2022-04-27T15:27:00,684 Created temporary directory: /tmp/pip-ephem-wheel-cache-tedkap5g 2022-04-27T15:27:00,690 Created temporary directory: /tmp/pip-req-tracker-kbglcs2e 2022-04-27T15:27:00,691 Initialized build tracking at /tmp/pip-req-tracker-kbglcs2e 2022-04-27T15:27:00,691 Created build tracker: /tmp/pip-req-tracker-kbglcs2e 2022-04-27T15:27:00,691 Entered build tracker: /tmp/pip-req-tracker-kbglcs2e 2022-04-27T15:27:00,693 Created temporary directory: /tmp/pip-wheel-r878vkc1 2022-04-27T15:27:00,752 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-04-27T15:27:00,756 2 location(s) to search for versions of medspacy-pna: 2022-04-27T15:27:00,756 * https://pypi.org/simple/medspacy-pna/ 2022-04-27T15:27:00,756 * https://www.piwheels.org/simple/medspacy-pna/ 2022-04-27T15:27:00,757 Fetching project page and analyzing links: https://pypi.org/simple/medspacy-pna/ 2022-04-27T15:27:00,759 Getting page https://pypi.org/simple/medspacy-pna/ 2022-04-27T15:27:00,763 Found index url https://pypi.org/simple 2022-04-27T15:27:01,076 Found link https://files.pythonhosted.org/packages/6c/3e/2a62b1fdc5a9740c01f13b704e4a6b5f56d6db11b8e48d9a89bdb77cedd7/medspacy_pna-0.0.0.1.tar.gz#sha256=aebe6361466d42a9f69bf968fb5240290e31a86ca1929c0aeb7705527902062a (from https://pypi.org/simple/medspacy-pna/), version: 0.0.0.1 2022-04-27T15:27:01,077 Found link https://files.pythonhosted.org/packages/ab/9c/b56a1623cfd5a98c114b270967e9dd155fae7be53303ee1542c52cf6f886/medspacy_pna-0.0.0.2.tar.gz#sha256=30ff6e9a109a19d541b61ac1337066cc12dd8463a3f9dc4bc39b7b44a90e396d (from https://pypi.org/simple/medspacy-pna/), version: 0.0.0.2 2022-04-27T15:27:01,078 Found link https://files.pythonhosted.org/packages/71/86/f87ff185dbb98ba8ecd8c06689a7dcffc060309b570470b5d06ae60db5c5/medspacy_pna-0.0.0.3.tar.gz#sha256=cbdb429c24310def92f0b795ddee56ea105c87f63631346004dc24c893ded641 (from https://pypi.org/simple/medspacy-pna/), version: 0.0.0.3 2022-04-27T15:27:01,079 Fetching project page and analyzing links: https://www.piwheels.org/simple/medspacy-pna/ 2022-04-27T15:27:01,080 Getting page https://www.piwheels.org/simple/medspacy-pna/ 2022-04-27T15:27:01,082 Found index url https://www.piwheels.org/simple 2022-04-27T15:27:01,304 Skipping link: No binaries permitted for medspacy-pna: https://www.piwheels.org/simple/medspacy-pna/medspacy_pna-0.0.0.2-py3-none-any.whl#sha256=b68e17f7caf387e64cbc28ea9dc3cb4edf9b1623eb1cbf9d29b2c9c60d3ed41d (from https://www.piwheels.org/simple/medspacy-pna/) 2022-04-27T15:27:01,305 Skipping link: No binaries permitted for medspacy-pna: https://www.piwheels.org/simple/medspacy-pna/medspacy_pna-0.0.0.1-py3-none-any.whl#sha256=af0bec9ffc870c51c9c2ecfee260dde647c06151a20a5755bfb613e995cfab15 (from https://www.piwheels.org/simple/medspacy-pna/) 2022-04-27T15:27:01,334 Given no hashes to check 1 links for project 'medspacy-pna': discarding no candidates 2022-04-27T15:27:01,366 Collecting medspacy-pna==0.0.0.3 2022-04-27T15:27:01,369 Created temporary directory: /tmp/pip-unpack-7i5qamak 2022-04-27T15:27:01,615 Downloading medspacy_pna-0.0.0.3.tar.gz (58 kB) 2022-04-27T15:27:02,282 Added medspacy-pna==0.0.0.3 from https://files.pythonhosted.org/packages/71/86/f87ff185dbb98ba8ecd8c06689a7dcffc060309b570470b5d06ae60db5c5/medspacy_pna-0.0.0.3.tar.gz#sha256=cbdb429c24310def92f0b795ddee56ea105c87f63631346004dc24c893ded641 to build tracker '/tmp/pip-req-tracker-kbglcs2e' 2022-04-27T15:27:02,284 Running setup.py (path:/tmp/pip-wheel-r878vkc1/medspacy-pna_efa222467970415c85fce46b1a924d95/setup.py) egg_info for package medspacy-pna 2022-04-27T15:27:02,286 Created temporary directory: /tmp/pip-pip-egg-info-n0hdzibg 2022-04-27T15:27:02,287 Running command python setup.py egg_info 2022-04-27T15:27:04,412 running egg_info 2022-04-27T15:27:04,418 creating /tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info 2022-04-27T15:27:04,421 writing requirements to /tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/requires.txt 2022-04-27T15:27:04,423 writing top-level names to /tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/top_level.txt 2022-04-27T15:27:04,425 writing dependency_links to /tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/dependency_links.txt 2022-04-27T15:27:04,428 writing /tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/PKG-INFO 2022-04-27T15:27:04,435 writing manifest file '/tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/SOURCES.txt' 2022-04-27T15:27:04,827 reading manifest file '/tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/SOURCES.txt' 2022-04-27T15:27:04,844 writing manifest file '/tmp/pip-pip-egg-info-n0hdzibg/medspacy_pna.egg-info/SOURCES.txt' 2022-04-27T15:27:04,980 Source in /tmp/pip-wheel-r878vkc1/medspacy-pna_efa222467970415c85fce46b1a924d95 has version 0.0.0.3, which satisfies requirement medspacy-pna==0.0.0.3 from https://files.pythonhosted.org/packages/71/86/f87ff185dbb98ba8ecd8c06689a7dcffc060309b570470b5d06ae60db5c5/medspacy_pna-0.0.0.3.tar.gz#sha256=cbdb429c24310def92f0b795ddee56ea105c87f63631346004dc24c893ded641 2022-04-27T15:27:04,981 Removed medspacy-pna==0.0.0.3 from https://files.pythonhosted.org/packages/71/86/f87ff185dbb98ba8ecd8c06689a7dcffc060309b570470b5d06ae60db5c5/medspacy_pna-0.0.0.3.tar.gz#sha256=cbdb429c24310def92f0b795ddee56ea105c87f63631346004dc24c893ded641 from build tracker '/tmp/pip-req-tracker-kbglcs2e' 2022-04-27T15:27:04,990 Created temporary directory: /tmp/pip-unpack-r015ysiw 2022-04-27T15:27:04,991 Building wheels for collected packages: medspacy-pna 2022-04-27T15:27:04,1000 Created temporary directory: /tmp/pip-wheel-3zvril4d 2022-04-27T15:27:05,001 Building wheel for medspacy-pna (setup.py): started 2022-04-27T15:27:05,001 Destination directory: /tmp/pip-wheel-3zvril4d 2022-04-27T15:27:05,002 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-r878vkc1/medspacy-pna_efa222467970415c85fce46b1a924d95/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-r878vkc1/medspacy-pna_efa222467970415c85fce46b1a924d95/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3zvril4d 2022-04-27T15:27:07,146 running bdist_wheel 2022-04-27T15:27:07,164 running build 2022-04-27T15:27:07,165 running build_py 2022-04-27T15:27:07,507 creating build 2022-04-27T15:27:07,508 creating build/lib 2022-04-27T15:27:07,510 creating build/lib/tests 2022-04-27T15:27:07,512 copying tests/test_load_pipeline.py -> build/lib/tests 2022-04-27T15:27:07,517 copying tests/__init__.py -> build/lib/tests 2022-04-27T15:27:07,522 creating build/lib/medspacy_pna 2022-04-27T15:27:07,524 copying medspacy_pna/_extensions.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,529 copying medspacy_pna/util.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,534 copying medspacy_pna/ehost_writer.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,540 copying medspacy_pna/display.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,545 copying medspacy_pna/constants.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,548 copying medspacy_pna/__init__.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,552 copying medspacy_pna/adjudication.py -> build/lib/medspacy_pna 2022-04-27T15:27:07,561 creating build/lib/tests/radiology 2022-04-27T15:27:07,564 copying tests/radiology/test_radiology_document_logic.py -> build/lib/tests/radiology 2022-04-27T15:27:07,570 copying tests/radiology/test_radiology_postprocessing_rules.py -> build/lib/tests/radiology 2022-04-27T15:27:07,576 copying tests/radiology/test_radiology_entity_linking.py -> build/lib/tests/radiology 2022-04-27T15:27:07,581 copying tests/radiology/test_radiology_context_modifiers.py -> build/lib/tests/radiology 2022-04-27T15:27:07,586 copying tests/radiology/test_radiology_concepts.py -> build/lib/tests/radiology 2022-04-27T15:27:07,590 copying tests/radiology/test_radiology_document_classifier.py -> build/lib/tests/radiology 2022-04-27T15:27:07,594 copying tests/radiology/__init__.py -> build/lib/tests/radiology 2022-04-27T15:27:07,597 copying tests/radiology/test_radiology_entities.py -> build/lib/tests/radiology 2022-04-27T15:27:07,603 creating build/lib/tests/discharge 2022-04-27T15:27:07,605 copying tests/discharge/test_discharge_document_logic.py -> build/lib/tests/discharge 2022-04-27T15:27:07,610 copying tests/discharge/test_discharge_concepts.py -> build/lib/tests/discharge 2022-04-27T15:27:07,614 copying tests/discharge/test_discharge_sections.py -> build/lib/tests/discharge 2022-04-27T15:27:07,618 copying tests/discharge/__init__.py -> build/lib/tests/discharge 2022-04-27T15:27:07,622 creating build/lib/tests/emergency 2022-04-27T15:27:07,624 copying tests/emergency/test_emergency_preprocess_rules.py -> build/lib/tests/emergency 2022-04-27T15:27:07,629 copying tests/emergency/test_emergency_concepts.py -> build/lib/tests/emergency 2022-04-27T15:27:07,633 copying tests/emergency/test_emergency_document_logic.py -> build/lib/tests/emergency 2022-04-27T15:27:07,637 copying tests/emergency/__init__.py -> build/lib/tests/emergency 2022-04-27T15:27:07,640 copying tests/emergency/test_emergency_sections.py -> build/lib/tests/emergency 2022-04-27T15:27:07,646 creating build/lib/tests/common 2022-04-27T15:27:07,648 copying tests/common/test_common_attributes.py -> build/lib/tests/common 2022-04-27T15:27:07,653 copying tests/common/test_base_document_classifier.py -> build/lib/tests/common 2022-04-27T15:27:07,657 copying tests/common/test_common_postprocess_rules.py -> build/lib/tests/common 2022-04-27T15:27:07,661 copying tests/common/test_common_concepts.py -> build/lib/tests/common 2022-04-27T15:27:07,664 copying tests/common/__init__.py -> build/lib/tests/common 2022-04-27T15:27:07,669 creating build/lib/tests/util 2022-04-27T15:27:07,671 copying tests/util/testutils.py -> build/lib/tests/util 2022-04-27T15:27:07,675 copying tests/util/__init__.py -> build/lib/tests/util 2022-04-27T15:27:07,679 creating build/lib/medspacy_pna/resources 2022-04-27T15:27:07,681 copying medspacy_pna/resources/callbacks.py -> build/lib/medspacy_pna/resources 2022-04-27T15:27:07,685 copying medspacy_pna/resources/__init__.py -> build/lib/medspacy_pna/resources 2022-04-27T15:27:07,690 creating build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,692 copying medspacy_pna/document_classification/document_classifier.py -> build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,697 copying medspacy_pna/document_classification/discharge_document_classifier.py -> build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,702 copying medspacy_pna/document_classification/emergency_document_classifier.py -> build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,707 copying medspacy_pna/document_classification/radiology_document_classifier.py -> build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,712 copying medspacy_pna/document_classification/__init__.py -> build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,716 copying medspacy_pna/document_classification/ml_document_classifier.py -> build/lib/medspacy_pna/document_classification 2022-04-27T15:27:07,724 creating build/lib/medspacy_pna/resources/radiology 2022-04-27T15:27:07,727 copying medspacy_pna/resources/radiology/radiology_postprocess_rules.py -> build/lib/medspacy_pna/resources/radiology 2022-04-27T15:27:07,733 copying medspacy_pna/resources/radiology/__init__.py -> build/lib/medspacy_pna/resources/radiology 2022-04-27T15:27:07,740 creating build/lib/medspacy_pna/resources/discharge 2022-04-27T15:27:07,742 copying medspacy_pna/resources/discharge/discharge_postprocess_rules.py -> build/lib/medspacy_pna/resources/discharge 2022-04-27T15:27:07,746 copying medspacy_pna/resources/discharge/__init__.py -> build/lib/medspacy_pna/resources/discharge 2022-04-27T15:27:07,750 creating build/lib/medspacy_pna/resources/utah_resources 2022-04-27T15:27:07,752 copying medspacy_pna/resources/utah_resources/__init__.py -> build/lib/medspacy_pna/resources/utah_resources 2022-04-27T15:27:07,757 creating build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:07,759 copying medspacy_pna/resources/emergency/emergency_preprocess_rules.py -> build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:07,764 copying medspacy_pna/resources/emergency/emergency_postprocess_rules.py -> build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:07,767 copying medspacy_pna/resources/emergency/__init__.py -> build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:07,772 creating build/lib/medspacy_pna/resources/common 2022-04-27T15:27:07,774 copying medspacy_pna/resources/common/common_preprocess_rules.py -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:07,778 copying medspacy_pna/resources/common/common_postprocess_rules.py -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:07,782 copying medspacy_pna/resources/common/__init__.py -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:07,787 creating build/lib/medspacy_pna/resources/clinical 2022-04-27T15:27:07,789 copying medspacy_pna/resources/clinical/clinical_postprocess_rules.py -> build/lib/medspacy_pna/resources/clinical 2022-04-27T15:27:07,807 copying medspacy_pna/resources/clinical/__init__.py -> build/lib/medspacy_pna/resources/clinical 2022-04-27T15:27:07,814 creating build/lib/medspacy_pna/resources/configs 2022-04-27T15:27:07,816 copying medspacy_pna/resources/configs/__init__.py -> build/lib/medspacy_pna/resources/configs 2022-04-27T15:27:07,823 creating build/lib/medspacy_pna/resources/utah_resources/radiology 2022-04-27T15:27:07,825 copying medspacy_pna/resources/utah_resources/radiology/__init__.py -> build/lib/medspacy_pna/resources/utah_resources/radiology 2022-04-27T15:27:07,830 creating build/lib/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:07,832 copying medspacy_pna/resources/utah_resources/clinical/__init__.py -> build/lib/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:07,837 creating build/lib/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:07,839 copying medspacy_pna/resources/utah_resources/configs/__init__.py -> build/lib/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:07,882 copying medspacy_pna/resources/radiology/radiology_context_rules.json -> build/lib/medspacy_pna/resources/radiology 2022-04-27T15:27:07,887 copying medspacy_pna/resources/radiology/radiology_target_rules.json -> build/lib/medspacy_pna/resources/radiology 2022-04-27T15:27:07,892 copying medspacy_pna/resources/radiology/radiology_section_rules.json -> build/lib/medspacy_pna/resources/radiology 2022-04-27T15:27:07,899 creating build/lib/medspacy_pna/resources/radiology/__pycache__ 2022-04-27T15:27:07,901 copying medspacy_pna/resources/radiology/__pycache__/radiology_postprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/radiology/__pycache__ 2022-04-27T15:27:07,906 copying medspacy_pna/resources/radiology/__pycache__/__init__.cpython-38.pyc -> build/lib/medspacy_pna/resources/radiology/__pycache__ 2022-04-27T15:27:07,911 copying medspacy_pna/resources/discharge/discharge_section_rules.json -> build/lib/medspacy_pna/resources/discharge 2022-04-27T15:27:07,917 copying medspacy_pna/resources/discharge/discharge_context_rules.json -> build/lib/medspacy_pna/resources/discharge 2022-04-27T15:27:07,924 copying medspacy_pna/resources/discharge/discharge_target_rules.json -> build/lib/medspacy_pna/resources/discharge 2022-04-27T15:27:07,933 creating build/lib/medspacy_pna/resources/discharge/__pycache__ 2022-04-27T15:27:07,935 copying medspacy_pna/resources/discharge/__pycache__/__init__.cpython-38.pyc -> build/lib/medspacy_pna/resources/discharge/__pycache__ 2022-04-27T15:27:07,940 copying medspacy_pna/resources/discharge/__pycache__/discharge_postprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/discharge/__pycache__ 2022-04-27T15:27:07,945 copying medspacy_pna/resources/utah_resources/radiology/radiology_context_rules.json -> build/lib/medspacy_pna/resources/utah_resources/radiology 2022-04-27T15:27:07,951 copying medspacy_pna/resources/utah_resources/clinical/clinical_section_rules.json -> build/lib/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:07,957 copying medspacy_pna/resources/utah_resources/clinical/clinical_target_rules.json -> build/lib/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:07,965 copying medspacy_pna/resources/utah_resources/clinical/clinical_context_rules.json -> build/lib/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:07,972 copying medspacy_pna/resources/utah_resources/clinical/clinical_preprocess_rules.json -> build/lib/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:07,977 copying medspacy_pna/resources/utah_resources/configs/emergency.json -> build/lib/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:07,981 copying medspacy_pna/resources/utah_resources/configs/radiology.json -> build/lib/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:07,987 copying medspacy_pna/resources/utah_resources/configs/discharge.json -> build/lib/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:07,991 creating build/lib/medspacy_pna/resources/__pycache__ 2022-04-27T15:27:07,993 copying medspacy_pna/resources/__pycache__/__init__.cpython-38.pyc -> build/lib/medspacy_pna/resources/__pycache__ 2022-04-27T15:27:08,000 copying medspacy_pna/resources/emergency/emergency_context_rules.json -> build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:08,008 copying medspacy_pna/resources/emergency/target_rules.json -> build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:08,017 copying medspacy_pna/resources/emergency/emergency_target_rules.json -> build/lib/medspacy_pna/resources/emergency 2022-04-27T15:27:08,021 creating build/lib/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,023 copying medspacy_pna/resources/emergency/__pycache__/emergency_preprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,028 copying medspacy_pna/resources/emergency/__pycache__/emergency_postprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,033 copying medspacy_pna/resources/emergency/__pycache__/__init__.cpython-38.pyc -> build/lib/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,039 copying medspacy_pna/resources/common/anatomy_descriptor_modifier_rules.json -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:08,047 copying medspacy_pna/resources/common/anatomy_concept_tag_rules.json -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:08,055 copying medspacy_pna/resources/common/context_rules.json -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:08,066 copying medspacy_pna/resources/common/concept_tag_rules.json -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:08,075 copying medspacy_pna/resources/common/target_rules.json -> build/lib/medspacy_pna/resources/common 2022-04-27T15:27:08,084 creating build/lib/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,086 copying medspacy_pna/resources/common/__pycache__/common_preprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,093 copying medspacy_pna/resources/common/__pycache__/__init__.cpython-38.pyc -> build/lib/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,099 copying medspacy_pna/resources/common/__pycache__/common_postprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,103 copying medspacy_pna/resources/clinical/clinical_section_rules.json -> build/lib/medspacy_pna/resources/clinical 2022-04-27T15:27:08,114 copying medspacy_pna/resources/clinical/clinical_context_rules.json -> build/lib/medspacy_pna/resources/clinical 2022-04-27T15:27:08,120 creating build/lib/medspacy_pna/resources/clinical/__pycache__ 2022-04-27T15:27:08,122 copying medspacy_pna/resources/clinical/__pycache__/__init__.cpython-38.pyc -> build/lib/medspacy_pna/resources/clinical/__pycache__ 2022-04-27T15:27:08,129 copying medspacy_pna/resources/clinical/__pycache__/clinical_postprocess_rules.cpython-38.pyc -> build/lib/medspacy_pna/resources/clinical/__pycache__ 2022-04-27T15:27:08,136 copying medspacy_pna/resources/configs/emergency.json -> build/lib/medspacy_pna/resources/configs 2022-04-27T15:27:08,141 copying medspacy_pna/resources/configs/radiology.json -> build/lib/medspacy_pna/resources/configs 2022-04-27T15:27:08,147 copying medspacy_pna/resources/configs/discharge.json -> build/lib/medspacy_pna/resources/configs 2022-04-27T15:27:08,179 installing to build/bdist.linux-armv7l/wheel 2022-04-27T15:27:08,180 running install 2022-04-27T15:27:08,182 running install_lib 2022-04-27T15:27:08,190 creating build/bdist.linux-armv7l 2022-04-27T15:27:08,191 creating build/bdist.linux-armv7l/wheel 2022-04-27T15:27:08,195 creating build/bdist.linux-armv7l/wheel/tests 2022-04-27T15:27:08,198 creating build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,200 copying build/lib/tests/radiology/test_radiology_document_logic.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,205 copying build/lib/tests/radiology/test_radiology_postprocessing_rules.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,209 copying build/lib/tests/radiology/test_radiology_entity_linking.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,213 copying build/lib/tests/radiology/test_radiology_context_modifiers.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,218 copying build/lib/tests/radiology/test_radiology_concepts.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,223 copying build/lib/tests/radiology/test_radiology_document_classifier.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,228 copying build/lib/tests/radiology/__init__.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,233 copying build/lib/tests/radiology/test_radiology_entities.py -> build/bdist.linux-armv7l/wheel/tests/radiology 2022-04-27T15:27:08,241 creating build/bdist.linux-armv7l/wheel/tests/discharge 2022-04-27T15:27:08,243 copying build/lib/tests/discharge/test_discharge_document_logic.py -> build/bdist.linux-armv7l/wheel/tests/discharge 2022-04-27T15:27:08,247 copying build/lib/tests/discharge/test_discharge_concepts.py -> build/bdist.linux-armv7l/wheel/tests/discharge 2022-04-27T15:27:08,251 copying build/lib/tests/discharge/test_discharge_sections.py -> build/bdist.linux-armv7l/wheel/tests/discharge 2022-04-27T15:27:08,255 copying build/lib/tests/discharge/__init__.py -> build/bdist.linux-armv7l/wheel/tests/discharge 2022-04-27T15:27:08,258 copying build/lib/tests/test_load_pipeline.py -> build/bdist.linux-armv7l/wheel/tests 2022-04-27T15:27:08,265 creating build/bdist.linux-armv7l/wheel/tests/emergency 2022-04-27T15:27:08,267 copying build/lib/tests/emergency/test_emergency_preprocess_rules.py -> build/bdist.linux-armv7l/wheel/tests/emergency 2022-04-27T15:27:08,273 copying build/lib/tests/emergency/test_emergency_concepts.py -> build/bdist.linux-armv7l/wheel/tests/emergency 2022-04-27T15:27:08,279 copying build/lib/tests/emergency/test_emergency_document_logic.py -> build/bdist.linux-armv7l/wheel/tests/emergency 2022-04-27T15:27:08,284 copying build/lib/tests/emergency/__init__.py -> build/bdist.linux-armv7l/wheel/tests/emergency 2022-04-27T15:27:08,287 copying build/lib/tests/emergency/test_emergency_sections.py -> build/bdist.linux-armv7l/wheel/tests/emergency 2022-04-27T15:27:08,292 creating build/bdist.linux-armv7l/wheel/tests/common 2022-04-27T15:27:08,294 copying build/lib/tests/common/test_common_attributes.py -> build/bdist.linux-armv7l/wheel/tests/common 2022-04-27T15:27:08,298 copying build/lib/tests/common/test_base_document_classifier.py -> build/bdist.linux-armv7l/wheel/tests/common 2022-04-27T15:27:08,302 copying build/lib/tests/common/test_common_postprocess_rules.py -> build/bdist.linux-armv7l/wheel/tests/common 2022-04-27T15:27:08,308 copying build/lib/tests/common/test_common_concepts.py -> build/bdist.linux-armv7l/wheel/tests/common 2022-04-27T15:27:08,313 copying build/lib/tests/common/__init__.py -> build/bdist.linux-armv7l/wheel/tests/common 2022-04-27T15:27:08,319 creating build/bdist.linux-armv7l/wheel/tests/util 2022-04-27T15:27:08,322 copying build/lib/tests/util/testutils.py -> build/bdist.linux-armv7l/wheel/tests/util 2022-04-27T15:27:08,327 copying build/lib/tests/util/__init__.py -> build/bdist.linux-armv7l/wheel/tests/util 2022-04-27T15:27:08,330 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2022-04-27T15:27:08,334 creating build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,336 copying build/lib/medspacy_pna/_extensions.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,341 copying build/lib/medspacy_pna/util.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,348 copying build/lib/medspacy_pna/ehost_writer.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,357 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources 2022-04-27T15:27:08,361 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology 2022-04-27T15:27:08,364 copying build/lib/medspacy_pna/resources/radiology/radiology_postprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology 2022-04-27T15:27:08,368 copying build/lib/medspacy_pna/resources/radiology/radiology_context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology 2022-04-27T15:27:08,373 copying build/lib/medspacy_pna/resources/radiology/radiology_target_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology 2022-04-27T15:27:08,379 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology/__pycache__ 2022-04-27T15:27:08,381 copying build/lib/medspacy_pna/resources/radiology/__pycache__/radiology_postprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology/__pycache__ 2022-04-27T15:27:08,386 copying build/lib/medspacy_pna/resources/radiology/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology/__pycache__ 2022-04-27T15:27:08,392 copying build/lib/medspacy_pna/resources/radiology/radiology_section_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology 2022-04-27T15:27:08,398 copying build/lib/medspacy_pna/resources/radiology/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/radiology 2022-04-27T15:27:08,403 copying build/lib/medspacy_pna/resources/callbacks.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources 2022-04-27T15:27:08,408 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge 2022-04-27T15:27:08,410 copying build/lib/medspacy_pna/resources/discharge/discharge_section_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge 2022-04-27T15:27:08,415 copying build/lib/medspacy_pna/resources/discharge/discharge_context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge 2022-04-27T15:27:08,419 copying build/lib/medspacy_pna/resources/discharge/discharge_target_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge 2022-04-27T15:27:08,424 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge/__pycache__ 2022-04-27T15:27:08,426 copying build/lib/medspacy_pna/resources/discharge/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge/__pycache__ 2022-04-27T15:27:08,432 copying build/lib/medspacy_pna/resources/discharge/__pycache__/discharge_postprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge/__pycache__ 2022-04-27T15:27:08,437 copying build/lib/medspacy_pna/resources/discharge/discharge_postprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge 2022-04-27T15:27:08,443 copying build/lib/medspacy_pna/resources/discharge/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/discharge 2022-04-27T15:27:08,448 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources 2022-04-27T15:27:08,451 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/radiology 2022-04-27T15:27:08,453 copying build/lib/medspacy_pna/resources/utah_resources/radiology/radiology_context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/radiology 2022-04-27T15:27:08,457 copying build/lib/medspacy_pna/resources/utah_resources/radiology/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/radiology 2022-04-27T15:27:08,462 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:08,463 copying build/lib/medspacy_pna/resources/utah_resources/clinical/clinical_section_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:08,469 copying build/lib/medspacy_pna/resources/utah_resources/clinical/clinical_target_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:08,474 copying build/lib/medspacy_pna/resources/utah_resources/clinical/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:08,479 copying build/lib/medspacy_pna/resources/utah_resources/clinical/clinical_context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:08,484 copying build/lib/medspacy_pna/resources/utah_resources/clinical/clinical_preprocess_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/clinical 2022-04-27T15:27:08,489 copying build/lib/medspacy_pna/resources/utah_resources/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources 2022-04-27T15:27:08,493 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:08,495 copying build/lib/medspacy_pna/resources/utah_resources/configs/emergency.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:08,499 copying build/lib/medspacy_pna/resources/utah_resources/configs/radiology.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:08,503 copying build/lib/medspacy_pna/resources/utah_resources/configs/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:08,506 copying build/lib/medspacy_pna/resources/utah_resources/configs/discharge.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/utah_resources/configs 2022-04-27T15:27:08,514 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/__pycache__ 2022-04-27T15:27:08,516 copying build/lib/medspacy_pna/resources/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/__pycache__ 2022-04-27T15:27:08,524 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,526 copying build/lib/medspacy_pna/resources/emergency/emergency_context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,532 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,534 copying build/lib/medspacy_pna/resources/emergency/__pycache__/emergency_preprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,538 copying build/lib/medspacy_pna/resources/emergency/__pycache__/emergency_postprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,543 copying build/lib/medspacy_pna/resources/emergency/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency/__pycache__ 2022-04-27T15:27:08,546 copying build/lib/medspacy_pna/resources/emergency/emergency_preprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,552 copying build/lib/medspacy_pna/resources/emergency/target_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,557 copying build/lib/medspacy_pna/resources/emergency/emergency_postprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,562 copying build/lib/medspacy_pna/resources/emergency/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,567 copying build/lib/medspacy_pna/resources/emergency/emergency_target_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/emergency 2022-04-27T15:27:08,572 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,574 copying build/lib/medspacy_pna/resources/common/anatomy_descriptor_modifier_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,579 copying build/lib/medspacy_pna/resources/common/common_preprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,583 copying build/lib/medspacy_pna/resources/common/anatomy_concept_tag_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,588 copying build/lib/medspacy_pna/resources/common/context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,601 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,603 copying build/lib/medspacy_pna/resources/common/__pycache__/common_preprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,609 copying build/lib/medspacy_pna/resources/common/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,613 copying build/lib/medspacy_pna/resources/common/__pycache__/common_postprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common/__pycache__ 2022-04-27T15:27:08,617 copying build/lib/medspacy_pna/resources/common/concept_tag_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,624 copying build/lib/medspacy_pna/resources/common/common_postprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,628 copying build/lib/medspacy_pna/resources/common/target_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,634 copying build/lib/medspacy_pna/resources/common/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/common 2022-04-27T15:27:08,640 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical 2022-04-27T15:27:08,643 copying build/lib/medspacy_pna/resources/clinical/clinical_section_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical 2022-04-27T15:27:08,652 copying build/lib/medspacy_pna/resources/clinical/clinical_postprocess_rules.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical 2022-04-27T15:27:08,658 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical/__pycache__ 2022-04-27T15:27:08,660 copying build/lib/medspacy_pna/resources/clinical/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical/__pycache__ 2022-04-27T15:27:08,665 copying build/lib/medspacy_pna/resources/clinical/__pycache__/clinical_postprocess_rules.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical/__pycache__ 2022-04-27T15:27:08,669 copying build/lib/medspacy_pna/resources/clinical/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical 2022-04-27T15:27:08,673 copying build/lib/medspacy_pna/resources/clinical/clinical_context_rules.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/clinical 2022-04-27T15:27:08,679 copying build/lib/medspacy_pna/resources/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources 2022-04-27T15:27:08,685 creating build/bdist.linux-armv7l/wheel/medspacy_pna/resources/configs 2022-04-27T15:27:08,687 copying build/lib/medspacy_pna/resources/configs/emergency.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/configs 2022-04-27T15:27:08,692 copying build/lib/medspacy_pna/resources/configs/radiology.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/configs 2022-04-27T15:27:08,696 copying build/lib/medspacy_pna/resources/configs/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/configs 2022-04-27T15:27:08,700 copying build/lib/medspacy_pna/resources/configs/discharge.json -> build/bdist.linux-armv7l/wheel/medspacy_pna/resources/configs 2022-04-27T15:27:08,704 copying build/lib/medspacy_pna/display.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,709 copying build/lib/medspacy_pna/constants.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,715 creating build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,717 copying build/lib/medspacy_pna/document_classification/document_classifier.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,723 copying build/lib/medspacy_pna/document_classification/discharge_document_classifier.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,730 copying build/lib/medspacy_pna/document_classification/emergency_document_classifier.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,736 copying build/lib/medspacy_pna/document_classification/radiology_document_classifier.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,741 copying build/lib/medspacy_pna/document_classification/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,745 copying build/lib/medspacy_pna/document_classification/ml_document_classifier.py -> build/bdist.linux-armv7l/wheel/medspacy_pna/document_classification 2022-04-27T15:27:08,750 copying build/lib/medspacy_pna/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,755 copying build/lib/medspacy_pna/adjudication.py -> build/bdist.linux-armv7l/wheel/medspacy_pna 2022-04-27T15:27:08,761 running install_egg_info 2022-04-27T15:27:08,808 running egg_info 2022-04-27T15:27:08,809 writing medspacy_pna.egg-info/PKG-INFO 2022-04-27T15:27:08,814 writing requirements to medspacy_pna.egg-info/requires.txt 2022-04-27T15:27:08,817 writing dependency_links to medspacy_pna.egg-info/dependency_links.txt 2022-04-27T15:27:08,819 writing top-level names to medspacy_pna.egg-info/top_level.txt 2022-04-27T15:27:08,851 reading manifest file 'medspacy_pna.egg-info/SOURCES.txt' 2022-04-27T15:27:08,879 writing manifest file 'medspacy_pna.egg-info/SOURCES.txt' 2022-04-27T15:27:08,883 Copying medspacy_pna.egg-info to build/bdist.linux-armv7l/wheel/medspacy_pna-0.0.0.3-py3.5.egg-info 2022-04-27T15:27:08,908 running install_scripts 2022-04-27T15:27:09,087 creating build/bdist.linux-armv7l/wheel/medspacy_pna-0.0.0.3.dist-info/WHEEL 2022-04-27T15:27:09,747 Building wheel for medspacy-pna (setup.py): finished with status 'done' 2022-04-27T15:27:09,752 Created wheel for medspacy-pna: filename=medspacy_pna-0.0.0.3-py3-none-any.whl size=90314 sha256=d5461a02ad6af4fce292e72cace9590df0f6d7f4366bbec9d98be5c47dd62434 2022-04-27T15:27:09,753 Stored in directory: /tmp/pip-ephem-wheel-cache-tedkap5g/wheels/aa/d1/dd/2c08b34a3a8dddb420f11b7d470edb1c965ad97dea239d03f1 2022-04-27T15:27:09,780 Successfully built medspacy-pna 2022-04-27T15:27:09,800 Removed build tracker: '/tmp/pip-req-tracker-kbglcs2e'