2022-03-01T11:02:54,876 Created temporary directory: /tmp/pip-ephem-wheel-cache-ucrbm0bm 2022-03-01T11:02:54,882 Created temporary directory: /tmp/pip-req-tracker-as2zaf3v 2022-03-01T11:02:54,883 Initialized build tracking at /tmp/pip-req-tracker-as2zaf3v 2022-03-01T11:02:54,883 Created build tracker: /tmp/pip-req-tracker-as2zaf3v 2022-03-01T11:02:54,883 Entered build tracker: /tmp/pip-req-tracker-as2zaf3v 2022-03-01T11:02:54,884 Created temporary directory: /tmp/pip-wheel-ur7w5tzf 2022-03-01T11:02:54,953 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-01T11:02:54,961 2 location(s) to search for versions of ukat: 2022-03-01T11:02:54,961 * https://pypi.org/simple/ukat/ 2022-03-01T11:02:54,961 * https://www.piwheels.org/simple/ukat/ 2022-03-01T11:02:54,962 Fetching project page and analyzing links: https://pypi.org/simple/ukat/ 2022-03-01T11:02:54,964 Getting page https://pypi.org/simple/ukat/ 2022-03-01T11:02:54,967 Found index url https://pypi.org/simple 2022-03-01T11:02:55,086 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,088 Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz#sha256=25a9c52f7cfffe0200540cb1d58dedf44179895a1497eb5734f2d9b6eb1bcb10 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2 2022-03-01T11:02:55,089 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,091 Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz#sha256=8ef8bd041fd890a7ee675fef6147b5ffcc28035c5610521700d7388588b4af5c (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1 2022-03-01T11:02:55,091 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,093 Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz#sha256=a8b5320f2573ed8bab957ce0586e31d93bcb35b37ba1c67a015daacfff9dbe72 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2 2022-03-01T11:02:55,094 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,095 Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz#sha256=6196c64a7222252aaa28439335953207e99a1fa626faa3798bac45d538ab28ea (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0 2022-03-01T11:02:55,096 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl#sha256=b3fc505ef43643236b13eca125d09ec7accfde740c67784b6d01e40612c0b001 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,098 Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz#sha256=c67be1f753fa1ae71c9a0906f9f8155a2f8ce134f5443ad0cbca5786c0ea9587 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0 2022-03-01T11:02:55,099 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl#sha256=180dbbd1ce63be5e98d0f05e44410efd3ea1dfb0a1961ab6ea35c6dbee31a7c8 (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-03-01T11:02:55,100 Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz#sha256=f0636443684c047882b6770105e20b8a872b25206ca6d268a0ae5508c1c9d6cb (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0 2022-03-01T11:02:55,101 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl#sha256=b9f59a9574c92592553614dd2ce0ac3b394fa62325c2da815f799ca42de488cc (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-03-01T11:02:55,103 Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz#sha256=84694c2608c74bc3771b8586cc1ee18bf8d807a29f4ef95d570aff06f2202e0d (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0 2022-03-01T11:02:55,104 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/ 2022-03-01T11:02:55,104 Getting page https://www.piwheels.org/simple/ukat/ 2022-03-01T11:02:55,106 Found index url https://www.piwheels.org/simple 2022-03-01T11:02:55,318 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,319 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,319 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,320 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,320 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-03-01T11:02:55,321 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-03-01T11:02:55,321 Skipping link: not a file: https://www.piwheels.org/simple/ukat/ 2022-03-01T11:02:55,322 Skipping link: not a file: https://pypi.org/simple/ukat/ 2022-03-01T11:02:55,357 Given no hashes to check 1 links for project 'ukat': discarding no candidates 2022-03-01T11:02:55,389 Collecting ukat==0.6.0 2022-03-01T11:02:55,394 Created temporary directory: /tmp/pip-unpack-99eqdcls 2022-03-01T11:02:55,621 Downloading ukat-0.6.0.tar.gz (70 kB) 2022-03-01T11:02:55,946 Added ukat==0.6.0 from https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz#sha256=84694c2608c74bc3771b8586cc1ee18bf8d807a29f4ef95d570aff06f2202e0d to build tracker '/tmp/pip-req-tracker-as2zaf3v' 2022-03-01T11:02:55,948 Running setup.py (path:/tmp/pip-wheel-ur7w5tzf/ukat_64973a2099414595bdd191c2c713c035/setup.py) egg_info for package ukat 2022-03-01T11:02:55,949 Created temporary directory: /tmp/pip-pip-egg-info-8f3xlr2u 2022-03-01T11:02:55,950 Preparing metadata (setup.py): started 2022-03-01T11:02:55,952 Running command python setup.py egg_info 2022-03-01T11:02:58,067 running egg_info 2022-03-01T11:02:58,072 creating /tmp/pip-pip-egg-info-8f3xlr2u/ukat.egg-info 2022-03-01T11:02:58,087 writing manifest file '/tmp/pip-pip-egg-info-8f3xlr2u/ukat.egg-info/SOURCES.txt' 2022-03-01T11:02:58,151 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-03-01T11:02:58,152 no previously-included directories found matching 'doc' 2022-03-01T11:02:58,153 no previously-included directories found matching 'experiments' 2022-03-01T11:02:58,161 writing manifest file '/tmp/pip-pip-egg-info-8f3xlr2u/ukat.egg-info/SOURCES.txt' 2022-03-01T11:02:58,287 Preparing metadata (setup.py): finished with status 'done' 2022-03-01T11:02:58,299 Source in /tmp/pip-wheel-ur7w5tzf/ukat_64973a2099414595bdd191c2c713c035 has version 0.6.0, which satisfies requirement ukat==0.6.0 from https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz#sha256=84694c2608c74bc3771b8586cc1ee18bf8d807a29f4ef95d570aff06f2202e0d 2022-03-01T11:02:58,301 Removed ukat==0.6.0 from https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz#sha256=84694c2608c74bc3771b8586cc1ee18bf8d807a29f4ef95d570aff06f2202e0d from build tracker '/tmp/pip-req-tracker-as2zaf3v' 2022-03-01T11:02:58,315 Created temporary directory: /tmp/pip-unpack-i9h7q5gc 2022-03-01T11:02:58,316 Building wheels for collected packages: ukat 2022-03-01T11:02:58,326 Created temporary directory: /tmp/pip-wheel-b328zims 2022-03-01T11:02:58,326 Building wheel for ukat (setup.py): started 2022-03-01T11:02:58,328 Destination directory: /tmp/pip-wheel-b328zims 2022-03-01T11:02:58,329 Running command python setup.py bdist_wheel 2022-03-01T11:03:00,391 running bdist_wheel 2022-03-01T11:03:00,400 running build 2022-03-01T11:03:00,400 running build_py 2022-03-01T11:03:00,408 creating build 2022-03-01T11:03:00,409 creating build/lib 2022-03-01T11:03:00,410 creating build/lib/ukat 2022-03-01T11:03:00,412 copying ukat/__init__.py -> build/lib/ukat 2022-03-01T11:03:00,417 creating build/lib/ukat/qa 2022-03-01T11:03:00,418 copying ukat/qa/__init__.py -> build/lib/ukat/qa 2022-03-01T11:03:00,422 copying ukat/qa/snr.py -> build/lib/ukat/qa 2022-03-01T11:03:00,428 creating build/lib/ukat/mapping 2022-03-01T11:03:00,429 copying ukat/mapping/__init__.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,433 copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,438 copying ukat/mapping/t2.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,443 copying ukat/mapping/mtr.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,447 copying ukat/mapping/t1.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,452 copying ukat/mapping/t2star.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,457 copying ukat/mapping/b0.py -> build/lib/ukat/mapping 2022-03-01T11:03:00,461 creating build/lib/ukat/segmentation 2022-03-01T11:03:00,463 copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation 2022-03-01T11:03:00,466 copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation 2022-03-01T11:03:00,471 creating build/lib/ukat/utils 2022-03-01T11:03:00,473 copying ukat/utils/__init__.py -> build/lib/ukat/utils 2022-03-01T11:03:00,476 copying ukat/utils/tools.py -> build/lib/ukat/utils 2022-03-01T11:03:00,479 copying ukat/utils/arraystats.py -> build/lib/ukat/utils 2022-03-01T11:03:00,483 copying ukat/utils/siemens.py -> build/lib/ukat/utils 2022-03-01T11:03:00,488 creating build/lib/ukat/vessels 2022-03-01T11:03:00,489 copying ukat/vessels/__init__.py -> build/lib/ukat/vessels 2022-03-01T11:03:00,493 copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels 2022-03-01T11:03:00,498 creating build/lib/ukat/data 2022-03-01T11:03:00,499 copying ukat/data/__init__.py -> build/lib/ukat/data 2022-03-01T11:03:00,503 copying ukat/data/fetch.py -> build/lib/ukat/data 2022-03-01T11:03:00,509 creating build/lib/ukat/qa/tests 2022-03-01T11:03:00,511 copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests 2022-03-01T11:03:00,514 copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests 2022-03-01T11:03:00,520 creating build/lib/ukat/mapping/tests 2022-03-01T11:03:00,522 copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,526 copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,529 copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,534 copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,538 copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,543 copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,548 copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests 2022-03-01T11:03:00,554 creating build/lib/ukat/segmentation/tests 2022-03-01T11:03:00,555 copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests 2022-03-01T11:03:00,559 copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests 2022-03-01T11:03:00,564 creating build/lib/ukat/utils/tests 2022-03-01T11:03:00,565 copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests 2022-03-01T11:03:00,569 copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests 2022-03-01T11:03:00,573 copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests 2022-03-01T11:03:00,576 copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests 2022-03-01T11:03:00,582 creating build/lib/ukat/vessels/tests 2022-03-01T11:03:00,584 copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests 2022-03-01T11:03:00,587 copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests 2022-03-01T11:03:00,593 creating build/lib/ukat/data/tests 2022-03-01T11:03:00,594 copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests 2022-03-01T11:03:00,597 copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests 2022-03-01T11:03:00,601 running egg_info 2022-03-01T11:03:00,716 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-03-01T11:03:00,717 no previously-included directories found matching 'doc' 2022-03-01T11:03:00,718 no previously-included directories found matching 'experiments' 2022-03-01T11:03:00,727 writing manifest file 'ukat.egg-info/SOURCES.txt' 2022-03-01T11:03:00,733 creating build/lib/ukat/utils/tests/test_data 2022-03-01T11:03:00,735 copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data 2022-03-01T11:03:00,739 copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data 2022-03-01T11:03:00,743 copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data 2022-03-01T11:03:00,769 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-03-01T11:03:00,770 setuptools.SetuptoolsDeprecationWarning, 2022-03-01T11:03:00,774 running install 2022-03-01T11:03:00,837 running install_lib 2022-03-01T11:03:00,844 creating build/bdist.linux-armv7l 2022-03-01T11:03:00,844 creating build/bdist.linux-armv7l/wheel 2022-03-01T11:03:00,847 creating build/bdist.linux-armv7l/wheel/ukat 2022-03-01T11:03:00,852 creating build/bdist.linux-armv7l/wheel/ukat/qa 2022-03-01T11:03:00,862 creating build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-03-01T11:03:00,871 creating build/bdist.linux-armv7l/wheel/ukat/mapping 2022-03-01T11:03:00,885 creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-03-01T11:03:00,932 creating build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-03-01T11:03:00,937 creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-03-01T11:03:00,950 creating build/bdist.linux-armv7l/wheel/ukat/utils 2022-03-01T11:03:00,963 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-03-01T11:03:00,981 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-03-01T11:03:00,996 creating build/bdist.linux-armv7l/wheel/ukat/vessels 2022-03-01T11:03:01,001 creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-03-01T11:03:01,015 creating build/bdist.linux-armv7l/wheel/ukat/data 2022-03-01T11:03:01,020 creating build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-03-01T11:03:01,033 running install_egg_info 2022-03-01T11:03:01,049 Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.6.0-py3.7.egg-info 2022-03-01T11:03:01,069 running install_scripts 2022-03-01T11:03:01,634 Building wheel for ukat (setup.py): finished with status 'done' 2022-03-01T11:03:01,644 Created wheel for ukat: filename=ukat-0.6.0-py3-none-any.whl size=87716 sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 2022-03-01T11:03:01,646 Stored in directory: /tmp/pip-ephem-wheel-cache-ucrbm0bm/wheels/36/7e/61/47dfcd24ee722f012d9ae0bedf620aa80f5677f471bac0efd9 2022-03-01T11:03:01,674 Successfully built ukat 2022-03-01T11:03:01,687 Removed build tracker: '/tmp/pip-req-tracker-as2zaf3v'