2022-03-31T14:03:06,656 Created temporary directory: /tmp/pip-ephem-wheel-cache-cla8h4y_ 2022-03-31T14:03:06,661 Created temporary directory: /tmp/pip-req-tracker-jumnzob6 2022-03-31T14:03:06,662 Initialized build tracking at /tmp/pip-req-tracker-jumnzob6 2022-03-31T14:03:06,663 Created build tracker: /tmp/pip-req-tracker-jumnzob6 2022-03-31T14:03:06,663 Entered build tracker: /tmp/pip-req-tracker-jumnzob6 2022-03-31T14:03:06,664 Created temporary directory: /tmp/pip-wheel-do7qgcdf 2022-03-31T14:03:06,733 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-03-31T14:03:06,742 2 location(s) to search for versions of evidence-normalizer: 2022-03-31T14:03:06,742 * https://pypi.org/simple/evidence-normalizer/ 2022-03-31T14:03:06,742 * https://www.piwheels.org/simple/evidence-normalizer/ 2022-03-31T14:03:06,743 Fetching project page and analyzing links: https://pypi.org/simple/evidence-normalizer/ 2022-03-31T14:03:06,744 Getting page https://pypi.org/simple/evidence-normalizer/ 2022-03-31T14:03:06,748 Found index url https://pypi.org/simple 2022-03-31T14:03:06,864 Found link https://files.pythonhosted.org/packages/f0/12/39d58cc93d94993e46142f00039c1cf3874a0bb920210c263fa6e8e34aa4/evidence-normalizer-0.0.1.tar.gz#sha256=448b630c670c4fcaed303f94fa9f640c7d541482dc9d360f46e23e2ec163d11b (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7), version: 0.0.1 2022-03-31T14:03:06,865 Skipping link: No binaries permitted for evidence-normalizer: https://files.pythonhosted.org/packages/de/45/63bbaf1fad48d858bbe6b50d95adb28d26d189745378cad0d6cf0213b37a/evidence_normalizer-0.0.1-py3-none-any.whl#sha256=6d7c6de31f0b3eaae87be9f129d495ed14b26f96715ce2f348da45558e9bf298 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:06,867 Found link https://files.pythonhosted.org/packages/2e/7e/66e7c5bed0a1a15e4ec1f38cba47e1e1b579928451fc7fe4b4a9d2f55ded/evidence-normalizer-0.0.2.tar.gz#sha256=af932bef42fd05de1ff7f67976527e7d654c670442724a020b407a616bd018a9 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7), version: 0.0.2 2022-03-31T14:03:06,867 Skipping link: No binaries permitted for evidence-normalizer: https://files.pythonhosted.org/packages/c6/a6/7f25f20e275e3fa6400d696e8f6fbbe4aecbd92b93c26ed9b7063b66432c/evidence_normalizer-0.0.2-py3-none-any.whl#sha256=9b4530f80effbeb21e93dfba4218c5524042670e4ade1a8a98adc541f9b2f129 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:06,869 Found link https://files.pythonhosted.org/packages/11/59/be2b783b22e082b3333b0678a1bc3266100b5ec73347f821e82a22c9c4f5/evidence-normalizer-0.0.3a1.tar.gz#sha256=c43a3b01d1c63859046cbe546c7dcf9b1582ea74ea638a567bd2013627a5c1f6 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7), version: 0.0.3a1 2022-03-31T14:03:06,870 Skipping link: No binaries permitted for evidence-normalizer: https://files.pythonhosted.org/packages/c9/69/b9b9d6e584e2809742665b1a60d4ec2565f15033076638757e05b889377b/evidence_normalizer-0.0.3a1-py3-none-any.whl#sha256=4672294f204b3b9706380de23067741fd430d723b13ef5196b9c44fdd4cfbea8 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:06,871 Found link https://files.pythonhosted.org/packages/6b/3d/ee120821d5b0c6915b30878264275e3a76e4cc71884119c8fa87bf331b3c/evidence-normalizer-0.0.3a2.tar.gz#sha256=c5018103f67b5ae265965caf1706e60c1bdc426579a8d1a5679fd178ae5d0533 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7), version: 0.0.3a2 2022-03-31T14:03:06,872 Skipping link: No binaries permitted for evidence-normalizer: https://files.pythonhosted.org/packages/74/4f/c15de7660d529af0b1fbced01d79d98e718c1a17b5acee03927e435c5fc7/evidence_normalizer-0.0.3a2-py3-none-any.whl#sha256=2e750cc9db0136179e21adba02c543231f8f594b3ed6fe49c5b9bc618c101303 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:06,873 Found link https://files.pythonhosted.org/packages/91/dc/25f2cc6aec2a9f3e8d45dba45d94697cdec28fb75b7c72bade8b60262470/evidence-normalizer-0.0.3a3.tar.gz#sha256=dcc77912413a92e4436bd9d9166556149e2bb0308966bfc56f2abbb5f2ec3fb4 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7), version: 0.0.3a3 2022-03-31T14:03:06,874 Skipping link: No binaries permitted for evidence-normalizer: https://files.pythonhosted.org/packages/19/8b/62ab05d980f4169c2ed477061d460710fb00505a2ff10fad73271989b40f/evidence_normalizer-0.0.3a3-py3-none-any.whl#sha256=e4aec4a2edf8fb0c04eaf6935bb1cc546d2946efa62d9e39dbb28113d3ecc955 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:06,875 Found link https://files.pythonhosted.org/packages/07/a7/e98946e0210c3b11d6f32164515e60ad497ed2acd556be5918c1a7d73c8b/evidence-normalizer-0.0.3a4.tar.gz#sha256=1066e1901921d0c9f7820a7066a9a7a3349d12dd8a58c42134dba561f3229e57 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7), version: 0.0.3a4 2022-03-31T14:03:06,876 Skipping link: No binaries permitted for evidence-normalizer: https://files.pythonhosted.org/packages/1f/7d/2dac600493b0d4d2d0305cf5641fc128a58b6e1b60fe34280c3753f20613/evidence_normalizer-0.0.3a4-py3-none-any.whl#sha256=b259debb1fe9bdf462e64abe1ff8d149a3f9de53e0e1118fe26264dc3a5eead4 (from https://pypi.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:06,876 Fetching project page and analyzing links: https://www.piwheels.org/simple/evidence-normalizer/ 2022-03-31T14:03:06,877 Getting page https://www.piwheels.org/simple/evidence-normalizer/ 2022-03-31T14:03:06,879 Found index url https://www.piwheels.org/simple 2022-03-31T14:03:07,086 Skipping link: No binaries permitted for evidence-normalizer: https://www.piwheels.org/simple/evidence-normalizer/evidence_normalizer-0.0.3a3-py3-none-any.whl#sha256=5d6b169877f1f2f6603e855b765ed7e0e047ece9f89b9a2733a6e7445cfa8278 (from https://www.piwheels.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:07,086 Skipping link: No binaries permitted for evidence-normalizer: https://www.piwheels.org/simple/evidence-normalizer/evidence_normalizer-0.0.3a2-py3-none-any.whl#sha256=d183d519db89bd9cd552684429dcd152bb5691cfd2e00f02f05f90f105701ecc (from https://www.piwheels.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:07,087 Skipping link: No binaries permitted for evidence-normalizer: https://www.piwheels.org/simple/evidence-normalizer/evidence_normalizer-0.0.3a1-py3-none-any.whl#sha256=3231327b76cdd30084678ebc6725b3965998b129e9492449539b9c6ac97faf82 (from https://www.piwheels.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:07,087 Skipping link: No binaries permitted for evidence-normalizer: https://www.piwheels.org/simple/evidence-normalizer/evidence_normalizer-0.0.2-py3-none-any.whl#sha256=07a376d7d6dc27f20934b678a51963320413ad633c9a17ecc0fbfd60511fbbc8 (from https://www.piwheels.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:07,088 Skipping link: No binaries permitted for evidence-normalizer: https://www.piwheels.org/simple/evidence-normalizer/evidence_normalizer-0.0.1-py3-none-any.whl#sha256=4d951201390e794a21b58b548819c31684b46a398113d34f1e8b6b9b339e22a4 (from https://www.piwheels.org/simple/evidence-normalizer/) (requires-python:>=3.7) 2022-03-31T14:03:07,088 Skipping link: not a file: https://www.piwheels.org/simple/evidence-normalizer/ 2022-03-31T14:03:07,089 Skipping link: not a file: https://pypi.org/simple/evidence-normalizer/ 2022-03-31T14:03:07,124 Given no hashes to check 1 links for project 'evidence-normalizer': discarding no candidates 2022-03-31T14:03:07,156 Collecting evidence-normalizer==0.0.3a4 2022-03-31T14:03:07,160 Created temporary directory: /tmp/pip-unpack-26d4xkic 2022-03-31T14:03:07,395 Downloading evidence-normalizer-0.0.3a4.tar.gz (15 kB) 2022-03-31T14:03:07,527 Added evidence-normalizer==0.0.3a4 from https://files.pythonhosted.org/packages/07/a7/e98946e0210c3b11d6f32164515e60ad497ed2acd556be5918c1a7d73c8b/evidence-normalizer-0.0.3a4.tar.gz#sha256=1066e1901921d0c9f7820a7066a9a7a3349d12dd8a58c42134dba561f3229e57 to build tracker '/tmp/pip-req-tracker-jumnzob6' 2022-03-31T14:03:07,529 Running setup.py (path:/tmp/pip-wheel-do7qgcdf/evidence-normalizer_c4eada964dca48e09e838572b14221a3/setup.py) egg_info for package evidence-normalizer 2022-03-31T14:03:07,530 Created temporary directory: /tmp/pip-pip-egg-info-amdkcmin 2022-03-31T14:03:07,531 Preparing metadata (setup.py): started 2022-03-31T14:03:07,533 Running command python setup.py egg_info 2022-03-31T14:03:09,566 running egg_info 2022-03-31T14:03:09,573 creating /tmp/pip-pip-egg-info-amdkcmin/evidence_normalizer.egg-info 2022-03-31T14:03:09,588 writing manifest file '/tmp/pip-pip-egg-info-amdkcmin/evidence_normalizer.egg-info/SOURCES.txt' 2022-03-31T14:03:09,620 writing manifest file '/tmp/pip-pip-egg-info-amdkcmin/evidence_normalizer.egg-info/SOURCES.txt' 2022-03-31T14:03:09,622 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:726: UserWarning: Usage of dash-separated 'home-page' will not be supported in future versions. Please use the underscore name 'home_page' instead 2022-03-31T14:03:09,623 % (opt, underscore_opt) 2022-03-31T14:03:09,623 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:726: UserWarning: Usage of dash-separated 'license-file' will not be supported in future versions. Please use the underscore name 'license_file' instead 2022-03-31T14:03:09,623 % (opt, underscore_opt) 2022-03-31T14:03:09,750 Preparing metadata (setup.py): finished with status 'done' 2022-03-31T14:03:09,761 Source in /tmp/pip-wheel-do7qgcdf/evidence-normalizer_c4eada964dca48e09e838572b14221a3 has version 0.0.3a4, which satisfies requirement evidence-normalizer==0.0.3a4 from https://files.pythonhosted.org/packages/07/a7/e98946e0210c3b11d6f32164515e60ad497ed2acd556be5918c1a7d73c8b/evidence-normalizer-0.0.3a4.tar.gz#sha256=1066e1901921d0c9f7820a7066a9a7a3349d12dd8a58c42134dba561f3229e57 2022-03-31T14:03:09,763 Removed evidence-normalizer==0.0.3a4 from https://files.pythonhosted.org/packages/07/a7/e98946e0210c3b11d6f32164515e60ad497ed2acd556be5918c1a7d73c8b/evidence-normalizer-0.0.3a4.tar.gz#sha256=1066e1901921d0c9f7820a7066a9a7a3349d12dd8a58c42134dba561f3229e57 from build tracker '/tmp/pip-req-tracker-jumnzob6' 2022-03-31T14:03:09,777 Created temporary directory: /tmp/pip-unpack-xcxjf85k 2022-03-31T14:03:09,778 Building wheels for collected packages: evidence-normalizer 2022-03-31T14:03:09,788 Created temporary directory: /tmp/pip-wheel-iugtoxce 2022-03-31T14:03:09,789 Building wheel for evidence-normalizer (setup.py): started 2022-03-31T14:03:09,791 Destination directory: /tmp/pip-wheel-iugtoxce 2022-03-31T14:03:09,791 Running command python setup.py bdist_wheel 2022-03-31T14:03:11,562 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:726: UserWarning: Usage of dash-separated 'home-page' will not be supported in future versions. Please use the underscore name 'home_page' instead 2022-03-31T14:03:11,564 % (opt, underscore_opt) 2022-03-31T14:03:11,565 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:726: UserWarning: Usage of dash-separated 'license-file' will not be supported in future versions. Please use the underscore name 'license_file' instead 2022-03-31T14:03:11,565 % (opt, underscore_opt) 2022-03-31T14:03:12,054 running bdist_wheel 2022-03-31T14:03:12,063 running build 2022-03-31T14:03:12,064 running build_py 2022-03-31T14:03:12,072 creating build 2022-03-31T14:03:12,073 creating build/lib 2022-03-31T14:03:12,074 creating build/lib/evidence 2022-03-31T14:03:12,076 copying evidence/schemas.py -> build/lib/evidence 2022-03-31T14:03:12,080 copying evidence/main.py -> build/lib/evidence 2022-03-31T14:03:12,084 copying evidence/__init__.py -> build/lib/evidence 2022-03-31T14:03:12,087 copying evidence/version.py -> build/lib/evidence 2022-03-31T14:03:12,091 creating build/lib/evidence/dev 2022-03-31T14:03:12,093 copying evidence/dev/__init__.py -> build/lib/evidence/dev 2022-03-31T14:03:12,096 copying evidence/dev/cli.py -> build/lib/evidence/dev 2022-03-31T14:03:12,105 creating build/lib/evidence/data_sources 2022-03-31T14:03:12,106 copying evidence/data_sources/cbioportal.py -> build/lib/evidence/data_sources 2022-03-31T14:03:12,110 copying evidence/data_sources/__init__.py -> build/lib/evidence/data_sources 2022-03-31T14:03:12,113 copying evidence/data_sources/cancer_hotspots.py -> build/lib/evidence/data_sources 2022-03-31T14:03:12,117 copying evidence/data_sources/base.py -> build/lib/evidence/data_sources 2022-03-31T14:03:12,120 copying evidence/data_sources/gnomad.py -> build/lib/evidence/data_sources 2022-03-31T14:03:12,125 creating build/lib/evidence/dev/etl 2022-03-31T14:03:12,127 copying evidence/dev/etl/cbioportal.py -> build/lib/evidence/dev/etl 2022-03-31T14:03:12,131 copying evidence/dev/etl/__init__.py -> build/lib/evidence/dev/etl 2022-03-31T14:03:12,134 copying evidence/dev/etl/cancer_hotspots.py -> build/lib/evidence/dev/etl 2022-03-31T14:03:12,152 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-03-31T14:03:12,152 setuptools.SetuptoolsDeprecationWarning, 2022-03-31T14:03:12,157 running install 2022-03-31T14:03:12,220 running install_lib 2022-03-31T14:03:12,227 creating build/bdist.linux-armv7l 2022-03-31T14:03:12,227 creating build/bdist.linux-armv7l/wheel 2022-03-31T14:03:12,231 creating build/bdist.linux-armv7l/wheel/evidence 2022-03-31T14:03:12,234 creating build/bdist.linux-armv7l/wheel/evidence/dev 2022-03-31T14:03:12,240 creating build/bdist.linux-armv7l/wheel/evidence/dev/etl 2022-03-31T14:03:12,271 creating build/bdist.linux-armv7l/wheel/evidence/data_sources 2022-03-31T14:03:12,292 running install_egg_info 2022-03-31T14:03:12,335 running egg_info 2022-03-31T14:03:12,367 writing manifest file 'evidence_normalizer.egg-info/SOURCES.txt' 2022-03-31T14:03:12,370 Copying evidence_normalizer.egg-info to build/bdist.linux-armv7l/wheel/evidence_normalizer-0.0.3a4-py3.7.egg-info 2022-03-31T14:03:12,392 running install_scripts 2022-03-31T14:03:12,785 Building wheel for evidence-normalizer (setup.py): finished with status 'done' 2022-03-31T14:03:12,792 Created wheel for evidence-normalizer: filename=evidence_normalizer-0.0.3a4-py3-none-any.whl size=19624 sha256=da80621f61e91072e6d7019506fc4494e2ecdfc44b06e08c1ea1ecc1af47dfcb 2022-03-31T14:03:12,794 Stored in directory: /tmp/pip-ephem-wheel-cache-cla8h4y_/wheels/2d/78/18/b3f84867529f17c8dab624190a29e9df026118a86315a00701 2022-03-31T14:03:12,818 Successfully built evidence-normalizer 2022-03-31T14:03:12,826 Removed build tracker: '/tmp/pip-req-tracker-jumnzob6'