2022-03-15T14:36:04,238 Created temporary directory: /tmp/pip-ephem-wheel-cache-v9ag3ajc 2022-03-15T14:36:04,244 Created temporary directory: /tmp/pip-req-tracker-hvz4dnd5 2022-03-15T14:36:04,245 Initialized build tracking at /tmp/pip-req-tracker-hvz4dnd5 2022-03-15T14:36:04,245 Created build tracker: /tmp/pip-req-tracker-hvz4dnd5 2022-03-15T14:36:04,246 Entered build tracker: /tmp/pip-req-tracker-hvz4dnd5 2022-03-15T14:36:04,247 Created temporary directory: /tmp/pip-wheel-ytmkkqqw 2022-03-15T14:36:04,315 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-15T14:36:04,323 2 location(s) to search for versions of anndata: 2022-03-15T14:36:04,323 * https://pypi.org/simple/anndata/ 2022-03-15T14:36:04,323 * https://www.piwheels.org/simple/anndata/ 2022-03-15T14:36:04,324 Fetching project page and analyzing links: https://pypi.org/simple/anndata/ 2022-03-15T14:36:04,325 Getting page https://pypi.org/simple/anndata/ 2022-03-15T14:36:04,329 Found index url 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https://www.piwheels.org/simple/anndata/anndata-0.8.0rc1-py3-none-any.whl#sha256=74c0ef1beafc0efb1ab7fedf269340cc08c1d43a65297f68cd577f211edd6806 (from https://www.piwheels.org/simple/anndata/) (requires-python:>=3.7) 2022-03-15T14:36:04,892 Skipping link: not a file: https://www.piwheels.org/simple/anndata/ 2022-03-15T14:36:04,893 Skipping link: not a file: https://pypi.org/simple/anndata/ 2022-03-15T14:36:04,955 Given no hashes to check 1 links for project 'anndata': discarding no candidates 2022-03-15T14:36:04,988 Collecting anndata==0.8.0 2022-03-15T14:36:04,992 Created temporary directory: /tmp/pip-unpack-x0a3dx67 2022-03-15T14:36:05,229 Downloading anndata-0.8.0.tar.gz (84 kB) 2022-03-15T14:36:05,479 Added anndata==0.8.0 from https://files.pythonhosted.org/packages/7c/5d/f6135ba817dfae4bbd695f6eb5602d23faa62b74b16e4ee9951944378dac/anndata-0.8.0.tar.gz#sha256=94d2cc6f76c0317c0ac28564e3092b313b7ad19c737d66701961f3e620b9066e to build tracker '/tmp/pip-req-tracker-hvz4dnd5' 2022-03-15T14:36:05,505 Created temporary directory: /tmp/pip-build-env-8t1ddntj 2022-03-15T14:36:05,520 Created temporary directory: /tmp/pip-standalone-pip-dh3o8nio 2022-03-15T14:36:07,738 Installing build dependencies: started 2022-03-15T14:36:07,740 Running command pip subprocess to install build dependencies 2022-03-15T14:36:17,918 Using pip 22.0.3 from /tmp/pip-standalone-pip-dh3o8nio/__env_pip__.zip/pip (python 3.7) 2022-03-15T14:36:19,286 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-15T14:36:19,928 Collecting flit_core<4,>=3.4 2022-03-15T14:36:19,969 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.7.1-py3-none-any.whl (60 kB) 2022-03-15T14:36:20,921 Collecting setuptools_scm 2022-03-15T14:36:20,963 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-6.4.2-py3-none-any.whl (37 kB) 2022-03-15T14:36:21,995 Collecting importlib_metadata>=0.7 2022-03-15T14:36:22,026 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-4.11.3-py3-none-any.whl (18 kB) 2022-03-15T14:36:25,904 Collecting setuptools 2022-03-15T14:36:26,152 Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.9.3-py3-none-any.whl (1.1 MB) 2022-03-15T14:36:26,526 Collecting tomli>=1.0.0 2022-03-15T14:36:26,558 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-03-15T14:36:26,984 Collecting packaging>=20.0 2022-03-15T14:36:27,022 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-03-15T14:36:27,569 Collecting zipp>=0.5 2022-03-15T14:36:27,600 Using cached https://www.piwheels.org/simple/zipp/zipp-3.7.0-py3-none-any.whl (5.3 kB) 2022-03-15T14:36:27,832 Collecting typing-extensions>=3.6.4 2022-03-15T14:36:27,864 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.1.1-py3-none-any.whl (26 kB) 2022-03-15T14:36:28,557 Collecting pyparsing!=3.0.5,>=2.0.2 2022-03-15T14:36:28,597 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.7-py3-none-any.whl (98 kB) 2022-03-15T14:36:33,610 Installing collected packages: zipp, typing-extensions, tomli, setuptools, pyparsing, flit_core, packaging, importlib_metadata, setuptools_scm 2022-03-15T14:36:39,613 Successfully installed flit_core-3.7.1 importlib_metadata-4.11.3 packaging-21.3 pyparsing-3.0.7 setuptools-60.9.3 setuptools_scm-6.4.2 tomli-2.0.1 typing-extensions-4.1.1 zipp-3.7.0 2022-03-15T14:36:39,781 WARNING: You are using pip version 22.0.3; however, version 22.0.4 is available. 2022-03-15T14:36:39,781 You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command. 2022-03-15T14:36:40,309 Installing build dependencies: finished with status 'done' 2022-03-15T14:36:40,335 Getting requirements to build wheel: started 2022-03-15T14:36:40,337 Running command Getting requirements to build wheel 2022-03-15T14:36:41,020 Getting requirements to build wheel: finished with status 'done' 2022-03-15T14:36:41,657 Created temporary directory: /tmp/pip-standalone-pip-ko58abhq 2022-03-15T14:36:43,736 Installing backend dependencies: started 2022-03-15T14:36:43,738 Running command pip subprocess to install backend dependencies 2022-03-15T14:36:53,869 Using pip 22.0.3 from /tmp/pip-standalone-pip-ko58abhq/__env_pip__.zip/pip (python 3.7) 2022-03-15T14:36:55,328 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-15T14:36:55,330 Ignoring pytest-cov: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,332 Ignoring zarr: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,334 Ignoring pytest: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,336 Ignoring boltons: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,338 Ignoring scanpy: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,340 Ignoring joblib: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,342 Ignoring dask: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,343 Ignoring black: markers 'extra == "dev"' don't match your environment 2022-03-15T14:36:55,345 Ignoring loompy: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,347 Ignoring sklearn: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,349 Ignoring openpyxl: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,351 Ignoring scanpydoc: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:55,353 Ignoring docutils: markers 'extra == "dev"' don't match your environment 2022-03-15T14:36:55,355 Ignoring sphinx-autodoc-typehints: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:55,356 Ignoring matplotlib: markers 'extra == "test"' don't match your environment 2022-03-15T14:36:55,358 Ignoring sphinx: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:55,360 Ignoring sphinx-rtd-theme: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:55,362 Ignoring nbsphinx: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:55,364 Ignoring zarr: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:55,366 Ignoring sphinx_issues: markers 'extra == "doc"' don't match your environment 2022-03-15T14:36:56,229 Collecting natsort 2022-03-15T14:36:56,296 Using cached https://www.piwheels.org/simple/natsort/natsort-8.1.0-py3-none-any.whl (37 kB) 2022-03-15T14:36:57,761 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/29/e3/6bd596d81eaf9f5b35398fdac0c535efadd9bbf8d0f859739badf9f90c63/pandas-1.4.0rc0.tar.gz#sha256=c0d453fda0a87d51f5fe65c16a89b64f13a736f4f17c0202cfcff67e6b341a57 (from https://pypi.org/simple/pandas/) (requires-python:>=3.8) 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2022-03-15T14:37:10,535 Link requires a different Python (3.7.3 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/b4/a2/4faa34bf0cdbefd5c706625f1234987795f368eb4e97bde9d6f46860843e/scipy-1.8.0.tar.gz#sha256=31d4f2d6b724bc9a98e527b5849b8a7e589bf1ea630c33aa563eda912c9ff0bd (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2022-03-15T14:37:10,968 Collecting scipy>1.4 2022-03-15T14:37:23,304 Using cached https://www.piwheels.org/simple/scipy/scipy-1.7.3-cp37-cp37m-linux_armv7l.whl (65.5 MB) 2022-03-15T14:37:30,329 Collecting h5py>=3 2022-03-15T14:37:31,427 Using cached https://www.piwheels.org/simple/h5py/h5py-3.6.0-cp37-cp37m-linux_armv7l.whl (5.4 MB) 2022-03-15T14:37:33,000 Collecting pytz>=2017.3 2022-03-15T14:37:33,140 Using cached https://www.piwheels.org/simple/pytz/pytz-2021.3-py3-none-any.whl (511 kB) 2022-03-15T14:37:33,506 Collecting python-dateutil>=2.7.3 2022-03-15T14:37:33,582 Using cached 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/tmp/pip-build-env-8t1ddntj/normal/bin/natsort to 755 2022-03-15T14:39:06,609 Successfully installed cached-property-1.5.2 h5py-3.6.0 natsort-8.1.0 numpy-1.21.4 pandas-1.3.5 python-dateutil-2.8.2 pytz-2021.3 scipy-1.7.3 six-1.16.0 2022-03-15T14:39:06,796 WARNING: You are using pip version 22.0.3; however, version 22.0.4 is available. 2022-03-15T14:39:06,796 You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command. 2022-03-15T14:39:07,456 Installing backend dependencies: finished with status 'done' 2022-03-15T14:39:07,477 Created temporary directory: /tmp/pip-modern-metadata-ldmbxwb7 2022-03-15T14:39:07,485 Preparing metadata (pyproject.toml): started 2022-03-15T14:39:07,487 Running command Preparing metadata (pyproject.toml) 2022-03-15T14:39:09,619 Preparing metadata (pyproject.toml): finished with status 'done' 2022-03-15T14:39:09,635 Source in /tmp/pip-wheel-ytmkkqqw/anndata_3e7b410f09e343598f5f0cdfdc6ef0a0 has version 0.8.0, which satisfies requirement anndata==0.8.0 from https://files.pythonhosted.org/packages/7c/5d/f6135ba817dfae4bbd695f6eb5602d23faa62b74b16e4ee9951944378dac/anndata-0.8.0.tar.gz#sha256=94d2cc6f76c0317c0ac28564e3092b313b7ad19c737d66701961f3e620b9066e 2022-03-15T14:39:09,638 Removed anndata==0.8.0 from https://files.pythonhosted.org/packages/7c/5d/f6135ba817dfae4bbd695f6eb5602d23faa62b74b16e4ee9951944378dac/anndata-0.8.0.tar.gz#sha256=94d2cc6f76c0317c0ac28564e3092b313b7ad19c737d66701961f3e620b9066e from build tracker '/tmp/pip-req-tracker-hvz4dnd5' 2022-03-15T14:39:09,652 Created temporary directory: /tmp/pip-unpack-xvf6uva3 2022-03-15T14:39:09,653 Building wheels for collected packages: anndata 2022-03-15T14:39:09,662 Created temporary directory: /tmp/pip-wheel-pgk962mw 2022-03-15T14:39:09,663 Destination directory: /tmp/pip-wheel-pgk962mw 2022-03-15T14:39:09,668 Building wheel for anndata (pyproject.toml): started 2022-03-15T14:39:09,670 Running command Building wheel for anndata (pyproject.toml) 2022-03-15T14:39:11,847 Building wheel for anndata (pyproject.toml): finished with status 'done' 2022-03-15T14:39:11,862 Created wheel for anndata: filename=anndata-0.8.0-py3-none-any.whl size=96088 sha256=0a5696b5c4f454b40fa08f8c8f2391b657ddeb9753b269d295214be1ca379c27 2022-03-15T14:39:11,865 Stored in directory: /tmp/pip-ephem-wheel-cache-v9ag3ajc/wheels/27/d3/6c/902650de9b6dd07804d0c3e52c47dd8c1cdf6573a549530353 2022-03-15T14:39:11,891 Successfully built anndata 2022-03-15T14:39:11,906 Removed build tracker: '/tmp/pip-req-tracker-hvz4dnd5'