2022-05-13T22:11:57,030 Created temporary directory: /tmp/pip-ephem-wheel-cache-h2q6hyy1 2022-05-13T22:11:57,036 Created temporary directory: /tmp/pip-req-tracker-xyz7dxrr 2022-05-13T22:11:57,036 Initialized build tracking at /tmp/pip-req-tracker-xyz7dxrr 2022-05-13T22:11:57,037 Created build tracker: /tmp/pip-req-tracker-xyz7dxrr 2022-05-13T22:11:57,037 Entered build tracker: /tmp/pip-req-tracker-xyz7dxrr 2022-05-13T22:11:57,038 Created temporary directory: /tmp/pip-wheel-fkijy08m 2022-05-13T22:11:57,102 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-05-13T22:11:57,111 2 location(s) to search for versions of surfa: 2022-05-13T22:11:57,111 * https://pypi.org/simple/surfa/ 2022-05-13T22:11:57,111 * https://www.piwheels.org/simple/surfa/ 2022-05-13T22:11:57,112 Fetching project page and analyzing links: https://pypi.org/simple/surfa/ 2022-05-13T22:11:57,113 Getting page https://pypi.org/simple/surfa/ 2022-05-13T22:11:57,116 Found index url https://pypi.org/simple 2022-05-13T22:11:57,227 Found link https://files.pythonhosted.org/packages/37/24/6b2b2b2ad1948e97be4f47e9d767a6e8de5df1571e7d1895b901bd351c49/surfa-0.0.6.tar.gz#sha256=ae4a762fa0fcb7f351d63bcf4aa0b4deffa548c7720c234a5a075c3567d4c570 (from https://pypi.org/simple/surfa/) (requires-python:>=3.5), version: 0.0.6 2022-05-13T22:11:57,229 Found link https://files.pythonhosted.org/packages/ea/26/1e59fef4b2007ed0ea896ff2317e4854f2bead49a02a5a0e1c4a4269ac08/surfa-0.0.7.tar.gz#sha256=0981067f70635fca2cf67de75493eefeb80911edd856757602bf35934bd977d6 (from https://pypi.org/simple/surfa/) (requires-python:>=3.5), version: 0.0.7 2022-05-13T22:11:57,230 Fetching project page and analyzing links: https://www.piwheels.org/simple/surfa/ 2022-05-13T22:11:57,231 Getting page https://www.piwheels.org/simple/surfa/ 2022-05-13T22:11:57,233 Found index url https://www.piwheels.org/simple 2022-05-13T22:11:57,450 Skipping link: No binaries permitted for surfa: https://www.piwheels.org/simple/surfa/surfa-0.0.7-cp37-cp37m-linux_armv7l.whl#sha256=e639fd36fafbe32f686e13b8a5be4e9d8bdf2445ddbcffda556d7084e3e54372 (from https://www.piwheels.org/simple/surfa/) (requires-python:>=3.5) 2022-05-13T22:11:57,451 Skipping link: No binaries permitted for surfa: https://www.piwheels.org/simple/surfa/surfa-0.0.7-cp37-cp37m-linux_armv6l.whl#sha256=e639fd36fafbe32f686e13b8a5be4e9d8bdf2445ddbcffda556d7084e3e54372 (from https://www.piwheels.org/simple/surfa/) (requires-python:>=3.5) 2022-05-13T22:11:57,452 Skipping link: No binaries permitted for surfa: https://www.piwheels.org/simple/surfa/surfa-0.0.6-cp39-cp39-linux_armv7l.whl#sha256=bde9afc72dc8f3f49064b3bb546b64ee89caa669a444481cb670a5fb13c38150 (from https://www.piwheels.org/simple/surfa/) (requires-python:>=3.5) 2022-05-13T22:11:57,452 Skipping link: No binaries permitted for surfa: https://www.piwheels.org/simple/surfa/surfa-0.0.6-cp39-cp39-linux_armv6l.whl#sha256=bde9afc72dc8f3f49064b3bb546b64ee89caa669a444481cb670a5fb13c38150 (from https://www.piwheels.org/simple/surfa/) (requires-python:>=3.5) 2022-05-13T22:11:57,453 Skipping link: No binaries permitted for surfa: https://www.piwheels.org/simple/surfa/surfa-0.0.6-cp37-cp37m-linux_armv7l.whl#sha256=2539170b6e57295ed16496992a0f44f3dd9cdb87a158e9e1e0e13abf71503ec6 (from https://www.piwheels.org/simple/surfa/) (requires-python:>=3.5) 2022-05-13T22:11:57,453 Skipping link: No binaries permitted for surfa: https://www.piwheels.org/simple/surfa/surfa-0.0.6-cp37-cp37m-linux_armv6l.whl#sha256=2539170b6e57295ed16496992a0f44f3dd9cdb87a158e9e1e0e13abf71503ec6 (from https://www.piwheels.org/simple/surfa/) (requires-python:>=3.5) 2022-05-13T22:11:57,454 Skipping link: not a file: https://www.piwheels.org/simple/surfa/ 2022-05-13T22:11:57,454 Skipping link: not a file: https://pypi.org/simple/surfa/ 2022-05-13T22:11:57,499 Given no hashes to check 1 links for project 'surfa': discarding no candidates 2022-05-13T22:11:57,541 Collecting surfa==0.0.7 2022-05-13T22:11:57,545 Created temporary directory: /tmp/pip-unpack-m8abxpb0 2022-05-13T22:11:57,715 Downloading surfa-0.0.7.tar.gz (421 kB) 2022-05-13T22:11:58,297 Added surfa==0.0.7 from https://files.pythonhosted.org/packages/ea/26/1e59fef4b2007ed0ea896ff2317e4854f2bead49a02a5a0e1c4a4269ac08/surfa-0.0.7.tar.gz#sha256=0981067f70635fca2cf67de75493eefeb80911edd856757602bf35934bd977d6 to build tracker '/tmp/pip-req-tracker-xyz7dxrr' 2022-05-13T22:11:58,299 Running setup.py (path:/tmp/pip-wheel-fkijy08m/surfa_7ccd5391131149a4965422b494251509/setup.py) egg_info for package surfa 2022-05-13T22:11:58,300 Created temporary directory: /tmp/pip-pip-egg-info-51n2lia0 2022-05-13T22:11:58,301 Preparing metadata (setup.py): started 2022-05-13T22:11:58,303 Running command python setup.py egg_info 2022-05-13T22:12:02,536 running egg_info 2022-05-13T22:12:02,541 creating /tmp/pip-pip-egg-info-51n2lia0/surfa.egg-info 2022-05-13T22:12:02,553 writing manifest file '/tmp/pip-pip-egg-info-51n2lia0/surfa.egg-info/SOURCES.txt' 2022-05-13T22:12:02,600 writing manifest file '/tmp/pip-pip-egg-info-51n2lia0/surfa.egg-info/SOURCES.txt' 2022-05-13T22:12:02,847 Preparing metadata (setup.py): finished with status 'done' 2022-05-13T22:12:02,857 Source in /tmp/pip-wheel-fkijy08m/surfa_7ccd5391131149a4965422b494251509 has version 0.0.7, which satisfies requirement surfa==0.0.7 from https://files.pythonhosted.org/packages/ea/26/1e59fef4b2007ed0ea896ff2317e4854f2bead49a02a5a0e1c4a4269ac08/surfa-0.0.7.tar.gz#sha256=0981067f70635fca2cf67de75493eefeb80911edd856757602bf35934bd977d6 2022-05-13T22:12:02,859 Removed surfa==0.0.7 from https://files.pythonhosted.org/packages/ea/26/1e59fef4b2007ed0ea896ff2317e4854f2bead49a02a5a0e1c4a4269ac08/surfa-0.0.7.tar.gz#sha256=0981067f70635fca2cf67de75493eefeb80911edd856757602bf35934bd977d6 from build tracker '/tmp/pip-req-tracker-xyz7dxrr' 2022-05-13T22:12:02,871 Created temporary directory: /tmp/pip-unpack-et83yuya 2022-05-13T22:12:02,873 Building wheels for collected packages: surfa 2022-05-13T22:12:02,882 Created temporary directory: /tmp/pip-wheel-yq78n_9u 2022-05-13T22:12:02,883 Building wheel for surfa (setup.py): started 2022-05-13T22:12:02,884 Destination directory: /tmp/pip-wheel-yq78n_9u 2022-05-13T22:12:02,885 Running command python setup.py bdist_wheel 2022-05-13T22:12:07,073 running bdist_wheel 2022-05-13T22:12:07,082 running build 2022-05-13T22:12:07,083 running build_py 2022-05-13T22:12:07,090 creating build 2022-05-13T22:12:07,091 creating build/lib.linux-armv7l-3.9 2022-05-13T22:12:07,092 creating build/lib.linux-armv7l-3.9/surfa 2022-05-13T22:12:07,093 copying surfa/system.py -> build/lib.linux-armv7l-3.9/surfa 2022-05-13T22:12:07,097 copying surfa/__init__.py -> build/lib.linux-armv7l-3.9/surfa 2022-05-13T22:12:07,101 creating build/lib.linux-armv7l-3.9/surfa/core 2022-05-13T22:12:07,103 copying surfa/core/labels.py -> build/lib.linux-armv7l-3.9/surfa/core 2022-05-13T22:12:07,107 copying surfa/core/framed.py -> build/lib.linux-armv7l-3.9/surfa/core 2022-05-13T22:12:07,111 copying surfa/core/__init__.py -> build/lib.linux-armv7l-3.9/surfa/core 2022-05-13T22:12:07,114 copying surfa/core/array.py -> build/lib.linux-armv7l-3.9/surfa/core 2022-05-13T22:12:07,119 creating build/lib.linux-armv7l-3.9/surfa/transform 2022-05-13T22:12:07,120 copying surfa/transform/orientation.py -> build/lib.linux-armv7l-3.9/surfa/transform 2022-05-13T22:12:07,124 copying surfa/transform/affine.py -> build/lib.linux-armv7l-3.9/surfa/transform 2022-05-13T22:12:07,128 copying surfa/transform/space.py -> build/lib.linux-armv7l-3.9/surfa/transform 2022-05-13T22:12:07,132 copying surfa/transform/__init__.py -> build/lib.linux-armv7l-3.9/surfa/transform 2022-05-13T22:12:07,135 copying surfa/transform/geometry.py -> build/lib.linux-armv7l-3.9/surfa/transform 2022-05-13T22:12:07,140 creating build/lib.linux-armv7l-3.9/surfa/image 2022-05-13T22:12:07,142 copying surfa/image/slicing.py -> build/lib.linux-armv7l-3.9/surfa/image 2022-05-13T22:12:07,145 copying surfa/image/framed.py -> build/lib.linux-armv7l-3.9/surfa/image 2022-05-13T22:12:07,150 copying surfa/image/__init__.py -> build/lib.linux-armv7l-3.9/surfa/image 2022-05-13T22:12:07,154 creating build/lib.linux-armv7l-3.9/surfa/mesh 2022-05-13T22:12:07,155 copying surfa/mesh/overlay.py -> build/lib.linux-armv7l-3.9/surfa/mesh 2022-05-13T22:12:07,158 copying surfa/mesh/mesh.py -> build/lib.linux-armv7l-3.9/surfa/mesh 2022-05-13T22:12:07,162 copying surfa/mesh/__init__.py -> build/lib.linux-armv7l-3.9/surfa/mesh 2022-05-13T22:12:07,166 creating build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,167 copying surfa/io/mesh.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,172 copying surfa/io/fsio.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,175 copying surfa/io/labels.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,178 copying surfa/io/framed.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,183 copying surfa/io/utils.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,187 copying surfa/io/protocol.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,191 copying surfa/io/affine.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,195 copying surfa/io/__init__.py -> build/lib.linux-armv7l-3.9/surfa/io 2022-05-13T22:12:07,199 creating build/lib.linux-armv7l-3.9/surfa/vis 2022-05-13T22:12:07,201 copying surfa/vis/freesurfer.py -> build/lib.linux-armv7l-3.9/surfa/vis 2022-05-13T22:12:07,206 copying surfa/vis/__init__.py -> build/lib.linux-armv7l-3.9/surfa/vis 2022-05-13T22:12:07,215 copying surfa/image/interp.pyx -> build/lib.linux-armv7l-3.9/surfa/image 2022-05-13T22:12:07,228 running build_ext 2022-05-13T22:12:07,241 creating build/temp.linux-armv7l-3.9 2022-05-13T22:12:07,242 creating build/temp.linux-armv7l-3.9/surfa 2022-05-13T22:12:07,243 creating build/temp.linux-armv7l-3.9/surfa/image 2022-05-13T22:12:07,244 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c surfa/image/interp.c -o build/temp.linux-armv7l-3.9/surfa/image/interp.o 2022-05-13T22:12:08,064 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1960, 2022-05-13T22:12:08,064 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-05-13T22:12:08,065 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-05-13T22:12:08,065 from surfa/image/interp.c:700: 2022-05-13T22:12:08,065 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-05-13T22:12:08,066 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-05-13T22:12:08,066 | ^~~~~~~ 2022-05-13T22:14:16,791 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/surfa/image/interp.o -L/usr/lib -o build/lib.linux-armv7l-3.9/surfa/image/interp.cpython-39-arm-linux-gnueabihf.so 2022-05-13T22:14:17,457 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-05-13T22:14:17,458 warnings.warn( 2022-05-13T22:14:17,463 running install 2022-05-13T22:14:17,527 running install_lib 2022-05-13T22:14:17,534 creating build/bdist.linux-armv7l 2022-05-13T22:14:17,535 creating build/bdist.linux-armv7l/wheel 2022-05-13T22:14:17,539 creating build/bdist.linux-armv7l/wheel/surfa 2022-05-13T22:14:17,541 creating build/bdist.linux-armv7l/wheel/surfa/image 2022-05-13T22:14:17,720 creating build/bdist.linux-armv7l/wheel/surfa/core 2022-05-13T22:14:17,736 creating build/bdist.linux-armv7l/wheel/surfa/io 2022-05-13T22:14:17,765 creating build/bdist.linux-armv7l/wheel/surfa/transform 2022-05-13T22:14:17,784 creating build/bdist.linux-armv7l/wheel/surfa/vis 2022-05-13T22:14:17,794 creating build/bdist.linux-armv7l/wheel/surfa/mesh 2022-05-13T22:14:17,811 running install_egg_info 2022-05-13T22:14:17,854 running egg_info 2022-05-13T22:14:17,910 writing manifest file 'surfa.egg-info/SOURCES.txt' 2022-05-13T22:14:17,913 Copying surfa.egg-info to build/bdist.linux-armv7l/wheel/surfa-0.0.7-py3.9.egg-info 2022-05-13T22:14:17,931 running install_scripts 2022-05-13T22:14:19,818 Building wheel for surfa (setup.py): finished with status 'done' 2022-05-13T22:14:19,885 Created wheel for surfa: filename=surfa-0.0.7-cp39-cp39-linux_armv7l.whl size=1038434 sha256=37a3a0d6e781e7d80acb4338c319c3070bde38e046fe6c4553e1d524823d9a91 2022-05-13T22:14:19,887 Stored in directory: /tmp/pip-ephem-wheel-cache-h2q6hyy1/wheels/03/1b/d2/93e39d2b7c02813925902cfd3bd67ec835f7ff0033d51f3567 2022-05-13T22:14:19,911 Successfully built surfa 2022-05-13T22:14:20,001 Removed build tracker: '/tmp/pip-req-tracker-xyz7dxrr'