2022-02-17T17:42:19,627 Created temporary directory: /tmp/pip-ephem-wheel-cache-c10o9sbl 2022-02-17T17:42:19,632 Created temporary directory: /tmp/pip-req-tracker-dq4181br 2022-02-17T17:42:19,633 Initialized build tracking at /tmp/pip-req-tracker-dq4181br 2022-02-17T17:42:19,634 Created build tracker: /tmp/pip-req-tracker-dq4181br 2022-02-17T17:42:19,634 Entered build tracker: /tmp/pip-req-tracker-dq4181br 2022-02-17T17:42:19,635 Created temporary directory: /tmp/pip-wheel-15aw2oz6 2022-02-17T17:42:19,707 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-02-17T17:42:19,716 2 location(s) to search for versions of hic-straw: 2022-02-17T17:42:19,716 * https://pypi.org/simple/hic-straw/ 2022-02-17T17:42:19,716 * https://www.piwheels.org/simple/hic-straw/ 2022-02-17T17:42:19,717 Fetching project page and analyzing links: https://pypi.org/simple/hic-straw/ 2022-02-17T17:42:19,718 Getting page https://pypi.org/simple/hic-straw/ 2022-02-17T17:42:19,721 Found index url https://pypi.org/simple 2022-02-17T17:42:19,866 Found link https://files.pythonhosted.org/packages/58/12/da9e47221a82011797d19832a2dbc8843b0a96c483874f17010b4921c993/hic-straw-0.0.6.tar.gz#sha256=bc79be50b076a3820852cd0e3b0d743df719b78d49510bf43ac63241f03ab81a (from https://pypi.org/simple/hic-straw/), version: 0.0.6 2022-02-17T17:42:19,867 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/a4/89/1fc2a4e6d9b5379ac4ea0add62658d519095d22a8fef6feb32d1f6d04341/hic_straw-0.0.6-py3-none-any.whl#sha256=fd355fddfb43bb7a152125200a96a959bbe2fa3e4f5e1d41d0af8f27ebecf69e (from https://pypi.org/simple/hic-straw/) 2022-02-17T17:42:19,868 Found link https://files.pythonhosted.org/packages/b4/b5/1784dd8b56f1c3242e4876a816515a453bfb302177900ba89315240e2d69/hic-straw-1.0.0.0.tar.gz#sha256=8fdf3405d344d1555be9b6bb399d13a4dc8ee267f861ab7d324635d873b7a244 (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.0.0.0 2022-02-17T17:42:19,869 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/f4/64/b77b8acee62ce4088fde83fea0b45b61ac273f676453fc551a1e2402f1df/hic_straw-1.0.0.0-cp38-cp38-macosx_10_9_x86_64.whl#sha256=5ef82d45c47d4f761528efdb91cb478e68e179cbf2d18dfb5e4f3d596e0d6307 (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:19,870 Found link https://files.pythonhosted.org/packages/33/d1/0cb9b1ea2021664d748177878ab9aaa3d6a87e5ab96c2579cf229477baa8/hic-straw-1.0.0.1.tar.gz#sha256=f96e1e1879f1264bb3ca040e11a3f6d8d1cc7ad231d8452dd4231613eb94ddc1 (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.0.0.1 2022-02-17T17:42:19,871 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/0f/27/74d140215ca8b246971566707e35c6865dd2076d59a1dcba4b21d20aed7f/hic_straw-1.0.0.1-cp38-cp38-macosx_10_9_x86_64.whl#sha256=52282d8ca9ed91b121baf08a511bfae34548bd1f96aafb6a98c1ea4403837bf4 (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:19,872 Found link https://files.pythonhosted.org/packages/4e/98/5e25a075010114b063044296dcca74be78b27c94deb282b661c2c55f667e/hic-straw-1.1.0.tar.gz#sha256=2403037a7a674a7b42e33cee0878b1c21100bd0634eca13ac34697aca2c843c4 (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.1.0 2022-02-17T17:42:19,872 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/ed/b6/9dd021f8ae8744255035c5eddcd68478db957480d3674ceb00abe95bc28d/hic_straw-1.1.0-cp310-cp310-macosx_10_9_x86_64.whl#sha256=1a7d7b79b46151b0ad6b07ffade0a062d526e4a33aff98a61871e409f3775e23 (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:19,873 Found link https://files.pythonhosted.org/packages/10/91/7678a69e8b1b3ff5a0aa603d3d81794a095db4aeb089574acc0ec78e768a/hic-straw-1.1.2.tar.gz#sha256=a2e9ffeb057b63bfb00d70f1713231f2e4b082129774f582d2547e43dac27f2b (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.1.2 2022-02-17T17:42:19,874 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/06/95/4601e73dfae01c423e39139874f8ac02a767d75b7e9dfb271d8e53abaa78/hic_straw-1.1.2-cp39-cp39-macosx_10_9_x86_64.whl#sha256=60fd3ac1768e19140dff2be082a03ce58a3d46afb49ab6aa2d768b3cec5c846a (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:19,875 Fetching project page and analyzing links: https://www.piwheels.org/simple/hic-straw/ 2022-02-17T17:42:19,876 Getting page https://www.piwheels.org/simple/hic-straw/ 2022-02-17T17:42:19,878 Found index url https://www.piwheels.org/simple 2022-02-17T17:42:20,109 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-0.0.6-py3-none-any.whl#sha256=fd355fddfb43bb7a152125200a96a959bbe2fa3e4f5e1d41d0af8f27ebecf69e (from https://www.piwheels.org/simple/hic-straw/) 2022-02-17T17:42:20,110 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp35-cp35m-linux_armv6l.whl#sha256=b24cdecc8100c133f9261ac5922e102b9a6a9604610045fbc3b7ab87e592b669 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,110 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp35-cp35m-linux_armv7l.whl#sha256=b24cdecc8100c133f9261ac5922e102b9a6a9604610045fbc3b7ab87e592b669 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,111 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp37-cp37m-linux_armv6l.whl#sha256=cd52040cb7e390fc7ff2e576aced504ee8675b5936b490e479327fab793a39ce (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,111 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp37-cp37m-linux_armv7l.whl#sha256=cd52040cb7e390fc7ff2e576aced504ee8675b5936b490e479327fab793a39ce (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,112 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp39-cp39-linux_armv6l.whl#sha256=63b9a8b712b0ad252026eb358d561833eba65c4c0977a99570646a02ed9351be (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,112 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp39-cp39-linux_armv7l.whl#sha256=63b9a8b712b0ad252026eb358d561833eba65c4c0977a99570646a02ed9351be (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,113 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp35-cp35m-linux_armv6l.whl#sha256=4aa0ae3fcd730523ab35a0839eb5dcd428e0606a267b5f103709447d42289b32 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,113 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp35-cp35m-linux_armv7l.whl#sha256=4aa0ae3fcd730523ab35a0839eb5dcd428e0606a267b5f103709447d42289b32 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,114 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp37-cp37m-linux_armv6l.whl#sha256=dbb1fad14d61d1428f96999f9013aaf4a1dd78ca5259eb429aebaada9ff108c2 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,114 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=dbb1fad14d61d1428f96999f9013aaf4a1dd78ca5259eb429aebaada9ff108c2 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,115 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp39-cp39-linux_armv6l.whl#sha256=d7d53b7818cd2a1951de14440a79520320d9cb53dcc2d58b35c105769c3393b2 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,115 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp39-cp39-linux_armv7l.whl#sha256=d7d53b7818cd2a1951de14440a79520320d9cb53dcc2d58b35c105769c3393b2 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,116 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=97994388aaa8a2f58eed70e4be30ce67b19fbf9b2c32bcd33fbe53bea71863f4 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,116 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=97994388aaa8a2f58eed70e4be30ce67b19fbf9b2c32bcd33fbe53bea71863f4 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,117 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=071e6c31e8ad157969fbca812d327a246df45e9cf813889e24346ab1af0625aa (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,117 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=071e6c31e8ad157969fbca812d327a246df45e9cf813889e24346ab1af0625aa (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,118 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=0eacf81b7657d3d11dffce499da4a15512e9a211db9b692ff93d5242e82ee321 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,118 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=0eacf81b7657d3d11dffce499da4a15512e9a211db9b692ff93d5242e82ee321 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,119 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.2-cp35-cp35m-linux_armv6l.whl#sha256=cdc929c0682f1cb32fa67bbbccd80278d0bbdcccb25ab7332fb1d584671431dd (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,119 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.2-cp35-cp35m-linux_armv7l.whl#sha256=cdc929c0682f1cb32fa67bbbccd80278d0bbdcccb25ab7332fb1d584671431dd (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,120 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.2-cp37-cp37m-linux_armv6l.whl#sha256=bda895b99c0f729a3a32e55d9b8c5ab979b7e1d422b2ebe8b986d74f3212cc6c (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,120 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.1.2-cp37-cp37m-linux_armv7l.whl#sha256=bda895b99c0f729a3a32e55d9b8c5ab979b7e1d422b2ebe8b986d74f3212cc6c (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2022-02-17T17:42:20,121 Skipping link: not a file: https://www.piwheels.org/simple/hic-straw/ 2022-02-17T17:42:20,121 Skipping link: not a file: https://pypi.org/simple/hic-straw/ 2022-02-17T17:42:20,167 Given no hashes to check 1 links for project 'hic-straw': discarding no candidates 2022-02-17T17:42:20,209 Collecting hic-straw==1.1.2 2022-02-17T17:42:20,213 Created temporary directory: /tmp/pip-unpack-7mi9tu61 2022-02-17T17:42:20,310 Downloading hic-straw-1.1.2.tar.gz (17 kB) 2022-02-17T17:42:20,391 Added hic-straw==1.1.2 from https://files.pythonhosted.org/packages/10/91/7678a69e8b1b3ff5a0aa603d3d81794a095db4aeb089574acc0ec78e768a/hic-straw-1.1.2.tar.gz#sha256=a2e9ffeb057b63bfb00d70f1713231f2e4b082129774f582d2547e43dac27f2b to build tracker '/tmp/pip-req-tracker-dq4181br' 2022-02-17T17:42:20,392 Running setup.py (path:/tmp/pip-wheel-15aw2oz6/hic-straw_a45da5092ea848ca939821d3ae3423e5/setup.py) egg_info for package hic-straw 2022-02-17T17:42:20,393 Created temporary directory: /tmp/pip-pip-egg-info-2tdn6s9v 2022-02-17T17:42:20,394 Preparing metadata (setup.py): started 2022-02-17T17:42:20,396 Running command python setup.py egg_info 2022-02-17T17:42:22,800 running egg_info 2022-02-17T17:42:22,807 creating /tmp/pip-pip-egg-info-2tdn6s9v/hic_straw.egg-info 2022-02-17T17:42:22,823 writing manifest file '/tmp/pip-pip-egg-info-2tdn6s9v/hic_straw.egg-info/SOURCES.txt' 2022-02-17T17:42:22,851 writing manifest file '/tmp/pip-pip-egg-info-2tdn6s9v/hic_straw.egg-info/SOURCES.txt' 2022-02-17T17:42:22,985 Preparing metadata (setup.py): finished with status 'done' 2022-02-17T17:42:22,996 Source in /tmp/pip-wheel-15aw2oz6/hic-straw_a45da5092ea848ca939821d3ae3423e5 has version 1.1.2, which satisfies requirement hic-straw==1.1.2 from https://files.pythonhosted.org/packages/10/91/7678a69e8b1b3ff5a0aa603d3d81794a095db4aeb089574acc0ec78e768a/hic-straw-1.1.2.tar.gz#sha256=a2e9ffeb057b63bfb00d70f1713231f2e4b082129774f582d2547e43dac27f2b 2022-02-17T17:42:22,998 Removed hic-straw==1.1.2 from https://files.pythonhosted.org/packages/10/91/7678a69e8b1b3ff5a0aa603d3d81794a095db4aeb089574acc0ec78e768a/hic-straw-1.1.2.tar.gz#sha256=a2e9ffeb057b63bfb00d70f1713231f2e4b082129774f582d2547e43dac27f2b from build tracker '/tmp/pip-req-tracker-dq4181br' 2022-02-17T17:42:23,011 Created temporary directory: /tmp/pip-unpack-_012zlhi 2022-02-17T17:42:23,012 Building wheels for collected packages: hic-straw 2022-02-17T17:42:23,021 Created temporary directory: /tmp/pip-wheel-bb2itcml 2022-02-17T17:42:23,022 Building wheel for hic-straw (setup.py): started 2022-02-17T17:42:23,024 Destination directory: /tmp/pip-wheel-bb2itcml 2022-02-17T17:42:23,024 Running command python setup.py bdist_wheel 2022-02-17T17:42:25,328 running bdist_wheel 2022-02-17T17:42:25,336 running build 2022-02-17T17:42:25,337 running build_ext 2022-02-17T17:42:25,359 creating tmp 2022-02-17T17:42:25,360 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmp9s2mnbqu.cpp -o tmp/tmp9s2mnbqu.o -std=c++14 2022-02-17T17:42:25,544 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpcveb0ga3.cpp -o tmp/tmpcveb0ga3.o -fvisibility=hidden 2022-02-17T17:42:25,732 creating build 2022-02-17T17:42:25,733 creating build/temp.linux-armv7l-3.9 2022-02-17T17:42:25,734 creating build/temp.linux-armv7l-3.9/src 2022-02-17T17:42:25,736 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c src/straw.cpp -o build/temp.linux-armv7l-3.9/src/straw.o -DVERSION_INFO=\"1.1.2\" -std=c++14 -fvisibility=hidden 2022-02-17T17:42:35,658 src/straw.cpp: In function ‘bool readFooter(std::istream&, int64_t, int32_t, int32_t, int32_t, const string&, const string&, const string&, int32_t, int64_t&, indexEntry&, indexEntry&, std::vector&)’: 2022-02-17T17:42:35,659 src/straw.cpp:388:17: warning: unused variable ‘nBytes’ [-Wunused-variable] 2022-02-17T17:42:35,660 388 | int64_t nBytes = readInt64FromFile(fin); 2022-02-17T17:42:35,660 | ^~~~~~ 2022-02-17T17:42:35,661 src/straw.cpp:390:17: warning: unused variable ‘nBytes’ [-Wunused-variable] 2022-02-17T17:42:35,661 390 | int32_t nBytes = readInt32FromFile(fin); 2022-02-17T17:42:35,661 | ^~~~~~ 2022-02-17T17:42:35,667 src/straw.cpp:403:17: warning: unused variable ‘sizeinbytes’ [-Wunused-variable] 2022-02-17T17:42:35,667 403 | int32_t sizeinbytes = readInt32FromFile(fin); 2022-02-17T17:42:35,668 | ^~~~~~~~~~~ 2022-02-17T17:42:35,803 src/straw.cpp: In function ‘std::map readMatrixHttp(CURL*, int64_t, const string&, int32_t, float&, int32_t&, int32_t&)’: 2022-02-17T17:42:35,803 src/straw.cpp:606:13: warning: unused variable ‘c1’ [-Wunused-variable] 2022-02-17T17:42:35,804 606 | int32_t c1 = readInt32FromFile(bufin); 2022-02-17T17:42:35,804 | ^~ 2022-02-17T17:42:35,805 src/straw.cpp:607:13: warning: unused variable ‘c2’ [-Wunused-variable] 2022-02-17T17:42:35,805 607 | int32_t c2 = readInt32FromFile(bufin); 2022-02-17T17:42:35,805 | ^~ 2022-02-17T17:42:35,807 src/straw.cpp: In function ‘std::map readMatrix(std::istream&, int64_t, const string&, int32_t, float&, int32_t&, int32_t&)’: 2022-02-17T17:42:35,808 src/straw.cpp:634:13: warning: unused variable ‘c1’ [-Wunused-variable] 2022-02-17T17:42:35,808 634 | int32_t c1 = readInt32FromFile(fin); 2022-02-17T17:42:35,808 | ^~ 2022-02-17T17:42:35,809 src/straw.cpp:635:13: warning: unused variable ‘c2’ [-Wunused-variable] 2022-02-17T17:42:35,809 635 | int32_t c2 = readInt32FromFile(fin); 2022-02-17T17:42:35,809 | ^~ 2022-02-17T17:43:00,192 In file included from /usr/include/c++/10/bits/stl_algo.h:61, 2022-02-17T17:43:00,193 from /usr/include/c++/10/algorithm:62, 2022-02-17T17:43:00,193 from src/straw.cpp:36: 2022-02-17T17:43:00,193 /usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-02-17T17:43:00,194 /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:00,194 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2022-02-17T17:43:00,195 | ^~~~~~~~~~~~~ 2022-02-17T17:43:11,543 In file included from /usr/include/c++/10/vector:72, 2022-02-17T17:43:11,544 from src/straw.cpp:32: 2022-02-17T17:43:11,544 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-02-17T17:43:11,545 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-02-17T17:43:11,545 426 | vector<_Tp, _Alloc>:: 2022-02-17T17:43:11,546 | ^~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:11,626 In file included from /usr/include/c++/10/vector:67, 2022-02-17T17:43:11,627 from src/straw.cpp:32: 2022-02-17T17:43:11,627 /usr/include/c++/10/bits/stl_vector.h: In function ‘void populateVectorWithFloats(std::istream&, std::vector&, int64_t)’: 2022-02-17T17:43:11,627 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:11,628 1198 | _M_realloc_insert(end(), __x); 2022-02-17T17:43:11,628 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-02-17T17:43:11,673 /usr/include/c++/10/bits/stl_vector.h: In function ‘void populateVectorWithDoubles(std::istream&, std::vector&, int64_t)’: 2022-02-17T17:43:11,674 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:11,674 1198 | _M_realloc_insert(end(), __x); 2022-02-17T17:43:11,674 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-02-17T17:43:11,726 /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector sliceVector(std::vector&, int64_t, int64_t)’: 2022-02-17T17:43:11,727 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:11,727 1198 | _M_realloc_insert(end(), __x); 2022-02-17T17:43:11,727 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-02-17T17:43:13,806 In file included from /usr/include/c++/10/vector:72, 2022-02-17T17:43:13,806 from src/straw.cpp:32: 2022-02-17T17:43:13,807 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-02-17T17:43:13,807 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-02-17T17:43:13,807 426 | vector<_Tp, _Alloc>:: 2022-02-17T17:43:13,808 | ^~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:13,808 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-02-17T17:43:13,906 In file included from /usr/include/c++/10/vector:67, 2022-02-17T17:43:13,906 from src/straw.cpp:32: 2022-02-17T17:43:13,906 /usr/include/c++/10/bits/stl_vector.h: In function ‘void rollingMedian(std::vector&, std::vector&, int32_t)’: 2022-02-17T17:43:13,907 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:13,907 1198 | _M_realloc_insert(end(), __x); 2022-02-17T17:43:13,907 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-02-17T17:43:13,908 In file included from /usr/include/c++/10/vector:72, 2022-02-17T17:43:13,908 from src/straw.cpp:32: 2022-02-17T17:43:13,908 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:13,909 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-02-17T17:43:13,909 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:15,223 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {chromosome}; _Tp = chromosome; _Alloc = std::allocator]’: 2022-02-17T17:43:15,224 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-02-17T17:43:15,224 426 | vector<_Tp, _Alloc>:: 2022-02-17T17:43:15,225 | ^~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:15,225 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-02-17T17:43:15,436 /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector HiCFile::getChromosomes()’: 2022-02-17T17:43:15,437 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-02-17T17:43:15,437 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-02-17T17:43:15,438 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:16,206 In file included from /usr/include/c++/10/map:60, 2022-02-17T17:43:16,206 from src/straw.cpp:28: 2022-02-17T17:43:16,207 /usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, chromosome>; _KeyOfValue = std::_Select1st, chromosome> >; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’: 2022-02-17T17:43:16,207 /usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:16,207 2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-02-17T17:43:16,208 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:16,368 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, chromosome>; _KeyOfValue = std::_Select1st, chromosome> >; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’: 2022-02-17T17:43:16,369 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:16,369 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-02-17T17:43:16,369 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:16,370 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:16,627 In file included from /usr/include/c++/10/map:61, 2022-02-17T17:43:16,627 from src/straw.cpp:28: 2022-02-17T17:43:16,628 /usr/include/c++/10/bits/stl_map.h: In function ‘void parsePositions(const string&, std::string&, int64_t&, int64_t&, std::map, chromosome>)’: 2022-02-17T17:43:16,628 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:16,629 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:16,629 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:16,629 502 | std::tuple(__k), 2022-02-17T17:43:16,629 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:16,630 503 | std::tuple<>()); 2022-02-17T17:43:16,630 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:17,056 /usr/include/c++/10/bits/stl_map.h: In function ‘std::map, chromosome> readHeader(std::istream&, int64_t&, std::string&, int32_t&, int32_t&, int64_t&, int64_t&)’: 2022-02-17T17:43:17,057 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:17,057 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:17,057 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:17,058 502 | std::tuple(__k), 2022-02-17T17:43:17,058 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:17,058 503 | std::tuple<>()); 2022-02-17T17:43:17,059 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:18,011 In file included from /usr/include/c++/10/map:60, 2022-02-17T17:43:18,012 from src/straw.cpp:28: 2022-02-17T17:43:18,012 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2022-02-17T17:43:18,013 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:18,013 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-02-17T17:43:18,013 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:18,218 In file included from /usr/include/c++/10/map:61, 2022-02-17T17:43:18,219 from src/straw.cpp:28: 2022-02-17T17:43:18,219 /usr/include/c++/10/bits/stl_map.h: In member function ‘std::vector MatrixZoomData::getRecords(int64_t, int64_t, int64_t, int64_t)’: 2022-02-17T17:43:18,219 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:18,220 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:18,220 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:18,220 502 | std::tuple(__k), 2022-02-17T17:43:18,221 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:18,221 503 | std::tuple<>()); 2022-02-17T17:43:18,221 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:19,178 /usr/include/c++/10/bits/stl_map.h: In function ‘void populateBlockMap(std::istream&, int32_t, std::map&)’: 2022-02-17T17:43:19,178 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:19,179 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:19,179 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:19,179 502 | std::tuple(__k), 2022-02-17T17:43:19,180 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:19,180 503 | std::tuple<>()); 2022-02-17T17:43:19,180 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:20,754 /usr/include/c++/10/bits/stl_map.h: In member function ‘MatrixZoomData* HiCFile::getMatrixZoomData(const string&, const string&, const string&, const string&, const string&, int32_t)’: 2022-02-17T17:43:20,754 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:20,755 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:20,755 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:20,755 502 | std::tuple(__k), 2022-02-17T17:43:20,756 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:20,756 503 | std::tuple<>()); 2022-02-17T17:43:20,756 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:20,757 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:20,757 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:20,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:20,757 502 | std::tuple(__k), 2022-02-17T17:43:20,758 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:20,758 503 | std::tuple<>()); 2022-02-17T17:43:20,758 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:21,088 /usr/include/c++/10/bits/stl_map.h: In function ‘std::vector straw(const string&, const string&, const string&, const string&, const string&, const string&, int32_t)’: 2022-02-17T17:43:21,089 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:21,089 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:21,090 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:21,090 502 | std::tuple(__k), 2022-02-17T17:43:21,090 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:21,091 503 | std::tuple<>()); 2022-02-17T17:43:21,091 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:21,093 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2022-02-17T17:43:21,094 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-02-17T17:43:21,094 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:21,094 502 | std::tuple(__k), 2022-02-17T17:43:21,095 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-02-17T17:43:21,095 503 | std::tuple<>()); 2022-02-17T17:43:21,095 | ~~~~~~~~~~~~~~~ 2022-02-17T17:43:58,799 creating build/lib.linux-armv7l-3.9 2022-02-17T17:43:58,801 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/src/straw.o -L/usr/lib -o build/lib.linux-armv7l-3.9/hicstraw.cpython-39-arm-linux-gnueabihf.so -lcurl -lz 2022-02-17T17:44:00,237 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-02-17T17:44:00,238 warnings.warn( 2022-02-17T17:44:00,245 running install 2022-02-17T17:44:00,308 running install_lib 2022-02-17T17:44:00,318 creating build/bdist.linux-armv7l 2022-02-17T17:44:00,319 creating build/bdist.linux-armv7l/wheel 2022-02-17T17:44:00,569 running install_egg_info 2022-02-17T17:44:00,621 running egg_info 2022-02-17T17:44:00,655 writing manifest file 'hic_straw.egg-info/SOURCES.txt' 2022-02-17T17:44:00,657 Copying hic_straw.egg-info to build/bdist.linux-armv7l/wheel/hic_straw-1.1.2-py3.9.egg-info 2022-02-17T17:44:00,681 running install_scripts 2022-02-17T17:44:02,944 Building wheel for hic-straw (setup.py): finished with status 'done' 2022-02-17T17:44:02,995 Created wheel for hic-straw: filename=hic_straw-1.1.2-cp39-cp39-linux_armv7l.whl size=1451032 sha256=c1109f7621a956427f75d946b0da621914cfa0c6ee22971ad588601d8b5c7f27 2022-02-17T17:44:02,997 Stored in directory: /tmp/pip-ephem-wheel-cache-c10o9sbl/wheels/e5/23/a3/e162c577d344b04ac77ce6595998aa96b49e1f58d40490cec1 2022-02-17T17:44:03,020 Successfully built hic-straw 2022-02-17T17:44:03,133 Removed build tracker: '/tmp/pip-req-tracker-dq4181br'