2022-03-07T18:13:20,939 Created temporary directory: /tmp/pip-ephem-wheel-cache-l5f5vf6q 2022-03-07T18:13:20,946 Created temporary directory: /tmp/pip-req-tracker-2ewors01 2022-03-07T18:13:20,947 Initialized build tracking at /tmp/pip-req-tracker-2ewors01 2022-03-07T18:13:20,947 Created build tracker: /tmp/pip-req-tracker-2ewors01 2022-03-07T18:13:20,948 Entered build tracker: /tmp/pip-req-tracker-2ewors01 2022-03-07T18:13:20,949 Created temporary directory: /tmp/pip-wheel-_rbm5tp3 2022-03-07T18:13:21,011 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-07T18:13:21,015 2 location(s) to search for versions of topaz-em: 2022-03-07T18:13:21,015 * https://pypi.org/simple/topaz-em/ 2022-03-07T18:13:21,015 * https://www.piwheels.org/simple/topaz-em/ 2022-03-07T18:13:21,015 Fetching project page and analyzing links: https://pypi.org/simple/topaz-em/ 2022-03-07T18:13:21,018 Getting page https://pypi.org/simple/topaz-em/ 2022-03-07T18:13:21,022 Found index url https://pypi.org/simple 2022-03-07T18:13:21,397 Found link https://files.pythonhosted.org/packages/9a/cb/4f17f2c95da5e817fad0519039e7c11602b71852a4641109d9e482b6f559/topaz-em-0.2.0.tar.gz#sha256=4b9b43563633e8fd1ea0ce530eb8fef621709ec7e8b3354ed948b3f7020c7258 (from https://pypi.org/simple/topaz-em/), version: 0.2.0 2022-03-07T18:13:21,398 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/f0/5f/2bd1bdc443054bf8d70a1502c93eb7ed4dd08cf155fb5bab28d1a19a4c8e/topaz_em-0.2.0-py2.py3-none-any.whl#sha256=1d1baffd7a4784078276df7728dc046ffaac7af882967260db369d674bc262f3 (from https://pypi.org/simple/topaz-em/) 2022-03-07T18:13:21,399 Found link https://files.pythonhosted.org/packages/25/f2/4917563aef1156875d8d72a5bf581c03feb1dcafc9a946f9816d93d376b2/topaz-em-0.2.1.tar.gz#sha256=39ec63e582453cc748ccb67b5ce4b9da12f86a06e934a6e1eea3a4d7b4b0a482 (from https://pypi.org/simple/topaz-em/), version: 0.2.1 2022-03-07T18:13:21,400 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/c8/df/23eca0fa031a43346820d711deb20210609c29eeacac2c3b4bb872e0b9c3/topaz_em-0.2.1-py2.py3-none-any.whl#sha256=b2f6e70ec7312a3436aef3c8b489653949ebc068c5cbb4040faafbec7c6babaa (from https://pypi.org/simple/topaz-em/) 2022-03-07T18:13:21,400 Found link https://files.pythonhosted.org/packages/c2/dc/9901ee176435acfac048a42053559294bb948b37e9be79b7435d5ed7a4c8/topaz-em-0.2.2.tar.gz#sha256=c2211fde645cb781d1e47f44d5bd396da749f1f81cc4a66d96148326f3b5a4bc (from https://pypi.org/simple/topaz-em/), version: 0.2.2 2022-03-07T18:13:21,401 Found link https://files.pythonhosted.org/packages/69/a9/4c0bf446ea2e9f86b09ed921811fca0bf9ab4ccc0b4bcf35c3ae221a8bc4/topaz-em-0.2.3.tar.gz#sha256=e57416fc40081fcd1886b2c94d13644083a6b6255d1ad7cc1695f394889cf9da (from https://pypi.org/simple/topaz-em/), version: 0.2.3 2022-03-07T18:13:21,402 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/59/a8/e5ec76bfedffccaf69d72bf7a2be4ea5dbd9c44df3a64d969a9d80551a78/topaz_em-0.2.3-py3-none-any.whl#sha256=5c4ee55a8cc36e266f4ec651f877a0838e708aa9cf6cc47b9dcbde3db09721bb (from https://pypi.org/simple/topaz-em/) 2022-03-07T18:13:21,403 Found link https://files.pythonhosted.org/packages/b3/5c/b09a5447f6ea2db96a199586e2f5f1824e9384bf4d20882b461a426ff1af/topaz-em-0.2.4.tar.gz#sha256=e59200127fda2c23f5357c86e2c5f3e4ddfd5c103cf0b7138e700cac5b1fc516 (from https://pypi.org/simple/topaz-em/), version: 0.2.4 2022-03-07T18:13:21,403 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/b2/cc/46c4c0f84cacdf2b167a3909790189a28f6ff4eb462a552d454de549af9e/topaz_em-0.2.4-py3-none-any.whl#sha256=25561ebcb450d9aa42ef63bf569d1b60dab233206b186bb02b246d8284b23b5b (from https://pypi.org/simple/topaz-em/) 2022-03-07T18:13:21,404 Found link https://files.pythonhosted.org/packages/06/ea/44888d346ced25f465365e98d44f8f38e0889ffb7c4447ee5e87ff8014ec/topaz-em-0.2.5a0.tar.gz#sha256=64a94e2293058fcc38d0e60b3d731aef70c63c4b8db30ac1dfb1ebeb174d27a2 (from https://pypi.org/simple/topaz-em/), version: 0.2.5a0 2022-03-07T18:13:21,405 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/52/81/56d904118d1a299c1b8042feffb4827029985224829b0fc2150f4c6ae1f1/topaz_em-0.2.5a0-py3-none-any.whl#sha256=bc4c9edf8926f6a1beca655003286a7c9cc109dec928eb15c59b653811008278 (from https://pypi.org/simple/topaz-em/) 2022-03-07T18:13:21,406 Fetching project page and analyzing links: https://www.piwheels.org/simple/topaz-em/ 2022-03-07T18:13:21,406 Getting page https://www.piwheels.org/simple/topaz-em/ 2022-03-07T18:13:21,409 Found index url https://www.piwheels.org/simple 2022-03-07T18:13:21,641 Skipping link: No binaries permitted for topaz-em: https://www.piwheels.org/simple/topaz-em/topaz_em-0.2.0-py2.py3-none-any.whl#sha256=1d1baffd7a4784078276df7728dc046ffaac7af882967260db369d674bc262f3 (from https://www.piwheels.org/simple/topaz-em/) 2022-03-07T18:13:21,642 Skipping link: No binaries permitted for topaz-em: https://www.piwheels.org/simple/topaz-em/topaz_em-0.2.1-py2.py3-none-any.whl#sha256=b2f6e70ec7312a3436aef3c8b489653949ebc068c5cbb4040faafbec7c6babaa (from https://www.piwheels.org/simple/topaz-em/) 2022-03-07T18:13:21,642 Skipping link: No binaries permitted for topaz-em: https://www.piwheels.org/simple/topaz-em/topaz_em-0.2.2-py3-none-any.whl#sha256=0a51911e290fe605f2fe66b679611e6c2c1029e9edb6a5d8d773f2d0b96c8a4d (from https://www.piwheels.org/simple/topaz-em/) 2022-03-07T18:13:21,643 Skipping link: No binaries permitted for topaz-em: https://www.piwheels.org/simple/topaz-em/topaz_em-0.2.3-py3-none-any.whl#sha256=5c4ee55a8cc36e266f4ec651f877a0838e708aa9cf6cc47b9dcbde3db09721bb (from https://www.piwheels.org/simple/topaz-em/) 2022-03-07T18:13:21,643 Skipping link: No binaries permitted for topaz-em: https://www.piwheels.org/simple/topaz-em/topaz_em-0.2.4-py3-none-any.whl#sha256=25561ebcb450d9aa42ef63bf569d1b60dab233206b186bb02b246d8284b23b5b (from https://www.piwheels.org/simple/topaz-em/) 2022-03-07T18:13:21,675 Given no hashes to check 1 links for project 'topaz-em': discarding no candidates 2022-03-07T18:13:21,707 Collecting topaz-em==0.2.5a0 2022-03-07T18:13:21,711 Created temporary directory: /tmp/pip-unpack-k2ta93vk 2022-03-07T18:13:24,136 Downloading topaz-em-0.2.5a0.tar.gz (48.2 MB) 2022-03-07T18:13:42,986 Added topaz-em==0.2.5a0 from https://files.pythonhosted.org/packages/06/ea/44888d346ced25f465365e98d44f8f38e0889ffb7c4447ee5e87ff8014ec/topaz-em-0.2.5a0.tar.gz#sha256=64a94e2293058fcc38d0e60b3d731aef70c63c4b8db30ac1dfb1ebeb174d27a2 to build tracker '/tmp/pip-req-tracker-2ewors01' 2022-03-07T18:13:42,990 Running setup.py (path:/tmp/pip-wheel-_rbm5tp3/topaz-em_0aaf2b90ad744f21a4807615d105fb6b/setup.py) egg_info for package topaz-em 2022-03-07T18:13:42,993 Created temporary directory: /tmp/pip-pip-egg-info-h54ihv8d 2022-03-07T18:13:42,994 Running command python setup.py egg_info 2022-03-07T18:13:45,120 running egg_info 2022-03-07T18:13:45,128 creating /tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info 2022-03-07T18:13:45,130 writing entry points to /tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/entry_points.txt 2022-03-07T18:13:45,134 writing top-level names to /tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/top_level.txt 2022-03-07T18:13:45,136 writing dependency_links to /tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/dependency_links.txt 2022-03-07T18:13:45,139 writing /tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/PKG-INFO 2022-03-07T18:13:45,143 writing requirements to /tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/requires.txt 2022-03-07T18:13:45,146 writing manifest file '/tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/SOURCES.txt' 2022-03-07T18:13:45,511 reading manifest file '/tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/SOURCES.txt' 2022-03-07T18:13:45,515 reading manifest template 'MANIFEST.in' 2022-03-07T18:13:45,532 writing manifest file '/tmp/pip-pip-egg-info-h54ihv8d/topaz_em.egg-info/SOURCES.txt' 2022-03-07T18:13:45,534 /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '0.2.5a' to '0.2.5a0' 2022-03-07T18:13:45,535 warnings.warn(tmpl.format(**locals())) 2022-03-07T18:13:45,666 Source in /tmp/pip-wheel-_rbm5tp3/topaz-em_0aaf2b90ad744f21a4807615d105fb6b has version 0.2.5a0, which satisfies requirement topaz-em==0.2.5a0 from https://files.pythonhosted.org/packages/06/ea/44888d346ced25f465365e98d44f8f38e0889ffb7c4447ee5e87ff8014ec/topaz-em-0.2.5a0.tar.gz#sha256=64a94e2293058fcc38d0e60b3d731aef70c63c4b8db30ac1dfb1ebeb174d27a2 2022-03-07T18:13:45,667 Removed topaz-em==0.2.5a0 from https://files.pythonhosted.org/packages/06/ea/44888d346ced25f465365e98d44f8f38e0889ffb7c4447ee5e87ff8014ec/topaz-em-0.2.5a0.tar.gz#sha256=64a94e2293058fcc38d0e60b3d731aef70c63c4b8db30ac1dfb1ebeb174d27a2 from build tracker '/tmp/pip-req-tracker-2ewors01' 2022-03-07T18:13:45,678 Created temporary directory: /tmp/pip-unpack-9es6bibd 2022-03-07T18:13:45,680 Building wheels for collected packages: topaz-em 2022-03-07T18:13:45,692 Created temporary directory: /tmp/pip-wheel-z1ljj697 2022-03-07T18:13:45,693 Building wheel for topaz-em (setup.py): started 2022-03-07T18:13:45,695 Destination directory: /tmp/pip-wheel-z1ljj697 2022-03-07T18:13:45,696 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_rbm5tp3/topaz-em_0aaf2b90ad744f21a4807615d105fb6b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_rbm5tp3/topaz-em_0aaf2b90ad744f21a4807615d105fb6b/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-z1ljj697 2022-03-07T18:13:47,745 /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing '0.2.5a' to '0.2.5a0' 2022-03-07T18:13:47,746 warnings.warn(tmpl.format(**locals())) 2022-03-07T18:13:47,876 running bdist_wheel 2022-03-07T18:13:47,891 running build 2022-03-07T18:13:47,892 running build_py 2022-03-07T18:13:48,232 creating build 2022-03-07T18:13:48,233 creating build/lib 2022-03-07T18:13:48,234 creating build/lib/topaz 2022-03-07T18:13:48,236 copying topaz/predict.py -> build/lib/topaz 2022-03-07T18:13:48,241 copying topaz/algorithms.py -> build/lib/topaz 2022-03-07T18:13:48,244 copying topaz/_version.py -> build/lib/topaz 2022-03-07T18:13:48,248 copying topaz/main.py -> build/lib/topaz 2022-03-07T18:13:48,253 copying topaz/__init__.py -> build/lib/topaz 2022-03-07T18:13:48,256 copying topaz/metrics.py -> build/lib/topaz 2022-03-07T18:13:48,260 copying topaz/mrc.py -> build/lib/topaz 2022-03-07T18:13:48,265 copying topaz/torch.py -> build/lib/topaz 2022-03-07T18:13:48,269 copying topaz/methods.py -> build/lib/topaz 2022-03-07T18:13:48,274 copying topaz/denoise.py -> build/lib/topaz 2022-03-07T18:13:48,283 copying topaz/stats.py -> build/lib/topaz 2022-03-07T18:13:48,287 copying topaz/cuda.py -> build/lib/topaz 2022-03-07T18:13:48,293 creating build/lib/topaz/utils 2022-03-07T18:13:48,295 copying topaz/utils/printing.py -> build/lib/topaz/utils 2022-03-07T18:13:48,299 copying topaz/utils/star.py -> build/lib/topaz/utils 2022-03-07T18:13:48,303 copying topaz/utils/__init__.py -> build/lib/topaz/utils 2022-03-07T18:13:48,307 copying topaz/utils/files.py -> build/lib/topaz/utils 2022-03-07T18:13:48,312 copying topaz/utils/picks.py -> build/lib/topaz/utils 2022-03-07T18:13:48,316 copying topaz/utils/conversions.py -> build/lib/topaz/utils 2022-03-07T18:13:48,320 copying topaz/utils/image.py -> build/lib/topaz/utils 2022-03-07T18:13:48,325 creating build/lib/topaz/transform 2022-03-07T18:13:48,327 copying topaz/transform/__init__.py -> build/lib/topaz/transform 2022-03-07T18:13:48,332 copying topaz/transform/scaled_gaussian_mixture.py -> build/lib/topaz/transform 2022-03-07T18:13:48,339 creating build/lib/topaz/commands 2022-03-07T18:13:48,341 copying topaz/commands/split.py -> build/lib/topaz/commands 2022-03-07T18:13:48,345 copying topaz/commands/scale_coordinates.py -> build/lib/topaz/commands 2022-03-07T18:13:48,349 copying topaz/commands/star_particles_threshold.py -> build/lib/topaz/commands 2022-03-07T18:13:48,353 copying topaz/commands/coordinates_to_boxes.py -> build/lib/topaz/commands 2022-03-07T18:13:48,357 copying topaz/commands/train.py -> build/lib/topaz/commands 2022-03-07T18:13:48,364 copying topaz/commands/downsample.py -> build/lib/topaz/commands 2022-03-07T18:13:48,368 copying topaz/commands/train_test_split.py -> build/lib/topaz/commands 2022-03-07T18:13:48,372 copying topaz/commands/extract.py -> build/lib/topaz/commands 2022-03-07T18:13:48,378 copying topaz/commands/boxes_to_coordinates.py -> build/lib/topaz/commands 2022-03-07T18:13:48,382 copying topaz/commands/gui.py -> build/lib/topaz/commands 2022-03-07T18:13:48,385 copying topaz/commands/segment.py -> build/lib/topaz/commands 2022-03-07T18:13:48,389 copying topaz/commands/star_to_coordinates.py -> build/lib/topaz/commands 2022-03-07T18:13:48,393 copying topaz/commands/particle_stack.py -> build/lib/topaz/commands 2022-03-07T18:13:48,398 copying topaz/commands/coordinates_to_eman2_json.py -> build/lib/topaz/commands 2022-03-07T18:13:48,402 copying topaz/commands/coordinates_to_star.py -> build/lib/topaz/commands 2022-03-07T18:13:48,406 copying topaz/commands/denoise3d.py -> build/lib/topaz/commands 2022-03-07T18:13:48,413 copying topaz/commands/precision_recall_curve.py -> build/lib/topaz/commands 2022-03-07T18:13:48,417 copying topaz/commands/normalize.py -> build/lib/topaz/commands 2022-03-07T18:13:48,421 copying topaz/commands/__init__.py -> build/lib/topaz/commands 2022-03-07T18:13:48,424 copying topaz/commands/preprocess.py -> build/lib/topaz/commands 2022-03-07T18:13:48,428 copying topaz/commands/denoise.py -> build/lib/topaz/commands 2022-03-07T18:13:48,434 copying topaz/commands/convert.py -> build/lib/topaz/commands 2022-03-07T18:13:48,443 creating build/lib/topaz/model 2022-03-07T18:13:48,446 copying topaz/model/classifier.py -> build/lib/topaz/model 2022-03-07T18:13:48,451 copying topaz/model/__init__.py -> build/lib/topaz/model 2022-03-07T18:13:48,455 copying topaz/model/generative.py -> build/lib/topaz/model 2022-03-07T18:13:48,459 copying topaz/model/utils.py -> build/lib/topaz/model 2022-03-07T18:13:48,463 copying topaz/model/factory.py -> build/lib/topaz/model 2022-03-07T18:13:48,469 creating build/lib/topaz/utils/data 2022-03-07T18:13:48,471 copying topaz/utils/data/coordinates.py -> build/lib/topaz/utils/data 2022-03-07T18:13:48,475 copying topaz/utils/data/__init__.py -> build/lib/topaz/utils/data 2022-03-07T18:13:48,481 copying topaz/utils/data/sampler.py -> build/lib/topaz/utils/data 2022-03-07T18:13:48,488 copying topaz/utils/data/loader.py -> build/lib/topaz/utils/data 2022-03-07T18:13:48,494 copying topaz/utils/data/partition.py -> build/lib/topaz/utils/data 2022-03-07T18:13:48,500 creating build/lib/topaz/model/features 2022-03-07T18:13:48,502 copying topaz/model/features/msnet.py -> build/lib/topaz/model/features 2022-03-07T18:13:48,508 copying topaz/model/features/densenet.py -> build/lib/topaz/model/features 2022-03-07T18:13:48,512 copying topaz/model/features/resnet.py -> build/lib/topaz/model/features 2022-03-07T18:13:48,519 copying topaz/model/features/__init__.py -> build/lib/topaz/model/features 2022-03-07T18:13:48,523 copying topaz/model/features/basic.py -> build/lib/topaz/model/features 2022-03-07T18:13:48,528 running egg_info 2022-03-07T18:13:48,562 writing entry points to topaz_em.egg-info/entry_points.txt 2022-03-07T18:13:48,565 writing requirements to topaz_em.egg-info/requires.txt 2022-03-07T18:13:48,567 writing dependency_links to topaz_em.egg-info/dependency_links.txt 2022-03-07T18:13:48,569 writing topaz_em.egg-info/PKG-INFO 2022-03-07T18:13:48,573 writing top-level names to topaz_em.egg-info/top_level.txt 2022-03-07T18:13:48,595 reading manifest file 'topaz_em.egg-info/SOURCES.txt' 2022-03-07T18:13:48,603 reading manifest template 'MANIFEST.in' 2022-03-07T18:13:48,622 writing manifest file 'topaz_em.egg-info/SOURCES.txt' 2022-03-07T18:13:48,632 creating build/lib/topaz/gui 2022-03-07T18:13:48,634 copying topaz/gui/topaz.html -> build/lib/topaz/gui 2022-03-07T18:13:48,691 creating build/lib/topaz/pretrained 2022-03-07T18:13:48,692 creating build/lib/topaz/pretrained/denoise 2022-03-07T18:13:48,695 copying topaz/pretrained/denoise/affine_L1_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:48,703 copying topaz/pretrained/denoise/fcnn_L1_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:48,897 copying topaz/pretrained/denoise/unet-3d-10a-v0.2.4.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:49,976 copying topaz/pretrained/denoise/unet-3d-20a-v0.2.4.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:51,050 copying topaz/pretrained/denoise/unet_L2_v0.2.1.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:51,409 copying topaz/pretrained/denoise/unet_L2_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:51,832 copying topaz/pretrained/denoise/unet_small_L1_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2022-03-07T18:13:52,083 creating build/lib/topaz/pretrained/detector 2022-03-07T18:13:52,085 copying topaz/pretrained/detector/resnet16_u32.sav -> build/lib/topaz/pretrained/detector 2022-03-07T18:13:52,259 copying topaz/pretrained/detector/resnet16_u64.sav -> build/lib/topaz/pretrained/detector 2022-03-07T18:13:53,026 copying topaz/pretrained/detector/resnet8_u32.sav -> build/lib/topaz/pretrained/detector 2022-03-07T18:13:53,160 copying topaz/pretrained/detector/resnet8_u64.sav -> build/lib/topaz/pretrained/detector 2022-03-07T18:13:53,680 installing to build/bdist.linux-armv7l/wheel 2022-03-07T18:13:53,681 running install 2022-03-07T18:13:53,683 running install_lib 2022-03-07T18:13:53,690 creating build/bdist.linux-armv7l 2022-03-07T18:13:53,690 creating build/bdist.linux-armv7l/wheel 2022-03-07T18:13:53,694 creating build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:53,697 creating build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,701 copying build/lib/topaz/utils/printing.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,705 copying build/lib/topaz/utils/star.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,711 copying build/lib/topaz/utils/__init__.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,715 copying build/lib/topaz/utils/files.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,722 copying build/lib/topaz/utils/picks.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,727 copying build/lib/topaz/utils/conversions.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,732 copying build/lib/topaz/utils/image.py -> build/bdist.linux-armv7l/wheel/topaz/utils 2022-03-07T18:13:53,739 creating build/bdist.linux-armv7l/wheel/topaz/utils/data 2022-03-07T18:13:53,742 copying build/lib/topaz/utils/data/coordinates.py -> build/bdist.linux-armv7l/wheel/topaz/utils/data 2022-03-07T18:13:53,748 copying build/lib/topaz/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/topaz/utils/data 2022-03-07T18:13:53,752 copying build/lib/topaz/utils/data/sampler.py -> build/bdist.linux-armv7l/wheel/topaz/utils/data 2022-03-07T18:13:53,756 copying build/lib/topaz/utils/data/loader.py -> build/bdist.linux-armv7l/wheel/topaz/utils/data 2022-03-07T18:13:53,761 copying build/lib/topaz/utils/data/partition.py -> build/bdist.linux-armv7l/wheel/topaz/utils/data 2022-03-07T18:13:53,766 creating build/bdist.linux-armv7l/wheel/topaz/transform 2022-03-07T18:13:53,768 copying build/lib/topaz/transform/__init__.py -> build/bdist.linux-armv7l/wheel/topaz/transform 2022-03-07T18:13:53,774 copying build/lib/topaz/transform/scaled_gaussian_mixture.py -> build/bdist.linux-armv7l/wheel/topaz/transform 2022-03-07T18:13:53,782 creating build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,785 copying build/lib/topaz/commands/split.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,790 copying build/lib/topaz/commands/scale_coordinates.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,794 copying build/lib/topaz/commands/star_particles_threshold.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,798 copying build/lib/topaz/commands/coordinates_to_boxes.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,802 copying build/lib/topaz/commands/train.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,809 copying build/lib/topaz/commands/downsample.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,815 copying build/lib/topaz/commands/train_test_split.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,821 copying build/lib/topaz/commands/extract.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,828 copying build/lib/topaz/commands/boxes_to_coordinates.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,832 copying build/lib/topaz/commands/gui.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,836 copying build/lib/topaz/commands/segment.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,840 copying build/lib/topaz/commands/star_to_coordinates.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,844 copying build/lib/topaz/commands/particle_stack.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,849 copying build/lib/topaz/commands/coordinates_to_eman2_json.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,854 copying build/lib/topaz/commands/coordinates_to_star.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,859 copying build/lib/topaz/commands/denoise3d.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,868 copying build/lib/topaz/commands/precision_recall_curve.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,873 copying build/lib/topaz/commands/normalize.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,877 copying build/lib/topaz/commands/__init__.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,880 copying build/lib/topaz/commands/preprocess.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,884 copying build/lib/topaz/commands/denoise.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,891 copying build/lib/topaz/commands/convert.py -> build/bdist.linux-armv7l/wheel/topaz/commands 2022-03-07T18:13:53,898 copying build/lib/topaz/predict.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:53,903 copying build/lib/topaz/algorithms.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:53,910 creating build/bdist.linux-armv7l/wheel/topaz/pretrained 2022-03-07T18:13:53,913 creating build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:53,915 copying build/lib/topaz/pretrained/denoise/unet_L2_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:54,323 copying build/lib/topaz/pretrained/denoise/affine_L1_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:54,328 copying build/lib/topaz/pretrained/denoise/unet_small_L1_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:54,572 copying build/lib/topaz/pretrained/denoise/unet-3d-20a-v0.2.4.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:55,685 copying build/lib/topaz/pretrained/denoise/fcnn_L1_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:55,879 copying build/lib/topaz/pretrained/denoise/unet_L2_v0.2.1.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:56,243 copying build/lib/topaz/pretrained/denoise/unet-3d-10a-v0.2.4.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2022-03-07T18:13:57,356 creating build/bdist.linux-armv7l/wheel/topaz/pretrained/detector 2022-03-07T18:13:57,358 copying build/lib/topaz/pretrained/detector/resnet8_u32.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/detector 2022-03-07T18:13:57,485 copying build/lib/topaz/pretrained/detector/resnet8_u64.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/detector 2022-03-07T18:13:57,989 copying build/lib/topaz/pretrained/detector/resnet16_u64.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/detector 2022-03-07T18:13:58,685 copying build/lib/topaz/pretrained/detector/resnet16_u32.sav -> build/bdist.linux-armv7l/wheel/topaz/pretrained/detector 2022-03-07T18:13:58,868 copying build/lib/topaz/_version.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,874 copying build/lib/topaz/main.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,880 copying build/lib/topaz/__init__.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,884 copying build/lib/topaz/metrics.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,888 copying build/lib/topaz/mrc.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,893 copying build/lib/topaz/torch.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,897 copying build/lib/topaz/methods.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,904 creating build/bdist.linux-armv7l/wheel/topaz/model 2022-03-07T18:13:58,905 copying build/lib/topaz/model/classifier.py -> build/bdist.linux-armv7l/wheel/topaz/model 2022-03-07T18:13:58,911 creating build/bdist.linux-armv7l/wheel/topaz/model/features 2022-03-07T18:13:58,913 copying build/lib/topaz/model/features/msnet.py -> build/bdist.linux-armv7l/wheel/topaz/model/features 2022-03-07T18:13:58,919 copying build/lib/topaz/model/features/densenet.py -> build/bdist.linux-armv7l/wheel/topaz/model/features 2022-03-07T18:13:58,924 copying build/lib/topaz/model/features/resnet.py -> build/bdist.linux-armv7l/wheel/topaz/model/features 2022-03-07T18:13:58,930 copying build/lib/topaz/model/features/__init__.py -> build/bdist.linux-armv7l/wheel/topaz/model/features 2022-03-07T18:13:58,934 copying build/lib/topaz/model/features/basic.py -> build/bdist.linux-armv7l/wheel/topaz/model/features 2022-03-07T18:13:58,940 copying build/lib/topaz/model/__init__.py -> build/bdist.linux-armv7l/wheel/topaz/model 2022-03-07T18:13:58,943 copying build/lib/topaz/model/generative.py -> build/bdist.linux-armv7l/wheel/topaz/model 2022-03-07T18:13:58,947 copying build/lib/topaz/model/utils.py -> build/bdist.linux-armv7l/wheel/topaz/model 2022-03-07T18:13:58,952 copying build/lib/topaz/model/factory.py -> build/bdist.linux-armv7l/wheel/topaz/model 2022-03-07T18:13:58,956 copying build/lib/topaz/denoise.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:58,966 creating build/bdist.linux-armv7l/wheel/topaz/gui 2022-03-07T18:13:58,968 copying build/lib/topaz/gui/topaz.html -> build/bdist.linux-armv7l/wheel/topaz/gui 2022-03-07T18:13:59,025 copying build/lib/topaz/stats.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:59,032 copying build/lib/topaz/cuda.py -> build/bdist.linux-armv7l/wheel/topaz 2022-03-07T18:13:59,036 running install_egg_info 2022-03-07T18:13:59,063 Copying topaz_em.egg-info to build/bdist.linux-armv7l/wheel/topaz_em-0.2.5a0-py3.5.egg-info 2022-03-07T18:13:59,094 running install_scripts 2022-03-07T18:13:59,296 creating build/bdist.linux-armv7l/wheel/topaz_em-0.2.5a0.dist-info/WHEEL 2022-03-07T18:14:17,663 Building wheel for topaz-em (setup.py): finished with status 'done' 2022-03-07T18:14:18,459 Created wheel for topaz-em: filename=topaz_em-0.2.5a0-py3-none-any.whl size=48174346 sha256=40669a56d2963f8562b92b6384e04ddea6c49a71b42acd170fcd8e746daf07ea 2022-03-07T18:14:18,460 Stored in directory: /tmp/pip-ephem-wheel-cache-l5f5vf6q/wheels/b0/0c/f9/3bf4986e09a210137033e3b6ec23243626b1150ebfa83929c0 2022-03-07T18:14:18,506 Successfully built topaz-em 2022-03-07T18:14:26,844 Removed build tracker: '/tmp/pip-req-tracker-2ewors01'