2022-04-06T09:45:21,199 Created temporary directory: /tmp/pip-ephem-wheel-cache-4cba_yy9 2022-04-06T09:45:21,204 Created temporary directory: /tmp/pip-req-tracker-qdu9ukcr 2022-04-06T09:45:21,205 Initialized build tracking at /tmp/pip-req-tracker-qdu9ukcr 2022-04-06T09:45:21,205 Created build tracker: /tmp/pip-req-tracker-qdu9ukcr 2022-04-06T09:45:21,206 Entered build tracker: /tmp/pip-req-tracker-qdu9ukcr 2022-04-06T09:45:21,207 Created temporary directory: /tmp/pip-wheel-h3y_noo4 2022-04-06T09:45:21,282 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T09:45:21,290 2 location(s) to search for versions of bionty: 2022-04-06T09:45:21,290 * https://pypi.org/simple/bionty/ 2022-04-06T09:45:21,290 * https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:21,292 Fetching project page and analyzing links: https://pypi.org/simple/bionty/ 2022-04-06T09:45:21,293 Getting page https://pypi.org/simple/bionty/ 2022-04-06T09:45:21,296 Found index url https://pypi.org/simple 2022-04-06T09:45:21,410 Found link https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 (from https://pypi.org/simple/bionty/), version: 0.0.3 2022-04-06T09:45:21,411 Found link https://files.pythonhosted.org/packages/9c/ab/90bdb78b4dd749db544bb90255c28f6469bdc05ae068d25034f45832d418/bionty-0.0.4.tar.gz#sha256=3ae3f67cea4b64ccbcb2ed394c7ecf26e47224bd2beec7d086da3b638b4a7448 (from https://pypi.org/simple/bionty/), version: 0.0.4 2022-04-06T09:45:21,412 Found link https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114 (from https://pypi.org/simple/bionty/), version: 0.0.5 2022-04-06T09:45:21,413 Found link https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a (from https://pypi.org/simple/bionty/), version: 0.0.6 2022-04-06T09:45:21,413 Fetching project page and analyzing links: https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:21,414 Getting page https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:21,416 Found index url https://www.piwheels.org/simple 2022-04-06T09:45:21,630 Skipping link: not a file: https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:21,631 Skipping link: not a file: https://pypi.org/simple/bionty/ 2022-04-06T09:45:21,676 Given no hashes to check 1 links for project 'bionty': discarding no candidates 2022-04-06T09:45:21,718 Collecting bionty==0.0.6 2022-04-06T09:45:21,722 Created temporary directory: /tmp/pip-unpack-n7o09btz 2022-04-06T09:45:21,812 Downloading bionty-0.0.6.tar.gz (30 kB) 2022-04-06T09:45:21,963 Added bionty==0.0.6 from https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a to build tracker '/tmp/pip-req-tracker-qdu9ukcr' 2022-04-06T09:45:21,979 Created temporary directory: /tmp/pip-build-env-ixh9ltmz 2022-04-06T09:45:22,000 Created temporary directory: /tmp/pip-standalone-pip-g2yis1qy 2022-04-06T09:45:24,246 Installing build dependencies: started 2022-04-06T09:45:24,248 Running command pip subprocess to install build dependencies 2022-04-06T09:45:35,940 Using pip 22.0.4 from /tmp/pip-standalone-pip-g2yis1qy/__env_pip__.zip/pip (python 3.9) 2022-04-06T09:45:37,443 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T09:45:38,171 Collecting flit_core<4,>=3.2 2022-04-06T09:45:38,240 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.7.1-py3-none-any.whl (60 kB) 2022-04-06T09:45:41,984 Installing collected packages: flit_core 2022-04-06T09:45:42,682 Successfully installed flit_core-3.7.1 2022-04-06T09:45:43,290 Installing build dependencies: finished with status 'done' 2022-04-06T09:45:43,315 Getting requirements to build wheel: started 2022-04-06T09:45:43,317 Running command Getting requirements to build wheel 2022-04-06T09:45:44,021 Getting requirements to build wheel: finished with status 'done' 2022-04-06T09:45:44,177 Created temporary directory: /tmp/pip-standalone-pip-62u29edd 2022-04-06T09:45:46,345 Installing backend dependencies: started 2022-04-06T09:45:46,347 Running command pip subprocess to install backend dependencies 2022-04-06T09:45:58,048 Using pip 22.0.4 from /tmp/pip-standalone-pip-62u29edd/__env_pip__.zip/pip (python 3.9) 2022-04-06T09:45:59,600 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T09:45:59,602 Ignoring mygene: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:59,604 Ignoring myst_nb: markers 'extra == "doc"' don't match your environment 2022-04-06T09:45:59,606 Ignoring pre-commit: markers 'extra == "dev"' don't match your environment 2022-04-06T09:45:59,608 Ignoring pytest: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:59,610 Ignoring nbmake: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:59,612 Ignoring black: markers 'extra == "dev"' don't match your environment 2022-04-06T09:45:59,613 Ignoring sphinx_autodoc_typehints: markers 'extra == "doc"' don't match your environment 2022-04-06T09:45:59,615 Ignoring scanpy: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:59,617 Ignoring biomart: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:59,619 Ignoring sphinx-book-theme: markers 'extra == "doc"' don't match your environment 2022-04-06T09:46:00,259 Collecting loguru 2022-04-06T09:46:00,290 Downloading https://www.piwheels.org/simple/loguru/loguru-0.6.0-py3-none-any.whl (65 kB) 2022-04-06T09:46:00,337 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 65.1/65.1 KB 2.4 MB/s eta 0:00:00 2022-04-06T09:46:00,910 Collecting anndata 2022-04-06T09:46:00,998 Using cached https://www.piwheels.org/simple/anndata/anndata-0.8.0-py3-none-any.whl (96 kB) 2022-04-06T09:46:03,152 Collecting pandas 2022-04-06T09:46:10,294 Using cached https://www.piwheels.org/simple/pandas/pandas-1.4.2-cp39-cp39-linux_armv7l.whl (36.0 MB) 2022-04-06T09:46:13,907 Collecting packaging>=20 2022-04-06T09:46:13,941 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-04-06T09:46:17,506 Collecting numpy>=1.16.5 2022-04-06T09:46:20,129 Using cached https://www.piwheels.org/simple/numpy/numpy-1.22.3-cp39-cp39-linux_armv7l.whl (12.9 MB) 2022-04-06T09:46:21,687 Collecting natsort 2022-04-06T09:46:21,759 Using cached https://www.piwheels.org/simple/natsort/natsort-8.1.0-py3-none-any.whl (37 kB) 2022-04-06T09:46:22,564 Collecting h5py>=3 2022-04-06T09:46:23,651 Using cached https://www.piwheels.org/simple/h5py/h5py-3.6.0-cp39-cp39-linux_armv7l.whl (5.6 MB) 2022-04-06T09:46:26,488 Collecting scipy>1.4 2022-04-06T09:46:39,813 Using cached https://www.piwheels.org/simple/scipy/scipy-1.8.0-cp39-cp39-linux_armv7l.whl (72.0 MB) 2022-04-06T09:46:45,250 Collecting python-dateutil>=2.8.1 2022-04-06T09:46:45,317 Using cached https://www.piwheels.org/simple/python-dateutil/python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) 2022-04-06T09:46:46,301 Collecting pytz>=2020.1 2022-04-06T09:46:46,443 Using cached https://www.piwheels.org/simple/pytz/pytz-2022.1-py3-none-any.whl (511 kB) 2022-04-06T09:46:47,349 Collecting pyparsing!=3.0.5,>=2.0.2 2022-04-06T09:46:47,402 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.7-py3-none-any.whl (98 kB) 2022-04-06T09:46:47,709 Collecting six>=1.5 2022-04-06T09:46:47,758 Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB) 2022-04-06T09:46:52,136 Installing collected packages: pytz, six, pyparsing, numpy, natsort, loguru, scipy, python-dateutil, packaging, h5py, pandas, anndata 2022-04-06T09:47:13,156 Creating /tmp/pip-build-env-ixh9ltmz/normal/bin 2022-04-06T09:47:13,161 changing mode of /tmp/pip-build-env-ixh9ltmz/normal/bin/f2py to 755 2022-04-06T09:47:13,165 changing mode of /tmp/pip-build-env-ixh9ltmz/normal/bin/f2py3 to 755 2022-04-06T09:47:13,169 changing mode of /tmp/pip-build-env-ixh9ltmz/normal/bin/f2py3.9 to 755 2022-04-06T09:47:13,444 changing mode of /tmp/pip-build-env-ixh9ltmz/normal/bin/natsort to 755 2022-04-06T09:48:39,030 Successfully installed anndata-0.8.0 h5py-3.6.0 loguru-0.6.0 natsort-8.1.0 numpy-1.22.3 packaging-21.3 pandas-1.4.2 pyparsing-3.0.7 python-dateutil-2.8.2 pytz-2022.1 scipy-1.8.0 six-1.16.0 2022-04-06T09:48:39,969 Installing backend dependencies: finished with status 'done' 2022-04-06T09:48:39,991 Created temporary directory: /tmp/pip-modern-metadata-tpw_dccw 2022-04-06T09:48:39,999 Preparing metadata (pyproject.toml): started 2022-04-06T09:48:40,001 Running command Preparing metadata (pyproject.toml) 2022-04-06T09:48:44,006 Preparing metadata (pyproject.toml): finished with status 'done' 2022-04-06T09:48:44,021 WARNING: Requested bionty==0.0.6 from https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a, but installing version 0+unknown 2022-04-06T09:48:44,026 Removed bionty==0.0.6 from https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a from build tracker '/tmp/pip-req-tracker-qdu9ukcr' 2022-04-06T09:48:44,030 Discarding [blue underline]https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a (from https://pypi.org/simple/bionty/)[/]: [yellow]Requested bionty==0.0.6 from https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a has inconsistent version: filename has '0.0.6', but metadata has '0+unknown'[reset] 2022-04-06T09:48:44,037 ERROR: Could not find a version that satisfies the requirement bionty==0.0.6 (from versions: 0.0.3, 0.0.4, 0.0.5, 0.0.6) 2022-04-06T09:48:44,039 ERROR: No matching distribution found for bionty==0.0.6 2022-04-06T09:48:44,041 Exception information: 2022-04-06T09:48:44,041 Traceback (most recent call last): 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2022-04-06T09:48:44,041 self._add_to_criteria(self.state.criteria, r, parent=None) 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2022-04-06T09:48:44,041 raise RequirementsConflicted(criterion) 2022-04-06T09:48:44,041 pip._vendor.resolvelib.resolvers.RequirementsConflicted: Requirements conflict: SpecifierRequirement('bionty==0.0.6') 2022-04-06T09:48:44,041 2022-04-06T09:48:44,041 During handling of the above exception, another exception occurred: 2022-04-06T09:48:44,041 2022-04-06T09:48:44,041 Traceback (most recent call last): 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 94, in resolve 2022-04-06T09:48:44,041 result = self._result = resolver.resolve( 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2022-04-06T09:48:44,041 state = resolution.resolve(requirements, max_rounds=max_rounds) 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 350, in resolve 2022-04-06T09:48:44,041 raise ResolutionImpossible(e.criterion.information) 2022-04-06T09:48:44,041 pip._vendor.resolvelib.resolvers.ResolutionImpossible: [RequirementInformation(requirement=SpecifierRequirement('bionty==0.0.6'), parent=None)] 2022-04-06T09:48:44,041 2022-04-06T09:48:44,041 The above exception was the direct cause of the following exception: 2022-04-06T09:48:44,041 2022-04-06T09:48:44,041 Traceback (most recent call last): 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper 2022-04-06T09:48:44,041 status = run_func(*args) 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-04-06T09:48:44,041 return func(self, options, args) 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 145, in run 2022-04-06T09:48:44,041 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2022-04-06T09:48:44,041 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 103, in resolve 2022-04-06T09:48:44,041 raise error from e 2022-04-06T09:48:44,041 pip._internal.exceptions.DistributionNotFound: No matching distribution found for bionty==0.0.6 2022-04-06T09:48:44,053 Removed build tracker: '/tmp/pip-req-tracker-qdu9ukcr'