2022-04-06T00:19:07,306 Created temporary directory: /tmp/pip-ephem-wheel-cache-747s04u9 2022-04-06T00:19:07,311 Created temporary directory: /tmp/pip-req-tracker-rkiju_bq 2022-04-06T00:19:07,312 Initialized build tracking at /tmp/pip-req-tracker-rkiju_bq 2022-04-06T00:19:07,313 Created build tracker: /tmp/pip-req-tracker-rkiju_bq 2022-04-06T00:19:07,313 Entered build tracker: /tmp/pip-req-tracker-rkiju_bq 2022-04-06T00:19:07,314 Created temporary directory: /tmp/pip-wheel-0lrs4si7 2022-04-06T00:19:07,385 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T00:19:07,393 2 location(s) to search for versions of bionty: 2022-04-06T00:19:07,393 * https://pypi.org/simple/bionty/ 2022-04-06T00:19:07,393 * https://www.piwheels.org/simple/bionty/ 2022-04-06T00:19:07,395 Fetching project page and analyzing links: https://pypi.org/simple/bionty/ 2022-04-06T00:19:07,396 Getting page https://pypi.org/simple/bionty/ 2022-04-06T00:19:07,400 Found index url https://pypi.org/simple 2022-04-06T00:19:07,516 Found link https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 (from https://pypi.org/simple/bionty/), version: 0.0.3 2022-04-06T00:19:07,516 Found link https://files.pythonhosted.org/packages/9c/ab/90bdb78b4dd749db544bb90255c28f6469bdc05ae068d25034f45832d418/bionty-0.0.4.tar.gz#sha256=3ae3f67cea4b64ccbcb2ed394c7ecf26e47224bd2beec7d086da3b638b4a7448 (from https://pypi.org/simple/bionty/), version: 0.0.4 2022-04-06T00:19:07,517 Fetching project page and analyzing links: https://www.piwheels.org/simple/bionty/ 2022-04-06T00:19:07,518 Getting page https://www.piwheels.org/simple/bionty/ 2022-04-06T00:19:07,520 Found index url https://www.piwheels.org/simple 2022-04-06T00:19:07,744 Skipping link: not a file: https://www.piwheels.org/simple/bionty/ 2022-04-06T00:19:07,744 Skipping link: not a file: https://pypi.org/simple/bionty/ 2022-04-06T00:19:07,789 Given no hashes to check 1 links for project 'bionty': discarding no candidates 2022-04-06T00:19:07,830 Collecting bionty==0.0.3 2022-04-06T00:19:07,834 Created temporary directory: /tmp/pip-unpack-ynpbvczw 2022-04-06T00:19:07,922 Downloading bionty-0.0.3.tar.gz (28 kB) 2022-04-06T00:19:08,045 Added bionty==0.0.3 from https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 to build tracker '/tmp/pip-req-tracker-rkiju_bq' 2022-04-06T00:19:08,056 Created temporary directory: /tmp/pip-build-env-4w__npcz 2022-04-06T00:19:08,076 Created temporary directory: /tmp/pip-standalone-pip-7jhk8tbl 2022-04-06T00:19:10,257 Installing build dependencies: started 2022-04-06T00:19:10,259 Running command pip subprocess to install build dependencies 2022-04-06T00:19:21,955 Using pip 22.0.4 from /tmp/pip-standalone-pip-7jhk8tbl/__env_pip__.zip/pip (python 3.9) 2022-04-06T00:19:23,418 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T00:19:24,071 Collecting flit_core<4,>=3.2 2022-04-06T00:19:24,582 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.7.1-py3-none-any.whl (60 kB) 2022-04-06T00:19:27,803 Installing collected packages: flit_core 2022-04-06T00:19:28,476 Successfully installed flit_core-3.7.1 2022-04-06T00:19:29,070 Installing build dependencies: finished with status 'done' 2022-04-06T00:19:29,096 Getting requirements to build wheel: started 2022-04-06T00:19:29,098 Running command Getting requirements to build wheel 2022-04-06T00:19:29,776 Getting requirements to build wheel: finished with status 'done' 2022-04-06T00:19:29,932 Created temporary directory: /tmp/pip-standalone-pip-2tv5uqd2 2022-04-06T00:19:32,042 Installing backend dependencies: started 2022-04-06T00:19:32,044 Running command pip subprocess to install backend dependencies 2022-04-06T00:19:43,802 Using pip 22.0.4 from /tmp/pip-standalone-pip-2tv5uqd2/__env_pip__.zip/pip (python 3.9) 2022-04-06T00:19:45,307 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T00:19:45,310 Ignoring sphinx-book-theme: markers 'extra == "doc"' don't match your environment 2022-04-06T00:19:45,311 Ignoring pre-commit: markers 'extra == "dev"' don't match your environment 2022-04-06T00:19:45,313 Ignoring pytest: markers 'extra == "test"' don't match your environment 2022-04-06T00:19:45,315 Ignoring mygene: markers 'extra == "test"' don't match your environment 2022-04-06T00:19:45,317 Ignoring sphinx_autodoc_typehints: markers 'extra == "doc"' don't match your environment 2022-04-06T00:19:45,319 Ignoring black: markers 'extra == "dev"' don't match your environment 2022-04-06T00:19:45,321 Ignoring scanpy: markers 'extra == "test"' don't match your environment 2022-04-06T00:19:45,322 Ignoring myst_nb: markers 'extra == "doc"' don't match your environment 2022-04-06T00:19:45,324 Ignoring nbmake: markers 'extra == "test"' don't match your environment 2022-04-06T00:19:45,326 Ignoring biomart: markers 'extra == "test"' don't match your environment 2022-04-06T00:19:45,897 Collecting loguru 2022-04-06T00:19:45,918 Downloading https://www.piwheels.org/simple/loguru/loguru-0.6.0-py3-none-any.whl (65 kB) 2022-04-06T00:19:45,966 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 65.1/65.1 KB 2.4 MB/s eta 0:00:00 2022-04-06T00:19:46,866 Collecting anndata 2022-04-06T00:19:46,974 Downloading https://www.piwheels.org/simple/anndata/anndata-0.8.0-py3-none-any.whl (96 kB) 2022-04-06T00:19:47,031 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 96.1/96.1 KB 2.5 MB/s eta 0:00:00 2022-04-06T00:19:49,849 Collecting pandas 2022-04-06T00:19:49,868 Downloading https://www.piwheels.org/simple/pandas/pandas-1.4.2-cp39-cp39-linux_armv7l.whl (36.0 MB) 2022-04-06T00:19:58,289 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 36.0/36.0 MB 2.1 MB/s eta 0:00:00 2022-04-06T00:20:02,022 Collecting scipy>1.4 2022-04-06T00:20:15,289 Using cached https://www.piwheels.org/simple/scipy/scipy-1.8.0-cp39-cp39-linux_armv7l.whl (72.0 MB) 2022-04-06T00:20:23,742 Collecting numpy>=1.16.5 2022-04-06T00:20:26,215 Using cached https://www.piwheels.org/simple/numpy/numpy-1.22.3-cp39-cp39-linux_armv7l.whl (12.9 MB) 2022-04-06T00:20:28,033 Collecting h5py>=3 2022-04-06T00:20:29,220 Using cached https://www.piwheels.org/simple/h5py/h5py-3.6.0-cp39-cp39-linux_armv7l.whl (5.6 MB) 2022-04-06T00:20:30,086 Collecting packaging>=20 2022-04-06T00:20:30,119 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-04-06T00:20:30,694 Collecting natsort 2022-04-06T00:20:30,770 Downloading https://www.piwheels.org/simple/natsort/natsort-8.1.0-py3-none-any.whl (37 kB) 2022-04-06T00:20:31,195 Collecting python-dateutil>=2.8.1 2022-04-06T00:20:31,335 Using cached https://www.piwheels.org/simple/python-dateutil/python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) 2022-04-06T00:20:32,363 Collecting pytz>=2020.1 2022-04-06T00:20:32,501 Using cached https://www.piwheels.org/simple/pytz/pytz-2022.1-py3-none-any.whl (511 kB) 2022-04-06T00:20:33,397 Collecting pyparsing!=3.0.5,>=2.0.2 2022-04-06T00:20:33,435 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.7-py3-none-any.whl (98 kB) 2022-04-06T00:20:33,740 Collecting six>=1.5 2022-04-06T00:20:33,828 Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB) 2022-04-06T00:20:38,136 Installing collected packages: pytz, six, pyparsing, numpy, natsort, loguru, scipy, python-dateutil, packaging, h5py, pandas, anndata 2022-04-06T00:20:59,217 Creating /tmp/pip-build-env-4w__npcz/normal/bin 2022-04-06T00:20:59,222 changing mode of /tmp/pip-build-env-4w__npcz/normal/bin/f2py to 755 2022-04-06T00:20:59,227 changing mode of /tmp/pip-build-env-4w__npcz/normal/bin/f2py3 to 755 2022-04-06T00:20:59,232 changing mode of /tmp/pip-build-env-4w__npcz/normal/bin/f2py3.9 to 755 2022-04-06T00:20:59,875 changing mode of /tmp/pip-build-env-4w__npcz/normal/bin/natsort to 755 2022-04-06T00:22:27,399 Successfully installed anndata-0.8.0 h5py-3.6.0 loguru-0.6.0 natsort-8.1.0 numpy-1.22.3 packaging-21.3 pandas-1.4.2 pyparsing-3.0.7 python-dateutil-2.8.2 pytz-2022.1 scipy-1.8.0 six-1.16.0 2022-04-06T00:22:28,327 Installing backend dependencies: finished with status 'done' 2022-04-06T00:22:28,347 Created temporary directory: /tmp/pip-modern-metadata-yxd0pn9n 2022-04-06T00:22:28,355 Preparing metadata (pyproject.toml): started 2022-04-06T00:22:28,357 Running command Preparing metadata (pyproject.toml) 2022-04-06T00:22:31,923 Preparing metadata (pyproject.toml): finished with status 'done' 2022-04-06T00:22:31,938 WARNING: Requested bionty==0.0.3 from https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4, but installing version 0+unknown 2022-04-06T00:22:31,943 Removed bionty==0.0.3 from https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 from build tracker '/tmp/pip-req-tracker-rkiju_bq' 2022-04-06T00:22:31,947 Discarding [blue underline]https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 (from https://pypi.org/simple/bionty/)[/]: [yellow]Requested bionty==0.0.3 from https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 has inconsistent version: filename has '0.0.3', but metadata has '0+unknown'[reset] 2022-04-06T00:22:31,954 ERROR: Could not find a version that satisfies the requirement bionty==0.0.3 (from versions: 0.0.3, 0.0.4) 2022-04-06T00:22:31,956 ERROR: No matching distribution found for bionty==0.0.3 2022-04-06T00:22:31,958 Exception information: 2022-04-06T00:22:31,958 Traceback (most recent call last): 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2022-04-06T00:22:31,958 self._add_to_criteria(self.state.criteria, r, parent=None) 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2022-04-06T00:22:31,958 raise RequirementsConflicted(criterion) 2022-04-06T00:22:31,958 pip._vendor.resolvelib.resolvers.RequirementsConflicted: Requirements conflict: SpecifierRequirement('bionty==0.0.3') 2022-04-06T00:22:31,958 2022-04-06T00:22:31,958 During handling of the above exception, another exception occurred: 2022-04-06T00:22:31,958 2022-04-06T00:22:31,958 Traceback (most recent call last): 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 94, in resolve 2022-04-06T00:22:31,958 result = self._result = resolver.resolve( 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2022-04-06T00:22:31,958 state = resolution.resolve(requirements, max_rounds=max_rounds) 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 350, in resolve 2022-04-06T00:22:31,958 raise ResolutionImpossible(e.criterion.information) 2022-04-06T00:22:31,958 pip._vendor.resolvelib.resolvers.ResolutionImpossible: [RequirementInformation(requirement=SpecifierRequirement('bionty==0.0.3'), parent=None)] 2022-04-06T00:22:31,958 2022-04-06T00:22:31,958 The above exception was the direct cause of the following exception: 2022-04-06T00:22:31,958 2022-04-06T00:22:31,958 Traceback (most recent call last): 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper 2022-04-06T00:22:31,958 status = run_func(*args) 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-04-06T00:22:31,958 return func(self, options, args) 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 145, in run 2022-04-06T00:22:31,958 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2022-04-06T00:22:31,958 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 103, in resolve 2022-04-06T00:22:31,958 raise error from e 2022-04-06T00:22:31,958 pip._internal.exceptions.DistributionNotFound: No matching distribution found for bionty==0.0.3 2022-04-06T00:22:31,969 Removed build tracker: '/tmp/pip-req-tracker-rkiju_bq'