2022-04-01T00:59:56,458 Created temporary directory: /tmp/pip-ephem-wheel-cache-4hna6r9v 2022-04-01T00:59:56,464 Created temporary directory: /tmp/pip-req-tracker-ji8c5f3r 2022-04-01T00:59:56,464 Initialized build tracking at /tmp/pip-req-tracker-ji8c5f3r 2022-04-01T00:59:56,465 Created build tracker: /tmp/pip-req-tracker-ji8c5f3r 2022-04-01T00:59:56,465 Entered build tracker: /tmp/pip-req-tracker-ji8c5f3r 2022-04-01T00:59:56,466 Created temporary directory: /tmp/pip-wheel-pvs5oysz 2022-04-01T00:59:56,535 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-01T00:59:56,544 2 location(s) to search for versions of scikit-bio: 2022-04-01T00:59:56,544 * https://pypi.org/simple/scikit-bio/ 2022-04-01T00:59:56,544 * https://www.piwheels.org/simple/scikit-bio/ 2022-04-01T00:59:56,545 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2022-04-01T00:59:56,546 Getting page https://pypi.org/simple/scikit-bio/ 2022-04-01T00:59:56,550 Found index url https://pypi.org/simple 2022-04-01T00:59:56,678 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz#sha256=e68193db29015e8f861b7d548f432384aa1741575028ce9a138b39ebee66e1ed (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2022-04-01T00:59:56,679 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz#sha256=f758a5136a211cba16c8e6f1ed250f0fadb27fab436c5b7a73902dbb114618df (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2022-04-01T00:59:56,680 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz#sha256=bdd9cb68dcc5e3ffc00fa5ae21e9e0f92f1f9c2e5a24a671596bb39d0d3e02a7 (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2022-04-01T00:59:56,681 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz#sha256=11af62a5d8302da204c004b16bc625cc055e7322633b289353929ccc4b872e74 (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2022-04-01T00:59:56,681 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2022-04-01T00:59:56,682 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz#sha256=f136639c66f48d1e83b9799e044c49f0febefa4ead4b4fb7c88ec503147bdb03 (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2022-04-01T00:59:56,683 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz#sha256=348687b973be55505ec7e90c40a21921533d3b5021599705922b8c730cb8c872 (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2022-04-01T00:59:56,683 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz#sha256=adc7a3aa93ca7a3f642531e2cf64778ae243087fd6279d5354fdf157943f41cb (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2022-04-01T00:59:56,684 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz#sha256=6c5fb4b6baec0abde209d33e86e95ff4a776f653a6c3916aa95831eafe03472a (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2022-04-01T00:59:56,685 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz#sha256=5feec63b49249360d2bb55d0163d7066f530d163b5474a3319ec197e7e74c683 (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2022-04-01T00:59:56,685 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz#sha256=90a3f1ffd9401d8a8f8c1ba8fdd1ea63577fb2063209440d27e8e0834322a1e3 (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2022-04-01T00:59:56,686 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz#sha256=66e755b6c7d5b861c7eb63aeb46f4d9afe74ee0ac93c1215e0aa57003e573b0b (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2022-04-01T00:59:56,687 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz#sha256=fe33a6cd7e6eb3fd8c088491422e499cfb36fab63c38659b587230f3dd63d91a (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2022-04-01T00:59:56,688 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip#sha256=482194dd827b86fdf340d1576b07d70f8c62158d471d733fa3e73fe316afaa3a (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2022-04-01T00:59:56,688 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2022-04-01T00:59:56,689 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz#sha256=566c83249d2d338104d106c3a8ba36fa1afeabf10ead8e95b84605b71c65b743 (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2022-04-01T00:59:56,690 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2022-04-01T00:59:56,690 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz#sha256=3243f1995ef24643c09ff4d9391a79528aadd8232e5aa5d66c38d7b2e0c92f24 (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2022-04-01T00:59:56,691 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz#sha256=9fa813be66e88a994f7b7a68b8ba2216e205c525caa8585386ebdeebed6428df (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2022-04-01T00:59:56,692 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2022-04-01T00:59:56,692 Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz#sha256=6343ca0c621e2fcc5d1c042c8be3200664c5325956a83bea751cf1bcc75d1da9 (from https://pypi.org/simple/scikit-bio/), version: 0.5.7 2022-04-01T00:59:56,693 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/ 2022-04-01T00:59:56,694 Getting page https://www.piwheels.org/simple/scikit-bio/ 2022-04-01T00:59:56,696 Found index url https://www.piwheels.org/simple 2022-04-01T00:59:56,900 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2022-04-01T00:59:56,901 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2022-04-01T00:59:56,901 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2022-04-01T00:59:56,902 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2022-04-01T00:59:56,903 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/ 2022-04-01T00:59:56,903 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2022-04-01T00:59:56,954 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2022-04-01T00:59:56,995 Collecting scikit-bio==0.5.7 2022-04-01T00:59:57,000 Created temporary directory: /tmp/pip-unpack-p_mvrk3q 2022-04-01T00:59:57,094 Downloading scikit-bio-0.5.7.tar.gz (8.7 MB) 2022-04-01T01:00:03,310 Added scikit-bio==0.5.7 from https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz#sha256=6343ca0c621e2fcc5d1c042c8be3200664c5325956a83bea751cf1bcc75d1da9 to build tracker '/tmp/pip-req-tracker-ji8c5f3r' 2022-04-01T01:00:03,322 Created temporary directory: /tmp/pip-build-env-rwclgomw 2022-04-01T01:00:03,346 Created temporary directory: /tmp/pip-standalone-pip-msorjmo8 2022-04-01T01:00:05,643 Installing build dependencies: started 2022-04-01T01:00:05,645 Running command pip subprocess to install build dependencies 2022-04-01T01:00:17,446 Using pip 22.0.4 from /tmp/pip-standalone-pip-msorjmo8/__env_pip__.zip/pip (python 3.9) 2022-04-01T01:00:18,981 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-01T01:00:22,695 Collecting Cython 2022-04-01T01:00:23,689 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.28-cp39-cp39-linux_armv7l.whl (5.0 MB) 2022-04-01T01:00:27,623 Collecting numpy>=1.9.2 2022-04-01T01:00:30,221 Using cached https://www.piwheels.org/simple/numpy/numpy-1.22.3-cp39-cp39-linux_armv7l.whl (12.9 MB) 2022-04-01T01:00:35,026 Collecting setuptools 2022-04-01T01:00:35,276 Using cached https://www.piwheels.org/simple/setuptools/setuptools-61.3.0-py3-none-any.whl (1.1 MB) 2022-04-01T01:00:35,915 Collecting wheel 2022-04-01T01:00:35,949 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-04-01T01:00:40,083 Installing collected packages: wheel, setuptools, numpy, Cython 2022-04-01T01:00:40,382 Creating /tmp/pip-build-env-rwclgomw/overlay/bin 2022-04-01T01:00:40,386 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/wheel to 755 2022-04-01T01:01:03,493 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/f2py to 755 2022-04-01T01:01:03,497 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/f2py3 to 755 2022-04-01T01:01:03,502 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/f2py3.9 to 755 2022-04-01T01:01:09,681 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/cygdb to 755 2022-04-01T01:01:09,686 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/cython to 755 2022-04-01T01:01:09,690 changing mode of /tmp/pip-build-env-rwclgomw/overlay/bin/cythonize to 755 2022-04-01T01:01:09,742 Successfully installed Cython-0.29.28 numpy-1.22.3 setuptools-61.3.0 wheel-0.37.1 2022-04-01T01:01:10,554 Installing build dependencies: finished with status 'done' 2022-04-01T01:01:10,601 Getting requirements to build wheel: started 2022-04-01T01:01:10,603 Running command Getting requirements to build wheel 2022-04-01T01:01:15,400 running egg_info 2022-04-01T01:01:15,815 no previously-included directories found matching 'doc/build' 2022-04-01T01:01:15,819 no previously-included directories found matching 'doc/source/generated' 2022-04-01T01:01:15,830 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-04-01T01:01:15,841 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2022-04-01T01:01:15,853 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-04-01T01:01:15,862 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2022-04-01T01:01:15,871 warning: no previously-included files matching '.coverage' found anywhere in distribution 2022-04-01T01:01:15,988 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2022-04-01T01:01:16,257 Getting requirements to build wheel: finished with status 'done' 2022-04-01T01:01:16,279 Created temporary directory: /tmp/pip-modern-metadata-n18djimj 2022-04-01T01:01:16,284 Preparing metadata (pyproject.toml): started 2022-04-01T01:01:16,286 Running command Preparing metadata (pyproject.toml) 2022-04-01T01:01:20,607 running dist_info 2022-04-01T01:01:20,636 creating /tmp/pip-modern-metadata-n18djimj/scikit_bio.egg-info 2022-04-01T01:01:20,650 writing manifest file '/tmp/pip-modern-metadata-n18djimj/scikit_bio.egg-info/SOURCES.txt' 2022-04-01T01:01:21,056 no previously-included directories found matching 'doc/build' 2022-04-01T01:01:21,059 no previously-included directories found matching 'doc/source/generated' 2022-04-01T01:01:21,067 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-04-01T01:01:21,075 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2022-04-01T01:01:21,083 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-04-01T01:01:21,089 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2022-04-01T01:01:21,096 warning: no previously-included files matching '.coverage' found anywhere in distribution 2022-04-01T01:01:21,187 writing manifest file '/tmp/pip-modern-metadata-n18djimj/scikit_bio.egg-info/SOURCES.txt' 2022-04-01T01:01:21,622 Preparing metadata (pyproject.toml): finished with status 'done' 2022-04-01T01:01:21,637 Source in /tmp/pip-wheel-pvs5oysz/scikit-bio_6d8f9cb5b19d441ca2da47eb7dd478f1 has version 0.5.7, which satisfies requirement scikit-bio==0.5.7 from https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz#sha256=6343ca0c621e2fcc5d1c042c8be3200664c5325956a83bea751cf1bcc75d1da9 2022-04-01T01:01:21,639 Removed scikit-bio==0.5.7 from https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz#sha256=6343ca0c621e2fcc5d1c042c8be3200664c5325956a83bea751cf1bcc75d1da9 from build tracker '/tmp/pip-req-tracker-ji8c5f3r' 2022-04-01T01:01:21,649 Created temporary directory: /tmp/pip-unpack-q9tqnksw 2022-04-01T01:01:21,651 Building wheels for collected packages: scikit-bio 2022-04-01T01:01:21,659 Created temporary directory: /tmp/pip-wheel-tgjqt5il 2022-04-01T01:01:21,660 Destination directory: /tmp/pip-wheel-tgjqt5il 2022-04-01T01:01:21,666 Building wheel for scikit-bio (pyproject.toml): started 2022-04-01T01:01:21,668 Running command Building wheel for scikit-bio (pyproject.toml) 2022-04-01T01:01:26,056 running bdist_wheel 2022-04-01T01:01:26,064 running build 2022-04-01T01:01:26,064 running build_py 2022-04-01T01:01:26,072 creating build 2022-04-01T01:01:26,072 creating build/lib.linux-armv7l-3.9 2022-04-01T01:01:26,074 creating build/lib.linux-armv7l-3.9/skbio 2022-04-01T01:01:26,076 copying skbio/test.py -> build/lib.linux-armv7l-3.9/skbio 2022-04-01T01:01:26,079 copying skbio/workflow.py -> build/lib.linux-armv7l-3.9/skbio 2022-04-01T01:01:26,084 copying skbio/__init__.py -> build/lib.linux-armv7l-3.9/skbio 2022-04-01T01:01:26,087 copying skbio/_base.py -> build/lib.linux-armv7l-3.9/skbio 2022-04-01T01:01:26,091 creating build/lib.linux-armv7l-3.9/benchmarks 2022-04-01T01:01:26,113 copying benchmarks/benchmarks.py -> build/lib.linux-armv7l-3.9/benchmarks 2022-04-01T01:01:26,116 copying benchmarks/__init__.py -> build/lib.linux-armv7l-3.9/benchmarks 2022-04-01T01:01:26,120 creating build/lib.linux-armv7l-3.9/skbio/tree 2022-04-01T01:01:26,121 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-3.9/skbio/tree 2022-04-01T01:01:26,125 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree 2022-04-01T01:01:26,129 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree 2022-04-01T01:01:26,133 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree 2022-04-01T01:01:26,137 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree 2022-04-01T01:01:26,147 creating build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,148 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,153 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,158 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,163 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,166 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,174 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,178 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,182 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,186 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,190 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2022-04-01T01:01:26,195 creating build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,197 copying skbio/util/_exception.py -> build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,200 copying skbio/util/_warning.py -> build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,203 copying skbio/util/_misc.py -> build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,207 copying skbio/util/_testing.py -> build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,211 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,215 copying skbio/util/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util 2022-04-01T01:01:26,219 creating build/lib.linux-armv7l-3.9/skbio/tests 2022-04-01T01:01:26,221 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/tests 2022-04-01T01:01:26,224 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-3.9/skbio/tests 2022-04-01T01:01:26,228 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tests 2022-04-01T01:01:26,233 creating build/lib.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:26,234 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:26,239 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:26,245 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:26,250 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:26,253 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:26,260 creating build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,261 copying skbio/io/_exception.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,264 copying skbio/io/_warning.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,267 copying skbio/io/registry.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,274 copying skbio/io/util.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,277 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,281 copying skbio/io/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,285 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-3.9/skbio/io 2022-04-01T01:01:26,289 creating build/lib.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:26,291 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:26,297 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:26,306 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:26,309 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:26,312 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:26,317 creating build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,319 copying skbio/stats/power.py -> build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,325 copying skbio/stats/composition.py -> build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,330 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,333 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,339 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,343 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:26,347 creating build/lib.linux-armv7l-3.9/skbio/diversity 2022-04-01T01:01:26,349 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2022-04-01T01:01:26,353 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2022-04-01T01:01:26,357 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2022-04-01T01:01:26,362 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2022-04-01T01:01:26,367 creating build/lib.linux-armv7l-3.9/skbio/tree/tests 2022-04-01T01:01:26,368 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2022-04-01T01:01:26,372 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2022-04-01T01:01:26,380 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2022-04-01T01:01:26,382 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2022-04-01T01:01:26,388 creating build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,390 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,393 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,402 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,406 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,410 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,415 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,417 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,423 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,426 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2022-04-01T01:01:26,431 creating build/lib.linux-armv7l-3.9/skbio/util/tests 2022-04-01T01:01:26,432 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2022-04-01T01:01:26,436 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2022-04-01T01:01:26,440 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2022-04-01T01:01:26,443 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2022-04-01T01:01:26,449 creating build/lib.linux-armv7l-3.9/skbio/metadata/tests 2022-04-01T01:01:26,450 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2022-04-01T01:01:26,456 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2022-04-01T01:01:26,460 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2022-04-01T01:01:26,463 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2022-04-01T01:01:26,468 creating build/lib.linux-armv7l-3.9/skbio/io/tests 2022-04-01T01:01:26,469 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2022-04-01T01:01:26,472 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2022-04-01T01:01:26,477 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2022-04-01T01:01:26,485 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2022-04-01T01:01:26,491 creating build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,492 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,498 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,502 copying skbio/io/format/binary_dm.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,507 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,512 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,516 copying skbio/io/format/embl.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,522 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,525 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,530 copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,534 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,538 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,542 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,545 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,549 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,553 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,557 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,562 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,566 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,569 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,573 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2022-04-01T01:01:26,581 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,582 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,586 copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,591 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,598 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,603 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,608 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,612 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,616 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,621 copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,625 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,629 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,634 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,638 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,642 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,646 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,649 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,653 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,657 copying skbio/io/format/tests/test_binary_dm.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,661 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2022-04-01T01:01:26,666 creating build/lib.linux-armv7l-3.9/skbio/alignment/tests 2022-04-01T01:01:26,668 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2022-04-01T01:01:26,673 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2022-04-01T01:01:26,678 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2022-04-01T01:01:26,681 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2022-04-01T01:01:26,693 creating build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2022-04-01T01:01:26,694 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2022-04-01T01:01:26,700 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,701 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,706 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,711 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,715 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,718 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,722 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,726 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:01:26,732 creating build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,733 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,740 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,743 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,750 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,753 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,756 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2022-04-01T01:01:26,762 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve 2022-04-01T01:01:26,763 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2022-04-01T01:01:26,767 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2022-04-01T01:01:26,772 creating build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,773 copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,778 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,782 copying skbio/stats/distance/_utils.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,792 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,797 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,801 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,805 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,809 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:01:26,817 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,818 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,823 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,827 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,831 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,835 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,839 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,841 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2022-04-01T01:01:26,847 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2022-04-01T01:01:26,848 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2022-04-01T01:01:26,852 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2022-04-01T01:01:26,857 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,858 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,863 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,868 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,875 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,878 copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,882 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,886 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2022-04-01T01:01:26,891 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,892 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,896 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,900 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,903 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,908 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,912 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,915 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2022-04-01T01:01:26,921 creating build/lib.linux-armv7l-3.9/skbio/diversity/tests 2022-04-01T01:01:26,923 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2022-04-01T01:01:26,927 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2022-04-01T01:01:26,932 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2022-04-01T01:01:26,938 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2022-04-01T01:01:26,942 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta 2022-04-01T01:01:26,943 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2022-04-01T01:01:26,949 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2022-04-01T01:01:26,953 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,955 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,959 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,963 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,967 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,970 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,973 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,976 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2022-04-01T01:01:26,981 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2022-04-01T01:01:26,982 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2022-04-01T01:01:26,988 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2022-04-01T01:01:27,219 creating build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,220 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,225 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,229 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,233 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,237 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,241 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,245 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,249 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2022-04-01T01:01:27,253 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,255 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,259 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,263 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,267 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,271 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,275 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,280 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,284 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,288 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,292 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,296 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,300 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,303 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,307 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,311 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,315 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,318 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,322 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,326 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,330 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,334 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,337 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,342 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,346 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,349 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,353 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,357 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,361 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,365 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,369 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,373 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,376 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,381 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,384 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,388 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,392 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,396 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,399 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,422 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,426 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,430 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,434 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,438 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,442 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,446 copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,450 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,454 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,457 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,461 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,465 copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,470 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,473 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,477 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,481 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,484 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,488 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,492 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,496 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,499 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,503 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,507 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,510 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,514 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,518 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,522 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,526 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,530 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,534 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,538 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,542 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,546 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,550 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,553 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,557 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,561 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,565 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,568 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,572 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,576 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,580 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,584 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,588 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,592 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,595 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,599 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,603 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,607 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,611 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,615 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,618 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,622 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,626 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,630 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,633 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,637 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,641 copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,645 copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,649 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,653 copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,657 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,661 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,665 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,675 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,679 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,683 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,687 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,691 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,695 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,699 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,703 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,707 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,711 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,715 copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,718 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,722 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,726 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,730 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,733 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,737 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,740 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,744 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,748 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,752 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,755 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,759 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,763 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,767 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,771 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,775 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,778 copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,783 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,787 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,791 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,794 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,798 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,802 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,806 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,810 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,814 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,819 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,824 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,827 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,832 copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,835 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,839 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,843 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,846 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,850 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,854 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,858 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,862 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,867 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,870 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,874 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,878 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,882 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,885 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,890 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,893 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,897 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,901 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,905 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,910 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,914 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,918 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,921 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,925 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,929 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,933 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,936 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,941 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,948 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,952 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,956 copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,960 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,964 copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,967 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,971 copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,975 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,978 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,982 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,985 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,989 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,993 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:27,996 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,000 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,004 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,007 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,032 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,035 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,039 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,043 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,046 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,050 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,054 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,057 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,061 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,064 copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,068 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,071 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,075 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,078 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,082 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,086 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,089 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,093 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,096 copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,100 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,104 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,108 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,112 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,116 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,119 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,123 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,126 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,130 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,134 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,138 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,141 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,145 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,148 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,153 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,157 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,161 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,164 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,168 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,172 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,175 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,179 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,183 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,186 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,190 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,194 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,197 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,201 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,205 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,209 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,213 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,216 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,220 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,224 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,227 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,231 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,235 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,238 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,242 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,246 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,249 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,253 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,256 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,260 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,264 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,267 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,270 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,274 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,277 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,281 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,285 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,288 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,292 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,296 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,299 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,303 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,307 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,310 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,314 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,318 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,321 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,325 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,329 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,332 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,336 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,339 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,343 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,347 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,351 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,355 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,359 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,362 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,366 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,370 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,374 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,377 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,382 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,385 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,389 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,393 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,397 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,400 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,404 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,408 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,412 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,416 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,419 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,423 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,427 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,431 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,434 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,438 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,442 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,446 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,450 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,453 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,457 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,461 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,464 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,468 copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,472 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,476 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,480 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,484 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,487 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,491 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,495 copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,499 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,503 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,506 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,510 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,514 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,517 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,521 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,526 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,530 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,533 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,537 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,540 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,544 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,547 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,551 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,555 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,558 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,562 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,565 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2022-04-01T01:01:28,569 creating build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,570 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,574 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,578 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,582 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,585 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,589 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,592 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,596 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,600 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,603 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,607 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,610 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2022-04-01T01:01:28,614 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,615 copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,619 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,623 copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,627 copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,631 copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,635 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,638 copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,642 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,646 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,649 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,653 copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,657 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,660 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,664 copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,669 copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,672 copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,676 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,679 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,683 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,687 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,691 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,694 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,698 copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,701 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,705 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,709 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,712 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,716 copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,720 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,724 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,727 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,731 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,735 copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,738 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,742 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,745 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,749 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,753 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,756 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,760 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2022-04-01T01:01:28,763 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,765 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,768 copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,772 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,776 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,779 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,783 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,786 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,790 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,793 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,798 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,802 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,806 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,809 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,813 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,816 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,820 copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,826 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,830 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,835 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,838 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,842 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,846 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,849 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,853 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2022-04-01T01:01:28,856 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data 2022-04-01T01:01:28,857 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-04-01T01:01:28,859 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-04-01T01:01:28,863 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-04-01T01:01:28,867 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-04-01T01:01:28,870 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-04-01T01:01:28,874 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data 2022-04-01T01:01:28,874 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,876 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,880 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,884 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,887 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,891 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,895 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:01:28,950 running build_ext 2022-04-01T01:01:28,965 creating build/temp.linux-armv7l-3.9 2022-04-01T01:01:28,966 creating build/temp.linux-armv7l-3.9/skbio 2022-04-01T01:01:28,967 creating build/temp.linux-armv7l-3.9/skbio/metadata 2022-04-01T01:01:28,968 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-3.9/skbio/metadata/_intersection.o 2022-04-01T01:01:30,274 skbio/metadata/_intersection.c: In function ‘__Pyx_ParseOptionalKeywords’: 2022-04-01T01:01:30,293 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,293 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,294 | ^ 2022-04-01T01:01:30,296 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,296 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,296 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,297 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,297 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,297 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,320 skbio/metadata/_intersection.c:11013:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,321 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,321 | ^ 2022-04-01T01:01:30,322 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,322 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,322 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,323 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2022-04-01T01:01:30,323 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2022-04-01T01:01:30,323 | ^~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,343 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,343 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,344 | ^ 2022-04-01T01:01:30,344 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,344 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,345 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,345 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,345 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,346 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,365 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,366 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,366 | ^ 2022-04-01T01:01:30,366 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,366 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,367 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,367 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,367 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,368 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,387 skbio/metadata/_intersection.c:11013:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,387 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,388 | ^ 2022-04-01T01:01:30,388 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,388 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,389 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,389 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2022-04-01T01:01:30,389 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2022-04-01T01:01:30,390 | ^~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,409 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,410 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,410 | ^ 2022-04-01T01:01:30,410 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,411 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,411 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,411 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,411 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,412 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,436 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,436 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,437 | ^ 2022-04-01T01:01:30,437 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,437 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,437 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,438 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,438 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,438 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,458 skbio/metadata/_intersection.c:11029:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,458 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,458 | ^ 2022-04-01T01:01:30,459 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,459 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,459 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,460 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2022-04-01T01:01:30,460 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2022-04-01T01:01:30,460 | ^~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,480 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,480 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,480 | ^ 2022-04-01T01:01:30,481 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,481 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,481 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,482 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,482 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,482 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,502 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,502 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,503 | ^ 2022-04-01T01:01:30,503 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,503 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,504 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,504 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,504 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,504 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,524 skbio/metadata/_intersection.c:11029:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,524 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,525 | ^ 2022-04-01T01:01:30,525 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,525 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,525 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,526 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2022-04-01T01:01:30,526 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2022-04-01T01:01:30,526 | ^~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:30,546 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2022-04-01T01:01:30,547 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2022-04-01T01:01:30,547 | ^ 2022-04-01T01:01:30,547 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2022-04-01T01:01:30,548 from /usr/include/python3.9/Python.h:97, 2022-04-01T01:01:30,548 from skbio/metadata/_intersection.c:17: 2022-04-01T01:01:30,548 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2022-04-01T01:01:30,548 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2022-04-01T01:01:30,549 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-04-01T01:01:52,581 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/skbio/metadata/_intersection.o -L/usr/lib -o build/lib.linux-armv7l-3.9/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so 2022-04-01T01:01:52,886 creating build/temp.linux-armv7l-3.9/skbio/stats 2022-04-01T01:01:52,888 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/__subsample.c -o build/temp.linux-armv7l-3.9/skbio/stats/__subsample.o 2022-04-01T01:01:53,623 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1960, 2022-04-01T01:01:53,623 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-04-01T01:01:53,623 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-04-01T01:01:53,624 from skbio/stats/__subsample.c:709: 2022-04-01T01:01:53,624 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-04-01T01:01:53,625 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-04-01T01:01:53,625 | ^~~~~~~ 2022-04-01T01:01:59,309 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/skbio/stats/__subsample.o -L/usr/lib -o build/lib.linux-armv7l-3.9/skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so 2022-04-01T01:01:59,550 creating build/temp.linux-armv7l-3.9/skbio/alignment 2022-04-01T01:01:59,551 creating build/temp.linux-armv7l-3.9/skbio/alignment/_lib 2022-04-01T01:01:59,553 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Iskbio/alignment -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-3.9/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-04-01T01:02:06,941 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Iskbio/alignment -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-armv7l-3.9/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-04-01T01:02:07,707 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1960, 2022-04-01T01:02:07,707 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-04-01T01:02:07,708 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-04-01T01:02:07,708 from skbio/alignment/_ssw_wrapper.c:718: 2022-04-01T01:02:07,708 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-04-01T01:02:07,709 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-04-01T01:02:07,709 | ^~~~~~~ 2022-04-01T01:02:31,187 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/skbio/alignment/_lib/ssw.o build/temp.linux-armv7l-3.9/skbio/alignment/_ssw_wrapper.o -L/usr/lib -o build/lib.linux-armv7l-3.9/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so 2022-04-01T01:02:31,507 creating build/temp.linux-armv7l-3.9/skbio/diversity 2022-04-01T01:02:31,508 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-armv7l-3.9/skbio/diversity/_phylogenetic.o 2022-04-01T01:02:32,258 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1960, 2022-04-01T01:02:32,258 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-04-01T01:02:32,259 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-04-01T01:02:32,259 from skbio/diversity/_phylogenetic.c:709: 2022-04-01T01:02:32,260 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-04-01T01:02:32,260 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-04-01T01:02:32,260 | ^~~~~~~ 2022-04-01T01:02:43,275 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/skbio/diversity/_phylogenetic.o -L/usr/lib -o build/lib.linux-armv7l-3.9/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so 2022-04-01T01:02:43,536 creating build/temp.linux-armv7l-3.9/skbio/stats/ordination 2022-04-01T01:02:43,537 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-armv7l-3.9/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-04-01T01:03:25,548 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/skbio/stats/ordination/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-3.9/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so 2022-04-01T01:03:25,917 creating build/temp.linux-armv7l-3.9/skbio/stats/distance 2022-04-01T01:03:25,918 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/distance/_cutils.c -o build/temp.linux-armv7l-3.9/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-04-01T01:04:12,869 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/skbio/stats/distance/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-3.9/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so 2022-04-01T01:04:13,284 running install 2022-04-01T01:04:13,349 running install_lib 2022-04-01T01:04:13,356 creating build/bdist.linux-armv7l 2022-04-01T01:04:13,357 creating build/bdist.linux-armv7l/wheel 2022-04-01T01:04:13,360 creating build/bdist.linux-armv7l/wheel/skbio 2022-04-01T01:04:13,363 creating build/bdist.linux-armv7l/wheel/skbio/tree 2022-04-01T01:04:13,369 creating build/bdist.linux-armv7l/wheel/skbio/tree/tests 2022-04-01T01:04:13,407 creating build/bdist.linux-armv7l/wheel/skbio/sequence 2022-04-01T01:04:13,419 creating build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-04-01T01:04:13,495 creating build/bdist.linux-armv7l/wheel/skbio/util 2022-04-01T01:04:13,507 creating build/bdist.linux-armv7l/wheel/skbio/util/tests 2022-04-01T01:04:13,536 creating build/bdist.linux-armv7l/wheel/skbio/tests 2022-04-01T01:04:13,552 creating build/bdist.linux-armv7l/wheel/skbio/metadata 2022-04-01T01:04:13,559 creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2022-04-01T01:04:13,639 creating build/bdist.linux-armv7l/wheel/skbio/io 2022-04-01T01:04:13,648 creating build/bdist.linux-armv7l/wheel/skbio/io/tests 2022-04-01T01:04:13,651 creating build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-04-01T01:04:13,705 creating build/bdist.linux-armv7l/wheel/skbio/io/format 2022-04-01T01:04:13,717 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-04-01T01:04:13,732 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-04-01T01:04:14,925 creating build/bdist.linux-armv7l/wheel/skbio/alignment 2022-04-01T01:04:14,934 creating build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2022-04-01T01:04:14,973 creating build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2022-04-01T01:04:15,025 creating build/bdist.linux-armv7l/wheel/skbio/stats 2022-04-01T01:04:15,042 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-04-01T01:04:15,053 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-04-01T01:04:15,057 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-04-01T01:04:15,310 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-04-01T01:04:15,313 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-04-01T01:04:15,391 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2022-04-01T01:04:15,393 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2022-04-01T01:04:15,426 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-04-01T01:04:15,434 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-04-01T01:04:15,441 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-04-01T01:04:15,639 creating build/bdist.linux-armv7l/wheel/skbio/diversity 2022-04-01T01:04:15,642 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-04-01T01:04:15,649 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-04-01T01:04:15,651 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data 2022-04-01T01:04:15,654 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-04-01T01:04:15,717 creating build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2022-04-01T01:04:15,740 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2022-04-01T01:04:15,743 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2022-04-01T01:04:15,745 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data 2022-04-01T01:04:15,748 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-04-01T01:04:15,830 creating build/bdist.linux-armv7l/wheel/benchmarks 2022-04-01T01:04:15,837 running install_egg_info 2022-04-01T01:04:15,884 running egg_info 2022-04-01T01:04:16,421 no previously-included directories found matching 'doc/build' 2022-04-01T01:04:16,426 no previously-included directories found matching 'doc/source/generated' 2022-04-01T01:04:16,438 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-04-01T01:04:16,450 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2022-04-01T01:04:16,461 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-04-01T01:04:16,470 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2022-04-01T01:04:16,480 warning: no previously-included files matching '.coverage' found anywhere in distribution 2022-04-01T01:04:16,598 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2022-04-01T01:04:16,604 Copying scikit_bio.egg-info to build/bdist.linux-armv7l/wheel/scikit_bio-0.5.7-py3.9.egg-info 2022-04-01T01:04:16,627 running install_scripts 2022-04-01T01:04:21,683 Building wheel for scikit-bio (pyproject.toml): finished with status 'done' 2022-04-01T01:04:21,824 Created wheel for scikit-bio: filename=scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl size=2468426 sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b 2022-04-01T01:04:21,826 Stored in directory: /tmp/pip-ephem-wheel-cache-4hna6r9v/wheels/bd/99/cb/1798181f4caebfd153d70412cabea38b4885f41ad7563ac001 2022-04-01T01:04:21,898 Successfully built scikit-bio 2022-04-01T01:04:22,055 Removed build tracker: '/tmp/pip-req-tracker-ji8c5f3r'