2022-03-17T22:02:27,244 Created temporary directory: /tmp/pip-ephem-wheel-cache-az_k3171 2022-03-17T22:02:27,250 Created temporary directory: /tmp/pip-req-tracker-800ms5mu 2022-03-17T22:02:27,250 Initialized build tracking at /tmp/pip-req-tracker-800ms5mu 2022-03-17T22:02:27,251 Created build tracker: /tmp/pip-req-tracker-800ms5mu 2022-03-17T22:02:27,251 Entered build tracker: /tmp/pip-req-tracker-800ms5mu 2022-03-17T22:02:27,252 Created temporary directory: /tmp/pip-wheel-ju5ftf9k 2022-03-17T22:02:27,320 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-17T22:02:27,328 2 location(s) to search for versions of pywfa: 2022-03-17T22:02:27,328 * https://pypi.org/simple/pywfa/ 2022-03-17T22:02:27,328 * https://www.piwheels.org/simple/pywfa/ 2022-03-17T22:02:27,329 Fetching project page and analyzing links: https://pypi.org/simple/pywfa/ 2022-03-17T22:02:27,331 Getting page https://pypi.org/simple/pywfa/ 2022-03-17T22:02:27,334 Found index url https://pypi.org/simple 2022-03-17T22:02:27,449 Found link https://files.pythonhosted.org/packages/a2/27/edbaabe18d863b40b4d0cd143105f8d5ef889e0c58ebab5c7a5f80a41830/pywfa-0.2.5.tar.gz#sha256=721bd8fdd44ce9a1b59bbeebe200324c32f3f8916d9198c9fedb056fedccc5a4 (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.2.5 2022-03-17T22:02:27,451 Found link https://files.pythonhosted.org/packages/0f/01/3aea5a52a6a625fb3ef0c31f516dcdb4e89ba12e21a24bd3678532f67dd2/pywfa-0.2.6.tar.gz#sha256=037ceff1ff13b34412feac3564531fdf58b3adf06f241d3fb99b57fa7db7322a (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.2.6 2022-03-17T22:02:27,452 Fetching project page and analyzing links: https://www.piwheels.org/simple/pywfa/ 2022-03-17T22:02:27,452 Getting page https://www.piwheels.org/simple/pywfa/ 2022-03-17T22:02:27,454 Found index url https://www.piwheels.org/simple 2022-03-17T22:02:27,658 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp37-cp37m-linux_armv6l.whl#sha256=b39d17c222708e4ff97f3c3c659a7507d1c9141d6961659a72d6e6a00ad4cf6a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2022-03-17T22:02:27,659 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp37-cp37m-linux_armv7l.whl#sha256=b39d17c222708e4ff97f3c3c659a7507d1c9141d6961659a72d6e6a00ad4cf6a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2022-03-17T22:02:27,660 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp39-cp39-linux_armv6l.whl#sha256=d9c41aea18ead8981e0f0e6710c75bf07ed02642a29ec7308afe0f6a5187083a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2022-03-17T22:02:27,660 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp39-cp39-linux_armv7l.whl#sha256=d9c41aea18ead8981e0f0e6710c75bf07ed02642a29ec7308afe0f6a5187083a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2022-03-17T22:02:27,661 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.6-cp37-cp37m-linux_armv6l.whl#sha256=853686084d3af6af2ffddd3320c0f5627d6347b212a54e626900174e5d21097c (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2022-03-17T22:02:27,661 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.6-cp37-cp37m-linux_armv7l.whl#sha256=853686084d3af6af2ffddd3320c0f5627d6347b212a54e626900174e5d21097c (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2022-03-17T22:02:27,662 Skipping link: not a file: https://www.piwheels.org/simple/pywfa/ 2022-03-17T22:02:27,662 Skipping link: not a file: https://pypi.org/simple/pywfa/ 2022-03-17T22:02:27,706 Given no hashes to check 1 links for project 'pywfa': discarding no candidates 2022-03-17T22:02:27,747 Collecting pywfa==0.2.6 2022-03-17T22:02:27,752 Created temporary directory: /tmp/pip-unpack-bg9lwud1 2022-03-17T22:02:27,842 Downloading pywfa-0.2.6.tar.gz (822 kB) 2022-03-17T22:02:28,908 Added pywfa==0.2.6 from https://files.pythonhosted.org/packages/0f/01/3aea5a52a6a625fb3ef0c31f516dcdb4e89ba12e21a24bd3678532f67dd2/pywfa-0.2.6.tar.gz#sha256=037ceff1ff13b34412feac3564531fdf58b3adf06f241d3fb99b57fa7db7322a to build tracker '/tmp/pip-req-tracker-800ms5mu' 2022-03-17T22:02:28,909 Running setup.py (path:/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/setup.py) egg_info for package pywfa 2022-03-17T22:02:28,911 Created temporary directory: /tmp/pip-pip-egg-info-c3fx13gh 2022-03-17T22:02:28,911 Preparing metadata (setup.py): started 2022-03-17T22:02:28,913 Running command python setup.py egg_info 2022-03-17T22:02:32,115 Libs ['/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib'] 2022-03-17T22:02:32,117 Library dirs ['/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib'] 2022-03-17T22:02:32,117 Include dirs ['.', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/utils', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/wavefront', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/bindings/cpp', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/system', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa'] 2022-03-17T22:02:32,530 running egg_info 2022-03-17T22:02:32,535 creating /tmp/pip-pip-egg-info-c3fx13gh/pywfa.egg-info 2022-03-17T22:02:32,549 writing manifest file '/tmp/pip-pip-egg-info-c3fx13gh/pywfa.egg-info/SOURCES.txt' 2022-03-17T22:02:32,575 warning: manifest_maker: MANIFEST.in, line 2: 'recursive-include' expects ... 2022-03-17T22:02:32,576 warning: no files found matching 'pywfa/tests' 2022-03-17T22:02:32,608 writing manifest file '/tmp/pip-pip-egg-info-c3fx13gh/pywfa.egg-info/SOURCES.txt' 2022-03-17T22:02:32,805 Preparing metadata (setup.py): finished with status 'done' 2022-03-17T22:02:32,814 Source in /tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356 has version 0.2.6, which satisfies requirement pywfa==0.2.6 from https://files.pythonhosted.org/packages/0f/01/3aea5a52a6a625fb3ef0c31f516dcdb4e89ba12e21a24bd3678532f67dd2/pywfa-0.2.6.tar.gz#sha256=037ceff1ff13b34412feac3564531fdf58b3adf06f241d3fb99b57fa7db7322a 2022-03-17T22:02:32,816 Removed pywfa==0.2.6 from https://files.pythonhosted.org/packages/0f/01/3aea5a52a6a625fb3ef0c31f516dcdb4e89ba12e21a24bd3678532f67dd2/pywfa-0.2.6.tar.gz#sha256=037ceff1ff13b34412feac3564531fdf58b3adf06f241d3fb99b57fa7db7322a from build tracker '/tmp/pip-req-tracker-800ms5mu' 2022-03-17T22:02:32,829 Created temporary directory: /tmp/pip-unpack-8cenk6_d 2022-03-17T22:02:32,830 Building wheels for collected packages: pywfa 2022-03-17T22:02:32,839 Created temporary directory: /tmp/pip-wheel-odiwjf7u 2022-03-17T22:02:32,840 Building wheel for pywfa (setup.py): started 2022-03-17T22:02:32,842 Destination directory: /tmp/pip-wheel-odiwjf7u 2022-03-17T22:02:32,842 Running command python setup.py bdist_wheel 2022-03-17T22:02:34,784 Libs ['/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib'] 2022-03-17T22:02:34,785 Library dirs ['/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib'] 2022-03-17T22:02:34,786 Include dirs ['.', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/utils', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/wavefront', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/bindings/cpp', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/system', '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa'] 2022-03-17T22:02:36,386 running bdist_wheel 2022-03-17T22:02:36,395 running build 2022-03-17T22:02:36,396 running build_py 2022-03-17T22:02:36,403 creating build 2022-03-17T22:02:36,404 creating build/lib.linux-armv7l-3.9 2022-03-17T22:02:36,405 creating build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,407 copying pywfa/__init__.py -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,411 creating build/lib.linux-armv7l-3.9/pywfa/tests 2022-03-17T22:02:36,413 copying pywfa/tests/test.py -> build/lib.linux-armv7l-3.9/pywfa/tests 2022-03-17T22:02:36,417 copying pywfa/tests/__init__.py -> build/lib.linux-armv7l-3.9/pywfa/tests 2022-03-17T22:02:36,419 running egg_info 2022-03-17T22:02:36,475 warning: manifest_maker: MANIFEST.in, line 2: 'recursive-include' expects ... 2022-03-17T22:02:36,476 warning: no files found matching 'pywfa/tests' 2022-03-17T22:02:36,508 writing manifest file 'pywfa.egg-info/SOURCES.txt' 2022-03-17T22:02:36,540 copying pywfa/.DS_Store -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,545 copying pywfa/WFA_wrap.c -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,554 copying pywfa/WFA_wrap.pxd -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,559 copying pywfa/align.c -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,594 copying pywfa/align.cpython-38-darwin.so -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,615 copying pywfa/align.pxd -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,618 copying pywfa/align.pyx -> build/lib.linux-armv7l-3.9/pywfa 2022-03-17T22:02:36,624 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib 2022-03-17T22:02:36,624 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,626 copying pywfa/WFA2_lib/alignment/Makefile -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,630 copying pywfa/WFA2_lib/alignment/affine2p_penalties.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,634 copying pywfa/WFA2_lib/alignment/affine2p_penalties.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,638 copying pywfa/WFA2_lib/alignment/affine_penalties.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,641 copying pywfa/WFA2_lib/alignment/affine_penalties.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,645 copying pywfa/WFA2_lib/alignment/cigar.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,651 copying pywfa/WFA2_lib/alignment/cigar.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,655 copying pywfa/WFA2_lib/alignment/linear_penalties.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,658 copying pywfa/WFA2_lib/alignment/score_matrix.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,662 copying pywfa/WFA2_lib/alignment/score_matrix.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/alignment 2022-03-17T22:02:36,666 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,667 copying pywfa/WFA2_lib/build/affine2p_penalties.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,672 copying pywfa/WFA2_lib/build/affine_penalties.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,675 copying pywfa/WFA2_lib/build/bitmap.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,679 copying pywfa/WFA2_lib/build/cigar.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,685 copying pywfa/WFA2_lib/build/commons.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,690 copying pywfa/WFA2_lib/build/dna_text.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,693 copying pywfa/WFA2_lib/build/heatmap.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,698 copying pywfa/WFA2_lib/build/mm_allocator.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,704 copying pywfa/WFA2_lib/build/mm_stack.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,708 copying pywfa/WFA2_lib/build/profiler_counter.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,714 copying pywfa/WFA2_lib/build/profiler_timer.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,720 copying pywfa/WFA2_lib/build/score_matrix.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,725 copying pywfa/WFA2_lib/build/sequence_buffer.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,729 copying pywfa/WFA2_lib/build/string_padded.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,733 copying pywfa/WFA2_lib/build/vector.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,737 copying pywfa/WFA2_lib/build/wavefront.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,742 copying pywfa/WFA2_lib/build/wavefront_align.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,748 copying pywfa/WFA2_lib/build/wavefront_aligner.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,755 copying pywfa/WFA2_lib/build/wavefront_attributes.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,759 copying pywfa/WFA2_lib/build/wavefront_backtrace.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,765 copying pywfa/WFA2_lib/build/wavefront_backtrace_buffer.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,770 copying pywfa/WFA2_lib/build/wavefront_backtrace_offload.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,775 copying pywfa/WFA2_lib/build/wavefront_components.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,782 copying pywfa/WFA2_lib/build/wavefront_compute.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,788 copying pywfa/WFA2_lib/build/wavefront_compute_affine.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,794 copying pywfa/WFA2_lib/build/wavefront_compute_affine2p.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,799 copying pywfa/WFA2_lib/build/wavefront_compute_edit.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,805 copying pywfa/WFA2_lib/build/wavefront_compute_linear.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,811 copying pywfa/WFA2_lib/build/wavefront_debug.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,816 copying pywfa/WFA2_lib/build/wavefront_display.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,822 copying pywfa/WFA2_lib/build/wavefront_extend.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,827 copying pywfa/WFA2_lib/build/wavefront_heuristic.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,833 copying pywfa/WFA2_lib/build/wavefront_pcigar.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,839 copying pywfa/WFA2_lib/build/wavefront_penalties.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,843 copying pywfa/WFA2_lib/build/wavefront_plot.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,848 copying pywfa/WFA2_lib/build/wavefront_slab.o -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/build 2022-03-17T22:02:36,853 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/lib 2022-03-17T22:02:36,854 copying pywfa/WFA2_lib/lib/libwfa.a -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/lib 2022-03-17T22:02:36,897 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,898 copying pywfa/WFA2_lib/system/Makefile -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,902 copying pywfa/WFA2_lib/system/mm_allocator.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,907 copying pywfa/WFA2_lib/system/mm_allocator.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,911 copying pywfa/WFA2_lib/system/mm_stack.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,915 copying pywfa/WFA2_lib/system/mm_stack.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,919 copying pywfa/WFA2_lib/system/profiler_counter.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,924 copying pywfa/WFA2_lib/system/profiler_counter.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,928 copying pywfa/WFA2_lib/system/profiler_timer.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,932 copying pywfa/WFA2_lib/system/profiler_timer.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/system 2022-03-17T22:02:36,936 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,937 copying pywfa/WFA2_lib/utils/Makefile -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,941 copying pywfa/WFA2_lib/utils/bitmap.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,945 copying pywfa/WFA2_lib/utils/bitmap.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,949 copying pywfa/WFA2_lib/utils/commons.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,952 copying pywfa/WFA2_lib/utils/commons.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,957 copying pywfa/WFA2_lib/utils/dna_text.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,961 copying pywfa/WFA2_lib/utils/dna_text.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,964 copying pywfa/WFA2_lib/utils/heatmap.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,969 copying pywfa/WFA2_lib/utils/heatmap.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,972 copying pywfa/WFA2_lib/utils/sequence_buffer.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,976 copying pywfa/WFA2_lib/utils/sequence_buffer.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,980 copying pywfa/WFA2_lib/utils/string_padded.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,984 copying pywfa/WFA2_lib/utils/string_padded.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,988 copying pywfa/WFA2_lib/utils/vector.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,993 copying pywfa/WFA2_lib/utils/vector.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/utils 2022-03-17T22:02:36,997 creating build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:36,998 copying pywfa/WFA2_lib/wavefront/Makefile -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,002 copying pywfa/WFA2_lib/wavefront/wavefront.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,006 copying pywfa/WFA2_lib/wavefront/wavefront.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,011 copying pywfa/WFA2_lib/wavefront/wavefront_align.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,015 copying pywfa/WFA2_lib/wavefront/wavefront_align.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,019 copying pywfa/WFA2_lib/wavefront/wavefront_aligner.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,024 copying pywfa/WFA2_lib/wavefront/wavefront_aligner.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,028 copying pywfa/WFA2_lib/wavefront/wavefront_attributes.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,032 copying pywfa/WFA2_lib/wavefront/wavefront_attributes.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,036 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,041 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,045 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,050 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,055 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,060 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,064 copying pywfa/WFA2_lib/wavefront/wavefront_components.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,068 copying pywfa/WFA2_lib/wavefront/wavefront_components.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,073 copying pywfa/WFA2_lib/wavefront/wavefront_compute.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,078 copying pywfa/WFA2_lib/wavefront/wavefront_compute.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,082 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,086 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,090 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,095 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,098 copying pywfa/WFA2_lib/wavefront/wavefront_compute_edit.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,103 copying pywfa/WFA2_lib/wavefront/wavefront_compute_edit.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,106 copying pywfa/WFA2_lib/wavefront/wavefront_compute_linear.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,111 copying pywfa/WFA2_lib/wavefront/wavefront_compute_linear.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,114 copying pywfa/WFA2_lib/wavefront/wavefront_debug.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,119 copying pywfa/WFA2_lib/wavefront/wavefront_debug.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,123 copying pywfa/WFA2_lib/wavefront/wavefront_display.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,127 copying pywfa/WFA2_lib/wavefront/wavefront_display.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,131 copying pywfa/WFA2_lib/wavefront/wavefront_extend.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,136 copying pywfa/WFA2_lib/wavefront/wavefront_extend.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,140 copying pywfa/WFA2_lib/wavefront/wavefront_heuristic.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,145 copying pywfa/WFA2_lib/wavefront/wavefront_heuristic.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,149 copying pywfa/WFA2_lib/wavefront/wavefront_offset.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,153 copying pywfa/WFA2_lib/wavefront/wavefront_pcigar.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,157 copying pywfa/WFA2_lib/wavefront/wavefront_pcigar.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,161 copying pywfa/WFA2_lib/wavefront/wavefront_penalties.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,166 copying pywfa/WFA2_lib/wavefront/wavefront_penalties.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,170 copying pywfa/WFA2_lib/wavefront/wavefront_plot.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,174 copying pywfa/WFA2_lib/wavefront/wavefront_plot.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,178 copying pywfa/WFA2_lib/wavefront/wavefront_slab.c -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,182 copying pywfa/WFA2_lib/wavefront/wavefront_slab.h -> build/lib.linux-armv7l-3.9/pywfa/WFA2_lib/wavefront 2022-03-17T22:02:37,188 running build_ext 2022-03-17T22:02:37,206 creating build/temp.linux-armv7l-3.9 2022-03-17T22:02:37,206 creating build/temp.linux-armv7l-3.9/pywfa 2022-03-17T22:02:37,209 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I. -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356 -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/utils -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/wavefront -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/bindings/cpp -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/system -I/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa -I/usr/include/python3.9 -c pywfa/align.c -o build/temp.linux-armv7l-3.9/pywfa/align.o -Wno-sign-compare -Wno-unused-function -Wno-unused-result -Wno-ignored-qualifiers -Wno-deprecated-declarations 2022-03-17T22:03:04,954 warning: no library file corresponding to '/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib' found (skipping) 2022-03-17T22:03:04,955 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/pywfa/align.o /tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib/libwfa.a -L/tmp/pip-wheel-ju5ftf9k/pywfa_d00d264ed86449418bbafc45a34c6356/pywfa/WFA2_lib/lib -L/usr/lib -o build/lib.linux-armv7l-3.9/pywfa/align.cpython-39-arm-linux-gnueabihf.so 2022-03-17T22:03:05,308 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-03-17T22:03:05,308 warnings.warn( 2022-03-17T22:03:05,316 running install 2022-03-17T22:03:05,424 make: *** No rule to make target 'clean'. Stop. 2022-03-17T22:03:05,427 running install_lib 2022-03-17T22:03:05,437 creating build/bdist.linux-armv7l 2022-03-17T22:03:05,438 creating build/bdist.linux-armv7l/wheel 2022-03-17T22:03:05,442 creating build/bdist.linux-armv7l/wheel/pywfa 2022-03-17T22:03:05,459 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib 2022-03-17T22:03:05,461 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib/system 2022-03-17T22:03:05,498 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib/lib 2022-03-17T22:03:05,544 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib/build 2022-03-17T22:03:05,708 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib/wavefront 2022-03-17T22:03:05,866 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib/alignment 2022-03-17T22:03:05,902 creating build/bdist.linux-armv7l/wheel/pywfa/WFA2_lib/utils 2022-03-17T22:03:06,049 creating build/bdist.linux-armv7l/wheel/pywfa/tests 2022-03-17T22:03:06,085 running install_egg_info 2022-03-17T22:03:06,102 Copying pywfa.egg-info to build/bdist.linux-armv7l/wheel/pywfa-0.2.6-py3.9.egg-info 2022-03-17T22:03:06,128 running install_scripts 2022-03-17T22:03:08,189 Building wheel for pywfa (setup.py): finished with status 'done' 2022-03-17T22:03:08,233 Created wheel for pywfa: filename=pywfa-0.2.6-cp39-cp39-linux_armv7l.whl size=1234074 sha256=25c2ae021d0c40c5b4c2002e4e94e0f7a48859772505ef4a423d1a881049b28f 2022-03-17T22:03:08,236 Stored in directory: /tmp/pip-ephem-wheel-cache-az_k3171/wheels/df/bf/a7/9f014f132fd3a40f484456a95b848f5c4757cdef0daf73633d 2022-03-17T22:03:08,267 Successfully built pywfa 2022-03-17T22:03:08,374 Removed build tracker: '/tmp/pip-req-tracker-800ms5mu'