2022-03-14T16:41:07,143 Created temporary directory: /tmp/pip-ephem-wheel-cache-cpmhvmc5 2022-03-14T16:41:07,149 Created temporary directory: /tmp/pip-req-tracker-mbg_1o7o 2022-03-14T16:41:07,149 Initialized build tracking at /tmp/pip-req-tracker-mbg_1o7o 2022-03-14T16:41:07,150 Created build tracker: /tmp/pip-req-tracker-mbg_1o7o 2022-03-14T16:41:07,150 Entered build tracker: /tmp/pip-req-tracker-mbg_1o7o 2022-03-14T16:41:07,151 Created temporary directory: /tmp/pip-wheel-mq5byxnb 2022-03-14T16:41:07,221 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-14T16:41:07,230 2 location(s) to search for versions of mobileelementfinder: 2022-03-14T16:41:07,230 * https://pypi.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,230 * https://www.piwheels.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,231 Fetching project page and analyzing links: https://pypi.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,232 Getting page https://pypi.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,236 Found index url https://pypi.org/simple 2022-03-14T16:41:07,352 Found link https://files.pythonhosted.org/packages/df/f7/98767912a95e5b91d6b1d3cdd9f397ab90d0a2516aea383692f8a645fc75/MobileElementFinder-1.0.0.tar.gz#sha256=48c94ea5bbe9b2c05bf11ed34819c35c0f4f37d5cbd0a97c0ccab05d9fbd345e (from https://pypi.org/simple/mobileelementfinder/) (requires-python:>=3.6), version: 1.0.0 2022-03-14T16:41:07,353 Found link https://files.pythonhosted.org/packages/c9/e8/9f25afb893243348bdf06c1feaaa9d04a916fe7a89aa350a055faf5c6da1/MobileElementFinder-1.0.1.tar.gz#sha256=db6bfa577e076c07a362c4147e964018937a0aa2430d0070daed7ec7db5026df (from https://pypi.org/simple/mobileelementfinder/) (requires-python:>=3.6), version: 1.0.1 2022-03-14T16:41:07,355 Found link https://files.pythonhosted.org/packages/13/91/935495eebbb43772a335b5c15fea699001fcdd841f7c2cd0ee083afa50ce/MobileElementFinder-1.0.2.tar.gz#sha256=53b78c0ff9e74b5d5c30dec2943ed2c93fc1fe4fa7ec3a1b4f5fc5b0ba343e6f (from https://pypi.org/simple/mobileelementfinder/) (requires-python:>=3.6), version: 1.0.2 2022-03-14T16:41:07,356 Found link https://files.pythonhosted.org/packages/78/68/306cc8a5eb3f043847cebdac200c1b6c064e375f0150a527e3e662f080ed/MobileElementFinder-1.0.3.tar.gz#sha256=e28f9c58901717bd7e633c9113b89b6f4064b4212dd0202ef0d24436d3e65b5d (from https://pypi.org/simple/mobileelementfinder/) (requires-python:>=3.6), version: 1.0.3 2022-03-14T16:41:07,358 Found link https://files.pythonhosted.org/packages/03/80/6b8f768e21bfc5efeda866a3de6957d675e1b48445138f9f44d9494da765/MobileElementFinder-1.0.4.tar.gz#sha256=40d6ae2d2d97e56d06683ced7f55c64313daf5ade98a2230c895cf3a8a7213db (from https://pypi.org/simple/mobileelementfinder/) (requires-python:>=3.6), version: 1.0.4 2022-03-14T16:41:07,358 Fetching project page and analyzing links: https://www.piwheels.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,359 Getting page https://www.piwheels.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,361 Found index url https://www.piwheels.org/simple 2022-03-14T16:41:07,583 Skipping link: No binaries permitted for mobileelementfinder: https://www.piwheels.org/simple/mobileelementfinder/MobileElementFinder-1.0.0-py3-none-any.whl#sha256=70a34ac3c82f6fcfc2b63f8aa8a7361791b64b9561d1998535bc312ec8e05797 (from https://www.piwheels.org/simple/mobileelementfinder/) (requires-python:>=3.6) 2022-03-14T16:41:07,584 Skipping link: No binaries permitted for mobileelementfinder: https://www.piwheels.org/simple/mobileelementfinder/MobileElementFinder-1.0.1-py3-none-any.whl#sha256=c43807b074b5d3f6fd8dff9efc793cb63318005202f4377410af2cd33d6f2be5 (from https://www.piwheels.org/simple/mobileelementfinder/) (requires-python:>=3.6) 2022-03-14T16:41:07,584 Skipping link: No binaries permitted for mobileelementfinder: https://www.piwheels.org/simple/mobileelementfinder/MobileElementFinder-1.0.2-py3-none-any.whl#sha256=77f1499646ee7d5c35b92f65cd86c212d3eadb332bbfa1ac90ed298c875b78b6 (from https://www.piwheels.org/simple/mobileelementfinder/) (requires-python:>=3.6) 2022-03-14T16:41:07,585 Skipping link: No binaries permitted for mobileelementfinder: https://www.piwheels.org/simple/mobileelementfinder/MobileElementFinder-1.0.3-py3-none-any.whl#sha256=94b42a9b265b064d09d92a59fa79a526a2a45006c95470806f47731e13d7f14a (from https://www.piwheels.org/simple/mobileelementfinder/) (requires-python:>=3.6) 2022-03-14T16:41:07,585 Skipping link: not a file: https://www.piwheels.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,586 Skipping link: not a file: https://pypi.org/simple/mobileelementfinder/ 2022-03-14T16:41:07,621 Given no hashes to check 1 links for project 'mobileelementfinder': discarding no candidates 2022-03-14T16:41:07,653 Collecting mobileelementfinder==1.0.4 2022-03-14T16:41:07,657 Created temporary directory: /tmp/pip-unpack-yw1frmg8 2022-03-14T16:41:07,910 Downloading MobileElementFinder-1.0.4.tar.gz (43 kB) 2022-03-14T16:41:08,081 Added mobileelementfinder==1.0.4 from https://files.pythonhosted.org/packages/03/80/6b8f768e21bfc5efeda866a3de6957d675e1b48445138f9f44d9494da765/MobileElementFinder-1.0.4.tar.gz#sha256=40d6ae2d2d97e56d06683ced7f55c64313daf5ade98a2230c895cf3a8a7213db to build tracker '/tmp/pip-req-tracker-mbg_1o7o' 2022-03-14T16:41:08,097 Created temporary directory: /tmp/pip-build-env-f2hfq3vy 2022-03-14T16:41:08,111 Created temporary directory: /tmp/pip-standalone-pip-5olt37sv 2022-03-14T16:41:10,288 Installing build dependencies: started 2022-03-14T16:41:10,290 Running command pip subprocess to install build dependencies 2022-03-14T16:41:20,327 Using pip 22.0.3 from /tmp/pip-standalone-pip-5olt37sv/__env_pip__.zip/pip (python 3.7) 2022-03-14T16:41:21,736 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-14T16:41:25,881 Collecting setuptools 2022-03-14T16:41:26,130 Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.9.3-py3-none-any.whl (1.1 MB) 2022-03-14T16:41:27,089 Collecting setuptools_scm 2022-03-14T16:41:27,124 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-6.4.2-py3-none-any.whl (37 kB) 2022-03-14T16:41:27,675 Collecting wheel 2022-03-14T16:41:27,709 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-03-14T16:41:28,711 Collecting pip 2022-03-14T16:41:29,169 Using cached https://www.piwheels.org/simple/pip/pip-22.0.4-py3-none-any.whl (2.1 MB) 2022-03-14T16:41:29,847 Collecting packaging>=20.0 2022-03-14T16:41:29,885 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-03-14T16:41:30,179 Collecting tomli>=1.0.0 2022-03-14T16:41:30,210 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-03-14T16:41:30,929 Collecting pyparsing!=3.0.5,>=2.0.2 2022-03-14T16:41:30,972 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.7-py3-none-any.whl (98 kB) 2022-03-14T16:41:36,042 Installing collected packages: wheel, tomli, setuptools, pyparsing, pip, packaging, setuptools_scm 2022-03-14T16:41:36,309 Creating /tmp/pip-build-env-f2hfq3vy/overlay/bin 2022-03-14T16:41:36,313 changing mode of /tmp/pip-build-env-f2hfq3vy/overlay/bin/wheel to 755 2022-03-14T16:41:51,151 changing mode of /tmp/pip-build-env-f2hfq3vy/overlay/bin/pip to 755 2022-03-14T16:41:51,155 changing mode of /tmp/pip-build-env-f2hfq3vy/overlay/bin/pip3 to 755 2022-03-14T16:41:51,160 changing mode of /tmp/pip-build-env-f2hfq3vy/overlay/bin/pip3.7 to 755 2022-03-14T16:41:51,759 Successfully installed packaging-21.3 pip-22.0.4 pyparsing-3.0.7 setuptools-60.9.3 setuptools_scm-6.4.2 tomli-2.0.1 wheel-0.37.1 2022-03-14T16:41:51,929 WARNING: You are using pip version 22.0.3; however, version 22.0.4 is available. 2022-03-14T16:41:51,930 You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command. 2022-03-14T16:41:52,449 Installing build dependencies: finished with status 'done' 2022-03-14T16:41:52,476 Getting requirements to build wheel: started 2022-03-14T16:41:52,478 Running command Getting requirements to build wheel 2022-03-14T16:41:54,107 Getting requirements to build wheel: finished with status 'done' 2022-03-14T16:41:54,157 Created temporary directory: /tmp/pip-standalone-pip-ra29wqew 2022-03-14T16:41:56,295 Installing backend dependencies: started 2022-03-14T16:41:56,297 Running command pip subprocess to install backend dependencies 2022-03-14T16:42:06,323 Using pip 22.0.3 from /tmp/pip-standalone-pip-ra29wqew/__env_pip__.zip/pip (python 3.7) 2022-03-14T16:42:07,746 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-14T16:42:08,228 Collecting setuptools-markdown 2022-03-14T16:42:08,282 Downloading https://www.piwheels.org/simple/setuptools-markdown/setuptools_markdown-0.4.1-py2.py3-none-any.whl (4.2 kB) 2022-03-14T16:42:08,574 Collecting pypandoc 2022-03-14T16:42:08,621 Downloading https://www.piwheels.org/simple/pypandoc/pypandoc-1.7.2-py2.py3-none-any.whl (29 kB) 2022-03-14T16:42:12,808 Installing collected packages: pypandoc, setuptools-markdown 2022-03-14T16:42:13,028 Successfully installed pypandoc-1.7.2 setuptools-markdown-0.4.1 2022-03-14T16:42:13,193 WARNING: You are using pip version 22.0.3; however, version 22.0.4 is available. 2022-03-14T16:42:13,193 You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command. 2022-03-14T16:42:13,592 Installing backend dependencies: finished with status 'done' 2022-03-14T16:42:13,614 Created temporary directory: /tmp/pip-modern-metadata-811kojd1 2022-03-14T16:42:13,620 Preparing metadata (pyproject.toml): started 2022-03-14T16:42:13,622 Running command Preparing metadata (pyproject.toml) 2022-03-14T16:42:15,553 long_description_markdown_filename: dist = ; attr = 'long_description_markdown_filename'; value = 'README.md' 2022-03-14T16:42:15,554 markdown_filename = 'README.md' 2022-03-14T16:42:16,292 running dist_info 2022-03-14T16:42:16,323 creating /tmp/pip-modern-metadata-811kojd1/MobileElementFinder.egg-info 2022-03-14T16:42:16,339 writing manifest file '/tmp/pip-modern-metadata-811kojd1/MobileElementFinder.egg-info/SOURCES.txt' 2022-03-14T16:42:16,410 listing git files failed - pretending there aren't any 2022-03-14T16:42:16,442 warning: no previously-included files found matching 'Dockerfile' 2022-03-14T16:42:16,443 warning: no previously-included files found matching 'bitbucket-pipelines.yml' 2022-03-14T16:42:16,444 warning: no previously-included files found matching '*.sh' 2022-03-14T16:42:16,444 warning: no previously-included files found matching 'requirements*' 2022-03-14T16:42:16,445 warning: no previously-included files found matching 'Makefile' 2022-03-14T16:42:16,446 warning: no previously-included files found matching '.*' 2022-03-14T16:42:16,447 no previously-included directories found matching 'scripts' 2022-03-14T16:42:16,448 no previously-included directories found matching '*.egg-info' 2022-03-14T16:42:16,449 no previously-included directories found matching 'tests*' 2022-03-14T16:42:16,450 no previously-included directories found matching 'volumes*' 2022-03-14T16:42:16,451 no previously-included directories found matching 'conda*' 2022-03-14T16:42:16,457 writing manifest file '/tmp/pip-modern-metadata-811kojd1/MobileElementFinder.egg-info/SOURCES.txt' 2022-03-14T16:42:16,770 Preparing metadata (pyproject.toml): finished with status 'done' 2022-03-14T16:42:16,786 Source in /tmp/pip-wheel-mq5byxnb/mobileelementfinder_9a8d480b88a94a3cad33707836ec1ae3 has version 1.0.4, which satisfies requirement mobileelementfinder==1.0.4 from https://files.pythonhosted.org/packages/03/80/6b8f768e21bfc5efeda866a3de6957d675e1b48445138f9f44d9494da765/MobileElementFinder-1.0.4.tar.gz#sha256=40d6ae2d2d97e56d06683ced7f55c64313daf5ade98a2230c895cf3a8a7213db 2022-03-14T16:42:16,788 Removed mobileelementfinder==1.0.4 from https://files.pythonhosted.org/packages/03/80/6b8f768e21bfc5efeda866a3de6957d675e1b48445138f9f44d9494da765/MobileElementFinder-1.0.4.tar.gz#sha256=40d6ae2d2d97e56d06683ced7f55c64313daf5ade98a2230c895cf3a8a7213db from build tracker '/tmp/pip-req-tracker-mbg_1o7o' 2022-03-14T16:42:16,803 Created temporary directory: /tmp/pip-unpack-ih2cquju 2022-03-14T16:42:16,804 Building wheels for collected packages: mobileelementfinder 2022-03-14T16:42:16,813 Created temporary directory: /tmp/pip-wheel-ipaxcnav 2022-03-14T16:42:16,814 Destination directory: /tmp/pip-wheel-ipaxcnav 2022-03-14T16:42:16,819 Building wheel for mobileelementfinder (pyproject.toml): started 2022-03-14T16:42:16,821 Running command Building wheel for mobileelementfinder (pyproject.toml) 2022-03-14T16:42:18,744 long_description_markdown_filename: dist = ; attr = 'long_description_markdown_filename'; value = 'README.md' 2022-03-14T16:42:18,746 markdown_filename = 'README.md' 2022-03-14T16:42:19,495 running bdist_wheel 2022-03-14T16:42:19,945 running build 2022-03-14T16:42:19,945 running build_py 2022-03-14T16:42:19,954 creating build 2022-03-14T16:42:19,954 creating build/lib 2022-03-14T16:42:19,955 creating build/lib/me_finder 2022-03-14T16:42:19,957 copying me_finder/version.py -> build/lib/me_finder 2022-03-14T16:42:19,961 copying me_finder/cli.py -> build/lib/me_finder 2022-03-14T16:42:19,965 copying me_finder/context.py -> build/lib/me_finder 2022-03-14T16:42:19,968 copying me_finder/errors.py -> build/lib/me_finder 2022-03-14T16:42:19,971 copying me_finder/prediction.py -> build/lib/me_finder 2022-03-14T16:42:19,976 copying me_finder/io.py -> build/lib/me_finder 2022-03-14T16:42:19,980 copying me_finder/result.py -> build/lib/me_finder 2022-03-14T16:42:19,983 copying me_finder/shell.py -> build/lib/me_finder 2022-03-14T16:42:19,986 copying me_finder/__init__.py -> build/lib/me_finder 2022-03-14T16:42:19,989 copying me_finder/converters.py -> build/lib/me_finder 2022-03-14T16:42:19,994 creating build/lib/me_finder/tools 2022-03-14T16:42:19,995 copying me_finder/tools/kma.py -> build/lib/me_finder/tools 2022-03-14T16:42:19,999 copying me_finder/tools/blast.py -> build/lib/me_finder/tools 2022-03-14T16:42:20,003 copying me_finder/tools/hmmer.py -> build/lib/me_finder/tools 2022-03-14T16:42:20,006 copying me_finder/tools/__init__.py -> build/lib/me_finder/tools 2022-03-14T16:42:20,011 creating build/lib/me_finder/predictor 2022-03-14T16:42:20,012 copying me_finder/predictor/types.py -> build/lib/me_finder/predictor 2022-03-14T16:42:20,016 copying me_finder/predictor/parse.py -> build/lib/me_finder/predictor 2022-03-14T16:42:20,020 copying me_finder/predictor/putative.py -> build/lib/me_finder/predictor 2022-03-14T16:42:20,024 copying me_finder/predictor/detect.py -> build/lib/me_finder/predictor 2022-03-14T16:42:20,028 copying me_finder/predictor/__init__.py -> build/lib/me_finder/predictor 2022-03-14T16:42:20,031 running egg_info 2022-03-14T16:42:20,121 listing git files failed - pretending there aren't any 2022-03-14T16:42:20,153 warning: no previously-included files found matching 'Dockerfile' 2022-03-14T16:42:20,154 warning: no previously-included files found matching 'bitbucket-pipelines.yml' 2022-03-14T16:42:20,155 warning: no previously-included files found matching '*.sh' 2022-03-14T16:42:20,156 warning: no previously-included files found matching 'requirements*' 2022-03-14T16:42:20,157 warning: no previously-included files found matching 'Makefile' 2022-03-14T16:42:20,158 warning: no previously-included files found matching '.*' 2022-03-14T16:42:20,159 no previously-included directories found matching 'scripts' 2022-03-14T16:42:20,161 no previously-included directories found matching 'tests*' 2022-03-14T16:42:20,162 no previously-included directories found matching 'volumes*' 2022-03-14T16:42:20,163 no previously-included directories found matching 'conda*' 2022-03-14T16:42:20,170 writing manifest file 'MobileElementFinder.egg-info/SOURCES.txt' 2022-03-14T16:42:20,174 copying me_finder/config.ini -> build/lib/me_finder 2022-03-14T16:42:20,178 copying me_finder/logging.yml -> build/lib/me_finder 2022-03-14T16:42:20,202 running install 2022-03-14T16:42:20,265 running install_lib 2022-03-14T16:42:20,273 creating build/bdist.linux-armv7l 2022-03-14T16:42:20,273 creating build/bdist.linux-armv7l/wheel 2022-03-14T16:42:20,277 creating build/bdist.linux-armv7l/wheel/me_finder 2022-03-14T16:42:20,283 creating build/bdist.linux-armv7l/wheel/me_finder/tools 2022-03-14T16:42:20,342 creating build/bdist.linux-armv7l/wheel/me_finder/predictor 2022-03-14T16:42:20,362 running install_egg_info 2022-03-14T16:42:20,371 Copying MobileElementFinder.egg-info to build/bdist.linux-armv7l/wheel/MobileElementFinder-1.0.4-py3.7.egg-info 2022-03-14T16:42:20,396 running install_scripts 2022-03-14T16:42:20,851 Building wheel for mobileelementfinder (pyproject.toml): finished with status 'done' 2022-03-14T16:42:20,867 Created wheel for mobileelementfinder: filename=MobileElementFinder-1.0.4-py3-none-any.whl size=55174 sha256=8a3b4e8f2cb78463d8ea5c66905dd9ae934abfc684626d7e39ab265358baa908 2022-03-14T16:42:20,869 Stored in directory: /tmp/pip-ephem-wheel-cache-cpmhvmc5/wheels/0c/f0/21/f88946ad555fa86624890bac5840ecedbf7e0fefdb4f60652d 2022-03-14T16:42:20,900 Successfully built mobileelementfinder 2022-03-14T16:42:20,911 Removed build tracker: '/tmp/pip-req-tracker-mbg_1o7o'