2022-06-01T02:37:16,201 Created temporary directory: /tmp/pip-ephem-wheel-cache-8gi39ghx 2022-06-01T02:37:16,206 Created temporary directory: /tmp/pip-build-tracker-xiadgsrt 2022-06-01T02:37:16,207 Initialized build tracking at /tmp/pip-build-tracker-xiadgsrt 2022-06-01T02:37:16,207 Created build tracker: /tmp/pip-build-tracker-xiadgsrt 2022-06-01T02:37:16,208 Entered build tracker: /tmp/pip-build-tracker-xiadgsrt 2022-06-01T02:37:16,209 Created temporary directory: /tmp/pip-wheel-h98x1efp 2022-06-01T02:37:16,271 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-01T02:37:16,280 2 location(s) to search for versions of remixt: 2022-06-01T02:37:16,280 * https://pypi.org/simple/remixt/ 2022-06-01T02:37:16,280 * https://www.piwheels.org/simple/remixt/ 2022-06-01T02:37:16,281 Fetching project page and analyzing links: https://pypi.org/simple/remixt/ 2022-06-01T02:37:16,282 Getting page https://pypi.org/simple/remixt/ 2022-06-01T02:37:16,286 Found index url https://pypi.org/simple 2022-06-01T02:37:16,390 Skipping link: No binaries permitted for remixt: https://files.pythonhosted.org/packages/34/47/36474b49522a25ebd0225e8fb14b787d22bd183ec970234f91eaec994c2d/remixt-0.5.6-cp27-cp27m-macosx_10_6_x86_64.whl#sha256=513fca7c1e09623d73497c922296860bf7bd26e129b07602c5a88922492f6a6b (from https://pypi.org/simple/remixt/) 2022-06-01T02:37:16,391 Found link https://files.pythonhosted.org/packages/c2/af/ff31309f6b344064e5ab6078501ce62debe5247ba568c178bbf13c2bcfe3/remixt-0.5.15.tar.gz#sha256=d48827c4182dc018e51bf1ba9a2941b6a620e13a0a3877e54254cf2e48f0d42b (from https://pypi.org/simple/remixt/), version: 0.5.15 2022-06-01T02:37:16,392 Found link https://files.pythonhosted.org/packages/d0/9d/5530963f9b627877ee7822134f924cf2c70dd746ccb8d19f144a9465ab59/remixt-0.5.16.tar.gz#sha256=1cb41ccaf247869fad1dccd529903ffc5d53cef6fc351696d95ed85671257e51 (from https://pypi.org/simple/remixt/), version: 0.5.16 2022-06-01T02:37:16,393 Found link https://files.pythonhosted.org/packages/76/82/68faf5c91c564e4da7b3188d5ea05855adfea3efafcadd5d8e33fc702a15/remixt-0.5.17.tar.gz#sha256=d27b7025a87a145882735dfcd96e2003649bac705aa111f861512808852d1bc6 (from https://pypi.org/simple/remixt/), version: 0.5.17 2022-06-01T02:37:16,393 Found link https://files.pythonhosted.org/packages/01/c9/261ef371a3d445786a7f6b3f9f3a345895f1c88d64afb636b209562bdcae/remixt-0.5.18.tar.gz#sha256=3f2cc6108b705e4e956a867435f15e6ee82270311eeb2a32dfba59e288cc55a8 (from https://pypi.org/simple/remixt/), version: 0.5.18 2022-06-01T02:37:16,394 Found link https://files.pythonhosted.org/packages/7b/b4/93b643bd28690b9bc570d6942cb004b4c46bff97cff8d8361c8daee20578/remixt-0.5.19.tar.gz#sha256=2f810aaba79f49a54bd919f61aea8cd797ea79e5e43d8a3614c279b6263b03e0 (from https://pypi.org/simple/remixt/), version: 0.5.19 2022-06-01T02:37:16,395 Fetching project page and analyzing links: https://www.piwheels.org/simple/remixt/ 2022-06-01T02:37:16,395 Getting page https://www.piwheels.org/simple/remixt/ 2022-06-01T02:37:16,397 Found index url https://www.piwheels.org/simple 2022-06-01T02:37:16,610 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.18-cp39-cp39-linux_armv7l.whl#sha256=fb546786e8656549a6ab10968762152e89a49b6e1dc26d5a6b9b543032257371 (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,611 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.18-cp39-cp39-linux_armv6l.whl#sha256=fb546786e8656549a6ab10968762152e89a49b6e1dc26d5a6b9b543032257371 (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,612 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.18-cp37-cp37m-linux_armv7l.whl#sha256=b2d4f466c700e28c8a587cbe36d82b89ed1346da37279c0bde272f907b25e60b (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,613 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.18-cp37-cp37m-linux_armv6l.whl#sha256=b2d4f466c700e28c8a587cbe36d82b89ed1346da37279c0bde272f907b25e60b (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,614 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.17-cp39-cp39-linux_armv7l.whl#sha256=5d8ddead1293ed5f2791d126875e70556ae30efcd8db3575f987b3356326b3fc (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,614 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.17-cp39-cp39-linux_armv6l.whl#sha256=5d8ddead1293ed5f2791d126875e70556ae30efcd8db3575f987b3356326b3fc (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,615 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.17-cp37-cp37m-linux_armv7l.whl#sha256=ab307de80ba017e40070da36a6953d0340b4890115d11777756b42b918733256 (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,615 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.17-cp37-cp37m-linux_armv6l.whl#sha256=ab307de80ba017e40070da36a6953d0340b4890115d11777756b42b918733256 (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,616 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.16-cp39-cp39-linux_armv7l.whl#sha256=cbf2ef60ea8ec37410b036a8108f06781612924eeeaee0de4ec8872d7e3c603d (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,617 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.16-cp39-cp39-linux_armv6l.whl#sha256=cbf2ef60ea8ec37410b036a8108f06781612924eeeaee0de4ec8872d7e3c603d (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,617 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.16-cp37-cp37m-linux_armv7l.whl#sha256=707a3cc329b5fd96fea972a934f0a1dbf0c74d5768b056c49ccb3dc845a6321c (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,617 Skipping link: No binaries permitted for remixt: https://www.piwheels.org/simple/remixt/remixt-0.5.16-cp37-cp37m-linux_armv6l.whl#sha256=707a3cc329b5fd96fea972a934f0a1dbf0c74d5768b056c49ccb3dc845a6321c (from https://www.piwheels.org/simple/remixt/) 2022-06-01T02:37:16,618 Skipping link: not a file: https://www.piwheels.org/simple/remixt/ 2022-06-01T02:37:16,619 Skipping link: not a file: https://pypi.org/simple/remixt/ 2022-06-01T02:37:16,654 Given no hashes to check 1 links for project 'remixt': discarding no candidates 2022-06-01T02:37:16,685 Collecting remixt==0.5.19 2022-06-01T02:37:16,690 Created temporary directory: /tmp/pip-unpack-0dwce_0j 2022-06-01T02:37:16,784 Downloading remixt-0.5.19.tar.gz (894 kB) 2022-06-01T02:37:18,447 Added remixt==0.5.19 from https://files.pythonhosted.org/packages/7b/b4/93b643bd28690b9bc570d6942cb004b4c46bff97cff8d8361c8daee20578/remixt-0.5.19.tar.gz#sha256=2f810aaba79f49a54bd919f61aea8cd797ea79e5e43d8a3614c279b6263b03e0 to build tracker '/tmp/pip-build-tracker-xiadgsrt' 2022-06-01T02:37:18,450 Running setup.py (path:/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/setup.py) egg_info for package remixt 2022-06-01T02:37:18,452 Created temporary directory: /tmp/pip-pip-egg-info-wl6ru90o 2022-06-01T02:37:18,452 Preparing metadata (setup.py): started 2022-06-01T02:37:18,455 Running command python setup.py egg_info 2022-06-01T03:08:11,800 running egg_info 2022-06-01T03:08:11,805 creating /tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info 2022-06-01T03:08:12,474 writing /tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/PKG-INFO 2022-06-01T03:08:13,071 writing dependency_links to /tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/dependency_links.txt 2022-06-01T03:08:14,878 writing entry points to /tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/entry_points.txt 2022-06-01T03:08:16,081 writing requirements to /tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/requires.txt 2022-06-01T03:08:16,675 writing top-level names to /tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/top_level.txt 2022-06-01T03:08:16,678 writing manifest file '/tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/SOURCES.txt' 2022-06-01T03:08:18,155 reading manifest file '/tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/SOURCES.txt' 2022-06-01T03:08:18,159 reading manifest template 'MANIFEST.in' 2022-06-01T03:08:18,252 writing manifest file '/tmp/pip-pip-egg-info-wl6ru90o/remixt.egg-info/SOURCES.txt' 2022-06-01T03:08:18,255 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-06-01T03:08:18,256 % (opt, underscore_opt) 2022-06-01T03:08:18,256 /usr/local/lib/python3.7/dist-packages/setuptools/installer.py:30: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. 2022-06-01T03:08:18,257 SetuptoolsDeprecationWarning, 2022-06-01T03:08:18,257 /usr/local/lib/python3.7/dist-packages/setuptools/command/egg_info.py:637: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. 2022-06-01T03:08:18,257 Please extend command classes from setuptools instead of distutils. 2022-06-01T03:08:18,258 SetuptoolsDeprecationWarning 2022-06-01T03:08:18,490 Preparing metadata (setup.py): finished with status 'done' 2022-06-01T03:08:18,501 Source in /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab has version 0.5.19, which satisfies requirement remixt==0.5.19 from https://files.pythonhosted.org/packages/7b/b4/93b643bd28690b9bc570d6942cb004b4c46bff97cff8d8361c8daee20578/remixt-0.5.19.tar.gz#sha256=2f810aaba79f49a54bd919f61aea8cd797ea79e5e43d8a3614c279b6263b03e0 2022-06-01T03:08:18,503 Removed remixt==0.5.19 from https://files.pythonhosted.org/packages/7b/b4/93b643bd28690b9bc570d6942cb004b4c46bff97cff8d8361c8daee20578/remixt-0.5.19.tar.gz#sha256=2f810aaba79f49a54bd919f61aea8cd797ea79e5e43d8a3614c279b6263b03e0 from build tracker '/tmp/pip-build-tracker-xiadgsrt' 2022-06-01T03:08:18,511 Created temporary directory: /tmp/pip-unpack-n7zbyg5y 2022-06-01T03:08:18,512 Building wheels for collected packages: remixt 2022-06-01T03:08:18,522 Created temporary directory: /tmp/pip-wheel-aza9qtpu 2022-06-01T03:08:18,522 Building wheel for remixt (setup.py): started 2022-06-01T03:08:18,525 Destination directory: /tmp/pip-wheel-aza9qtpu 2022-06-01T03:08:18,525 Running command python setup.py bdist_wheel 2022-06-01T03:08:20,618 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-06-01T03:08:20,619 % (opt, underscore_opt) 2022-06-01T03:08:21,043 /usr/local/lib/python3.7/dist-packages/setuptools/installer.py:30: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. 2022-06-01T03:08:21,044 SetuptoolsDeprecationWarning, 2022-06-01T03:08:25,276 running bdist_wheel 2022-06-01T03:08:25,446 running build 2022-06-01T03:08:25,447 running build_py 2022-06-01T03:08:25,460 creating build 2022-06-01T03:08:25,461 creating build/lib.linux-armv7l-cpython-37 2022-06-01T03:08:25,462 creating build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,464 copying remixt/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,468 copying remixt/ref_data.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,471 copying remixt/defaults.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,475 copying remixt/likelihood.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,481 copying remixt/visualize.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,486 copying remixt/workflow.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,490 copying remixt/cn_model.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,496 copying remixt/segalg.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,500 copying remixt/seqdataio.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,504 copying remixt/utils.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,508 copying remixt/cn_plot.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,513 copying remixt/config.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,516 copying remixt/_version.py -> build/lib.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:25,520 creating build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,522 copying remixt/tests/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,525 copying remixt/tests/test_likelihood.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,529 copying remixt/tests/test_remixt.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,533 copying remixt/tests/test_segalg.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,537 copying remixt/tests/test_model.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,541 copying remixt/tests/utils.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,545 copying remixt/tests/test_seqdata.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,548 copying remixt/tests/test_haplotype.py -> build/lib.linux-armv7l-cpython-37/remixt/tests 2022-06-01T03:08:25,552 creating build/lib.linux-armv7l-cpython-37/remixt/mappability 2022-06-01T03:08:25,553 copying remixt/mappability/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/mappability 2022-06-01T03:08:25,556 copying remixt/mappability/tasks.py -> build/lib.linux-armv7l-cpython-37/remixt/mappability 2022-06-01T03:08:25,561 creating build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,563 copying remixt/analysis/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,566 copying remixt/analysis/breakpoints.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,569 copying remixt/analysis/segment.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,573 copying remixt/analysis/pipeline.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,577 copying remixt/analysis/temp.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,580 copying remixt/analysis/haplotype.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,585 copying remixt/analysis/readdepth.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,589 copying remixt/analysis/experiment.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,593 copying remixt/analysis/readcount.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,596 copying remixt/analysis/gcbias.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,601 copying remixt/analysis/stats.py -> build/lib.linux-armv7l-cpython-37/remixt/analysis 2022-06-01T03:08:25,606 creating build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,607 copying remixt/simulations/balanced.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,610 copying remixt/simulations/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,613 copying remixt/simulations/pipeline.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,618 copying remixt/simulations/seqread.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,622 copying remixt/simulations/workflow.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,626 copying remixt/simulations/simple.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,629 copying remixt/simulations/haplotype.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,632 copying remixt/simulations/experiment.py -> build/lib.linux-armv7l-cpython-37/remixt/simulations 2022-06-01T03:08:25,640 creating build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,642 copying remixt/wrappers/cmdline.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,645 copying remixt/wrappers/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,648 copying remixt/wrappers/wraptheta.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,652 copying remixt/wrappers/wrapremixt.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,657 copying remixt/wrappers/utils.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,660 copying remixt/wrappers/wraptitan.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,664 copying remixt/wrappers/wrapclonehd.py -> build/lib.linux-armv7l-cpython-37/remixt/wrappers 2022-06-01T03:08:25,670 creating build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,672 copying remixt/ui/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,675 copying remixt/ui/visualize_solutions.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,678 copying remixt/ui/run.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,681 copying remixt/ui/mappability_bwa.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,684 copying remixt/ui/create_ref_data.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,687 copying remixt/ui/main.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,690 copying remixt/ui/plot_results.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,693 copying remixt/ui/write_results.py -> build/lib.linux-armv7l-cpython-37/remixt/ui 2022-06-01T03:08:25,698 creating build/lib.linux-armv7l-cpython-37/remixt/tests/unopt 2022-06-01T03:08:25,699 copying remixt/tests/unopt/model.py -> build/lib.linux-armv7l-cpython-37/remixt/tests/unopt 2022-06-01T03:08:25,703 copying remixt/tests/unopt/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/tests/unopt 2022-06-01T03:08:25,707 creating build/lib.linux-armv7l-cpython-37/remixt/mappability/bwa 2022-06-01T03:08:25,709 copying remixt/mappability/bwa/__init__.py -> build/lib.linux-armv7l-cpython-37/remixt/mappability/bwa 2022-06-01T03:08:25,712 copying remixt/mappability/bwa/workflow.py -> build/lib.linux-armv7l-cpython-37/remixt/mappability/bwa 2022-06-01T03:08:25,729 UPDATING build/lib.linux-armv7l-cpython-37/remixt/_version.py 2022-06-01T03:08:25,731 set build/lib.linux-armv7l-cpython-37/remixt/_version.py to '0.5.19' 2022-06-01T03:08:25,732 running build_ext 2022-06-01T03:08:26,855 skipping 'remixt/bamreader.cpp' Cython extension (up-to-date) 2022-06-01T03:08:26,856 skipping 'remixt/bpmodel.cpp' Cython extension (up-to-date) 2022-06-01T03:08:26,857 building 'remixt.bamreader' extension 2022-06-01T03:08:29,028 creating build/temp.linux-armv7l-cpython-37 2022-06-01T03:08:29,029 creating build/temp.linux-armv7l-cpython-37/remixt 2022-06-01T03:08:29,031 creating build/temp.linux-armv7l-cpython-37/src 2022-06-01T03:08:29,032 creating build/temp.linux-armv7l-cpython-37/src/external 2022-06-01T03:08:29,033 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools 2022-06-01T03:08:29,034 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src 2022-06-01T03:08:29,035 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api 2022-06-01T03:08:29,039 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal 2022-06-01T03:08:29,039 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam 2022-06-01T03:08:29,042 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index 2022-06-01T03:08:29,043 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io 2022-06-01T03:08:29,046 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam 2022-06-01T03:08:29,047 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/utils 2022-06-01T03:08:29,049 creating build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils 2022-06-01T03:08:29,050 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c remixt/bamreader.cpp -o build/temp.linux-armv7l-cpython-37/remixt/bamreader.o -g 2022-06-01T03:08:30,503 In file included from /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/ndarraytypes.h:1822, 2022-06-01T03:08:30,504 from /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/ndarrayobject.h:12, 2022-06-01T03:08:30,505 from /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/arrayobject.h:4, 2022-06-01T03:08:30,505 from remixt/bamreader.cpp:624: 2022-06-01T03:08:30,505 /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-06-01T03:08:30,506 #warning "Using deprecated NumPy API, disable it with " \ 2022-06-01T03:08:30,506 ^~~~~~~ 2022-06-01T03:08:34,260 remixt/bamreader.cpp: In function ‘PyObject* __pyx_pf_6remixt_9bamreader_12AlleleReader_6GetFragmentTable(__pyx_obj_6remixt_9bamreader_AlleleReader*)’: 2022-06-01T03:08:34,261 remixt/bamreader.cpp:2551:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-01T03:08:34,261 for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) { 2022-06-01T03:08:34,262 ~~~~~~~~~~^~~~~~~~~~~ 2022-06-01T03:08:34,308 remixt/bamreader.cpp: In function ‘PyObject* __pyx_pf_6remixt_9bamreader_12AlleleReader_8GetAlleleTable(__pyx_obj_6remixt_9bamreader_AlleleReader*)’: 2022-06-01T03:08:34,309 remixt/bamreader.cpp:2783:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-01T03:08:34,309 for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) { 2022-06-01T03:08:34,310 ~~~~~~~~~~^~~~~~~~~~~ 2022-06-01T03:08:46,716 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/BamAlleleReader.cpp -o build/temp.linux-armv7l-cpython-37/src/BamAlleleReader.o -g 2022-06-01T03:08:49,984 In file included from src/BamAlleleReader.cpp:1: 2022-06-01T03:08:49,984 src/BamAlleleReader.h: In constructor ‘AlleleReader::AlleleReader(const string&, const string&, const string&, int, int, bool)’: 2022-06-01T03:08:49,985 src/BamAlleleReader.h:98:6: warning: ‘AlleleReader::mNextFragmentID’ will be initialized after [-Wreorder] 2022-06-01T03:08:49,985 int mNextFragmentID; 2022-06-01T03:08:49,986 ^~~~~~~~~~~~~~~ 2022-06-01T03:08:49,986 src/BamAlleleReader.h:90:7: warning: ‘bool AlleleReader::mCheckProperPair’ [-Wreorder] 2022-06-01T03:08:49,986 bool mCheckProperPair; 2022-06-01T03:08:49,987 ^~~~~~~~~~~~~~~~ 2022-06-01T03:08:49,987 src/BamAlleleReader.cpp:62:1: warning: when initialized here [-Wreorder] 2022-06-01T03:08:49,988 AlleleReader::AlleleReader(const string& bamFilename, 2022-06-01T03:08:49,988 ^~~~~~~~~~~~ 2022-06-01T03:09:02,300 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/BamAlignment.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamAlignment.o -g 2022-06-01T03:09:09,753 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/BamMultiReader.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamMultiReader.o -g 2022-06-01T03:09:14,504 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/BamReader.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamReader.o -g 2022-06-01T03:09:18,568 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/BamWriter.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamWriter.o -g 2022-06-01T03:09:22,201 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamHeader.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamHeader.o -g 2022-06-01T03:09:27,903 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamProgram.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamProgram.o -g 2022-06-01T03:09:30,491 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamProgramChain.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamProgramChain.o -g 2022-06-01T03:09:34,853 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamReadGroup.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamReadGroup.o -g 2022-06-01T03:09:38,157 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamReadGroupDictionary.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamReadGroupDictionary.o -g 2022-06-01T03:09:45,031 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamSequence.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamSequence.o -g 2022-06-01T03:09:49,191 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/SamSequenceDictionary.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamSequenceDictionary.o -g 2022-06-01T03:09:56,217 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/bam/BamHeader_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamHeader_p.o -g 2022-06-01T03:10:00,670 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/bam/BamMultiReader_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamMultiReader_p.o -g 2022-06-01T03:10:20,225 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/bam/BamRandomAccessController_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamRandomAccessController_p.o -g 2022-06-01T03:10:26,958 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/bam/BamReader_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamReader_p.o -g 2022-06-01T03:10:37,370 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/bam/BamWriter_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamWriter_p.o -g 2022-06-01T03:10:43,180 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/index/BamIndexFactory_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index/BamIndexFactory_p.o -g 2022-06-01T03:10:47,352 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/index/BamStandardIndex_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index/BamStandardIndex_p.o -g 2022-06-01T03:11:05,708 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/index/BamToolsIndex_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index/BamToolsIndex_p.o -g 2022-06-01T03:11:16,224 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/BamDeviceFactory_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamDeviceFactory_p.o -g 2022-06-01T03:11:18,470 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/BamFile_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamFile_p.o -g 2022-06-01T03:11:22,107 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/BamFtp_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamFtp_p.o -g 2022-06-01T03:11:32,697 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/BamHttp_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamHttp_p.o -g 2022-06-01T03:11:44,773 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/BamPipe_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamPipe_p.o -g 2022-06-01T03:11:48,490 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/BgzfStream_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BgzfStream_p.o -g 2022-06-01T03:11:55,854 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/ByteArray_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/ByteArray_p.o -g 2022-06-01T03:11:59,578 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/HostAddress_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/HostAddress_p.o -g 2022-06-01T03:12:01,512 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp: In member function ‘bool BamTools::Internal::HostAddress::operator<(const BamTools::Internal::HostAddress&) const’: 2022-06-01T03:12:01,512 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp:266:33: warning: self-comparison always evaluates to false [-Wtautological-compare] 2022-06-01T03:12:01,513 return m_ip4Address < m_ip4Address; 2022-06-01T03:12:01,513 ~~~~~~~~~~~~~^~~~~~~~~~~~~~ 2022-06-01T03:12:01,515 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp: In member function ‘void BamTools::Internal::HostAddress::Clear()’: 2022-06-01T03:12:01,515 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp:283:49: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct BamTools::Internal::IPv6Address’; use assignment or value-initialization instead [-Wclass-memaccess] 2022-06-01T03:12:01,516 memset(&m_ip6Address, 0, sizeof(IPv6Address)); 2022-06-01T03:12:01,516 ^ 2022-06-01T03:12:01,516 In file included from src/external/bamtools/src/api/internal/io/HostAddress_p.cpp:10: 2022-06-01T03:12:01,517 src/external/bamtools/src/api/internal/io/HostAddress_p.h:30:8: note: ‘struct BamTools::Internal::IPv6Address’ declared here 2022-06-01T03:12:01,517 struct IPv6Address { 2022-06-01T03:12:01,518 ^~~~~~~~~~~ 2022-06-01T03:12:01,529 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp: In member function ‘std::__cxx11::string BamTools::Internal::HostAddress::GetIPString() const’: 2022-06-01T03:12:01,530 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp:325:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2022-06-01T03:12:01,530 if ( i != 0 ) 2022-06-01T03:12:01,531 ^~ 2022-06-01T03:12:01,531 src/external/bamtools/src/api/internal/io/HostAddress_p.cpp:327:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2022-06-01T03:12:01,532 ss << hex << ( (uint16_t(m_ip6Address[2*i]) << 8) | 2022-06-01T03:12:01,532 ^~ 2022-06-01T03:12:05,838 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/HostInfo_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/HostInfo_p.o -g 2022-06-01T03:12:10,985 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/HttpHeader_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/HttpHeader_p.o -g 2022-06-01T03:12:20,869 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/ILocalIODevice_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/ILocalIODevice_p.o -g 2022-06-01T03:12:22,881 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/RollingBuffer_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/RollingBuffer_p.o -g 2022-06-01T03:12:28,374 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/TcpSocketEngine_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/TcpSocketEngine_p.o -g 2022-06-01T03:12:31,080 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/TcpSocketEngine_unix_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/TcpSocketEngine_unix_p.o -g 2022-06-01T03:12:34,320 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/io/TcpSocket_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/TcpSocket_p.o -g 2022-06-01T03:12:40,410 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/sam/SamFormatParser_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam/SamFormatParser_p.o -g 2022-06-01T03:12:48,634 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/sam/SamFormatPrinter_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam/SamFormatPrinter_p.o -g 2022-06-01T03:12:58,406 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/sam/SamHeaderValidator_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam/SamHeaderValidator_p.o -g 2022-06-01T03:13:07,399 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/api/internal/utils/BamException_p.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/utils/BamException_p.o -g 2022-06-01T03:13:09,163 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/utils/bamtools_fasta.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_fasta.o -g 2022-06-01T03:13:19,002 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/utils/bamtools_options.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_options.o -g 2022-06-01T03:13:31,745 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/utils/bamtools_pileup_engine.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_pileup_engine.o -g 2022-06-01T03:13:37,585 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Isrc -Isrc/external -Isrc/external/bamtools/src -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c src/external/bamtools/src/utils/bamtools_utilities.cpp -o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_utilities.o -g 2022-06-01T03:13:45,560 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/remixt/bamreader.o build/temp.linux-armv7l-cpython-37/src/BamAlleleReader.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamAlignment.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamMultiReader.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamReader.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/BamWriter.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamHeader.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamProgram.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamProgramChain.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamReadGroup.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamReadGroupDictionary.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamSequence.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/SamSequenceDictionary.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamHeader_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamMultiReader_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamRandomAccessController_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamReader_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/bam/BamWriter_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index/BamIndexFactory_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index/BamStandardIndex_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/index/BamToolsIndex_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamDeviceFactory_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamFile_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamFtp_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamHttp_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BamPipe_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/BgzfStream_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/ByteArray_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/HostAddress_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/HostInfo_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/HttpHeader_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/ILocalIODevice_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/RollingBuffer_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/TcpSocketEngine_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/TcpSocketEngine_unix_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/io/TcpSocket_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam/SamFormatParser_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam/SamFormatPrinter_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/sam/SamHeaderValidator_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/api/internal/utils/BamException_p.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_fasta.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_options.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_pileup_engine.o build/temp.linux-armv7l-cpython-37/src/external/bamtools/src/utils/bamtools_utilities.o -L/usr/lib -lz -lbz2 -o build/lib.linux-armv7l-cpython-37/remixt/bamreader.cpython-37m-arm-linux-gnueabihf.so -g 2022-06-01T03:15:26,637 building 'remixt.bpmodel' extension 2022-06-01T03:15:26,639 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include -I/usr/include/python3.7m -c remixt/bpmodel.cpp -o build/temp.linux-armv7l-cpython-37/remixt/bpmodel.o -g 2022-06-01T03:15:27,220 In file included from /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/ndarraytypes.h:1822, 2022-06-01T03:15:27,221 from /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/ndarrayobject.h:12, 2022-06-01T03:15:27,221 from /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/arrayobject.h:4, 2022-06-01T03:15:27,222 from remixt/bpmodel.cpp:625: 2022-06-01T03:15:27,222 /tmp/pip-wheel-h98x1efp/remixt_d16eddac48d1490986fda605eb0a2bab/.eggs/numpy-1.19.4-py3.7-linux-armv7l.egg/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-06-01T03:15:27,222 #warning "Using deprecated NumPy API, disable it with " \ 2022-06-01T03:15:27,223 ^~~~~~~ 2022-06-01T03:15:35,116 remixt/bpmodel.cpp:4355:33: warning: ‘__pyx_t_5numpy_float64_t __pyx_f_6remixt_7bpmodel__exp_normalize3(__Pyx_memviewslice, __Pyx_memviewslice)’ defined but not used [-Wunused-function] 2022-06-01T03:15:35,116 static __pyx_t_5numpy_float64_t __pyx_f_6remixt_7bpmodel__exp_normalize3(__Pyx_memviewslice __pyx_v_Y, __Pyx_memviewslice __pyx_v_X) { 2022-06-01T03:15:35,117 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-01T03:15:35,117 remixt/bpmodel.cpp:3442:13: warning: ‘void __pyx_f_6remixt_7bpmodel__argmax2(__Pyx_memviewslice, __Pyx_memviewslice)’ defined but not used [-Wunused-function] 2022-06-01T03:15:35,118 static void __pyx_f_6remixt_7bpmodel__argmax2(__Pyx_memviewslice __pyx_v_values, __Pyx_memviewslice __pyx_v_indices) { 2022-06-01T03:15:35,118 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-01T03:17:02,162 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/remixt/bpmodel.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/remixt/bpmodel.cpython-37m-arm-linux-gnueabihf.so -g 2022-06-01T03:18:18,380 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-06-01T03:18:18,381 setuptools.SetuptoolsDeprecationWarning, 2022-06-01T03:18:19,032 installing to build/bdist.linux-armv7l/wheel 2022-06-01T03:18:19,033 running install 2022-06-01T03:18:19,096 running install_lib 2022-06-01T03:18:19,750 creating build/bdist.linux-armv7l 2022-06-01T03:18:19,751 creating build/bdist.linux-armv7l/wheel 2022-06-01T03:18:19,754 creating build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:19,756 copying build/lib.linux-armv7l-cpython-37/remixt/__init__.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:19,759 copying build/lib.linux-armv7l-cpython-37/remixt/ref_data.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:19,765 creating build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,766 copying build/lib.linux-armv7l-cpython-37/remixt/tests/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,769 copying build/lib.linux-armv7l-cpython-37/remixt/tests/test_likelihood.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,774 copying build/lib.linux-armv7l-cpython-37/remixt/tests/test_remixt.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,779 copying build/lib.linux-armv7l-cpython-37/remixt/tests/test_segalg.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,782 copying build/lib.linux-armv7l-cpython-37/remixt/tests/test_model.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,787 copying build/lib.linux-armv7l-cpython-37/remixt/tests/utils.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,790 copying build/lib.linux-armv7l-cpython-37/remixt/tests/test_seqdata.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,793 copying build/lib.linux-armv7l-cpython-37/remixt/tests/test_haplotype.py -> build/bdist.linux-armv7l/wheel/remixt/tests 2022-06-01T03:18:19,797 creating build/bdist.linux-armv7l/wheel/remixt/tests/unopt 2022-06-01T03:18:19,799 copying build/lib.linux-armv7l-cpython-37/remixt/tests/unopt/model.py -> build/bdist.linux-armv7l/wheel/remixt/tests/unopt 2022-06-01T03:18:19,803 copying build/lib.linux-armv7l-cpython-37/remixt/tests/unopt/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/tests/unopt 2022-06-01T03:18:19,807 creating build/bdist.linux-armv7l/wheel/remixt/mappability 2022-06-01T03:18:19,809 creating build/bdist.linux-armv7l/wheel/remixt/mappability/bwa 2022-06-01T03:18:19,811 copying build/lib.linux-armv7l-cpython-37/remixt/mappability/bwa/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/mappability/bwa 2022-06-01T03:18:19,813 copying build/lib.linux-armv7l-cpython-37/remixt/mappability/bwa/workflow.py -> build/bdist.linux-armv7l/wheel/remixt/mappability/bwa 2022-06-01T03:18:19,817 copying build/lib.linux-armv7l-cpython-37/remixt/mappability/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/mappability 2022-06-01T03:18:19,819 copying build/lib.linux-armv7l-cpython-37/remixt/mappability/tasks.py -> build/bdist.linux-armv7l/wheel/remixt/mappability 2022-06-01T03:18:19,823 copying build/lib.linux-armv7l-cpython-37/remixt/defaults.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:19,828 creating build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,829 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,832 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/breakpoints.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,836 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/segment.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,840 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/pipeline.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,844 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/temp.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,847 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/haplotype.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,852 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/readdepth.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,856 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/experiment.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,861 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/readcount.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,865 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/gcbias.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,869 copying build/lib.linux-armv7l-cpython-37/remixt/analysis/stats.py -> build/bdist.linux-armv7l/wheel/remixt/analysis 2022-06-01T03:18:19,873 copying build/lib.linux-armv7l-cpython-37/remixt/likelihood.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:19,880 copying build/lib.linux-armv7l-cpython-37/remixt/visualize.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:19,886 copying build/lib.linux-armv7l-cpython-37/remixt/bamreader.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,314 copying build/lib.linux-armv7l-cpython-37/remixt/workflow.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,319 creating build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,321 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/balanced.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,324 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,327 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/pipeline.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,332 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/seqread.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,339 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/workflow.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,342 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/simple.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,346 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/haplotype.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,349 copying build/lib.linux-armv7l-cpython-37/remixt/simulations/experiment.py -> build/bdist.linux-armv7l/wheel/remixt/simulations 2022-06-01T03:18:20,355 copying build/lib.linux-armv7l-cpython-37/remixt/cn_model.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,360 copying build/lib.linux-armv7l-cpython-37/remixt/segalg.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,364 copying build/lib.linux-armv7l-cpython-37/remixt/seqdataio.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,369 copying build/lib.linux-armv7l-cpython-37/remixt/utils.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,372 copying build/lib.linux-armv7l-cpython-37/remixt/bpmodel.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,479 copying build/lib.linux-armv7l-cpython-37/remixt/cn_plot.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,485 creating build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,487 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/cmdline.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,490 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,493 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/wraptheta.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,497 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/wrapremixt.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,501 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/utils.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,505 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/wraptitan.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,509 copying build/lib.linux-armv7l-cpython-37/remixt/wrappers/wrapclonehd.py -> build/bdist.linux-armv7l/wheel/remixt/wrappers 2022-06-01T03:18:20,514 creating build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,516 copying build/lib.linux-armv7l-cpython-37/remixt/ui/__init__.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,519 copying build/lib.linux-armv7l-cpython-37/remixt/ui/visualize_solutions.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,522 copying build/lib.linux-armv7l-cpython-37/remixt/ui/run.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,525 copying build/lib.linux-armv7l-cpython-37/remixt/ui/mappability_bwa.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,528 copying build/lib.linux-armv7l-cpython-37/remixt/ui/create_ref_data.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,531 copying build/lib.linux-armv7l-cpython-37/remixt/ui/main.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,535 copying build/lib.linux-armv7l-cpython-37/remixt/ui/plot_results.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,538 copying build/lib.linux-armv7l-cpython-37/remixt/ui/write_results.py -> build/bdist.linux-armv7l/wheel/remixt/ui 2022-06-01T03:18:20,541 copying build/lib.linux-armv7l-cpython-37/remixt/config.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,544 copying build/lib.linux-armv7l-cpython-37/remixt/_version.py -> build/bdist.linux-armv7l/wheel/remixt 2022-06-01T03:18:20,547 running install_egg_info 2022-06-01T03:18:21,844 running egg_info 2022-06-01T03:18:22,484 writing remixt.egg-info/PKG-INFO 2022-06-01T03:18:23,076 writing dependency_links to remixt.egg-info/dependency_links.txt 2022-06-01T03:18:24,848 writing entry points to remixt.egg-info/entry_points.txt 2022-06-01T03:18:26,030 writing requirements to remixt.egg-info/requires.txt 2022-06-01T03:18:26,623 writing top-level names to remixt.egg-info/top_level.txt 2022-06-01T03:18:26,668 /usr/local/lib/python3.7/dist-packages/setuptools/command/egg_info.py:637: SetuptoolsDeprecationWarning: Custom 'build_py' does not implement 'get_data_files_without_manifest'. 2022-06-01T03:18:26,668 Please extend command classes from setuptools instead of distutils. 2022-06-01T03:18:26,668 SetuptoolsDeprecationWarning 2022-06-01T03:18:26,740 reading manifest file 'remixt.egg-info/SOURCES.txt' 2022-06-01T03:18:26,802 reading manifest template 'MANIFEST.in' 2022-06-01T03:18:26,874 writing manifest file 'remixt.egg-info/SOURCES.txt' 2022-06-01T03:18:26,878 Copying remixt.egg-info to build/bdist.linux-armv7l/wheel/remixt-0.5.19-py3.7.egg-info 2022-06-01T03:18:26,902 running install_scripts 2022-06-01T03:18:27,055 creating build/bdist.linux-armv7l/wheel/remixt-0.5.19.dist-info/WHEEL 2022-06-01T03:18:27,059 creating '/tmp/pip-wheel-aza9qtpu/remixt-0.5.19-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-06-01T03:18:27,064 adding 'remixt/__init__.py' 2022-06-01T03:18:27,067 adding 'remixt/_version.py' 2022-06-01T03:18:30,989 adding 'remixt/bamreader.cpython-37m-arm-linux-gnueabihf.so' 2022-06-01T03:18:32,215 adding 'remixt/bpmodel.cpython-37m-arm-linux-gnueabihf.so' 2022-06-01T03:18:32,264 adding 'remixt/cn_model.py' 2022-06-01T03:18:32,271 adding 'remixt/cn_plot.py' 2022-06-01T03:18:32,274 adding 'remixt/config.py' 2022-06-01T03:18:32,277 adding 'remixt/defaults.py' 2022-06-01T03:18:32,286 adding 'remixt/likelihood.py' 2022-06-01T03:18:32,290 adding 'remixt/ref_data.py' 2022-06-01T03:18:32,294 adding 'remixt/segalg.py' 2022-06-01T03:18:32,298 adding 'remixt/seqdataio.py' 2022-06-01T03:18:32,301 adding 'remixt/utils.py' 2022-06-01T03:18:32,308 adding 'remixt/visualize.py' 2022-06-01T03:18:32,312 adding 'remixt/workflow.py' 2022-06-01T03:18:32,315 adding 'remixt/analysis/__init__.py' 2022-06-01T03:18:32,318 adding 'remixt/analysis/breakpoints.py' 2022-06-01T03:18:32,322 adding 'remixt/analysis/experiment.py' 2022-06-01T03:18:32,327 adding 'remixt/analysis/gcbias.py' 2022-06-01T03:18:32,336 adding 'remixt/analysis/haplotype.py' 2022-06-01T03:18:32,341 adding 'remixt/analysis/pipeline.py' 2022-06-01T03:18:32,343 adding 'remixt/analysis/readcount.py' 2022-06-01T03:18:32,346 adding 'remixt/analysis/readdepth.py' 2022-06-01T03:18:32,350 adding 'remixt/analysis/segment.py' 2022-06-01T03:18:32,352 adding 'remixt/analysis/stats.py' 2022-06-01T03:18:32,354 adding 'remixt/analysis/temp.py' 2022-06-01T03:18:32,357 adding 'remixt/mappability/__init__.py' 2022-06-01T03:18:32,360 adding 'remixt/mappability/tasks.py' 2022-06-01T03:18:32,363 adding 'remixt/mappability/bwa/__init__.py' 2022-06-01T03:18:32,365 adding 'remixt/mappability/bwa/workflow.py' 2022-06-01T03:18:32,368 adding 'remixt/simulations/__init__.py' 2022-06-01T03:18:32,371 adding 'remixt/simulations/balanced.py' 2022-06-01T03:18:32,383 adding 'remixt/simulations/experiment.py' 2022-06-01T03:18:32,386 adding 'remixt/simulations/haplotype.py' 2022-06-01T03:18:32,395 adding 'remixt/simulations/pipeline.py' 2022-06-01T03:18:32,400 adding 'remixt/simulations/seqread.py' 2022-06-01T03:18:32,403 adding 'remixt/simulations/simple.py' 2022-06-01T03:18:32,406 adding 'remixt/simulations/workflow.py' 2022-06-01T03:18:32,409 adding 'remixt/tests/__init__.py' 2022-06-01T03:18:32,411 adding 'remixt/tests/test_haplotype.py' 2022-06-01T03:18:32,415 adding 'remixt/tests/test_likelihood.py' 2022-06-01T03:18:32,419 adding 'remixt/tests/test_model.py' 2022-06-01T03:18:32,424 adding 'remixt/tests/test_remixt.py' 2022-06-01T03:18:32,427 adding 'remixt/tests/test_segalg.py' 2022-06-01T03:18:32,429 adding 'remixt/tests/test_seqdata.py' 2022-06-01T03:18:32,431 adding 'remixt/tests/utils.py' 2022-06-01T03:18:32,434 adding 'remixt/tests/unopt/__init__.py' 2022-06-01T03:18:32,437 adding 'remixt/tests/unopt/model.py' 2022-06-01T03:18:32,440 adding 'remixt/ui/__init__.py' 2022-06-01T03:18:32,442 adding 'remixt/ui/create_ref_data.py' 2022-06-01T03:18:32,444 adding 'remixt/ui/main.py' 2022-06-01T03:18:32,447 adding 'remixt/ui/mappability_bwa.py' 2022-06-01T03:18:32,449 adding 'remixt/ui/plot_results.py' 2022-06-01T03:18:32,451 adding 'remixt/ui/run.py' 2022-06-01T03:18:32,454 adding 'remixt/ui/visualize_solutions.py' 2022-06-01T03:18:32,457 adding 'remixt/ui/write_results.py' 2022-06-01T03:18:32,460 adding 'remixt/wrappers/__init__.py' 2022-06-01T03:18:32,462 adding 'remixt/wrappers/cmdline.py' 2022-06-01T03:18:32,465 adding 'remixt/wrappers/utils.py' 2022-06-01T03:18:32,470 adding 'remixt/wrappers/wrapclonehd.py' 2022-06-01T03:18:32,477 adding 'remixt/wrappers/wrapremixt.py' 2022-06-01T03:18:32,482 adding 'remixt/wrappers/wraptheta.py' 2022-06-01T03:18:32,486 adding 'remixt/wrappers/wraptitan.py' 2022-06-01T03:18:32,491 adding 'remixt-0.5.19.dist-info/METADATA' 2022-06-01T03:18:32,493 adding 'remixt-0.5.19.dist-info/WHEEL' 2022-06-01T03:18:32,498 adding 'remixt-0.5.19.dist-info/entry_points.txt' 2022-06-01T03:18:32,503 adding 'remixt-0.5.19.dist-info/top_level.txt' 2022-06-01T03:18:32,505 adding 'remixt-0.5.19.dist-info/RECORD' 2022-06-01T03:18:32,628 removing build/bdist.linux-armv7l/wheel 2022-06-01T03:18:33,006 Building wheel for remixt (setup.py): finished with status 'done' 2022-06-01T03:18:33,132 Created wheel for remixt: filename=remixt-0.5.19-cp37-cp37m-linux_armv7l.whl size=3982465 sha256=5632cefed45323a87d5c5bab24ffcc751a522dcc9e4bb71e78261be1cb8b4197 2022-06-01T03:18:33,135 Stored in directory: /tmp/pip-ephem-wheel-cache-8gi39ghx/wheels/1a/fb/cd/ad869d5743b2a6d0e1d74aef429c9f160bc65d5238610c3bdc 2022-06-01T03:18:33,165 Successfully built remixt 2022-06-01T03:18:33,467 Removed build tracker: '/tmp/pip-build-tracker-xiadgsrt'