2022-04-06T09:45:19,682 Created temporary directory: /tmp/pip-ephem-wheel-cache-jb_v0zmu 2022-04-06T09:45:19,688 Created temporary directory: /tmp/pip-req-tracker-wfzw73_s 2022-04-06T09:45:19,689 Initialized build tracking at /tmp/pip-req-tracker-wfzw73_s 2022-04-06T09:45:19,689 Created build tracker: /tmp/pip-req-tracker-wfzw73_s 2022-04-06T09:45:19,689 Entered build tracker: /tmp/pip-req-tracker-wfzw73_s 2022-04-06T09:45:19,690 Created temporary directory: /tmp/pip-wheel-xldvc7_y 2022-04-06T09:45:19,764 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T09:45:19,773 2 location(s) to search for versions of bionty: 2022-04-06T09:45:19,773 * https://pypi.org/simple/bionty/ 2022-04-06T09:45:19,773 * https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:19,774 Fetching project page and analyzing links: https://pypi.org/simple/bionty/ 2022-04-06T09:45:19,775 Getting page https://pypi.org/simple/bionty/ 2022-04-06T09:45:19,778 Found index url https://pypi.org/simple 2022-04-06T09:45:19,913 Found link https://files.pythonhosted.org/packages/7e/c8/e48f993774b7c9a1e789644d06eed8ab91b2791f27e787e0e3e90b86be43/bionty-0.0.3.tar.gz#sha256=ef4ae5b3ea325ee3e7e6dd23ba09226dc96ee3d6fdd50c1e886fc582d88817e4 (from https://pypi.org/simple/bionty/), version: 0.0.3 2022-04-06T09:45:19,914 Found link https://files.pythonhosted.org/packages/9c/ab/90bdb78b4dd749db544bb90255c28f6469bdc05ae068d25034f45832d418/bionty-0.0.4.tar.gz#sha256=3ae3f67cea4b64ccbcb2ed394c7ecf26e47224bd2beec7d086da3b638b4a7448 (from https://pypi.org/simple/bionty/), version: 0.0.4 2022-04-06T09:45:19,914 Found link https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114 (from https://pypi.org/simple/bionty/), version: 0.0.5 2022-04-06T09:45:19,915 Found link https://files.pythonhosted.org/packages/84/63/5db245a3392b0d7b3f90f162bd347c1a4f76e2f8a495dda9cfb4e7099149/bionty-0.0.6.tar.gz#sha256=5b006cd75cc8a27b732ad80ef30da53d366acfd660b82940d3ed826177f4a23a (from https://pypi.org/simple/bionty/), version: 0.0.6 2022-04-06T09:45:19,916 Fetching project page and analyzing links: https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:19,916 Getting page https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:19,918 Found index url https://www.piwheels.org/simple 2022-04-06T09:45:20,175 Skipping link: not a file: https://www.piwheels.org/simple/bionty/ 2022-04-06T09:45:20,175 Skipping link: not a file: https://pypi.org/simple/bionty/ 2022-04-06T09:45:20,221 Given no hashes to check 1 links for project 'bionty': discarding no candidates 2022-04-06T09:45:20,262 Collecting bionty==0.0.5 2022-04-06T09:45:20,267 Created temporary directory: /tmp/pip-unpack-pb1vzdna 2022-04-06T09:45:20,361 Downloading bionty-0.0.5.tar.gz (30 kB) 2022-04-06T09:45:20,527 Added bionty==0.0.5 from https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114 to build tracker '/tmp/pip-req-tracker-wfzw73_s' 2022-04-06T09:45:20,538 Created temporary directory: /tmp/pip-build-env-akxtx_pa 2022-04-06T09:45:20,558 Created temporary directory: /tmp/pip-standalone-pip-xsse0dkr 2022-04-06T09:45:22,896 Installing build dependencies: started 2022-04-06T09:45:22,898 Running command pip subprocess to install build dependencies 2022-04-06T09:45:34,618 Using pip 22.0.4 from /tmp/pip-standalone-pip-xsse0dkr/__env_pip__.zip/pip (python 3.9) 2022-04-06T09:45:36,128 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T09:45:37,024 Collecting flit_core<4,>=3.2 2022-04-06T09:45:37,081 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.7.1-py3-none-any.whl (60 kB) 2022-04-06T09:45:40,832 Installing collected packages: flit_core 2022-04-06T09:45:41,502 Successfully installed flit_core-3.7.1 2022-04-06T09:45:42,103 Installing build dependencies: finished with status 'done' 2022-04-06T09:45:42,128 Getting requirements to build wheel: started 2022-04-06T09:45:42,130 Running command Getting requirements to build wheel 2022-04-06T09:45:42,805 Getting requirements to build wheel: finished with status 'done' 2022-04-06T09:45:42,963 Created temporary directory: /tmp/pip-standalone-pip-u63_900p 2022-04-06T09:45:45,224 Installing backend dependencies: started 2022-04-06T09:45:45,226 Running command pip subprocess to install backend dependencies 2022-04-06T09:45:56,936 Using pip 22.0.4 from /tmp/pip-standalone-pip-u63_900p/__env_pip__.zip/pip (python 3.9) 2022-04-06T09:45:58,489 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-06T09:45:58,491 Ignoring black: markers 'extra == "dev"' don't match your environment 2022-04-06T09:45:58,493 Ignoring pre-commit: markers 'extra == "dev"' don't match your environment 2022-04-06T09:45:58,495 Ignoring sphinx-book-theme: markers 'extra == "doc"' don't match your environment 2022-04-06T09:45:58,496 Ignoring sphinx_autodoc_typehints: markers 'extra == "doc"' don't match your environment 2022-04-06T09:45:58,498 Ignoring pytest: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:58,500 Ignoring scanpy: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:58,502 Ignoring biomart: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:58,504 Ignoring myst_nb: markers 'extra == "doc"' don't match your environment 2022-04-06T09:45:58,506 Ignoring mygene: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:58,507 Ignoring nbmake: markers 'extra == "test"' don't match your environment 2022-04-06T09:45:59,639 Collecting anndata 2022-04-06T09:45:59,702 Downloading https://www.piwheels.org/simple/anndata/anndata-0.8.0-py3-none-any.whl (96 kB) 2022-04-06T09:45:59,761 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 96.1/96.1 KB 2.5 MB/s eta 0:00:00 2022-04-06T09:46:01,988 Collecting pandas 2022-04-06T09:46:02,045 Downloading https://www.piwheels.org/simple/pandas/pandas-1.4.2-cp39-cp39-linux_armv7l.whl (36.0 MB) 2022-04-06T09:46:10,458 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 36.0/36.0 MB 2.1 MB/s eta 0:00:00 2022-04-06T09:46:12,519 Collecting loguru 2022-04-06T09:46:12,555 Downloading https://www.piwheels.org/simple/loguru/loguru-0.6.0-py3-none-any.whl (65 kB) 2022-04-06T09:46:12,597 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 65.1/65.1 KB 2.6 MB/s eta 0:00:00 2022-04-06T09:46:13,671 Collecting h5py>=3 2022-04-06T09:46:14,885 Using cached https://www.piwheels.org/simple/h5py/h5py-3.6.0-cp39-cp39-linux_armv7l.whl (5.6 MB) 2022-04-06T09:46:15,751 Collecting packaging>=20 2022-04-06T09:46:15,845 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-04-06T09:46:17,955 Collecting scipy>1.4 2022-04-06T09:46:32,005 Using cached https://www.piwheels.org/simple/scipy/scipy-1.8.0-cp39-cp39-linux_armv7l.whl (72.0 MB) 2022-04-06T09:46:40,933 Collecting numpy>=1.16.5 2022-04-06T09:46:43,434 Using cached https://www.piwheels.org/simple/numpy/numpy-1.22.3-cp39-cp39-linux_armv7l.whl (12.9 MB) 2022-04-06T09:46:45,259 Collecting natsort 2022-04-06T09:46:45,326 Using cached https://www.piwheels.org/simple/natsort/natsort-8.1.0-py3-none-any.whl (37 kB) 2022-04-06T09:46:45,832 Collecting python-dateutil>=2.8.1 2022-04-06T09:46:45,921 Using cached https://www.piwheels.org/simple/python-dateutil/python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) 2022-04-06T09:46:46,846 Collecting pytz>=2020.1 2022-04-06T09:46:47,003 Using cached https://www.piwheels.org/simple/pytz/pytz-2022.1-py3-none-any.whl (511 kB) 2022-04-06T09:46:48,056 Collecting pyparsing!=3.0.5,>=2.0.2 2022-04-06T09:46:48,119 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.7-py3-none-any.whl (98 kB) 2022-04-06T09:46:48,436 Collecting six>=1.5 2022-04-06T09:46:48,467 Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB) 2022-04-06T09:46:52,995 Installing collected packages: pytz, six, pyparsing, numpy, natsort, loguru, scipy, python-dateutil, packaging, h5py, pandas, anndata 2022-04-06T09:47:14,163 Creating /tmp/pip-build-env-akxtx_pa/normal/bin 2022-04-06T09:47:14,167 changing mode of /tmp/pip-build-env-akxtx_pa/normal/bin/f2py to 755 2022-04-06T09:47:14,172 changing mode of /tmp/pip-build-env-akxtx_pa/normal/bin/f2py3 to 755 2022-04-06T09:47:14,176 changing mode of /tmp/pip-build-env-akxtx_pa/normal/bin/f2py3.9 to 755 2022-04-06T09:47:14,455 changing mode of /tmp/pip-build-env-akxtx_pa/normal/bin/natsort to 755 2022-04-06T09:48:40,774 Successfully installed anndata-0.8.0 h5py-3.6.0 loguru-0.6.0 natsort-8.1.0 numpy-1.22.3 packaging-21.3 pandas-1.4.2 pyparsing-3.0.7 python-dateutil-2.8.2 pytz-2022.1 scipy-1.8.0 six-1.16.0 2022-04-06T09:48:41,719 Installing backend dependencies: finished with status 'done' 2022-04-06T09:48:41,739 Created temporary directory: /tmp/pip-modern-metadata-omdtnn5c 2022-04-06T09:48:41,748 Preparing metadata (pyproject.toml): started 2022-04-06T09:48:41,750 Running command Preparing metadata (pyproject.toml) 2022-04-06T09:48:45,428 Preparing metadata (pyproject.toml): finished with status 'done' 2022-04-06T09:48:45,442 WARNING: Requested bionty==0.0.5 from https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114, but installing version 0+unknown 2022-04-06T09:48:45,447 Removed bionty==0.0.5 from https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114 from build tracker '/tmp/pip-req-tracker-wfzw73_s' 2022-04-06T09:48:45,451 Discarding [blue underline]https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114 (from https://pypi.org/simple/bionty/)[/]: [yellow]Requested bionty==0.0.5 from https://files.pythonhosted.org/packages/3f/2d/7a4d67440e6d34e21d142fdb6921ce3203b86925d1bddccfad328b1c7c0d/bionty-0.0.5.tar.gz#sha256=e59731dd0d0cb2a0646961fcbff96dd84553be22c494e9206219abea527d7114 has inconsistent version: filename has '0.0.5', but metadata has '0+unknown'[reset] 2022-04-06T09:48:45,458 ERROR: Could not find a version that satisfies the requirement bionty==0.0.5 (from versions: 0.0.3, 0.0.4, 0.0.5, 0.0.6) 2022-04-06T09:48:45,460 ERROR: No matching distribution found for bionty==0.0.5 2022-04-06T09:48:45,462 Exception information: 2022-04-06T09:48:45,462 Traceback (most recent call last): 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2022-04-06T09:48:45,462 self._add_to_criteria(self.state.criteria, r, parent=None) 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2022-04-06T09:48:45,462 raise RequirementsConflicted(criterion) 2022-04-06T09:48:45,462 pip._vendor.resolvelib.resolvers.RequirementsConflicted: Requirements conflict: SpecifierRequirement('bionty==0.0.5') 2022-04-06T09:48:45,462 2022-04-06T09:48:45,462 During handling of the above exception, another exception occurred: 2022-04-06T09:48:45,462 2022-04-06T09:48:45,462 Traceback (most recent call last): 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 94, in resolve 2022-04-06T09:48:45,462 result = self._result = resolver.resolve( 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2022-04-06T09:48:45,462 state = resolution.resolve(requirements, max_rounds=max_rounds) 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 350, in resolve 2022-04-06T09:48:45,462 raise ResolutionImpossible(e.criterion.information) 2022-04-06T09:48:45,462 pip._vendor.resolvelib.resolvers.ResolutionImpossible: [RequirementInformation(requirement=SpecifierRequirement('bionty==0.0.5'), parent=None)] 2022-04-06T09:48:45,462 2022-04-06T09:48:45,462 The above exception was the direct cause of the following exception: 2022-04-06T09:48:45,462 2022-04-06T09:48:45,462 Traceback (most recent call last): 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper 2022-04-06T09:48:45,462 status = run_func(*args) 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-04-06T09:48:45,462 return func(self, options, args) 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 145, in run 2022-04-06T09:48:45,462 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2022-04-06T09:48:45,462 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 103, in resolve 2022-04-06T09:48:45,462 raise error from e 2022-04-06T09:48:45,462 pip._internal.exceptions.DistributionNotFound: No matching distribution found for bionty==0.0.5 2022-04-06T09:48:45,473 Removed build tracker: '/tmp/pip-req-tracker-wfzw73_s'