2022-05-13T00:01:22,904 Created temporary directory: /tmp/pip-ephem-wheel-cache-gf31dox6 2022-05-13T00:01:22,910 Created temporary directory: /tmp/pip-req-tracker-78uxlub4 2022-05-13T00:01:22,911 Initialized build tracking at /tmp/pip-req-tracker-78uxlub4 2022-05-13T00:01:22,912 Created build tracker: /tmp/pip-req-tracker-78uxlub4 2022-05-13T00:01:22,912 Entered build tracker: /tmp/pip-req-tracker-78uxlub4 2022-05-13T00:01:22,913 Created temporary directory: /tmp/pip-wheel-j4yybxv2 2022-05-13T00:01:23,094 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-05-13T00:01:23,102 2 location(s) to search for versions of ageas: 2022-05-13T00:01:23,102 * https://pypi.org/simple/ageas/ 2022-05-13T00:01:23,102 * https://www.piwheels.org/simple/ageas/ 2022-05-13T00:01:23,103 Fetching project page and analyzing links: https://pypi.org/simple/ageas/ 2022-05-13T00:01:23,104 Getting page https://pypi.org/simple/ageas/ 2022-05-13T00:01:23,108 Found index url https://pypi.org/simple 2022-05-13T00:01:23,294 Skipping link: No binaries permitted for ageas: https://files.pythonhosted.org/packages/6e/f5/256da210d1e70fbf2192947fef0ee55c9f51a5af0004497f03596c6bbcf6/Ageas-0.0.1a1-py3-none-any.whl#sha256=1e10a5f8d77d8a7616e6cbc38c554a17ccc87d87c5bead30ef2efea8530d9647 (from https://pypi.org/simple/ageas/) (requires-python:>=3.6) 2022-05-13T00:01:23,296 Found link https://files.pythonhosted.org/packages/89/ca/14fd97bab46ee9a29fc0fac7ea91286d17b057b6543a6efe5a988085c10a/Ageas-0.0.1a1.tar.gz#sha256=df1fd8c670e295cd5e03f5edda4d65128d5a074fb7fc870f15b715a4b66a922e (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a1 2022-05-13T00:01:23,297 Found link https://files.pythonhosted.org/packages/53/fc/d35b794eda301968d4f352fd96c10a28b927ddbed44134dca1b604f5b098/Ageas-0.0.1a4.tar.gz#sha256=e83114cf22deb6f9bda37b8748500d597f151b5a90a2972d82f0eceeb20f1b04 (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a4 2022-05-13T00:01:23,298 Fetching project page and analyzing links: https://www.piwheels.org/simple/ageas/ 2022-05-13T00:01:23,299 Getting page https://www.piwheels.org/simple/ageas/ 2022-05-13T00:01:23,301 Found index url https://www.piwheels.org/simple 2022-05-13T00:01:23,777 Skipping link: No binaries permitted for ageas: https://www.piwheels.org/simple/ageas/Ageas-0.0.1a1-py3-none-any.whl#sha256=08a355eb6e77efb9f0d5b880a97292ca812f35c8b13af48794c523546d7c8a61 (from https://www.piwheels.org/simple/ageas/) (requires-python:>=3.6) 2022-05-13T00:01:23,778 Skipping link: not a file: https://www.piwheels.org/simple/ageas/ 2022-05-13T00:01:23,778 Skipping link: not a file: https://pypi.org/simple/ageas/ 2022-05-13T00:01:23,819 Given no hashes to check 1 links for project 'ageas': discarding no candidates 2022-05-13T00:01:23,851 Collecting ageas==0.0.1a4 2022-05-13T00:01:23,856 Created temporary directory: /tmp/pip-unpack-40tb3x8t 2022-05-13T00:01:26,905 Downloading Ageas-0.0.1a4.tar.gz (55.4 MB) 2022-05-13T00:01:42,920 Added ageas==0.0.1a4 from https://files.pythonhosted.org/packages/53/fc/d35b794eda301968d4f352fd96c10a28b927ddbed44134dca1b604f5b098/Ageas-0.0.1a4.tar.gz#sha256=e83114cf22deb6f9bda37b8748500d597f151b5a90a2972d82f0eceeb20f1b04 to build tracker '/tmp/pip-req-tracker-78uxlub4' 2022-05-13T00:01:42,922 Running setup.py (path:/tmp/pip-wheel-j4yybxv2/ageas_74badcc4ce8a40e6badbce0facb2f724/setup.py) egg_info for package ageas 2022-05-13T00:01:42,924 Created temporary directory: /tmp/pip-pip-egg-info-9rr14vhh 2022-05-13T00:01:42,924 Preparing metadata (setup.py): started 2022-05-13T00:01:42,926 Running command python setup.py egg_info 2022-05-13T00:01:45,364 running egg_info 2022-05-13T00:01:45,368 creating /tmp/pip-pip-egg-info-9rr14vhh/Ageas.egg-info 2022-05-13T00:01:45,381 writing manifest file '/tmp/pip-pip-egg-info-9rr14vhh/Ageas.egg-info/SOURCES.txt' 2022-05-13T00:01:45,423 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing 'v0.0.1-alpha4' to '0.0.1a4' 2022-05-13T00:01:45,423 warnings.warn(tmpl.format(**locals())) 2022-05-13T00:01:45,424 warning: no files found matching 'CODE_OF_CONDUCT.md' 2022-05-13T00:01:45,441 writing manifest file '/tmp/pip-pip-egg-info-9rr14vhh/Ageas.egg-info/SOURCES.txt' 2022-05-13T00:01:45,571 Preparing metadata (setup.py): finished with status 'done' 2022-05-13T00:01:45,581 Source in /tmp/pip-wheel-j4yybxv2/ageas_74badcc4ce8a40e6badbce0facb2f724 has version 0.0.1a4, which satisfies requirement ageas==0.0.1a4 from https://files.pythonhosted.org/packages/53/fc/d35b794eda301968d4f352fd96c10a28b927ddbed44134dca1b604f5b098/Ageas-0.0.1a4.tar.gz#sha256=e83114cf22deb6f9bda37b8748500d597f151b5a90a2972d82f0eceeb20f1b04 2022-05-13T00:01:45,583 Removed ageas==0.0.1a4 from https://files.pythonhosted.org/packages/53/fc/d35b794eda301968d4f352fd96c10a28b927ddbed44134dca1b604f5b098/Ageas-0.0.1a4.tar.gz#sha256=e83114cf22deb6f9bda37b8748500d597f151b5a90a2972d82f0eceeb20f1b04 from build tracker '/tmp/pip-req-tracker-78uxlub4' 2022-05-13T00:01:45,597 Created temporary directory: /tmp/pip-unpack-f6bw5r6z 2022-05-13T00:01:45,598 Building wheels for collected packages: ageas 2022-05-13T00:01:45,607 Created temporary directory: /tmp/pip-wheel-rk2whwsi 2022-05-13T00:01:45,608 Building wheel for ageas (setup.py): started 2022-05-13T00:01:45,610 Destination directory: /tmp/pip-wheel-rk2whwsi 2022-05-13T00:01:45,611 Running command python setup.py bdist_wheel 2022-05-13T00:01:48,036 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing 'v0.0.1-alpha4' to '0.0.1a4' 2022-05-13T00:01:48,037 warnings.warn(tmpl.format(**locals())) 2022-05-13T00:01:48,106 running bdist_wheel 2022-05-13T00:01:48,116 running build 2022-05-13T00:01:48,117 running build_py 2022-05-13T00:01:48,126 creating build 2022-05-13T00:01:48,127 creating build/lib 2022-05-13T00:01:48,128 creating build/lib/ageas 2022-05-13T00:01:48,130 copying ageas/__init__.py -> build/lib/ageas 2022-05-13T00:01:48,134 copying ageas/main.py -> build/lib/ageas 2022-05-13T00:01:48,140 creating build/lib/ageas/database_setup 2022-05-13T00:01:48,142 copying ageas/database_setup/__init__.py -> build/lib/ageas/database_setup 2022-05-13T00:01:48,145 copying ageas/database_setup/binary_class.py -> build/lib/ageas/database_setup 2022-05-13T00:01:48,151 creating build/lib/ageas/tool 2022-05-13T00:01:48,153 copying ageas/tool/grn.py -> build/lib/ageas/tool 2022-05-13T00:01:48,203 copying ageas/tool/__init__.py -> build/lib/ageas/tool 2022-05-13T00:01:48,207 copying ageas/tool/gem.py -> build/lib/ageas/tool 2022-05-13T00:01:48,210 copying ageas/tool/atac_peaks.py -> build/lib/ageas/tool 2022-05-13T00:01:48,214 copying ageas/tool/json.py -> build/lib/ageas/tool 2022-05-13T00:01:48,217 copying ageas/tool/uniprot_id_map.py -> build/lib/ageas/tool 2022-05-13T00:01:48,220 copying ageas/tool/grtd.py -> build/lib/ageas/tool 2022-05-13T00:01:48,223 copying ageas/tool/transfac.py -> build/lib/ageas/tool 2022-05-13T00:01:48,227 copying ageas/tool/biogrid.py -> build/lib/ageas/tool 2022-05-13T00:01:48,232 creating build/lib/ageas/lib 2022-05-13T00:01:48,233 copying ageas/lib/__init__.py -> build/lib/ageas/lib 2022-05-13T00:01:48,237 copying ageas/lib/gem_db_loader.py -> build/lib/ageas/lib 2022-05-13T00:01:48,241 copying ageas/lib/trainer.py -> build/lib/ageas/lib 2022-05-13T00:01:48,245 copying ageas/lib/grn_guidance.py -> build/lib/ageas/lib 2022-05-13T00:01:48,248 copying ageas/lib/config_maker.py -> build/lib/ageas/lib 2022-05-13T00:01:48,253 copying ageas/lib/model_interpreter.py -> build/lib/ageas/lib 2022-05-13T00:01:48,257 copying ageas/lib/deg_finder.py -> build/lib/ageas/lib 2022-05-13T00:01:48,260 copying ageas/lib/pcgrn_caster.py -> build/lib/ageas/lib 2022-05-13T00:01:48,264 copying ageas/lib/grp_predictor.py -> build/lib/ageas/lib 2022-05-13T00:01:48,268 copying ageas/lib/reporter.py -> build/lib/ageas/lib 2022-05-13T00:01:48,271 copying ageas/lib/feature_extractor.py -> build/lib/ageas/lib 2022-05-13T00:01:48,276 creating build/lib/ageas/opt 2022-05-13T00:01:48,277 copying ageas/opt/__init__.py -> build/lib/ageas/opt 2022-05-13T00:01:48,282 creating build/lib/ageas/classifier 2022-05-13T00:01:48,283 copying ageas/classifier/xgb.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,300 copying ageas/classifier/gru.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,304 copying ageas/classifier/svm.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,306 copying ageas/classifier/gnb.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,309 copying ageas/classifier/__init__.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,313 copying ageas/classifier/lstm.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,316 copying ageas/classifier/cnn_1d.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,320 copying ageas/classifier/cnn_hybrid.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,324 copying ageas/classifier/rfc.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,326 copying ageas/classifier/rnn.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,329 copying ageas/classifier/logit.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,332 copying ageas/classifier/transformer.py -> build/lib/ageas/classifier 2022-05-13T00:01:48,335 running egg_info 2022-05-13T00:01:48,412 warning: no files found matching 'CODE_OF_CONDUCT.md' 2022-05-13T00:01:48,432 writing manifest file 'Ageas.egg-info/SOURCES.txt' 2022-05-13T00:01:48,443 creating build/lib/ageas/data 2022-05-13T00:01:48,443 creating build/lib/ageas/data/config 2022-05-13T00:01:48,445 copying ageas/data/config/list_config.js -> build/lib/ageas/data/config 2022-05-13T00:01:48,449 copying ageas/data/config/long_list_config.js -> build/lib/ageas/data/config 2022-05-13T00:01:48,453 copying ageas/data/config/sample_config.js -> build/lib/ageas/data/config 2022-05-13T00:01:48,460 creating build/lib/ageas/data/mouse 2022-05-13T00:01:48,461 copying ageas/data/mouse/ENS2UniID.js.gz -> build/lib/ageas/data/mouse 2022-05-13T00:01:48,489 copying ageas/data/mouse/GSName2UniID.js.gz -> build/lib/ageas/data/mouse 2022-05-13T00:01:48,521 copying ageas/data/mouse/Tranfac201803_MotifTFsF.txt -> build/lib/ageas/data/mouse 2022-05-13T00:01:48,539 copying ageas/data/mouse/bioGRiD_stratified.js.gz -> build/lib/ageas/data/mouse 2022-05-13T00:01:48,573 copying ageas/data/mouse/wholeGene.js.gz -> build/lib/ageas/data/mouse 2022-05-13T00:01:50,536 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-05-13T00:01:50,537 setuptools.SetuptoolsDeprecationWarning, 2022-05-13T00:01:50,542 running install 2022-05-13T00:01:50,604 running install_lib 2022-05-13T00:01:50,611 creating build/bdist.linux-armv7l 2022-05-13T00:01:50,612 creating build/bdist.linux-armv7l/wheel 2022-05-13T00:01:50,615 creating build/bdist.linux-armv7l/wheel/ageas 2022-05-13T00:01:50,625 creating build/bdist.linux-armv7l/wheel/ageas/database_setup 2022-05-13T00:01:50,634 creating build/bdist.linux-armv7l/wheel/ageas/tool 2022-05-13T00:01:50,666 creating build/bdist.linux-armv7l/wheel/ageas/lib 2022-05-13T00:01:50,712 creating build/bdist.linux-armv7l/wheel/ageas/opt 2022-05-13T00:01:50,718 creating build/bdist.linux-armv7l/wheel/ageas/data 2022-05-13T00:01:50,721 creating build/bdist.linux-armv7l/wheel/ageas/data/mouse 2022-05-13T00:01:54,874 creating build/bdist.linux-armv7l/wheel/ageas/data/config 2022-05-13T00:01:54,892 creating build/bdist.linux-armv7l/wheel/ageas/classifier 2022-05-13T00:01:54,933 running install_egg_info 2022-05-13T00:01:54,949 Copying Ageas.egg-info to build/bdist.linux-armv7l/wheel/Ageas-0.0.1a4-py3.7.egg-info 2022-05-13T00:01:54,966 running install_scripts 2022-05-13T00:02:12,401 Building wheel for ageas (setup.py): finished with status 'done' 2022-05-13T00:02:14,035 Created wheel for ageas: filename=Ageas-0.0.1a4-py3-none-any.whl size=55442996 sha256=9457e4c291c39bd761de5014b7172b80d3410749d11eae1ce1c8c121975ab6ed 2022-05-13T00:02:14,037 Stored in directory: /tmp/pip-ephem-wheel-cache-gf31dox6/wheels/4b/b7/b5/8ccc215deaa2fa47ce22fa4e9e02f4ab06a83a2a5e94175c3d 2022-05-13T00:02:14,127 Successfully built ageas 2022-05-13T00:02:17,514 Removed build tracker: '/tmp/pip-req-tracker-78uxlub4'