2022-03-21T04:29:43,346 Created temporary directory: /tmp/pip-ephem-wheel-cache-ehxnug7n
2022-03-21T04:29:43,351 Created temporary directory: /tmp/pip-req-tracker-bvdzrm5f
2022-03-21T04:29:43,352 Initialized build tracking at /tmp/pip-req-tracker-bvdzrm5f
2022-03-21T04:29:43,352 Created build tracker: /tmp/pip-req-tracker-bvdzrm5f
2022-03-21T04:29:43,353 Entered build tracker: /tmp/pip-req-tracker-bvdzrm5f
2022-03-21T04:29:43,354 Created temporary directory: /tmp/pip-wheel-be49rx0b
2022-03-21T04:29:43,421 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-03-21T04:29:43,429 2 location(s) to search for versions of psmpa:
2022-03-21T04:29:43,429 * https://pypi.org/simple/psmpa/
2022-03-21T04:29:43,429 * https://www.piwheels.org/simple/psmpa/
2022-03-21T04:29:43,430 Fetching project page and analyzing links: https://pypi.org/simple/psmpa/
2022-03-21T04:29:43,431 Getting page https://pypi.org/simple/psmpa/
2022-03-21T04:29:43,435 Found index url https://pypi.org/simple
2022-03-21T04:29:43,550   Skipping link: No binaries permitted for psmpa: https://files.pythonhosted.org/packages/53/e5/70d2de6612aa9532e338c591f74e25ce2ed11bbce7888cab26f99fe2747e/psmpa-1.0.0-py3-none-any.whl#sha256=19a1019c2cd29c943f32a1e6616e2a4fa46a3decefdf8449b8777abb9c352c96 (from https://pypi.org/simple/psmpa/) (requires-python:>=3.8)
2022-03-21T04:29:43,551   Found link https://files.pythonhosted.org/packages/94/c0/048da2f6cc8acb2fa45585b42adf9c959ecc64485cb846c608298b39a32a/psmpa-1.0.0.tar.gz#sha256=a38f5982efaa60a4f4a09fd086217142d913e539f70522063761a8778d70af11 (from https://pypi.org/simple/psmpa/) (requires-python:>=3.8), version: 1.0.0
2022-03-21T04:29:43,552   Skipping link: No binaries permitted for psmpa: https://files.pythonhosted.org/packages/ac/2e/ab04c4331d7bab7aa205449b40bbcedbf9e743087cfcd2e0008bd737119e/psmpa-1.1.1-py3-none-any.whl#sha256=a878dc58a062089cc3d2be07e5f4b362b67da36b18ea91c4e4a8b35ece9300e4 (from https://pypi.org/simple/psmpa/) (requires-python:>=3.8)
2022-03-21T04:29:43,553   Found link https://files.pythonhosted.org/packages/af/2b/bcbafa77c9a21797b881999903e75a948897cdcbbf3ff8c70ea3406c36f1/psmpa-1.1.1.tar.gz#sha256=01efa3057ddcf5d7cb31e2a18ff215f92db9966d78f0e52d97bdc13c7cc7d128 (from https://pypi.org/simple/psmpa/) (requires-python:>=3.8), version: 1.1.1
2022-03-21T04:29:43,554 Fetching project page and analyzing links: https://www.piwheels.org/simple/psmpa/
2022-03-21T04:29:43,555 Getting page https://www.piwheels.org/simple/psmpa/
2022-03-21T04:29:43,557 Found index url https://www.piwheels.org/simple
2022-03-21T04:29:43,771   Skipping link: No binaries permitted for psmpa: https://www.piwheels.org/simple/psmpa/psmpa-1.0.0-py3-none-any.whl#sha256=16219933cedd6ffce00731da9a9576f23b0803b254555a974d8c78fc8076e9fb (from https://www.piwheels.org/simple/psmpa/) (requires-python:>=3.8)
2022-03-21T04:29:43,772 Skipping link: not a file: https://www.piwheels.org/simple/psmpa/
2022-03-21T04:29:43,772 Skipping link: not a file: https://pypi.org/simple/psmpa/
2022-03-21T04:29:43,816 Given no hashes to check 1 links for project 'psmpa': discarding no candidates
2022-03-21T04:29:43,857 Collecting psmpa==1.1.1
2022-03-21T04:29:43,862   Created temporary directory: /tmp/pip-unpack-nq13uq3i
2022-03-21T04:29:44,706   Downloading psmpa-1.1.1.tar.gz (18.8 MB)
2022-03-21T04:29:54,928   Added psmpa==1.1.1 from https://files.pythonhosted.org/packages/af/2b/bcbafa77c9a21797b881999903e75a948897cdcbbf3ff8c70ea3406c36f1/psmpa-1.1.1.tar.gz#sha256=01efa3057ddcf5d7cb31e2a18ff215f92db9966d78f0e52d97bdc13c7cc7d128 to build tracker '/tmp/pip-req-tracker-bvdzrm5f'
2022-03-21T04:29:54,937   Created temporary directory: /tmp/pip-build-env-o1sekk8v
2022-03-21T04:29:54,958   Created temporary directory: /tmp/pip-standalone-pip-9lf7m02k
2022-03-21T04:29:57,175   Installing build dependencies: started
2022-03-21T04:29:57,177   Running command pip subprocess to install build dependencies
2022-03-21T04:30:08,866   Using pip 22.0.3 from /tmp/pip-standalone-pip-9lf7m02k/__env_pip__.zip/pip (python 3.9)
2022-03-21T04:30:10,358   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-03-21T04:30:14,230   Collecting setuptools>=42
2022-03-21T04:30:14,470     Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.10.0-py3-none-any.whl (1.1 MB)
2022-03-21T04:30:15,102   Collecting wheel
2022-03-21T04:30:15,134     Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB)
2022-03-21T04:30:19,074   Installing collected packages: wheel, setuptools
2022-03-21T04:30:19,360     Creating /tmp/pip-build-env-o1sekk8v/overlay/bin
2022-03-21T04:30:19,364     changing mode of /tmp/pip-build-env-o1sekk8v/overlay/bin/wheel to 755
2022-03-21T04:30:23,630   Successfully installed setuptools-60.10.0 wheel-0.37.1
2022-03-21T04:30:23,814   WARNING: You are using pip version 22.0.3; however, version 22.0.4 is available.
2022-03-21T04:30:23,815   You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command.
2022-03-21T04:30:24,301   Installing build dependencies: finished with status 'done'
2022-03-21T04:30:24,328   Getting requirements to build wheel: started
2022-03-21T04:30:24,329   Running command Getting requirements to build wheel
2022-03-21T04:30:26,025   running egg_info
2022-03-21T04:30:26,100   writing manifest file 'psmpa.egg-info/SOURCES.txt'
2022-03-21T04:30:26,220   Getting requirements to build wheel: finished with status 'done'
2022-03-21T04:30:26,241   Created temporary directory: /tmp/pip-modern-metadata-b07p9oy7
2022-03-21T04:30:26,247   Preparing metadata (pyproject.toml): started
2022-03-21T04:30:26,249   Running command Preparing metadata (pyproject.toml)
2022-03-21T04:30:27,858   running dist_info
2022-03-21T04:30:27,887   creating /tmp/pip-modern-metadata-b07p9oy7/psmpa.egg-info
2022-03-21T04:30:27,898   writing manifest file '/tmp/pip-modern-metadata-b07p9oy7/psmpa.egg-info/SOURCES.txt'
2022-03-21T04:30:27,948   writing manifest file '/tmp/pip-modern-metadata-b07p9oy7/psmpa.egg-info/SOURCES.txt'
2022-03-21T04:30:28,199   Preparing metadata (pyproject.toml): finished with status 'done'
2022-03-21T04:30:28,213   Source in /tmp/pip-wheel-be49rx0b/psmpa_f1480aab7aa74896bb3368a6166871be has version 1.1.1, which satisfies requirement psmpa==1.1.1 from https://files.pythonhosted.org/packages/af/2b/bcbafa77c9a21797b881999903e75a948897cdcbbf3ff8c70ea3406c36f1/psmpa-1.1.1.tar.gz#sha256=01efa3057ddcf5d7cb31e2a18ff215f92db9966d78f0e52d97bdc13c7cc7d128
2022-03-21T04:30:28,215   Removed psmpa==1.1.1 from https://files.pythonhosted.org/packages/af/2b/bcbafa77c9a21797b881999903e75a948897cdcbbf3ff8c70ea3406c36f1/psmpa-1.1.1.tar.gz#sha256=01efa3057ddcf5d7cb31e2a18ff215f92db9966d78f0e52d97bdc13c7cc7d128 from build tracker '/tmp/pip-req-tracker-bvdzrm5f'
2022-03-21T04:30:28,227 Created temporary directory: /tmp/pip-unpack-d5s9v4m8
2022-03-21T04:30:28,228 Building wheels for collected packages: psmpa
2022-03-21T04:30:28,239   Created temporary directory: /tmp/pip-wheel-80awpiiu
2022-03-21T04:30:28,239   Destination directory: /tmp/pip-wheel-80awpiiu
2022-03-21T04:30:28,245   Building wheel for psmpa (pyproject.toml): started
2022-03-21T04:30:28,246   Running command Building wheel for psmpa (pyproject.toml)
2022-03-21T04:30:29,941   running bdist_wheel
2022-03-21T04:30:30,346   running build
2022-03-21T04:30:30,346   running build_py
2022-03-21T04:30:30,354   creating build
2022-03-21T04:30:30,355   creating build/lib
2022-03-21T04:30:30,356   creating build/lib/psmpa
2022-03-21T04:30:30,358   copying psmpa/psmpa2.py -> build/lib/psmpa
2022-03-21T04:30:30,362   copying psmpa/psmpa1.py -> build/lib/psmpa
2022-03-21T04:30:30,366   copying psmpa/default.py -> build/lib/psmpa
2022-03-21T04:30:30,369   copying psmpa/util.py -> build/lib/psmpa
2022-03-21T04:30:30,374   copying psmpa/place_seqs.py -> build/lib/psmpa
2022-03-21T04:30:30,379   copying psmpa/__init__.py -> build/lib/psmpa
2022-03-21T04:30:30,382   copying psmpa/wrap_hsp.py -> build/lib/psmpa
2022-03-21T04:30:30,385   running egg_info
2022-03-21T04:30:30,448   writing manifest file 'psmpa.egg-info/SOURCES.txt'
2022-03-21T04:30:30,461   creating build/lib/psmpa/Rscripts
2022-03-21T04:30:30,463   copying psmpa/Rscripts/castor_hsp.R -> build/lib/psmpa/Rscripts
2022-03-21T04:30:30,468   copying psmpa/Rscripts/castor_nsti.R -> build/lib/psmpa/Rscripts
2022-03-21T04:30:30,472   creating build/lib/psmpa/default_files
2022-03-21T04:30:30,473   creating build/lib/psmpa/default_files/psmpa1
2022-03-21T04:30:30,475   copying psmpa/default_files/psmpa1/16S.tsv.gz -> build/lib/psmpa/default_files/psmpa1
2022-03-21T04:30:30,482   copying psmpa/default_files/psmpa1/bgc.tsv.gz -> build/lib/psmpa/default_files/psmpa1
2022-03-21T04:30:30,512   creating build/lib/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:30,513   copying psmpa/default_files/psmpa1/pro_ref/pro_ref.fna -> build/lib/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:31,790   copying psmpa/default_files/psmpa1/pro_ref/pro_ref.hmm -> build/lib/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:31,810   copying psmpa/default_files/psmpa1/pro_ref/pro_ref.model -> build/lib/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:31,814   copying psmpa/default_files/psmpa1/pro_ref/pro_ref.raxml_info -> build/lib/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:31,818   copying psmpa/default_files/psmpa1/pro_ref/pro_ref.tre -> build/lib/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:31,856   creating build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:31,857   copying psmpa/default_files/psmpa2/psmpa2_database_16S_count.tsv.gz -> build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:31,872   copying psmpa/default_files/psmpa2/psmpa2_database_lineage.tsv.gz -> build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:31,916   copying psmpa/default_files/psmpa2/psmpa2_database_mean_float.tsv.gz -> build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:31,980   copying psmpa/default_files/psmpa2/psmpa2_database_mean_int.tsv.gz -> build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:32,047   copying psmpa/default_files/psmpa2/psmpa2_database_median_float.tsv.gz -> build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:32,109   copying psmpa/default_files/psmpa2/psmpa2_database_median_int.tsv.gz -> build/lib/psmpa/default_files/psmpa2
2022-03-21T04:30:32,169   creating build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:32,171   copying psmpa/default_files/psmpa2/blast_db/rna.ndb -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:32,176   copying psmpa/default_files/psmpa2/blast_db/rna.nhr -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:32,398   copying psmpa/default_files/psmpa2/blast_db/rna.nin -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:32,450   copying psmpa/default_files/psmpa2/blast_db/rna.not -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:32,501   copying psmpa/default_files/psmpa2/blast_db/rna.nsq -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:33,430   copying psmpa/default_files/psmpa2/blast_db/rna.ntf -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:33,435   copying psmpa/default_files/psmpa2/blast_db/rna.nto -> build/lib/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:33,455   running build_scripts
2022-03-21T04:30:33,456   creating build/scripts-3.9
2022-03-21T04:30:33,475   running install
2022-03-21T04:30:33,536   running install_lib
2022-03-21T04:30:33,543   creating build/bdist.linux-armv7l
2022-03-21T04:30:33,544   creating build/bdist.linux-armv7l/wheel
2022-03-21T04:30:33,547   creating build/bdist.linux-armv7l/wheel/psmpa
2022-03-21T04:30:33,558   creating build/bdist.linux-armv7l/wheel/psmpa/Rscripts
2022-03-21T04:30:33,571   creating build/bdist.linux-armv7l/wheel/psmpa/default_files
2022-03-21T04:30:33,574   creating build/bdist.linux-armv7l/wheel/psmpa/default_files/psmpa1
2022-03-21T04:30:33,612   creating build/bdist.linux-armv7l/wheel/psmpa/default_files/psmpa1/pro_ref
2022-03-21T04:30:34,812   creating build/bdist.linux-armv7l/wheel/psmpa/default_files/psmpa2
2022-03-21T04:30:34,876   creating build/bdist.linux-armv7l/wheel/psmpa/default_files/psmpa2/blast_db
2022-03-21T04:30:36,465   running install_egg_info
2022-03-21T04:30:36,484   Copying psmpa.egg-info to build/bdist.linux-armv7l/wheel/psmpa-1.1.1-py3.9.egg-info
2022-03-21T04:30:36,501   running install_scripts
2022-03-21T04:30:36,634   creating build/bdist.linux-armv7l/wheel/psmpa-1.1.1.data
2022-03-21T04:30:36,635   creating build/bdist.linux-armv7l/wheel/psmpa-1.1.1.data/scripts
2022-03-21T04:31:04,231   Building wheel for psmpa (pyproject.toml): finished with status 'done'
2022-03-21T04:31:05,398   Created wheel for psmpa: filename=psmpa-1.1.1-py3-none-any.whl size=19683260 sha256=3ef25788770906671c58098b8012c286b696765163abb65a802fd06dfe831031
2022-03-21T04:31:05,400   Stored in directory: /tmp/pip-ephem-wheel-cache-ehxnug7n/wheels/c4/ce/d3/33a472f7488ec13cfa09c547d8eeb8c1576fd6e263f65661b0
2022-03-21T04:31:05,448 Successfully built psmpa
2022-03-21T04:31:06,875 Removed build tracker: '/tmp/pip-req-tracker-bvdzrm5f'