 self.distribution.run_command(command) 2022-02-11T09:42:20,531 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command 2022-02-11T09:42:20,533 cmd_obj.run() 2022-02-11T09:42:20,534 File "/usr/lib/python3/dist-packages/cffi/setuptools_ext.py", line 144, in run 2022-02-11T09:42:20,544 base_class.run(self) 2022-02-11T09:42:20,545 File "/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py", line 57, in run 2022-02-11T09:42:20,545 self.execute(compile_hts, [], 'Compiling htslib using Makefile') 2022-02-11T09:42:20,545 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py", line 335, in execute 2022-02-11T09:42:20,546 util.execute(func, args, msg, dry_run=self.dry_run) 2022-02-11T09:42:20,547 File "/usr/local/lib/python3.9/dist-packages/setuptools/_distutils/util.py", line 374, in execute 2022-02-11T09:42:20,555 func(*args) 2022-02-11T09:42:20,555 File "/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py", line 55, in compile_hts 2022-02-11T09:42:20,556 subprocess.check_call(['make', os.path.join('htslib', 'libhts.a'), 'pymod.a']) 2022-02-11T09:42:20,556 File "/usr/lib/python3.9/subprocess.py", line 373, in check_call 2022-02-11T09:42:20,557 raise CalledProcessError(retcode, cmd) 2022-02-11T09:42:20,557 subprocess.CalledProcessError: Command '['make', 'htslib/libhts.a', 'pymod.a']' returned non-zero exit status 2. 2022-02-11T09:42:20,741 Building wheel for modbampy (setup.py): finished with status 'error' 2022-02-11T09:42:20,742 ERROR: Failed building wheel for modbampy 2022-02-11T09:42:20,744 Running setup.py clean for modbampy 2022-02-11T09:42:20,745 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ymmyfhnw/modbampy_06447e05a0a44830b9dd9ccc97812b2c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2022-02-11T09:42:23,001 /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing. 2022-02-11T09:42:23,003 warnings.warn("String literal found in cdef() or type source. " 2022-02-11T09:42:23,306 running clean 2022-02-11T09:42:23,310 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2022-02-11T09:42:23,312 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2022-02-11T09:42:23,316 'build/bdist.linux-armv7l' does not exist -- can't clean it 2022-02-11T09:42:23,316 'build/scripts-3.9' does not exist -- can't clean it 2022-02-11T09:42:23,474 Failed to build modbampy 2022-02-11T09:42:23,475 ERROR: Failed to build one or more wheels 2022-02-11T09:42:23,477 Exception information: 2022-02-11T09:42:23,477 Traceback (most recent call last): 2022-02-11T09:42:23,477 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper 2022-02-11T09:42:23,477 status = run_func(*args) 2022-02-11T09:42:23,477 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-02-11T09:42:23,477 return func(self, options, args) 2022-02-11T09:42:23,477 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 175, in run 2022-02-11T09:42:23,477 raise CommandError("Failed to build one or more wheels") 2022-02-11T09:42:23,477 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2022-02-11T09:42:23,483 Removed build tracker: '/tmp/pip-req-tracker-gbchj_ng'