2022-04-26T08:53:49,804 Created temporary directory: /tmp/pip-ephem-wheel-cache-0zf0f5xq
2022-04-26T08:53:49,809 Created temporary directory: /tmp/pip-req-tracker-ilkr1h4w
2022-04-26T08:53:49,810 Initialized build tracking at /tmp/pip-req-tracker-ilkr1h4w
2022-04-26T08:53:49,811 Created build tracker: /tmp/pip-req-tracker-ilkr1h4w
2022-04-26T08:53:49,811 Entered build tracker: /tmp/pip-req-tracker-ilkr1h4w
2022-04-26T08:53:49,812 Created temporary directory: /tmp/pip-wheel-h47ealy8
2022-04-26T08:53:49,875 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-04-26T08:53:49,884 2 location(s) to search for versions of fragmenstein:
2022-04-26T08:53:49,884 * https://pypi.org/simple/fragmenstein/
2022-04-26T08:53:49,884 * https://www.piwheels.org/simple/fragmenstein/
2022-04-26T08:53:49,885 Fetching project page and analyzing links: https://pypi.org/simple/fragmenstein/
2022-04-26T08:53:49,886 Getting page https://pypi.org/simple/fragmenstein/
2022-04-26T08:53:49,889 Found index url https://pypi.org/simple
2022-04-26T08:53:50,013   Found link https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 (from https://pypi.org/simple/fragmenstein/), version: 0.6
2022-04-26T08:53:50,014   Found link https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701 (from https://pypi.org/simple/fragmenstein/), version: 0.6.1
2022-04-26T08:53:50,015   Found link https://files.pythonhosted.org/packages/01/5a/80ee1256cd2c279c50e75ec982d56dcd4abe9f4ac8bb4c19c37299fe8792/fragmenstein-0.6.2.tar.gz#sha256=167e96cb1182bd30a948ff6b919d05bb7f9cc04325d5d2ce842d9660fed5fb30 (from https://pypi.org/simple/fragmenstein/), version: 0.6.2
2022-04-26T08:53:50,015   Found link https://files.pythonhosted.org/packages/d0/5c/78b74cb56d283448857aab8e31dc7593ea40c278367cfddb5d8823f88af1/fragmenstein-0.6.3.tar.gz#sha256=dd8414e3152cc72855bfc85a886b41d7037002a96e2785716194cda67bad0cb6 (from https://pypi.org/simple/fragmenstein/), version: 0.6.3
2022-04-26T08:53:50,016   Found link https://files.pythonhosted.org/packages/ef/53/306ce7438a57b764d88968982f6a5dc9b4c69e83bd23a20d857040223368/Fragmenstein-0.6.4.tar.gz#sha256=f46068418a01abdca48d58e27071f2ae5bcd34f66de527e833e1040d492ca86f (from https://pypi.org/simple/fragmenstein/), version: 0.6.4
2022-04-26T08:53:50,017   Found link https://files.pythonhosted.org/packages/7a/16/dd9b834215d9b986894c991e28cb9111691401b52686f2f8d3b4503cd25e/Fragmenstein-0.6.5.tar.gz#sha256=f15566be1726c42db0bf0947a4fdb5ac60668cf78181354421289646df400b81 (from https://pypi.org/simple/fragmenstein/), version: 0.6.5
2022-04-26T08:53:50,018   Found link https://files.pythonhosted.org/packages/5c/e2/d2ca713c7a98e86580ca55c8cea3bd011aab570829eb7306bb76471f41f5/Fragmenstein-0.6.7.tar.gz#sha256=7bc5579fba97a279e6a7714de296448d12a70b1f4bf0c078318f4ee77d74c6f5 (from https://pypi.org/simple/fragmenstein/), version: 0.6.7
2022-04-26T08:53:50,018   Found link https://files.pythonhosted.org/packages/d3/de/18bb471456c5f660642b8df218f03631149c30947995eb4896b7fca4752d/Fragmenstein-0.6.8.tar.gz#sha256=485807bc0934f4d6beae6947b67c34f64a24f7a0f39a977dbc5ac7949d08fe89 (from https://pypi.org/simple/fragmenstein/), version: 0.6.8
2022-04-26T08:53:50,019   Found link https://files.pythonhosted.org/packages/b3/35/e2afdf14377e64b1a6104d704292b07fc1ce528912a722549c115eb036ad/Fragmenstein-0.6.10.tar.gz#sha256=7b03c6bf51659e874cbcbce8b5ca74cbc60104d3cf0e54373bf0ef66630448f0 (from https://pypi.org/simple/fragmenstein/), version: 0.6.10
2022-04-26T08:53:50,020   Found link https://files.pythonhosted.org/packages/9e/6a/21efc4f6bbb3e74ad3b267e1a2cb6e3f4479d1e6b318412332c520627b0b/Fragmenstein-0.6.11.tar.gz#sha256=91f64dff01c4eb995d14c33bb894d409f2abbf02115bc877b068b805ae178c5c (from https://pypi.org/simple/fragmenstein/), version: 0.6.11
2022-04-26T08:53:50,020   Found link https://files.pythonhosted.org/packages/ec/eb/4ecf6bcb6bd3cdc91dfee2717faac7550f45213f3afec7604958ccff53b2/Fragmenstein-0.6.12.tar.gz#sha256=cde4a6914906b4681bc62c6f6d977fc5a3b89f7bf35e584f5240aa353472bbe1 (from https://pypi.org/simple/fragmenstein/), version: 0.6.12
2022-04-26T08:53:50,021   Found link https://files.pythonhosted.org/packages/b5/04/5cb14872a938ee9efb0bdaf1697971a8ee0df33352f2a876815e7e5d1097/Fragmenstein-0.6.13.tar.gz#sha256=2b47c16b617488d88bbe1bb830ea3e793985fa20118302917f1b48b5bee86469 (from https://pypi.org/simple/fragmenstein/), version: 0.6.13
2022-04-26T08:53:50,022   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/25/00/210052b430d3fbc780d0d1df4c6d9935ae6ff2fba311d2a9d9f6fed99b20/Fragmenstein-0.7.0-py3-none-any.whl#sha256=bbe5b132912671d64f69f40d005940398112294ac0d04c8a4bb3a5a779358eaf (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,023   Found link https://files.pythonhosted.org/packages/11/4c/01b1715bc6eb588b1f0e00f1767005d576f2b54d6942a84dc12f9b692bb4/Fragmenstein-0.7.0.tar.gz#sha256=4153941208741efb84868bec89bf249be832c76d7ce70ba8abd3ad4a6363be0c (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.7.0
2022-04-26T08:53:50,024   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/44/3d/2ba966319e572f6b6ef2652c423d315e267c08f3f03cc0a7c50011500875/Fragmenstein-0.7.1-py3-none-any.whl#sha256=a93a2f8b12368ded8b3efe610b99c0033dea2a5e0632b05d95e354a4b0b74b5a (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,026   Found link https://files.pythonhosted.org/packages/5a/4d/e64932f56002a675de1b9a535be867b49a75df347c8cc1c7e5253dffa285/Fragmenstein-0.7.1.tar.gz#sha256=f19db90291e184b6b257a546fbb6fa0aa206c34b4bba5973d6a127a05d55687f (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.7.1
2022-04-26T08:53:50,026   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/56/ed/65ef6ff509828c1c86d7e7ef81a581cfc90705478fd69482b0014d8886b1/Fragmenstein-0.7.2-py3-none-any.whl#sha256=e348409a0160e4d662274258d996deea4bad252b9f1d70ad397e36b42befcb26 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,028   Found link https://files.pythonhosted.org/packages/58/37/3c9439f4ee48f69968e170f2c3023a5f81e6483655d31a28bfa9a0e07c18/Fragmenstein-0.7.2.tar.gz#sha256=069e883277010adf5d61a2ecc5e4bd9a8d2cc27c0109f96323caeb71dedbcf4f (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.7.2
2022-04-26T08:53:50,028   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/0f/b2/422c46b9d0b33b3cc8467f86ff3d46e880c5dee109fe00f6221e2b556cad/Fragmenstein-0.7.3-py3-none-any.whl#sha256=ead04cfe6ec5f0879bf502b07c03fcddbd7b69ab8fe816af5d13303baabd8f93 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,030   Found link https://files.pythonhosted.org/packages/7f/86/5ca894e7c08f147579ed1f159d2a09941802ce6589aab3da8410d8a2e0ac/Fragmenstein-0.7.3.tar.gz#sha256=67b196f49733c5ae5dad1f1b005271fd5a58f144812317d5532aaf5397c6cf60 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.7.3
2022-04-26T08:53:50,031   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/35/df/3f58fda83f212079dd708df34906c239841d0af3131daf9c98f8550a5c14/Fragmenstein-0.8.0-py3-none-any.whl#sha256=4b0e1446e2a264c7649ac08d03afada8649003d9d81ca00fc56392aaac5a1f07 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,032   Found link https://files.pythonhosted.org/packages/bd/b0/337883d75334d76ce4cce2a834ceee08ea7e46fc6c1f160c3eb6ba55f77a/Fragmenstein-0.8.0.tar.gz#sha256=976c8bca16abb3a720d4a8180069be5c0ea6f539a2004e06c0428b94a14f6934 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.8.0
2022-04-26T08:53:50,033   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/26/55/f5f767f86ec7c66c3dfda131302a463cadf265c0de986d47ab5765d0c1c8/Fragmenstein-0.8.2-py3-none-any.whl#sha256=58edab1f23482b85bbe543b3b92a7453ec194c776d70926c7c9525f4ce3544b9 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,034   Found link https://files.pythonhosted.org/packages/78/e0/1e59d3ec111917b44294f3f63065ca9ad1d6de904d225c8fcc17fa5cd6fb/Fragmenstein-0.8.2.tar.gz#sha256=cb4450ff644186d5a8a53902182d3168cc76425969d8dbfa2656fddff797eac4 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.8.2
2022-04-26T08:53:50,035   Skipping link: No binaries permitted for fragmenstein: https://files.pythonhosted.org/packages/3f/65/156f077136417021abf9182903223d4d38b93e97ffe5a5f672442eac9463/Fragmenstein-0.8.3-py3-none-any.whl#sha256=4f1ee1794d38cec64ed0ae9ae59e48c2e71935f2add0365ccb9bcbb12161f460 (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,036   Found link https://files.pythonhosted.org/packages/51/a7/6dfbcde97c453cfed49079b98d803eb19bbf68d12484d1a69507d20ac552/Fragmenstein-0.8.3.tar.gz#sha256=a1841ccbab202784cf54dc698db7e9c5cde2bba58989f941dea916f12a9ff24c (from https://pypi.org/simple/fragmenstein/) (requires-python:>=3.7), version: 0.8.3
2022-04-26T08:53:50,037 Fetching project page and analyzing links: https://www.piwheels.org/simple/fragmenstein/
2022-04-26T08:53:50,038 Getting page https://www.piwheels.org/simple/fragmenstein/
2022-04-26T08:53:50,040 Found index url https://www.piwheels.org/simple
2022-04-26T08:53:50,298   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.8.2-py3-none-any.whl#sha256=45761fd95ada651d70b425bc35c3a4002f42c48095aa151a53f6959fcd48c7ea (from https://www.piwheels.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,299   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.8.0-py3-none-any.whl#sha256=4157c6f0381e1288b3d6138719a523107c89ce0ef5621ca6ae56c9822d55b534 (from https://www.piwheels.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,299   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.7.3-py3-none-any.whl#sha256=0dcf213e6daa241647478c7e40ec6927c9f072223d7885d82ff56c8f52266c42 (from https://www.piwheels.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,300   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.7.2-py3-none-any.whl#sha256=66a5aab11512572c6357da08ac01f2aa9b6cb51a74d92aa90d5fbd45531a9579 (from https://www.piwheels.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,300   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.7.1-py3-none-any.whl#sha256=9f270113d8bb683b4164679113f2d2b2283fea38f10c185b21f155aeca33e0d8 (from https://www.piwheels.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,301   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.7.0-py3-none-any.whl#sha256=328c51627b8ab2d02cf0c92eb74b13ef730707c391acc56ebe26fe08ac8eaa47 (from https://www.piwheels.org/simple/fragmenstein/) (requires-python:>=3.7)
2022-04-26T08:53:50,301   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.13-py3-none-any.whl#sha256=53d7b38e2f2ab6e8035f55c00b3c26e642d5e4a40e713e43d25fcfa981ead340 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,302   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.12-py3-none-any.whl#sha256=6dd68b8903243a62c28e83b5a811113aeaf979f42b78117ed17359befe3933b8 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,303   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.11-py3-none-any.whl#sha256=d420f2d7bb13d0486d2df0e68413c577ccb6f739f6599927f6a8fda21f6b23e9 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,303   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.10-py3-none-any.whl#sha256=c81a4ce4083e3c2949820ec4f9a2052f91d107ee5803625c1395eb37662c3f65 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,304   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.8-py3-none-any.whl#sha256=105c4f74d89ac129d6ce2c540b954b0726b76789048aa6885e9fae20ad97c6f1 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,304   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.7-py3-none-any.whl#sha256=63fbcc65615bb01dbf461e7bada7ae323d78d0db76c04876bc510d2b449c65c8 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,305   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.5-py3-none-any.whl#sha256=dc7956be0681793a1b114b9314d939e844ceefbe73c947332ed41160f87f4fb7 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,305   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.4-py3-none-any.whl#sha256=fd2ae6f3f195d72cd1a89a6831ee0a23ab5edecc899e5cecef0663e5da21b3ed (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,306   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.3-py3-none-any.whl#sha256=44918733ba0b1d6cd8179b2525562e84b5e8620385d5c36ad304d8ef005ddb9f (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,306   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.2-py3-none-any.whl#sha256=06157e7aa034419ec24c936b586fee8801b66cd32017233c170a9e67aee89f93 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,307   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.1-py3-none-any.whl#sha256=0a434b2df199f1664c61f14d7307e316f5e1bd615eb3995fe740fa9b43567360 (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,307   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6-py3-none-any.whl#sha256=a066df758898ce62bb498e9000e9e60772360c4fba8b4c9b687e0fc1e535a5ca (from https://www.piwheels.org/simple/fragmenstein/)
2022-04-26T08:53:50,308 Skipping link: not a file: https://www.piwheels.org/simple/fragmenstein/
2022-04-26T08:53:50,308 Skipping link: not a file: https://pypi.org/simple/fragmenstein/
2022-04-26T08:53:50,350 Given no hashes to check 1 links for project 'fragmenstein': discarding no candidates
2022-04-26T08:53:50,381 Collecting fragmenstein==0.8.3
2022-04-26T08:53:50,386   Created temporary directory: /tmp/pip-unpack-a22c7ebt
2022-04-26T08:53:50,669   Downloading Fragmenstein-0.8.3.tar.gz (301 kB)
2022-04-26T08:53:52,408   Added fragmenstein==0.8.3 from https://files.pythonhosted.org/packages/51/a7/6dfbcde97c453cfed49079b98d803eb19bbf68d12484d1a69507d20ac552/Fragmenstein-0.8.3.tar.gz#sha256=a1841ccbab202784cf54dc698db7e9c5cde2bba58989f941dea916f12a9ff24c to build tracker '/tmp/pip-req-tracker-ilkr1h4w'
2022-04-26T08:53:52,410   Running setup.py (path:/tmp/pip-wheel-h47ealy8/fragmenstein_0fcdbff4964f4005ba9efb718833d779/setup.py) egg_info for package fragmenstein
2022-04-26T08:53:52,411   Created temporary directory: /tmp/pip-pip-egg-info-b2dv6rog
2022-04-26T08:53:52,412   Preparing metadata (setup.py): started
2022-04-26T08:53:52,414   Running command python setup.py egg_info
2022-04-26T08:53:54,408   running egg_info
2022-04-26T08:53:54,412   creating /tmp/pip-pip-egg-info-b2dv6rog/Fragmenstein.egg-info
2022-04-26T08:53:54,427   writing manifest file '/tmp/pip-pip-egg-info-b2dv6rog/Fragmenstein.egg-info/SOURCES.txt'
2022-04-26T08:53:54,664   writing manifest file '/tmp/pip-pip-egg-info-b2dv6rog/Fragmenstein.egg-info/SOURCES.txt'
2022-04-26T08:53:54,667   /tmp/pip-wheel-h47ealy8/fragmenstein_0fcdbff4964f4005ba9efb718833d779/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2022-04-26T08:53:54,668     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2022-04-26T08:53:54,668   /tmp/pip-wheel-h47ealy8/fragmenstein_0fcdbff4964f4005ba9efb718833d779/setup.py:37: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2022-04-26T08:53:54,669     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2022-04-26T08:53:54,792   Preparing metadata (setup.py): finished with status 'done'
2022-04-26T08:53:54,802   Source in /tmp/pip-wheel-h47ealy8/fragmenstein_0fcdbff4964f4005ba9efb718833d779 has version 0.8.3, which satisfies requirement fragmenstein==0.8.3 from https://files.pythonhosted.org/packages/51/a7/6dfbcde97c453cfed49079b98d803eb19bbf68d12484d1a69507d20ac552/Fragmenstein-0.8.3.tar.gz#sha256=a1841ccbab202784cf54dc698db7e9c5cde2bba58989f941dea916f12a9ff24c
2022-04-26T08:53:54,804   Removed fragmenstein==0.8.3 from https://files.pythonhosted.org/packages/51/a7/6dfbcde97c453cfed49079b98d803eb19bbf68d12484d1a69507d20ac552/Fragmenstein-0.8.3.tar.gz#sha256=a1841ccbab202784cf54dc698db7e9c5cde2bba58989f941dea916f12a9ff24c from build tracker '/tmp/pip-req-tracker-ilkr1h4w'
2022-04-26T08:53:54,817 Created temporary directory: /tmp/pip-unpack-2kfp7s7w
2022-04-26T08:53:54,818 Building wheels for collected packages: fragmenstein
2022-04-26T08:53:54,827   Created temporary directory: /tmp/pip-wheel-o1p9s32w
2022-04-26T08:53:54,828   Building wheel for fragmenstein (setup.py): started
2022-04-26T08:53:54,830   Destination directory: /tmp/pip-wheel-o1p9s32w
2022-04-26T08:53:54,831   Running command python setup.py bdist_wheel
2022-04-26T08:53:56,308   /tmp/pip-wheel-h47ealy8/fragmenstein_0fcdbff4964f4005ba9efb718833d779/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2022-04-26T08:53:56,309     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2022-04-26T08:53:56,309   /tmp/pip-wheel-h47ealy8/fragmenstein_0fcdbff4964f4005ba9efb718833d779/setup.py:37: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2022-04-26T08:53:56,310     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2022-04-26T08:53:56,840   running bdist_wheel
2022-04-26T08:53:56,849   running build
2022-04-26T08:53:56,850   running build_py
2022-04-26T08:53:56,858   creating build
2022-04-26T08:53:56,859   creating build/lib
2022-04-26T08:53:56,860   creating build/lib/fragmenstein
2022-04-26T08:53:56,862   copying fragmenstein/m_rmsd.py -> build/lib/fragmenstein
2022-04-26T08:53:56,867   copying fragmenstein/__init__.py -> build/lib/fragmenstein
2022-04-26T08:53:56,870   copying fragmenstein/branding.py -> build/lib/fragmenstein
2022-04-26T08:53:56,875   creating build/lib/fragmenstein/cli
2022-04-26T08:53:56,876   copying fragmenstein/cli/__init__.py -> build/lib/fragmenstein/cli
2022-04-26T08:53:56,882   creating build/lib/fragmenstein/victor
2022-04-26T08:53:56,884   copying fragmenstein/victor/_victor_base.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,888   copying fragmenstein/victor/_victor_safety.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,891   copying fragmenstein/victor/_victor_validate.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,894   copying fragmenstein/victor/_victor_overridables.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,897   copying fragmenstein/victor/_victor_combine.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,901   copying fragmenstein/victor/__init__.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,906   copying fragmenstein/victor/_victor_igor.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,910   copying fragmenstein/victor/_victor_place.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,914   copying fragmenstein/victor/_victor_journal.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,918   copying fragmenstein/victor/_victor_store.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,921   copying fragmenstein/victor/_loggerwriter.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,925   copying fragmenstein/victor/_victor_plonk.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,928   copying fragmenstein/victor/_victor_common.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,933   copying fragmenstein/victor/minimalPDB.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,937   copying fragmenstein/victor/_victor_utils.py -> build/lib/fragmenstein/victor
2022-04-26T08:53:56,943   creating build/lib/fragmenstein/multivictor
2022-04-26T08:53:56,945   copying fragmenstein/multivictor/__init__.py -> build/lib/fragmenstein/multivictor
2022-04-26T08:53:56,948   copying fragmenstein/multivictor/multivictor.py -> build/lib/fragmenstein/multivictor
2022-04-26T08:53:56,953   creating build/lib/fragmenstein/mac1
2022-04-26T08:53:56,954   copying fragmenstein/mac1/__init__.py -> build/lib/fragmenstein/mac1
2022-04-26T08:53:56,960   creating build/lib/fragmenstein/monster
2022-04-26T08:53:56,962   copying fragmenstein/monster/_modification_logging.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,965   copying fragmenstein/monster/_communal.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,970   copying fragmenstein/monster/_base.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,974   copying fragmenstein/monster/__init__.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,977   copying fragmenstein/monster/_blend_place.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,983   copying fragmenstein/monster/bond_provenance.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,986   copying fragmenstein/monster/_place.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,989   copying fragmenstein/monster/positional_mapping.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,993   copying fragmenstein/monster/_collapse_ring.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:56,999   copying fragmenstein/monster/_utility.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:57,004   copying fragmenstein/monster/_combine.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:57,007   copying fragmenstein/monster/_join_neighboring.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:57,011   copying fragmenstein/monster/_merge.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:57,015   copying fragmenstein/monster/unmerge_mapper.py -> build/lib/fragmenstein/monster
2022-04-26T08:53:57,021   creating build/lib/fragmenstein/igor
2022-04-26T08:53:57,023   copying fragmenstein/igor/_igor_utils.py -> build/lib/fragmenstein/igor
2022-04-26T08:53:57,027   copying fragmenstein/igor/__init__.py -> build/lib/fragmenstein/igor
2022-04-26T08:53:57,031   copying fragmenstein/igor/_igor_base.py -> build/lib/fragmenstein/igor
2022-04-26T08:53:57,034   copying fragmenstein/igor/pyrosetta_import.py -> build/lib/fragmenstein/igor
2022-04-26T08:53:57,038   copying fragmenstein/igor/_igor_init.py -> build/lib/fragmenstein/igor
2022-04-26T08:53:57,041   copying fragmenstein/igor/_igor_min.py -> build/lib/fragmenstein/igor
2022-04-26T08:53:57,048   creating build/lib/fragmenstein/laboratory
2022-04-26T08:53:57,049   copying fragmenstein/laboratory/_base.py -> build/lib/fragmenstein/laboratory
2022-04-26T08:53:57,053   copying fragmenstein/laboratory/__init__.py -> build/lib/fragmenstein/laboratory
2022-04-26T08:53:57,057   copying fragmenstein/laboratory/_place.py -> build/lib/fragmenstein/laboratory
2022-04-26T08:53:57,060   copying fragmenstein/laboratory/_combine.py -> build/lib/fragmenstein/laboratory
2022-04-26T08:53:57,065   creating build/lib/fragmenstein/walton
2022-04-26T08:53:57,067   copying fragmenstein/walton/_base.py -> build/lib/fragmenstein/walton
2022-04-26T08:53:57,070   copying fragmenstein/walton/_advmoves.py -> build/lib/fragmenstein/walton
2022-04-26T08:53:57,074   copying fragmenstein/walton/__init__.py -> build/lib/fragmenstein/walton
2022-04-26T08:53:57,077   copying fragmenstein/walton/_art.py -> build/lib/fragmenstein/walton
2022-04-26T08:53:57,080   copying fragmenstein/walton/_movements.py -> build/lib/fragmenstein/walton
2022-04-26T08:53:57,084   copying fragmenstein/walton/_polygon.py -> build/lib/fragmenstein/walton
2022-04-26T08:53:57,089   creating build/lib/fragmenstein/mpro
2022-04-26T08:53:57,090   copying fragmenstein/mpro/__init__.py -> build/lib/fragmenstein/mpro
2022-04-26T08:53:57,096   creating build/lib/fragmenstein/mpro/data
2022-04-26T08:53:57,097   copying fragmenstein/mpro/data/__init__.py -> build/lib/fragmenstein/mpro/data
2022-04-26T08:53:57,105   creating build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,106   copying fragmenstein/mpro/data/hit_mols/__init__.py -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,108   running egg_info
2022-04-26T08:53:57,507   writing manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2022-04-26T08:53:57,609   copying fragmenstein/mpro/data/template.pdb -> build/lib/fragmenstein/mpro/data
2022-04-26T08:53:57,632   copying fragmenstein/mpro/data/hit_mols/Mpro-6lze.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,637   copying fragmenstein/mpro/data/hit_mols/Mpro-6m0k.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,641   copying fragmenstein/mpro/data/hit_mols/Mpro-6m2n.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,645   copying fragmenstein/mpro/data/hit_mols/Mpro-6w63.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,649   copying fragmenstein/mpro/data/hit_mols/Mpro-6wnp.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,653   copying fragmenstein/mpro/data/hit_mols/Mpro-6wtj.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,657   copying fragmenstein/mpro/data/hit_mols/Mpro-6wtk.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,661   copying fragmenstein/mpro/data/hit_mols/Mpro-6wtt.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,665   copying fragmenstein/mpro/data/hit_mols/Mpro-6xa4.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,669   copying fragmenstein/mpro/data/hit_mols/Mpro-6xb0.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,673   copying fragmenstein/mpro/data/hit_mols/Mpro-6xb1.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,677   copying fragmenstein/mpro/data/hit_mols/Mpro-6xb2.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,681   copying fragmenstein/mpro/data/hit_mols/Mpro-6xbg.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,684   copying fragmenstein/mpro/data/hit_mols/Mpro-6xbh.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,688   copying fragmenstein/mpro/data/hit_mols/Mpro-6xbi.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,692   copying fragmenstein/mpro/data/hit_mols/Mpro-6xch.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,696   copying fragmenstein/mpro/data/hit_mols/Mpro-6xfn.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,700   copying fragmenstein/mpro/data/hit_mols/Mpro-6xhm.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,704   copying fragmenstein/mpro/data/hit_mols/Mpro-6xkf.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,708   copying fragmenstein/mpro/data/hit_mols/Mpro-6xmk.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,712   copying fragmenstein/mpro/data/hit_mols/Mpro-6xqs.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,717   copying fragmenstein/mpro/data/hit_mols/Mpro-6xqt.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,722   copying fragmenstein/mpro/data/hit_mols/Mpro-6xqu.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,726   copying fragmenstein/mpro/data/hit_mols/Mpro-6xr3.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,730   copying fragmenstein/mpro/data/hit_mols/Mpro-6y2f.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,733   copying fragmenstein/mpro/data/hit_mols/Mpro-6y2g.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,737   copying fragmenstein/mpro/data/hit_mols/Mpro-6ynq.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,741   copying fragmenstein/mpro/data/hit_mols/Mpro-6yt8.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,745   copying fragmenstein/mpro/data/hit_mols/Mpro-6yvf.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,749   copying fragmenstein/mpro/data/hit_mols/Mpro-6yz6.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,753   copying fragmenstein/mpro/data/hit_mols/Mpro-6zrt.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,758   copying fragmenstein/mpro/data/hit_mols/Mpro-6zru.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,761   copying fragmenstein/mpro/data/hit_mols/Mpro-7aku.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,765   copying fragmenstein/mpro/data/hit_mols/Mpro-7bqy.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,769   copying fragmenstein/mpro/data/hit_mols/Mpro-7brp.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,773   copying fragmenstein/mpro/data/hit_mols/Mpro-7buy.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,777   copying fragmenstein/mpro/data/hit_mols/Mpro-7c6s.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,781   copying fragmenstein/mpro/data/hit_mols/Mpro-7c6u.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,784   copying fragmenstein/mpro/data/hit_mols/Mpro-7c7p.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,788   copying fragmenstein/mpro/data/hit_mols/Mpro-7c8b.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,792   copying fragmenstein/mpro/data/hit_mols/Mpro-7c8r.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,796   copying fragmenstein/mpro/data/hit_mols/Mpro-7c8t.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,800   copying fragmenstein/mpro/data/hit_mols/Mpro-7c8u.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,803   copying fragmenstein/mpro/data/hit_mols/Mpro-7cbt.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,807   copying fragmenstein/mpro/data/hit_mols/Mpro-7com.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,811   copying fragmenstein/mpro/data/hit_mols/Mpro-7cx9.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,815   copying fragmenstein/mpro/data/hit_mols/Mpro-7d1m.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,818   copying fragmenstein/mpro/data/hit_mols/Mpro-7d1o.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,823   copying fragmenstein/mpro/data/hit_mols/Mpro-7d3i.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,827   copying fragmenstein/mpro/data/hit_mols/Mpro-7jkv.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,831   copying fragmenstein/mpro/data/hit_mols/Mpro-7jr4.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,835   copying fragmenstein/mpro/data/hit_mols/Mpro-7ju7.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,839   copying fragmenstein/mpro/data/hit_mols/Mpro-7jyc.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,843   copying fragmenstein/mpro/data/hit_mols/Mpro-7k40.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,847   copying fragmenstein/mpro/data/hit_mols/Mpro-7k6d.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,851   copying fragmenstein/mpro/data/hit_mols/Mpro-7k6e.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,856   copying fragmenstein/mpro/data/hit_mols/Mpro-7kfj.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,860   copying fragmenstein/mpro/data/hit_mols/Mpro-x0072.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,864   copying fragmenstein/mpro/data/hit_mols/Mpro-x0104.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,867   copying fragmenstein/mpro/data/hit_mols/Mpro-x0107.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,871   copying fragmenstein/mpro/data/hit_mols/Mpro-x0161.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,875   copying fragmenstein/mpro/data/hit_mols/Mpro-x0165.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,880   copying fragmenstein/mpro/data/hit_mols/Mpro-x0177.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,884   copying fragmenstein/mpro/data/hit_mols/Mpro-x0194.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,888   copying fragmenstein/mpro/data/hit_mols/Mpro-x0195.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,891   copying fragmenstein/mpro/data/hit_mols/Mpro-x0305.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,895   copying fragmenstein/mpro/data/hit_mols/Mpro-x0336.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,899   copying fragmenstein/mpro/data/hit_mols/Mpro-x0350.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,903   copying fragmenstein/mpro/data/hit_mols/Mpro-x0354.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,907   copying fragmenstein/mpro/data/hit_mols/Mpro-x0376.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,911   copying fragmenstein/mpro/data/hit_mols/Mpro-x0387.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,915   copying fragmenstein/mpro/data/hit_mols/Mpro-x0390.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,919   copying fragmenstein/mpro/data/hit_mols/Mpro-x0395.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,923   copying fragmenstein/mpro/data/hit_mols/Mpro-x0397.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:57,927   copying fragmenstein/mpro/data/hit_mols/Mpro-x0398.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,709   copying fragmenstein/mpro/data/hit_mols/Mpro-x12073.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,712   copying fragmenstein/mpro/data/hit_mols/Mpro-x12080.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,716   copying fragmenstein/mpro/data/hit_mols/Mpro-x1226.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,723   copying fragmenstein/mpro/data/hit_mols/Mpro-x1235.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,726   copying fragmenstein/mpro/data/hit_mols/Mpro-x1237.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,730   copying fragmenstein/mpro/data/hit_mols/Mpro-x1249.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,734   copying fragmenstein/mpro/data/hit_mols/Mpro-x1308.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,737   copying fragmenstein/mpro/data/hit_mols/Mpro-x1311.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,760   copying fragmenstein/mpro/data/hit_mols/Mpro-x1374.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,764   copying fragmenstein/mpro/data/hit_mols/Mpro-x1375.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,767   copying fragmenstein/mpro/data/hit_mols/Mpro-x1380.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,789   copying fragmenstein/mpro/data/hit_mols/Mpro-x1402.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,793   copying fragmenstein/mpro/data/hit_mols/Mpro-x1412.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,797   copying fragmenstein/mpro/data/hit_mols/Mpro-x1418.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,804   copying fragmenstein/mpro/data/hit_mols/Mpro-x1458.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,808   copying fragmenstein/mpro/data/hit_mols/Mpro-x1478.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,811   copying fragmenstein/mpro/data/hit_mols/Mpro-x1493.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,815   copying fragmenstein/mpro/data/hit_mols/Mpro-x2052.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,819   copying fragmenstein/mpro/data/hit_mols/Mpro-x2097.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,823   copying fragmenstein/mpro/data/hit_mols/Mpro-x2119.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,826   copying fragmenstein/mpro/data/hit_mols/Mpro-x2193.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,830   copying fragmenstein/mpro/data/hit_mols/Mpro-x2540.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,834   copying fragmenstein/mpro/data/hit_mols/Mpro-x2562.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,837   copying fragmenstein/mpro/data/hit_mols/Mpro-x2563.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,845   copying fragmenstein/mpro/data/hit_mols/Mpro-x2572.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,852   copying fragmenstein/mpro/data/hit_mols/Mpro-x2600.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,878   copying fragmenstein/mpro/data/hit_mols/Mpro-x2703.mol -> build/lib/fragmenstein/mpro/data/hit_mols
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2022-04-26T08:53:58,966   copying fragmenstein/mpro/data/hit_mols/Mpro-x3324.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,970   copying fragmenstein/mpro/data/hit_mols/Mpro-x3325.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,974   copying fragmenstein/mpro/data/hit_mols/Mpro-x3333.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,977   copying fragmenstein/mpro/data/hit_mols/Mpro-x3348.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,981   copying fragmenstein/mpro/data/hit_mols/Mpro-x3351.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,985   copying fragmenstein/mpro/data/hit_mols/Mpro-x3359.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:58,989   copying fragmenstein/mpro/data/hit_mols/Mpro-x3366.mol -> build/lib/fragmenstein/mpro/data/hit_mols
2022-04-26T08:53:59,024   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-04-26T08:53:59,024     setuptools.SetuptoolsDeprecationWarning,
2022-04-26T08:53:59,028   running install
2022-04-26T08:53:59,091   running install_lib
2022-04-26T08:53:59,097   creating build/bdist.linux-armv7l
2022-04-26T08:53:59,098   creating build/bdist.linux-armv7l/wheel
2022-04-26T08:53:59,101   creating build/bdist.linux-armv7l/wheel/fragmenstein
2022-04-26T08:53:59,105   creating build/bdist.linux-armv7l/wheel/fragmenstein/cli
2022-04-26T08:53:59,113   creating build/bdist.linux-armv7l/wheel/fragmenstein/victor
2022-04-26T08:53:59,179   creating build/bdist.linux-armv7l/wheel/fragmenstein/multivictor
2022-04-26T08:53:59,198   creating build/bdist.linux-armv7l/wheel/fragmenstein/mac1
2022-04-26T08:53:59,205   creating build/bdist.linux-armv7l/wheel/fragmenstein/monster
2022-04-26T08:53:59,270   creating build/bdist.linux-armv7l/wheel/fragmenstein/igor
2022-04-26T08:53:59,295   creating build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2022-04-26T08:53:59,316   creating build/bdist.linux-armv7l/wheel/fragmenstein/walton
2022-04-26T08:53:59,341   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro
2022-04-26T08:53:59,348   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro/data
2022-04-26T08:53:59,366   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro/data/hit_mols
2022-04-26T08:54:00,517   running install_egg_info
2022-04-26T08:54:00,534   Copying Fragmenstein.egg-info to build/bdist.linux-armv7l/wheel/Fragmenstein-0.8.3-py3.7.egg-info
2022-04-26T08:54:00,558   running install_scripts
2022-04-26T08:54:02,299   Building wheel for fragmenstein (setup.py): finished with status 'done'
2022-04-26T08:54:02,319   Created wheel for fragmenstein: filename=Fragmenstein-0.8.3-py3-none-any.whl size=428690 sha256=882b97c6383859c8bdfad9b7b2cc3b34d0c749a79841c3154dbc04e7bdff3609
2022-04-26T08:54:02,321   Stored in directory: /tmp/pip-ephem-wheel-cache-0zf0f5xq/wheels/2a/c6/f8/3ae58b3ae0c7d85f3c986f862663cd2b663e8204b615ffd636
2022-04-26T08:54:02,378 Successfully built fragmenstein
2022-04-26T08:54:02,415 Removed build tracker: '/tmp/pip-req-tracker-ilkr1h4w'