2022-05-06T14:50:52,807 Created temporary directory: /tmp/pip-ephem-wheel-cache-iuy1pczl
2022-05-06T14:50:52,812 Created temporary directory: /tmp/pip-req-tracker-a9ayq2zu
2022-05-06T14:50:52,813 Initialized build tracking at /tmp/pip-req-tracker-a9ayq2zu
2022-05-06T14:50:52,813 Created build tracker: /tmp/pip-req-tracker-a9ayq2zu
2022-05-06T14:50:52,814 Entered build tracker: /tmp/pip-req-tracker-a9ayq2zu
2022-05-06T14:50:52,815 Created temporary directory: /tmp/pip-wheel-eet743k1
2022-05-06T14:50:52,884 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-05-06T14:50:52,898 2 location(s) to search for versions of acanthophis:
2022-05-06T14:50:52,898 * https://pypi.org/simple/acanthophis/
2022-05-06T14:50:52,898 * https://www.piwheels.org/simple/acanthophis/
2022-05-06T14:50:52,899 Fetching project page and analyzing links: https://pypi.org/simple/acanthophis/
2022-05-06T14:50:52,900 Getting page https://pypi.org/simple/acanthophis/
2022-05-06T14:50:52,903 Found index url https://pypi.org/simple
2022-05-06T14:50:53,025   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/ea/b6/42a0a63adb932c29855f6cba7c74de1755b26ea6d7598cdd6167af26d56c/acanthophis-0.1.3-py3-none-any.whl#sha256=09c1e4a20302228311ec38d255d81c9d9efc9dfcc0eed69bbe3fe7ffd51b155a (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,026   Found link https://files.pythonhosted.org/packages/80/c5/62c14c4b84e50f2eb9d2bdb916342b044a4d8520f411cbd0a7dff6492688/acanthophis-0.1.3.tar.gz#sha256=44465eefbba92dc975274bcfdaf6415702412e9e0310d92fa3d579aef7517a0e (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.3
2022-05-06T14:50:53,027   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/ff/73/f66bb4966b886c3af80c105112b32e26b99ebe4ae228b53f4c3696523f14/acanthophis-0.1.4-py3-none-any.whl#sha256=88587432585e62432ca7439b686d03dba3dfd4f2135e466dfe94a3509334c642 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,029   Found link https://files.pythonhosted.org/packages/a3/f6/34b71f98350066d5ead5e92488452d4cc0ef249f1945cff5dd69dea3efe9/acanthophis-0.1.4.tar.gz#sha256=15c50bc7e06b8ab4aedbd39b8cd8571cef7ac3440590d8cd54e3d122e0728c39 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.4
2022-05-06T14:50:53,029   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/4c/61/34e81ead6c5d899412bbd9c34876aa6a902774cd8abda4396a9e4f311a6d/acanthophis-0.1.6-py3-none-any.whl#sha256=49ce23f4f2b61a8c2252956055345ef2934bae8f67035c1b6b01a798a870fff7 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,031   Found link https://files.pythonhosted.org/packages/78/fe/f8104d0a136a3693d4a7fb774e2903cbf6a8f9205c70e6ef3a81bceaa5e7/acanthophis-0.1.6.tar.gz#sha256=1f5adf1741c8b5b6fe53be5f024d470f62576745bff418a70ef51c6d0025c5ad (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.6
2022-05-06T14:50:53,031   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/1c/25/a1456f153415ee06fbe6b5bcb0f480eab73e2a49d0d921856a846d4211c8/acanthophis-0.1.10-py3-none-any.whl#sha256=b32fd62375f477176d30516956c863fa7b02aee7fe4a91284e107a1826705c09 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,033   Found link https://files.pythonhosted.org/packages/f1/86/f6cd26ed2733dd433a17556c0e51e6c76cc6f1ffba8665df088ac4524dea/acanthophis-0.1.10.tar.gz#sha256=14286410cbb06642cccd792043dc9732edca964af6ceb1957e32d1e01b25fb98 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.10
2022-05-06T14:50:53,034   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/d2/8b/7292d98eb0c408b82d2ee8fefbb30cda765e124c305767948e9fb649f28d/acanthophis-0.1.12-py2.py3-none-any.whl#sha256=b7492826c625e3de37abe93861d12b66310778be8df7356f7aed1b38397a59f3 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,035   Found link https://files.pythonhosted.org/packages/f8/90/d0d55f09f5991a52dc0eb4703a8a6281ce121215cbdaa5e7b8463b6b25fa/acanthophis-0.1.12.tar.gz#sha256=c957a5b37abee69bfcfc66d1339d5991d33ecbd01d7363041470feed21a55d04 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.12
2022-05-06T14:50:53,036   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/21/87/347d55e8299283fe68b06b41d227ae42d4dc4332024f941aa661cafdab56/acanthophis-0.1.13-py2.py3-none-any.whl#sha256=1e4dfff5cfa7cda756ad5cbccf381b11127402103f25d170588fe9b79fa0db01 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,037   Found link https://files.pythonhosted.org/packages/e8/44/1ee77a92a8c68c3b2fbc3bb6882e3cb5bcc049cc982642d1e83158a04cf3/acanthophis-0.1.13.tar.gz#sha256=8396d41c43015381ba6b459ec3ea428921842e695f44361dffc69294ec365433 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.13
2022-05-06T14:50:53,038   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/8e/bc/11cc44ab719e214d6acb6ea4c202c385ea286fd9218cc1989442b3b6aa0d/acanthophis-0.1.14-py2.py3-none-any.whl#sha256=f43892516b7ad6d18cba8d1d0a4d74235d1f29875612eaab35f435401ace9b42 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,039   Found link https://files.pythonhosted.org/packages/35/d5/df0077fabb3305e8f4def77ab220e323cce945f7c0dacf90c9077359f00a/acanthophis-0.1.14.tar.gz#sha256=4bc89f00f6767a129022c03d45a9b776e862fc027f218f974a1e39e653a03e31 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.14
2022-05-06T14:50:53,040   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/f6/83/0eb51fcbeae3db758f149c44426a8eb1f8b5b0d99b15230c9733fe23e70e/acanthophis-0.1.15-py2.py3-none-any.whl#sha256=3a47b454d28c4e3e362eb4842dbca565422bd664ac940340a5e0168c56bad6ed (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,041   Found link https://files.pythonhosted.org/packages/c9/b9/5781fcd9fd96160a028f1a5a1c33418f7fceb96597ce598fb14b2f26fdeb/acanthophis-0.1.15.tar.gz#sha256=96b88b76dc0a61fb1c1c5104ed62ea96e8ece2481f936fe7195e15a0242d9f79 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.15
2022-05-06T14:50:53,042   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/b8/67/664ee1db3ec51bca7bba6ec972d31c5cc7785ae9364f5d515dbe52a75628/acanthophis-0.1.16-py2.py3-none-any.whl#sha256=9143c0bf1f47849aeea5ea0acfeb549cfb4185c062468fe3eaa7ce01592c13fc (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,043   Found link https://files.pythonhosted.org/packages/48/9f/ddb0ab497ce688d728130b85542bd73ff8d8714743a20211714b8b86acd4/acanthophis-0.1.16.tar.gz#sha256=755bbe419b06db49fa6185ae7155ddc8fa93fc4e16de1f240f101745046dccc1 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.16
2022-05-06T14:50:53,044   Skipping link: No binaries permitted for acanthophis: https://files.pythonhosted.org/packages/ab/7f/c73bf764df28b18cfe12ded91dae0c5e1ce130fab1db9db5bf949cd1cb58/acanthophis-0.1.17-py2.py3-none-any.whl#sha256=aed1549cf3cf8fb517352f1cd9a17a127a79b7fd885d64f22e1ee2393c93ff05 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,045   Found link https://files.pythonhosted.org/packages/43/13/564304db3e4bdc51d514686fb9996d276fdbe39fd01ccf0104fdaf907d1e/acanthophis-0.1.17.tar.gz#sha256=d4bed6bb825539abf8dcab2182fa0cd565515e15f723000ee0b01382be7268b9 (from https://pypi.org/simple/acanthophis/) (requires-python:>=3.7), version: 0.1.17
2022-05-06T14:50:53,046 Fetching project page and analyzing links: https://www.piwheels.org/simple/acanthophis/
2022-05-06T14:50:53,047 Getting page https://www.piwheels.org/simple/acanthophis/
2022-05-06T14:50:53,049 Found index url https://www.piwheels.org/simple
2022-05-06T14:50:53,271   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.16-py2.py3-none-any.whl#sha256=098afaac7a7f964384b67ad7f35ec4e197c0ce478071d908c352298d58881b10 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,271   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.15-py2.py3-none-any.whl#sha256=1fafa489f523834f5ca2a6b8b47e32775a2da8f48ef62231179f57389ec11547 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,272   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.14-py2.py3-none-any.whl#sha256=f43892516b7ad6d18cba8d1d0a4d74235d1f29875612eaab35f435401ace9b42 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,273   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.13-py2.py3-none-any.whl#sha256=1e4dfff5cfa7cda756ad5cbccf381b11127402103f25d170588fe9b79fa0db01 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,273   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.12-py2.py3-none-any.whl#sha256=b7492826c625e3de37abe93861d12b66310778be8df7356f7aed1b38397a59f3 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,273   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.10-py3-none-any.whl#sha256=b32fd62375f477176d30516956c863fa7b02aee7fe4a91284e107a1826705c09 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,274   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.6-py3-none-any.whl#sha256=49ce23f4f2b61a8c2252956055345ef2934bae8f67035c1b6b01a798a870fff7 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,274   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.4-py3-none-any.whl#sha256=88587432585e62432ca7439b686d03dba3dfd4f2135e466dfe94a3509334c642 (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,275   Skipping link: No binaries permitted for acanthophis: https://www.piwheels.org/simple/acanthophis/acanthophis-0.1.3-py3-none-any.whl#sha256=09c1e4a20302228311ec38d255d81c9d9efc9dfcc0eed69bbe3fe7ffd51b155a (from https://www.piwheels.org/simple/acanthophis/) (requires-python:>=3.7)
2022-05-06T14:50:53,275 Skipping link: not a file: https://www.piwheels.org/simple/acanthophis/
2022-05-06T14:50:53,276 Skipping link: not a file: https://pypi.org/simple/acanthophis/
2022-05-06T14:50:53,313 Given no hashes to check 1 links for project 'acanthophis': discarding no candidates
2022-05-06T14:50:53,345 Collecting acanthophis==0.1.17
2022-05-06T14:50:53,349   Created temporary directory: /tmp/pip-unpack-ijhqvw8c
2022-05-06T14:50:53,683   Downloading acanthophis-0.1.17.tar.gz (276 kB)
2022-05-06T14:50:54,168   Added acanthophis==0.1.17 from https://files.pythonhosted.org/packages/43/13/564304db3e4bdc51d514686fb9996d276fdbe39fd01ccf0104fdaf907d1e/acanthophis-0.1.17.tar.gz#sha256=d4bed6bb825539abf8dcab2182fa0cd565515e15f723000ee0b01382be7268b9 to build tracker '/tmp/pip-req-tracker-a9ayq2zu'
2022-05-06T14:50:54,186   Created temporary directory: /tmp/pip-build-env-f7l103hh
2022-05-06T14:50:54,199   Created temporary directory: /tmp/pip-standalone-pip-1o_1m97g
2022-05-06T14:50:56,541   Installing build dependencies: started
2022-05-06T14:50:56,543   Running command pip subprocess to install build dependencies
2022-05-06T14:51:06,656   Using pip 22.0.4 from /tmp/pip-standalone-pip-1o_1m97g/__env_pip__.zip/pip (python 3.7)
2022-05-06T14:51:08,083   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-05-06T14:51:12,041   Collecting setuptools>=48
2022-05-06T14:51:12,302     Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.1.0-py3-none-any.whl (1.1 MB)
2022-05-06T14:51:13,267   Collecting setuptools_scm[toml]<6,>=4
2022-05-06T14:51:13,308     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-5.0.2-py2.py3-none-any.whl (29 kB)
2022-05-06T14:51:13,453   Collecting setuptools_scm_git_archive
2022-05-06T14:51:13,492     Using cached https://www.piwheels.org/simple/setuptools-scm-git-archive/setuptools_scm_git_archive-1.1-py2.py3-none-any.whl (3.3 kB)
2022-05-06T14:51:14,029   Collecting wheel>=0.29.0
2022-05-06T14:51:14,063     Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB)
2022-05-06T14:51:14,278   Collecting toml
2022-05-06T14:51:14,316     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2022-05-06T14:51:19,861   Installing collected packages: setuptools_scm_git_archive, wheel, toml, setuptools, setuptools_scm
2022-05-06T14:51:20,187     Creating /tmp/pip-build-env-f7l103hh/overlay/bin
2022-05-06T14:51:20,191     changing mode of /tmp/pip-build-env-f7l103hh/overlay/bin/wheel to 755
2022-05-06T14:51:24,911   Successfully installed setuptools-62.1.0 setuptools_scm-5.0.2 setuptools_scm_git_archive-1.1 toml-0.10.2 wheel-0.37.1
2022-05-06T14:51:25,568   Installing build dependencies: finished with status 'done'
2022-05-06T14:51:25,595   Getting requirements to build wheel: started
2022-05-06T14:51:25,597   Running command Getting requirements to build wheel
2022-05-06T14:51:27,173   Getting requirements to build wheel: finished with status 'done'
2022-05-06T14:51:27,203   Created temporary directory: /tmp/pip-modern-metadata-3nkgm8oy
2022-05-06T14:51:27,209   Preparing metadata (pyproject.toml): started
2022-05-06T14:51:27,211   Running command Preparing metadata (pyproject.toml)
2022-05-06T14:51:29,036   running dist_info
2022-05-06T14:51:29,068   creating /tmp/pip-modern-metadata-3nkgm8oy/acanthophis.egg-info
2022-05-06T14:51:29,082   writing manifest file '/tmp/pip-modern-metadata-3nkgm8oy/acanthophis.egg-info/SOURCES.txt'
2022-05-06T14:51:29,183   warning: no files found matching 'acanthophis/profiles/**'
2022-05-06T14:51:29,191   writing manifest file '/tmp/pip-modern-metadata-3nkgm8oy/acanthophis.egg-info/SOURCES.txt'
2022-05-06T14:51:29,456   Preparing metadata (pyproject.toml): finished with status 'done'
2022-05-06T14:51:29,470   Source in /tmp/pip-wheel-eet743k1/acanthophis_b991b75e28a246dc9384a0cd307ab434 has version 0.1.17, which satisfies requirement acanthophis==0.1.17 from https://files.pythonhosted.org/packages/43/13/564304db3e4bdc51d514686fb9996d276fdbe39fd01ccf0104fdaf907d1e/acanthophis-0.1.17.tar.gz#sha256=d4bed6bb825539abf8dcab2182fa0cd565515e15f723000ee0b01382be7268b9
2022-05-06T14:51:29,472   Removed acanthophis==0.1.17 from https://files.pythonhosted.org/packages/43/13/564304db3e4bdc51d514686fb9996d276fdbe39fd01ccf0104fdaf907d1e/acanthophis-0.1.17.tar.gz#sha256=d4bed6bb825539abf8dcab2182fa0cd565515e15f723000ee0b01382be7268b9 from build tracker '/tmp/pip-req-tracker-a9ayq2zu'
2022-05-06T14:51:29,487 Created temporary directory: /tmp/pip-unpack-frt6uyqc
2022-05-06T14:51:29,488 Building wheels for collected packages: acanthophis
2022-05-06T14:51:29,498   Created temporary directory: /tmp/pip-wheel-egbqhzi6
2022-05-06T14:51:29,498   Destination directory: /tmp/pip-wheel-egbqhzi6
2022-05-06T14:51:29,503   Building wheel for acanthophis (pyproject.toml): started
2022-05-06T14:51:29,505   Running command Building wheel for acanthophis (pyproject.toml)
2022-05-06T14:51:31,416   running bdist_wheel
2022-05-06T14:51:31,855   running build
2022-05-06T14:51:31,856   running build_py
2022-05-06T14:51:31,863   creating build
2022-05-06T14:51:31,864   creating build/lib
2022-05-06T14:51:31,865   creating build/lib/acanthophis
2022-05-06T14:51:31,867   copying acanthophis/__init__.py -> build/lib/acanthophis
2022-05-06T14:51:31,872   copying acanthophis/cmd.py -> build/lib/acanthophis
2022-05-06T14:51:31,875   copying acanthophis/_version.py -> build/lib/acanthophis
2022-05-06T14:51:31,877   running egg_info
2022-05-06T14:51:32,013   warning: no files found matching 'acanthophis/profiles/**'
2022-05-06T14:51:32,025   writing manifest file 'acanthophis.egg-info/SOURCES.txt'
2022-05-06T14:51:32,041   creating build/lib/acanthophis/envs
2022-05-06T14:51:32,042   copying acanthophis/envs/abra2.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,047   copying acanthophis/envs/align.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,050   copying acanthophis/envs/global.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,054   copying acanthophis/envs/kraken.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,058   copying acanthophis/envs/qcstats.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,062   copying acanthophis/envs/qualimap.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,065   copying acanthophis/envs/reads.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,069   copying acanthophis/envs/snpeff.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,073   copying acanthophis/envs/varcall.yml -> build/lib/acanthophis/envs
2022-05-06T14:51:32,076   creating build/lib/acanthophis/profiles
2022-05-06T14:51:32,077   creating build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,079   copying acanthophis/profiles/ebio-cluster/README.md -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,083   copying acanthophis/profiles/ebio-cluster/cluster.yml -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,087   copying acanthophis/profiles/ebio-cluster/config.yaml -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,090   copying acanthophis/profiles/ebio-cluster/jobscript.sh -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,094   copying acanthophis/profiles/ebio-cluster/jobstatus -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,098   copying acanthophis/profiles/ebio-cluster/jobsubmit -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,102   copying acanthophis/profiles/ebio-cluster/run.job -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,106   copying acanthophis/profiles/ebio-cluster/submit.sh -> build/lib/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,110   creating build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,111   copying acanthophis/profiles/gadi.nci.org.au/README.md -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,115   copying acanthophis/profiles/gadi.nci.org.au/cluster.yml -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,119   copying acanthophis/profiles/gadi.nci.org.au/config.yaml -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,123   copying acanthophis/profiles/gadi.nci.org.au/jobscript.sh -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,127   copying acanthophis/profiles/gadi.nci.org.au/jobstatus -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,130   copying acanthophis/profiles/gadi.nci.org.au/jobsubmit -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,134   copying acanthophis/profiles/gadi.nci.org.au/run.job -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,138   copying acanthophis/profiles/gadi.nci.org.au/submit.sh -> build/lib/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,141   creating build/lib/acanthophis/rules
2022-05-06T14:51:32,143   copying acanthophis/rules/align.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,148   copying acanthophis/rules/base.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,151   copying acanthophis/rules/denovo.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,156   copying acanthophis/rules/gatk.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,159   copying acanthophis/rules/kraken.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,163   copying acanthophis/rules/multiqc.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,167   copying acanthophis/rules/qualimap.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,170   copying acanthophis/rules/reads.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,179   copying acanthophis/rules/varcall.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,184   copying acanthophis/rules/variantannotation.rules -> build/lib/acanthophis/rules
2022-05-06T14:51:32,188   creating build/lib/acanthophis/template
2022-05-06T14:51:32,189   copying acanthophis/template/Snakefile -> build/lib/acanthophis/template
2022-05-06T14:51:32,193   copying acanthophis/template/config.yml -> build/lib/acanthophis/template
2022-05-06T14:51:32,197   copying acanthophis/template/environment.yml -> build/lib/acanthophis/template
2022-05-06T14:51:32,201   creating build/lib/acanthophis/template/rawdata
2022-05-06T14:51:32,202   copying acanthophis/template/rawdata/adapters.txt -> build/lib/acanthophis/template/rawdata
2022-05-06T14:51:32,227   running install
2022-05-06T14:51:32,290   running install_lib
2022-05-06T14:51:32,297   creating build/bdist.linux-armv7l
2022-05-06T14:51:32,297   creating build/bdist.linux-armv7l/wheel
2022-05-06T14:51:32,301   creating build/bdist.linux-armv7l/wheel/acanthophis
2022-05-06T14:51:32,308   creating build/bdist.linux-armv7l/wheel/acanthophis/rules
2022-05-06T14:51:32,346   creating build/bdist.linux-armv7l/wheel/acanthophis/template
2022-05-06T14:51:32,352   creating build/bdist.linux-armv7l/wheel/acanthophis/template/rawdata
2022-05-06T14:51:32,367   creating build/bdist.linux-armv7l/wheel/acanthophis/envs
2022-05-06T14:51:32,399   creating build/bdist.linux-armv7l/wheel/acanthophis/profiles
2022-05-06T14:51:32,402   creating build/bdist.linux-armv7l/wheel/acanthophis/profiles/gadi.nci.org.au
2022-05-06T14:51:32,429   creating build/bdist.linux-armv7l/wheel/acanthophis/profiles/ebio-cluster
2022-05-06T14:51:32,454   running install_egg_info
2022-05-06T14:51:32,463   Copying acanthophis.egg-info to build/bdist.linux-armv7l/wheel/acanthophis-0.1.17-py3.7.egg-info
2022-05-06T14:51:32,482   running install_scripts
2022-05-06T14:51:32,977   Building wheel for acanthophis (pyproject.toml): finished with status 'done'
2022-05-06T14:51:32,992   Created wheel for acanthophis: filename=acanthophis-0.1.17-py2.py3-none-any.whl size=39952 sha256=223387c5c11ac35e1059c3da5417b0332268654b79704c9eacf6dbb8ad2b2bfc
2022-05-06T14:51:32,994   Stored in directory: /tmp/pip-ephem-wheel-cache-iuy1pczl/wheels/2a/4a/a6/4d36b3a397e41a74a85c5f607ca9c893eaa0976c140442ff6f
2022-05-06T14:51:33,020 Successfully built acanthophis
2022-05-06T14:51:33,029 Removed build tracker: '/tmp/pip-req-tracker-a9ayq2zu'