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https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.10.0-py3-none-any.whl#sha256=1592cbe8b233aee799863812aa4aae96af70548fe84faccd8dbe31a0ee47b99b (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,158 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.9.2-py3-none-any.whl#sha256=138788f8d34302777b95038834e7e661dff837f4cf1ba9fd8bcf61d739207c1c (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,159 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.9.1-py3-none-any.whl#sha256=6c15be93ed14925455a9448c15c815b869d806bf0b78d92e3b3d1482e46f605b (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,159 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.9.0-py3-none-any.whl#sha256=387d54a34e72958a77e5384235659271ae03b5ac44f17ad90f9eca19104175e6 (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,160 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.1-py3-none-any.whl#sha256=56eb9fc24fcd37e2863781cfa680aff9a933cbe39cab2e012532fd7423843c58 (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,160 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.1rc1-py3-none-any.whl#sha256=122b81d37c2a8a3c39c5dd339cdd99e2d997af844460061fbfb37d24f8eb8e4d (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,161 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.0-py3-none-any.whl#sha256=dd67da3be221e40941dd60ab6f1411d8bcb98c05637a32aa51a9d8e5f4b59f89 (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,161 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.0rc4-py3-none-any.whl#sha256=837d4981dad2f2cb24179645cb8af06ac71607f8c9ea9653d2b2994c34bedb6e (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,162 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.0rc2-py3-none-any.whl#sha256=92cf87faf12f415e429b98c9a3aaf7d978ba12e0fa060eed3488232396a18af3 (from https://www.piwheels.org/simple/mdanalysistests/) 2022-06-02T19:36:21,163 Skipping link: not a file: https://www.piwheels.org/simple/mdanalysistests/ 2022-06-02T19:36:21,163 Skipping link: not a file: https://pypi.org/simple/mdanalysistests/ 2022-06-02T19:36:21,218 Given no hashes to check 1 links for project 'mdanalysistests': discarding no candidates 2022-06-02T19:36:21,259 Collecting mdanalysistests==2.2.0 2022-06-02T19:36:21,263 Created temporary directory: /tmp/pip-unpack-ud7dh_fb 2022-06-02T19:36:23,731 Downloading MDAnalysisTests-2.2.0.tar.gz (52.5 MB) 2022-06-02T19:36:47,161 Added mdanalysistests==2.2.0 from https://files.pythonhosted.org/packages/ad/07/568c711d717dc2315578bb5a1fed04fffc6c6632f5e81f94969c4c8ee2eb/MDAnalysisTests-2.2.0.tar.gz#sha256=28d17b8c4ac0be3fe424acc9ac250e7bbbad6496eba21d915c58eb389ce04eb2 to build tracker '/tmp/pip-build-tracker-vn_7448h' 2022-06-02T19:36:47,164 Running setup.py (path:/tmp/pip-wheel-h64gf_rc/mdanalysistests_5334a1b08a4443ad9aa3d0323ceb5f0d/setup.py) egg_info for package mdanalysistests 2022-06-02T19:36:47,166 Created temporary directory: /tmp/pip-pip-egg-info-efm4b7ji 2022-06-02T19:36:47,166 Preparing metadata (setup.py): started 2022-06-02T19:36:47,168 Running command python setup.py egg_info 2022-06-02T19:36:54,097 running egg_info 2022-06-02T19:36:54,101 creating /tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info 2022-06-02T19:36:54,705 writing /tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/PKG-INFO 2022-06-02T19:36:55,278 writing dependency_links to /tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/dependency_links.txt 2022-06-02T19:36:58,091 writing requirements to /tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/requires.txt 2022-06-02T19:36:58,652 writing top-level names to /tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/top_level.txt 2022-06-02T19:36:58,654 writing manifest file '/tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/SOURCES.txt' 2022-06-02T19:36:59,653 reading manifest file '/tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/SOURCES.txt' 2022-06-02T19:36:59,656 reading manifest template 'MANIFEST.in' 2022-06-02T19:36:59,660 warning: no files found matching 'TODO' 2022-06-02T19:36:59,661 warning: no files found matching 'SUMMARY.txt' 2022-06-02T19:36:59,737 warning: no previously-included files matching '*~' found anywhere in distribution 2022-06-02T19:36:59,741 warning: no previously-included files matching '*.pkl' found anywhere in distribution 2022-06-02T19:36:59,741 adding license file 'LICENSE' 2022-06-02T19:36:59,742 adding license file 'AUTHORS' 2022-06-02T19:36:59,791 writing manifest file '/tmp/pip-pip-egg-info-efm4b7ji/MDAnalysisTests.egg-info/SOURCES.txt' 2022-06-02T19:37:00,005 Preparing metadata (setup.py): finished with status 'done' 2022-06-02T19:37:00,016 Source in /tmp/pip-wheel-h64gf_rc/mdanalysistests_5334a1b08a4443ad9aa3d0323ceb5f0d has version 2.2.0, which satisfies requirement mdanalysistests==2.2.0 from https://files.pythonhosted.org/packages/ad/07/568c711d717dc2315578bb5a1fed04fffc6c6632f5e81f94969c4c8ee2eb/MDAnalysisTests-2.2.0.tar.gz#sha256=28d17b8c4ac0be3fe424acc9ac250e7bbbad6496eba21d915c58eb389ce04eb2 2022-06-02T19:37:00,018 Removed mdanalysistests==2.2.0 from https://files.pythonhosted.org/packages/ad/07/568c711d717dc2315578bb5a1fed04fffc6c6632f5e81f94969c4c8ee2eb/MDAnalysisTests-2.2.0.tar.gz#sha256=28d17b8c4ac0be3fe424acc9ac250e7bbbad6496eba21d915c58eb389ce04eb2 from build tracker '/tmp/pip-build-tracker-vn_7448h' 2022-06-02T19:37:00,032 Created temporary directory: /tmp/pip-unpack-4au8z1c6 2022-06-02T19:37:00,033 Building wheels for collected packages: mdanalysistests 2022-06-02T19:37:00,043 Created temporary directory: /tmp/pip-wheel-7lvn13dg 2022-06-02T19:37:00,044 Building wheel for mdanalysistests (setup.py): started 2022-06-02T19:37:00,046 Destination directory: /tmp/pip-wheel-7lvn13dg 2022-06-02T19:37:00,046 Running command python setup.py bdist_wheel 2022-06-02T19:37:06,334 running bdist_wheel 2022-06-02T19:37:06,426 The [wheel] section is deprecated. Use [bdist_wheel] instead. 2022-06-02T19:37:07,534 running build 2022-06-02T19:37:07,535 running build_py 2022-06-02T19:37:08,148 creating build 2022-06-02T19:37:08,148 creating build/lib 2022-06-02T19:37:08,150 creating build/lib/MDAnalysisTests 2022-06-02T19:37:08,152 copying MDAnalysisTests/util.py -> build/lib/MDAnalysisTests 2022-06-02T19:37:08,157 copying MDAnalysisTests/test_api.py -> build/lib/MDAnalysisTests 2022-06-02T19:37:08,160 copying MDAnalysisTests/dummy.py -> build/lib/MDAnalysisTests 2022-06-02T19:37:08,164 copying MDAnalysisTests/__init__.py -> build/lib/MDAnalysisTests 2022-06-02T19:37:08,168 copying MDAnalysisTests/datafiles.py -> build/lib/MDAnalysisTests 2022-06-02T19:37:08,178 creating build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,179 copying MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,184 copying MDAnalysisTests/analysis/test_diffusionmap.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,188 copying MDAnalysisTests/analysis/test_density.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,193 copying MDAnalysisTests/analysis/test_pca.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,197 copying MDAnalysisTests/analysis/test_leaflet.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,201 copying MDAnalysisTests/analysis/test_base.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,205 copying MDAnalysisTests/analysis/test_dihedrals.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,210 copying MDAnalysisTests/analysis/test_psa.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,214 copying MDAnalysisTests/analysis/test_encore.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,220 copying MDAnalysisTests/analysis/test_data.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,223 copying MDAnalysisTests/analysis/test_nucleicacids.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,227 copying MDAnalysisTests/analysis/test_distances.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,231 copying MDAnalysisTests/analysis/test_hole2.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,236 copying MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,240 copying MDAnalysisTests/analysis/test_rdf_s.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,244 copying MDAnalysisTests/analysis/test_align.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,250 copying MDAnalysisTests/analysis/test_lineardensity.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,254 copying MDAnalysisTests/analysis/test_bat.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,258 copying MDAnalysisTests/analysis/test_msd.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,262 copying MDAnalysisTests/analysis/test_gnm.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,266 copying MDAnalysisTests/analysis/test_contacts.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,271 copying MDAnalysisTests/analysis/test_rdf.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,274 copying MDAnalysisTests/analysis/test_waterdynamics.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,279 copying MDAnalysisTests/analysis/test_dielectric.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,282 copying MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,287 copying MDAnalysisTests/analysis/test_nuclinfo.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,291 copying MDAnalysisTests/analysis/test_rms.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,296 copying MDAnalysisTests/analysis/test_helix_analysis.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,300 copying MDAnalysisTests/analysis/__init__.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,303 copying MDAnalysisTests/analysis/test_wbridge.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,309 copying MDAnalysisTests/analysis/test_persistencelength.py -> build/lib/MDAnalysisTests/analysis 2022-06-02T19:37:08,315 creating build/lib/MDAnalysisTests/visualization 2022-06-02T19:37:08,317 copying MDAnalysisTests/visualization/test_streamlines.py -> build/lib/MDAnalysisTests/visualization 2022-06-02T19:37:08,321 copying MDAnalysisTests/visualization/__init__.py -> build/lib/MDAnalysisTests/visualization 2022-06-02T19:37:08,328 creating build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,329 copying MDAnalysisTests/core/test_group_traj_access.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,333 copying MDAnalysisTests/core/test_accessors.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,337 copying MDAnalysisTests/core/util.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,342 copying MDAnalysisTests/core/test_unwrap.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,346 copying MDAnalysisTests/core/test_wrap.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,351 copying MDAnalysisTests/core/test_residuegroup.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,355 copying MDAnalysisTests/core/test_updating_atomgroup.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,359 copying MDAnalysisTests/core/test_universe.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,365 copying MDAnalysisTests/core/test_fragments.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,369 copying MDAnalysisTests/core/test_groups.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,376 copying MDAnalysisTests/core/test_topology.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,381 copying MDAnalysisTests/core/test_atomselections.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,387 copying MDAnalysisTests/core/test_copying.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,391 copying MDAnalysisTests/core/test_topologyattrs.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,396 copying MDAnalysisTests/core/test_segmentgroup.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,399 copying MDAnalysisTests/core/test_atomgroup.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,407 copying MDAnalysisTests/core/test_segment.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,410 copying MDAnalysisTests/core/test_index_dtype.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,413 copying MDAnalysisTests/core/test_residue.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,416 copying MDAnalysisTests/core/__init__.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,419 copying MDAnalysisTests/core/test_accumulate.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,422 copying MDAnalysisTests/core/test_atom.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,426 copying MDAnalysisTests/core/test_requires.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,429 copying MDAnalysisTests/core/test_topologyobjects.py -> build/lib/MDAnalysisTests/core 2022-06-02T19:37:08,436 creating build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,438 copying MDAnalysisTests/transformations/test_wrap.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,442 copying MDAnalysisTests/transformations/test_base.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,446 copying MDAnalysisTests/transformations/test_fit.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,450 copying MDAnalysisTests/transformations/test_positionaveraging.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,454 copying MDAnalysisTests/transformations/test_rotate.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,458 copying MDAnalysisTests/transformations/__init__.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,461 copying MDAnalysisTests/transformations/test_translate.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,465 copying MDAnalysisTests/transformations/test_boxdimensions.py -> build/lib/MDAnalysisTests/transformations 2022-06-02T19:37:08,470 creating build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,472 copying MDAnalysisTests/lib/test_neighborsearch.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,476 copying MDAnalysisTests/lib/test_cutil.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,479 copying MDAnalysisTests/lib/test_nsgrid.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,484 copying MDAnalysisTests/lib/test_distances.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,491 copying MDAnalysisTests/lib/test_pkdtree.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,495 copying MDAnalysisTests/lib/test_log.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,498 copying MDAnalysisTests/lib/test_util.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,507 copying MDAnalysisTests/lib/__init__.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,510 copying MDAnalysisTests/lib/test_augment.py -> build/lib/MDAnalysisTests/lib 2022-06-02T19:37:08,515 creating build/lib/MDAnalysisTests/import 2022-06-02T19:37:08,516 copying MDAnalysisTests/import/fork_called.py -> build/lib/MDAnalysisTests/import 2022-06-02T19:37:08,520 copying MDAnalysisTests/import/__init__.py -> build/lib/MDAnalysisTests/import 2022-06-02T19:37:08,523 copying MDAnalysisTests/import/test_import.py -> build/lib/MDAnalysisTests/import 2022-06-02T19:37:08,530 creating build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,532 copying MDAnalysisTests/topology/test_mmtf.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,536 copying MDAnalysisTests/topology/test_txyz.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,539 copying MDAnalysisTests/topology/test_xyz.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,543 copying MDAnalysisTests/topology/test_minimal.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,546 copying MDAnalysisTests/topology/test_topology_base.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,549 copying MDAnalysisTests/topology/test_gsd.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,552 copying MDAnalysisTests/topology/test_crd.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,556 copying MDAnalysisTests/topology/test_dms.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,559 copying MDAnalysisTests/topology/test_pqr.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,563 copying MDAnalysisTests/topology/test_gms.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,566 copying MDAnalysisTests/topology/test_top.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,571 copying MDAnalysisTests/topology/test_itp.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,576 copying MDAnalysisTests/topology/test_dlpoly.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,579 copying MDAnalysisTests/topology/test_mol2.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,583 copying MDAnalysisTests/topology/test_hoomdxml.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,587 copying MDAnalysisTests/topology/test_tprparser.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,591 copying MDAnalysisTests/topology/test_guessers.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,595 copying MDAnalysisTests/topology/test_lammpsdata.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,599 copying MDAnalysisTests/topology/test_pdbqt.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,602 copying MDAnalysisTests/topology/test_xpdb.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,606 copying MDAnalysisTests/topology/test_psf.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,609 copying MDAnalysisTests/topology/test_topology_str_types.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,613 copying MDAnalysisTests/topology/test_gro.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,616 copying MDAnalysisTests/topology/__init__.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,619 copying MDAnalysisTests/topology/test_altloc.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,622 copying MDAnalysisTests/topology/test_pdb.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,626 copying MDAnalysisTests/topology/test_fhiaims.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,629 copying MDAnalysisTests/topology/base.py -> build/lib/MDAnalysisTests/topology 2022-06-02T19:37:08,635 creating build/lib/MDAnalysisTests/formats 2022-06-02T19:37:08,636 copying MDAnalysisTests/formats/test_libdcd.py -> build/lib/MDAnalysisTests/formats 2022-06-02T19:37:08,641 copying MDAnalysisTests/formats/test_libmdaxdr.py -> build/lib/MDAnalysisTests/formats 2022-06-02T19:37:08,646 copying MDAnalysisTests/formats/__init__.py -> build/lib/MDAnalysisTests/formats 2022-06-02T19:37:08,653 creating build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,654 copying MDAnalysisTests/coordinates/test_mmtf.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,658 copying MDAnalysisTests/coordinates/test_txyz.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,661 copying MDAnalysisTests/coordinates/test_namdbin.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,664 copying MDAnalysisTests/coordinates/reference.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,668 copying MDAnalysisTests/coordinates/test_xyz.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,671 copying MDAnalysisTests/coordinates/test_memory.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,676 copying MDAnalysisTests/coordinates/test_writer_registration.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,679 copying MDAnalysisTests/coordinates/test_trj.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,682 copying MDAnalysisTests/coordinates/test_trz.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,686 copying MDAnalysisTests/coordinates/test_xdr.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,692 copying MDAnalysisTests/coordinates/test_gsd.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,695 copying MDAnalysisTests/coordinates/test_writer_api.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,699 copying MDAnalysisTests/coordinates/test_windows.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,702 copying MDAnalysisTests/coordinates/test_crd.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,706 copying MDAnalysisTests/coordinates/test_dms.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,709 copying MDAnalysisTests/coordinates/test_pqr.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,713 copying MDAnalysisTests/coordinates/test_gms.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,716 copying MDAnalysisTests/coordinates/test_dcd.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,720 copying MDAnalysisTests/coordinates/test_copying.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,724 copying MDAnalysisTests/coordinates/test_chainreader.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,729 copying MDAnalysisTests/coordinates/test_timestep_api.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,733 copying MDAnalysisTests/coordinates/test_dlpoly.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,737 copying MDAnalysisTests/coordinates/test_mol2.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,741 copying MDAnalysisTests/coordinates/test_netcdf.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,747 copying MDAnalysisTests/coordinates/test_chemfiles.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,751 copying MDAnalysisTests/coordinates/test_h5md.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,756 copying MDAnalysisTests/coordinates/test_pdbqt.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,760 copying MDAnalysisTests/coordinates/test_null.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,763 copying MDAnalysisTests/coordinates/test_gro.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,767 copying MDAnalysisTests/coordinates/__init__.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,770 copying MDAnalysisTests/coordinates/test_pdb.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,776 copying MDAnalysisTests/coordinates/test_fhiaims.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,780 copying MDAnalysisTests/coordinates/test_amber_inpcrd.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,783 copying MDAnalysisTests/coordinates/base.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,789 copying MDAnalysisTests/coordinates/test_reader_api.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,793 copying MDAnalysisTests/coordinates/test_lammps.py -> build/lib/MDAnalysisTests/coordinates 2022-06-02T19:37:08,799 creating build/lib/MDAnalysisTests/auxiliary 2022-06-02T19:37:08,800 copying MDAnalysisTests/auxiliary/test_core.py -> build/lib/MDAnalysisTests/auxiliary 2022-06-02T19:37:08,803 copying MDAnalysisTests/auxiliary/test_xvg.py -> build/lib/MDAnalysisTests/auxiliary 2022-06-02T19:37:08,807 copying MDAnalysisTests/auxiliary/__init__.py -> build/lib/MDAnalysisTests/auxiliary 2022-06-02T19:37:08,810 copying MDAnalysisTests/auxiliary/base.py -> build/lib/MDAnalysisTests/auxiliary 2022-06-02T19:37:08,818 creating build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,819 copying MDAnalysisTests/utils/test_pickleio.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,824 copying MDAnalysisTests/utils/test_imports.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,827 copying MDAnalysisTests/utils/test_datafiles.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,830 copying MDAnalysisTests/utils/test_selections.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,834 copying MDAnalysisTests/utils/test_streamio.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,839 copying MDAnalysisTests/utils/test_transformations.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,845 copying MDAnalysisTests/utils/test_units.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,849 copying MDAnalysisTests/utils/test_qcprot.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,853 copying MDAnalysisTests/utils/test_log.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,856 copying MDAnalysisTests/utils/test_persistence.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,860 copying MDAnalysisTests/utils/test_meta.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,864 copying MDAnalysisTests/utils/__init__.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,867 copying MDAnalysisTests/utils/test_duecredit.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,871 copying MDAnalysisTests/utils/test_modelling.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,875 copying MDAnalysisTests/utils/test_failure.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:08,878 copying MDAnalysisTests/utils/test_authors.py -> build/lib/MDAnalysisTests/utils 2022-06-02T19:37:09,146 creating build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,148 copying MDAnalysisTests/data/2r9r-1b.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,167 copying MDAnalysisTests/data/SiN_tric_namd.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,208 copying MDAnalysisTests/data/namd_cgenff.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,214 copying MDAnalysisTests/data/nosegid.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,219 copying MDAnalysisTests/data/adk_closed_NAMD.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,267 copying MDAnalysisTests/data/tip125_tric_C36.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,276 copying MDAnalysisTests/data/trz_psf.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,308 copying MDAnalysisTests/data/adk.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,359 copying MDAnalysisTests/data/watdyn.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,362 copying MDAnalysisTests/data/adk_notop.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,385 copying MDAnalysisTests/data/parmed_ala3.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,390 copying MDAnalysisTests/data/adk_notop_BAD.psf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,410 copying MDAnalysisTests/data/empty.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,413 copying MDAnalysisTests/data/SiN_tric_namd.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,424 copying MDAnalysisTests/data/adk_gbis_tmd-fast1_NAMD.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,600 copying MDAnalysisTests/data/adk_dims.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,772 copying MDAnalysisTests/data/watdyn.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:09,776 copying MDAnalysisTests/data/adk_dims2.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,004 copying MDAnalysisTests/data/tip125_tric_C36.dcd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,011 copying MDAnalysisTests/data/nucl_res.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,015 copying MDAnalysisTests/data/5a7u.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,023 copying MDAnalysisTests/data/adk_open.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,041 copying MDAnalysisTests/data/pdbqt_querypdb.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,046 copying MDAnalysisTests/data/RANDOM_WALK_TOPO.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,050 copying MDAnalysisTests/data/SINGLECONECT.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,054 copying MDAnalysisTests/data/namd_cgenff.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,059 copying MDAnalysisTests/data/unordered_res.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,066 copying MDAnalysisTests/data/A6PA6_alpha.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,071 copying MDAnalysisTests/data/4E43.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,085 copying MDAnalysisTests/data/5digitResid.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,089 copying MDAnalysisTests/data/adk_oplsaa.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,253 copying MDAnalysisTests/data/align.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,257 copying MDAnalysisTests/data/cobrotoxin.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,340 copying MDAnalysisTests/data/adk_closed.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,358 copying MDAnalysisTests/data/1hvr.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,372 copying MDAnalysisTests/data/xl_serial.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,376 copying MDAnalysisTests/data/1grm_single.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,381 copying MDAnalysisTests/data/model_then_cryst.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,385 copying MDAnalysisTests/data/cobrotoxin_dry_neutral_0.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,393 copying MDAnalysisTests/data/CONECT2TER.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,396 copying MDAnalysisTests/data/elements.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,400 copying MDAnalysisTests/data/conect_parsing.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,404 copying MDAnalysisTests/data/nmr_neopetrosiamide.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,447 copying MDAnalysisTests/data/cryst_then_model.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,451 copying MDAnalysisTests/data/sameresid_diffresname.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,455 copying MDAnalysisTests/data/incomplete.pdb -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:10,458 creating build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,460 copying MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,566 copying MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,664 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,697 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,728 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,763 copying MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,868 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,900 copying MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,932 copying MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:10,968 copying MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,092 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,126 copying MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,162 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,202 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,232 copying MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,269 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,305 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,342 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,373 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,409 copying MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,440 copying MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,474 copying MDAnalysisTests/data/tprs/drew_gmx_4.5.5.double.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,553 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,582 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,616 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,653 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,689 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,721 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,757 copying MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr -> build/lib/MDAnalysisTests/data/tprs 2022-06-02T19:37:11,788 creating build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,789 copying MDAnalysisTests/data/tprs/all_bonded/dummy.gro -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,793 copying MDAnalysisTests/data/tprs/all_bonded/dummy.top -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,797 copying MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.top -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,801 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2018.mdp -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,805 copying MDAnalysisTests/data/tprs/all_bonded/dummy.mdp -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,808 copying MDAnalysisTests/data/cobrotoxin.tpr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:11,845 copying MDAnalysisTests/data/adk_oplsaa.tpr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:11,958 creating build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,960 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,965 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,970 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,976 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,982 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,987 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:11,993 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:11,998 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,004 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,009 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,014 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,018 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,023 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,027 copying MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,035 copying MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,039 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,044 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:12,048 copying MDAnalysisTests/data/sample_velocity_file.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,051 copying MDAnalysisTests/data/residwrap.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,056 copying MDAnalysisTests/data/missing_atomname.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,059 copying MDAnalysisTests/data/plength.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,106 copying MDAnalysisTests/data/empty_atom.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,110 copying MDAnalysisTests/data/dppc_vesicle_hg.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,119 copying MDAnalysisTests/data/huge_box.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,123 copying MDAnalysisTests/data/two_water_gro.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,128 copying MDAnalysisTests/data/two_water_gro_widebox.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,132 copying MDAnalysisTests/data/make_whole.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,136 copying MDAnalysisTests/data/adk_oplsaa.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,246 copying MDAnalysisTests/data/grovels.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,250 copying MDAnalysisTests/data/martini_dppc_chol_bilayer.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,273 copying MDAnalysisTests/data/sameresid_diffresname.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,277 copying MDAnalysisTests/data/two_water_gro_nonames.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,281 copying MDAnalysisTests/data/two_water_gro_multiframe.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,285 copying MDAnalysisTests/data/residwrap_0base.gro -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,289 copying MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,293 copying MDAnalysisTests/data/xyz_random_walk.xtc -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,303 copying MDAnalysisTests/data/adk_oplsaa.xtc -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,390 copying MDAnalysisTests/data/cobrotoxin.xtc -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,406 copying MDAnalysisTests/data/adk_oplsaa.trr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,875 copying MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,879 copying MDAnalysisTests/data/cobrotoxin.trr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,987 copying MDAnalysisTests/data/surface.trr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,991 copying MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:12,998 copying MDAnalysisTests/data/adk_oplsaa_dihedral_list.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,002 copying MDAnalysisTests/data/adk_oplsaa_dihedral.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,006 copying MDAnalysisTests/data/legacy_DCD_c36_coords.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,010 copying MDAnalysisTests/data/adk_oplsaa_rama.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,017 copying MDAnalysisTests/data/adk_oplsaa_janin.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,023 copying MDAnalysisTests/data/legacy_DCD_adk_coords.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,032 copying MDAnalysisTests/data/adk_oplsaa_CA_rmsf.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,036 copying MDAnalysisTests/data/mol2_comments_header_bat.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,039 copying MDAnalysisTests/data/adk_oplsaa_LYS_janin.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,043 copying MDAnalysisTests/data/adk_oplsaa_GLY_rama.npy -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,048 copying MDAnalysisTests/data/adk_open.crd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,065 copying MDAnalysisTests/data/2r9r-1b.xyz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,085 copying MDAnalysisTests/data/five.xyz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,088 copying MDAnalysisTests/data/mini.xyz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,092 creating build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,093 copying MDAnalysisTests/data/Amber/anti_md1.mdcrd.bz2 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,168 copying MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,175 copying MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,179 copying MDAnalysisTests/data/Amber/ache.mdcrd.bz2 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,185 copying MDAnalysisTests/data/Amber/capped-ala.mdcrd.bz2 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,213 copying MDAnalysisTests/data/Amber/parmed_fad.prmtop -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,226 copying MDAnalysisTests/data/Amber/bala.prmtop -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,252 copying MDAnalysisTests/data/Amber/chitosan.prmtop -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,263 copying MDAnalysisTests/data/Amber/capped-ala.prmtop -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,317 copying MDAnalysisTests/data/Amber/ache.prmtop -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,326 copying MDAnalysisTests/data/Amber/anti.top -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,407 copying MDAnalysisTests/data/Amber/posfor.top -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,423 copying MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,427 copying MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,431 copying MDAnalysisTests/data/Amber/parmed_ala2_solv.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,463 copying MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,467 copying MDAnalysisTests/data/Amber/ace_tip3p.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,483 copying MDAnalysisTests/data/Amber/ace_mbondi3.error3.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,487 copying MDAnalysisTests/data/Amber/ace_mbondi3.parm7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,492 copying MDAnalysisTests/data/Amber/parmed_ala2_solv.rst7 -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,502 copying MDAnalysisTests/data/Amber/bala.trj -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,603 copying MDAnalysisTests/data/Amber/ache.mdcrd -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,611 copying MDAnalysisTests/data/Amber/posfor.ncdf -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,617 copying MDAnalysisTests/data/Amber/bala.ncdf -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,671 copying MDAnalysisTests/data/Amber/ace_tip3p.nc -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,701 copying MDAnalysisTests/data/Amber/ace_mbondi3.nc -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,704 copying MDAnalysisTests/data/Amber/tz2.truncoct.nc -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,744 copying MDAnalysisTests/data/Amber/test.inpcrd -> build/lib/MDAnalysisTests/data/Amber 2022-06-02T19:37:13,748 copying MDAnalysisTests/data/adk_open.pqr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,765 copying MDAnalysisTests/data/1A2C.pqr -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,789 copying MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,802 copying MDAnalysisTests/data/surface.pdb.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,806 copying MDAnalysisTests/data/bigbox.gro.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,867 copying MDAnalysisTests/data/2r9r-1b.xyz.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,876 copying MDAnalysisTests/data/cryst_then_model.pdb.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,880 copying MDAnalysisTests/data/1grm_elNemo_mode7.pdb.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,885 copying MDAnalysisTests/data/cobrotoxin_protein_forces.xvg.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,891 copying MDAnalysisTests/data/6msm.pdb.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,907 copying MDAnalysisTests/data/C12x64.xml.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,911 copying MDAnalysisTests/data/model_then_cryst.pdb.bz2 -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,916 copying MDAnalysisTests/data/model_then_cryst.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,920 copying MDAnalysisTests/data/1a28.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,929 copying MDAnalysisTests/data/chainIDnewres.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,933 copying MDAnalysisTests/data/cryst_then_model.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,939 copying MDAnalysisTests/data/5KIH.mmtf.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,944 copying MDAnalysisTests/data/19hc.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,960 copying MDAnalysisTests/data/fullerene.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,964 copying MDAnalysisTests/data/chainIDrepeat.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,968 copying MDAnalysisTests/data/1osm.pdb.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,975 copying MDAnalysisTests/data/6QYR.mmtf.gz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,980 copying MDAnalysisTests/data/testENT.ent -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,985 copying MDAnalysisTests/data/test.fasta -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,989 copying MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8.dat -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:13,994 copying MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8_frames10to79.dat -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,000 copying MDAnalysisTests/data/adk_closed_no_segid.dms -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,022 copying MDAnalysisTests/data/adk_closed.dms -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,045 copying MDAnalysisTests/data/adk_closed_domains.dms -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,068 creating build/lib/MDAnalysisTests/data/merge 2022-06-02T19:37:14,070 creating build/lib/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:14,072 copying MDAnalysisTests/data/merge/2zmm/protein.pdb -> build/lib/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:14,087 copying MDAnalysisTests/data/merge/2zmm/ligand.pdb -> build/lib/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:14,090 copying MDAnalysisTests/data/merge/2zmm/water.pdb -> build/lib/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:14,096 copying MDAnalysisTests/data/trzfile.trz -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,159 creating build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,160 copying MDAnalysisTests/data/mol2/sodium_ion.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,164 copying MDAnalysisTests/data/mol2/zinc_856218.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,169 copying MDAnalysisTests/data/mol2/Molecule_comments_header.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,172 copying MDAnalysisTests/data/mol2/Molecules.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,222 copying MDAnalysisTests/data/mol2/Ligand.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,230 copying MDAnalysisTests/data/mol2/BrokenMolecule.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,235 copying MDAnalysisTests/data/mol2/Molecule.mol2 -> build/lib/MDAnalysisTests/data/mol2 2022-06-02T19:37:14,240 creating build/lib/MDAnalysisTests/data/contacts 2022-06-02T19:37:14,242 copying MDAnalysisTests/data/contacts/villin_unfolded.gro.bz2 -> build/lib/MDAnalysisTests/data/contacts 2022-06-02T19:37:14,253 copying MDAnalysisTests/data/contacts/villin_folded.gro.bz2 -> build/lib/MDAnalysisTests/data/contacts 2022-06-02T19:37:14,264 copying MDAnalysisTests/data/contacts/2F4K_qlist5_remap.dat -> build/lib/MDAnalysisTests/data/contacts 2022-06-02T19:37:14,269 creating build/lib/MDAnalysisTests/data/capping 2022-06-02T19:37:14,271 copying MDAnalysisTests/data/capping/aaqaa.gro -> build/lib/MDAnalysisTests/data/capping 2022-06-02T19:37:14,277 copying MDAnalysisTests/data/capping/maestro_aaqaa_capped.pdb -> build/lib/MDAnalysisTests/data/capping 2022-06-02T19:37:14,282 copying MDAnalysisTests/data/capping/ace.pdb -> build/lib/MDAnalysisTests/data/capping 2022-06-02T19:37:14,286 copying MDAnalysisTests/data/capping/nma.pdb -> build/lib/MDAnalysisTests/data/capping 2022-06-02T19:37:14,290 creating build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,291 copying MDAnalysisTests/data/lammps/albite_triclinic.data -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,295 copying MDAnalysisTests/data/lammps/hydrogen-class1.data -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,299 copying MDAnalysisTests/data/lammps/spce_all_coords.lammpstrj.bz2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,398 copying MDAnalysisTests/data/lammps/mini.data -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,401 copying MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,424 copying MDAnalysisTests/data/lammps/ifabp_apo_100mM.in -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,428 copying MDAnalysisTests/data/lammps/ifabp_apo_100mM.data.bz2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,453 copying MDAnalysisTests/data/lammps/wat.lammpstrj.bz2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,457 copying MDAnalysisTests/data/lammps/datatest.data -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,635 copying MDAnalysisTests/data/lammps/hydrogen-class1.data2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,639 copying MDAnalysisTests/data/lammps/albite_triclinic.dump -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,643 copying MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,687 copying MDAnalysisTests/data/lammps/datatest.trz -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,725 copying MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,742 copying MDAnalysisTests/data/lammps/wat.lammpstrj_long.bz2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,746 copying MDAnalysisTests/data/lammps/spce_no_coords.lammpstrj.bz2 -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,751 copying MDAnalysisTests/data/lammps/deletedatoms.data -> build/lib/MDAnalysisTests/data/lammps 2022-06-02T19:37:14,754 creating build/lib/MDAnalysisTests/data/gms 2022-06-02T19:37:14,756 copying MDAnalysisTests/data/gms/surf2wat.gms -> build/lib/MDAnalysisTests/data/gms 2022-06-02T19:37:14,762 copying MDAnalysisTests/data/gms/symopt.gms -> build/lib/MDAnalysisTests/data/gms 2022-06-02T19:37:14,771 copying MDAnalysisTests/data/gms/c1opt.gms.gz -> build/lib/MDAnalysisTests/data/gms 2022-06-02T19:37:14,776 creating build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,778 copying MDAnalysisTests/data/dlpoly/CONFIG_order -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,782 copying MDAnalysisTests/data/dlpoly/CONFIG -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,788 copying MDAnalysisTests/data/dlpoly/CONFIG_minimal -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,792 copying MDAnalysisTests/data/dlpoly/HISTORY -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,807 copying MDAnalysisTests/data/dlpoly/HISTORY_minimal -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,811 copying MDAnalysisTests/data/dlpoly/HISTORY_order -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,815 copying MDAnalysisTests/data/dlpoly/HISTORY_classic -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,821 copying MDAnalysisTests/data/dlpoly/HISTORY_minimal_cell -> build/lib/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:14,825 creating build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,827 copying MDAnalysisTests/data/coordinates/test.h5md -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,838 copying MDAnalysisTests/data/coordinates/create_h5md_data.py -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,842 copying MDAnalysisTests/data/coordinates/test_incomplete_vel.gro -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,846 copying MDAnalysisTests/data/coordinates/test.xyz.bz2 -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,849 copying MDAnalysisTests/data/coordinates/test.trr -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,853 copying MDAnalysisTests/data/coordinates/new_hexane.arc -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,857 copying MDAnalysisTests/data/coordinates/test.txyz -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,861 copying MDAnalysisTests/data/coordinates/test.xyz -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,865 copying MDAnalysisTests/data/coordinates/test.gro.bz2 -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,868 copying MDAnalysisTests/data/coordinates/test.xtc -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,872 copying MDAnalysisTests/data/coordinates/test.dcd -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,876 copying MDAnalysisTests/data/coordinates/create_data.py -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,879 copying MDAnalysisTests/data/coordinates/test_topology.pdb -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,883 copying MDAnalysisTests/data/coordinates/test.gro -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,887 copying MDAnalysisTests/data/coordinates/README.md -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,890 copying MDAnalysisTests/data/coordinates/test.arc -> build/lib/MDAnalysisTests/data/coordinates 2022-06-02T19:37:14,894 copying MDAnalysisTests/data/test.xvg -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,898 copying MDAnalysisTests/data/test_highf.xvg -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,901 copying MDAnalysisTests/data/bad_num_col.xvg -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,905 copying MDAnalysisTests/data/test_lowf.xvg -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,909 copying MDAnalysisTests/data/1ubq-less-optional.mmtf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,913 copying MDAnalysisTests/data/3NJW-onlyrequired.mmtf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,917 copying MDAnalysisTests/data/173D.mmtf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:14,922 creating build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:14,923 copying MDAnalysisTests/data/analysis/align_unbound.pdb.gz -> build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:14,927 copying MDAnalysisTests/data/analysis/YiiP_lipids.gro.gz -> build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:14,991 copying MDAnalysisTests/data/analysis/YiiP_lipids.xtc -> build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:15,041 copying MDAnalysisTests/data/analysis/1k5i_c36.psf.gz -> build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:15,059 copying MDAnalysisTests/data/analysis/1k5i_c36.pdb.gz -> build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:15,076 copying MDAnalysisTests/data/analysis/align_bound.pdb.gz -> build/lib/MDAnalysisTests/data/analysis 2022-06-02T19:37:15,080 copying MDAnalysisTests/data/example.gsd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,102 copying MDAnalysisTests/data/example_longer.gsd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,198 copying MDAnalysisTests/data/example_bonds.gsd -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,206 creating build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,208 copying MDAnalysisTests/data/windows/WIN_HISTORY -> build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,222 copying MDAnalysisTests/data/windows/WIN_wat.lammpstrj -> build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,226 copying MDAnalysisTests/data/windows/WIN_nmr_neopetrosiamide.pdb -> build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,277 copying MDAnalysisTests/data/windows/WIN_ache.mdcrd -> build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,285 copying MDAnalysisTests/data/windows/README.md -> build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,289 copying MDAnalysisTests/data/windows/WIN_test.arc -> build/lib/MDAnalysisTests/data/windows 2022-06-02T19:37:15,292 copying MDAnalysisTests/data/spce.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,296 copying MDAnalysisTests/data/no_endif_spc.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,300 copying MDAnalysisTests/data/tip5p.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,303 copying MDAnalysisTests/data/gromacs_ala10.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,308 copying MDAnalysisTests/data/edited_itp.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,314 copying MDAnalysisTests/data/atomtypes.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,317 copying MDAnalysisTests/data/atomtypes_charge.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,321 copying MDAnalysisTests/data/itp_nomass.itp -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,328 creating build/lib/MDAnalysisTests/data/gromacs 2022-06-02T19:37:15,328 creating build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,330 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffbonded.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,336 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/forcefield.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,339 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ff_dum.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,343 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffnonbonded.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,359 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ions.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,362 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/test.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,366 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/spc.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:15,370 copying MDAnalysisTests/data/adk_open.coor -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,378 copying MDAnalysisTests/data/cobrotoxin.h5md -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,481 copying MDAnalysisTests/data/fhiaims.in -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,485 copying MDAnalysisTests/data/gromacs_ala10.top -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,489 copying MDAnalysisTests/data/bad_top.top -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:15,492 copying MDAnalysisTests/data/molecule.sdf -> build/lib/MDAnalysisTests/data 2022-06-02T19:37:16,145 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-06-02T19:37:16,146 warnings.warn( 2022-06-02T19:37:16,813 installing to build/bdist.linux-armv7l/wheel 2022-06-02T19:37:16,813 running install 2022-06-02T19:37:16,874 running install_lib 2022-06-02T19:37:17,489 creating build/bdist.linux-armv7l 2022-06-02T19:37:17,489 creating build/bdist.linux-armv7l/wheel 2022-06-02T19:37:17,492 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests 2022-06-02T19:37:17,496 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,498 copying build/lib/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,502 copying build/lib/MDAnalysisTests/analysis/test_diffusionmap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,506 copying build/lib/MDAnalysisTests/analysis/test_density.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,511 copying build/lib/MDAnalysisTests/analysis/test_pca.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,515 copying build/lib/MDAnalysisTests/analysis/test_leaflet.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,519 copying build/lib/MDAnalysisTests/analysis/test_base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,523 copying build/lib/MDAnalysisTests/analysis/test_dihedrals.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,527 copying build/lib/MDAnalysisTests/analysis/test_psa.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,532 copying build/lib/MDAnalysisTests/analysis/test_encore.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,538 copying build/lib/MDAnalysisTests/analysis/test_data.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,541 copying build/lib/MDAnalysisTests/analysis/test_nucleicacids.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,544 copying build/lib/MDAnalysisTests/analysis/test_distances.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,548 copying build/lib/MDAnalysisTests/analysis/test_hole2.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,553 copying build/lib/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,558 copying build/lib/MDAnalysisTests/analysis/test_rdf_s.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,561 copying build/lib/MDAnalysisTests/analysis/test_align.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,566 copying build/lib/MDAnalysisTests/analysis/test_lineardensity.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,570 copying build/lib/MDAnalysisTests/analysis/test_bat.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,574 copying build/lib/MDAnalysisTests/analysis/test_msd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,579 copying build/lib/MDAnalysisTests/analysis/test_gnm.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,582 copying build/lib/MDAnalysisTests/analysis/test_contacts.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,587 copying build/lib/MDAnalysisTests/analysis/test_rdf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,590 copying build/lib/MDAnalysisTests/analysis/test_waterdynamics.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,594 copying build/lib/MDAnalysisTests/analysis/test_dielectric.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,598 copying build/lib/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,602 copying build/lib/MDAnalysisTests/analysis/test_nuclinfo.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,606 copying build/lib/MDAnalysisTests/analysis/test_rms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,610 copying build/lib/MDAnalysisTests/analysis/test_helix_analysis.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,615 copying build/lib/MDAnalysisTests/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,618 copying build/lib/MDAnalysisTests/analysis/test_wbridge.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,623 copying build/lib/MDAnalysisTests/analysis/test_persistencelength.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2022-06-02T19:37:17,628 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/visualization 2022-06-02T19:37:17,629 copying build/lib/MDAnalysisTests/visualization/test_streamlines.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/visualization 2022-06-02T19:37:17,633 copying build/lib/MDAnalysisTests/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/visualization 2022-06-02T19:37:17,636 copying build/lib/MDAnalysisTests/util.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2022-06-02T19:37:17,642 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,643 copying build/lib/MDAnalysisTests/core/test_group_traj_access.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,648 copying build/lib/MDAnalysisTests/core/test_accessors.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,651 copying build/lib/MDAnalysisTests/core/util.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,656 copying build/lib/MDAnalysisTests/core/test_unwrap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,660 copying build/lib/MDAnalysisTests/core/test_wrap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,665 copying build/lib/MDAnalysisTests/core/test_residuegroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,669 copying build/lib/MDAnalysisTests/core/test_updating_atomgroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,673 copying build/lib/MDAnalysisTests/core/test_universe.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,680 copying build/lib/MDAnalysisTests/core/test_fragments.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,683 copying build/lib/MDAnalysisTests/core/test_groups.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,690 copying build/lib/MDAnalysisTests/core/test_topology.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,696 copying build/lib/MDAnalysisTests/core/test_atomselections.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,703 copying build/lib/MDAnalysisTests/core/test_copying.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,707 copying build/lib/MDAnalysisTests/core/test_topologyattrs.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,713 copying build/lib/MDAnalysisTests/core/test_segmentgroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,717 copying build/lib/MDAnalysisTests/core/test_atomgroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,724 copying build/lib/MDAnalysisTests/core/test_segment.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,728 copying build/lib/MDAnalysisTests/core/test_index_dtype.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,731 copying build/lib/MDAnalysisTests/core/test_residue.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,734 copying build/lib/MDAnalysisTests/core/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,737 copying build/lib/MDAnalysisTests/core/test_accumulate.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,740 copying build/lib/MDAnalysisTests/core/test_atom.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,744 copying build/lib/MDAnalysisTests/core/test_requires.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,748 copying build/lib/MDAnalysisTests/core/test_topologyobjects.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2022-06-02T19:37:17,754 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,756 copying build/lib/MDAnalysisTests/transformations/test_wrap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,760 copying build/lib/MDAnalysisTests/transformations/test_base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,763 copying build/lib/MDAnalysisTests/transformations/test_fit.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,767 copying build/lib/MDAnalysisTests/transformations/test_positionaveraging.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,771 copying build/lib/MDAnalysisTests/transformations/test_rotate.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,775 copying build/lib/MDAnalysisTests/transformations/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,778 copying build/lib/MDAnalysisTests/transformations/test_translate.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,783 copying build/lib/MDAnalysisTests/transformations/test_boxdimensions.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2022-06-02T19:37:17,787 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,788 copying build/lib/MDAnalysisTests/lib/test_neighborsearch.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,792 copying build/lib/MDAnalysisTests/lib/test_cutil.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,795 copying build/lib/MDAnalysisTests/lib/test_nsgrid.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,800 copying build/lib/MDAnalysisTests/lib/test_distances.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,809 copying build/lib/MDAnalysisTests/lib/test_pkdtree.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,813 copying build/lib/MDAnalysisTests/lib/test_log.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,816 copying build/lib/MDAnalysisTests/lib/test_util.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,825 copying build/lib/MDAnalysisTests/lib/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,827 copying build/lib/MDAnalysisTests/lib/test_augment.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2022-06-02T19:37:17,831 copying build/lib/MDAnalysisTests/test_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2022-06-02T19:37:17,836 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2022-06-02T19:37:17,838 copying build/lib/MDAnalysisTests/import/fork_called.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2022-06-02T19:37:17,841 copying build/lib/MDAnalysisTests/import/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2022-06-02T19:37:17,845 copying build/lib/MDAnalysisTests/import/test_import.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2022-06-02T19:37:17,848 copying build/lib/MDAnalysisTests/dummy.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2022-06-02T19:37:17,854 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,856 copying build/lib/MDAnalysisTests/topology/test_mmtf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,860 copying build/lib/MDAnalysisTests/topology/test_txyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,863 copying build/lib/MDAnalysisTests/topology/test_xyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,868 copying build/lib/MDAnalysisTests/topology/test_minimal.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,871 copying build/lib/MDAnalysisTests/topology/test_topology_base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,875 copying build/lib/MDAnalysisTests/topology/test_gsd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,878 copying build/lib/MDAnalysisTests/topology/test_crd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,881 copying build/lib/MDAnalysisTests/topology/test_dms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,884 copying build/lib/MDAnalysisTests/topology/test_pqr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,888 copying build/lib/MDAnalysisTests/topology/test_gms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,891 copying build/lib/MDAnalysisTests/topology/test_top.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,896 copying build/lib/MDAnalysisTests/topology/test_itp.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,900 copying build/lib/MDAnalysisTests/topology/test_dlpoly.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,904 copying build/lib/MDAnalysisTests/topology/test_mol2.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,908 copying build/lib/MDAnalysisTests/topology/test_hoomdxml.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,911 copying build/lib/MDAnalysisTests/topology/test_tprparser.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,916 copying build/lib/MDAnalysisTests/topology/test_guessers.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,920 copying build/lib/MDAnalysisTests/topology/test_lammpsdata.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,925 copying build/lib/MDAnalysisTests/topology/test_pdbqt.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,928 copying build/lib/MDAnalysisTests/topology/test_xpdb.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,931 copying build/lib/MDAnalysisTests/topology/test_psf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,935 copying build/lib/MDAnalysisTests/topology/test_topology_str_types.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,938 copying build/lib/MDAnalysisTests/topology/test_gro.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,941 copying build/lib/MDAnalysisTests/topology/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,944 copying build/lib/MDAnalysisTests/topology/test_altloc.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,947 copying build/lib/MDAnalysisTests/topology/test_pdb.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,951 copying build/lib/MDAnalysisTests/topology/test_fhiaims.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,954 copying build/lib/MDAnalysisTests/topology/base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2022-06-02T19:37:17,963 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:17,966 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:17,967 copying build/lib/MDAnalysisTests/data/analysis/align_unbound.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:17,971 copying build/lib/MDAnalysisTests/data/analysis/YiiP_lipids.gro.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:18,033 copying build/lib/MDAnalysisTests/data/analysis/YiiP_lipids.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:18,085 copying build/lib/MDAnalysisTests/data/analysis/1k5i_c36.psf.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:18,103 copying build/lib/MDAnalysisTests/data/analysis/1k5i_c36.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:18,122 copying build/lib/MDAnalysisTests/data/analysis/align_bound.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2022-06-02T19:37:18,125 copying build/lib/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,132 copying build/lib/MDAnalysisTests/data/model_then_cryst.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,136 copying build/lib/MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8.dat -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,140 copying build/lib/MDAnalysisTests/data/sample_velocity_file.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,143 copying build/lib/MDAnalysisTests/data/2r9r-1b.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,163 copying build/lib/MDAnalysisTests/data/nucl_res.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,166 copying build/lib/MDAnalysisTests/data/adk_oplsaa_dihedral_list.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,170 copying build/lib/MDAnalysisTests/data/residwrap.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,174 copying build/lib/MDAnalysisTests/data/1a28.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,182 copying build/lib/MDAnalysisTests/data/adk_oplsaa.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,675 copying build/lib/MDAnalysisTests/data/SiN_tric_namd.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,715 copying build/lib/MDAnalysisTests/data/5a7u.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,721 copying build/lib/MDAnalysisTests/data/adk_open.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,743 copying build/lib/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,747 copying build/lib/MDAnalysisTests/data/cobrotoxin.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,787 copying build/lib/MDAnalysisTests/data/missing_atomname.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,790 copying build/lib/MDAnalysisTests/data/pdbqt_querypdb.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,795 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2022-06-02T19:37:18,796 copying build/lib/MDAnalysisTests/data/gms/c1opt.gms.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2022-06-02T19:37:18,801 copying build/lib/MDAnalysisTests/data/gms/surf2wat.gms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2022-06-02T19:37:18,806 copying build/lib/MDAnalysisTests/data/gms/symopt.gms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2022-06-02T19:37:18,816 copying build/lib/MDAnalysisTests/data/RANDOM_WALK_TOPO.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,819 copying build/lib/MDAnalysisTests/data/adk_open.coor -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,827 copying build/lib/MDAnalysisTests/data/chainIDnewres.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,830 copying build/lib/MDAnalysisTests/data/fhiaims.in -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,833 copying build/lib/MDAnalysisTests/data/surface.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,836 copying build/lib/MDAnalysisTests/data/SINGLECONECT.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:18,841 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:18,843 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:18,846 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:18,851 copying build/lib/MDAnalysisTests/data/Amber/anti_md1.mdcrd.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:18,903 copying build/lib/MDAnalysisTests/data/Amber/parmed_fad.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:18,915 copying build/lib/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:18,921 copying build/lib/MDAnalysisTests/data/Amber/bala.trj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,000 copying build/lib/MDAnalysisTests/data/Amber/parmed_ala2_solv.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,033 copying build/lib/MDAnalysisTests/data/Amber/bala.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,060 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,063 copying build/lib/MDAnalysisTests/data/Amber/ace_tip3p.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,098 copying build/lib/MDAnalysisTests/data/Amber/posfor.ncdf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,105 copying build/lib/MDAnalysisTests/data/Amber/ace_tip3p.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,123 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,126 copying build/lib/MDAnalysisTests/data/Amber/test.inpcrd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,129 copying build/lib/MDAnalysisTests/data/Amber/anti.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,209 copying build/lib/MDAnalysisTests/data/Amber/chitosan.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,221 copying build/lib/MDAnalysisTests/data/Amber/tz2.truncoct.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,256 copying build/lib/MDAnalysisTests/data/Amber/capped-ala.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,297 copying build/lib/MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,301 copying build/lib/MDAnalysisTests/data/Amber/ache.mdcrd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,308 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.error3.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,311 copying build/lib/MDAnalysisTests/data/Amber/ache.mdcrd.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,315 copying build/lib/MDAnalysisTests/data/Amber/bala.ncdf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,367 copying build/lib/MDAnalysisTests/data/Amber/ache.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,377 copying build/lib/MDAnalysisTests/data/Amber/capped-ala.mdcrd.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,398 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,402 copying build/lib/MDAnalysisTests/data/Amber/posfor.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,417 copying build/lib/MDAnalysisTests/data/Amber/parmed_ala2_solv.rst7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2022-06-02T19:37:19,426 copying build/lib/MDAnalysisTests/data/trzfile.trz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,488 copying build/lib/MDAnalysisTests/data/plength.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,539 copying build/lib/MDAnalysisTests/data/1ubq-less-optional.mmtf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,543 copying build/lib/MDAnalysisTests/data/namd_cgenff.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,548 copying build/lib/MDAnalysisTests/data/namd_cgenff.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,553 copying build/lib/MDAnalysisTests/data/molecule.sdf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,557 copying build/lib/MDAnalysisTests/data/unordered_res.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,563 copying build/lib/MDAnalysisTests/data/cobrotoxin.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,675 copying build/lib/MDAnalysisTests/data/adk_open.crd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,691 copying build/lib/MDAnalysisTests/data/A6PA6_alpha.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,696 copying build/lib/MDAnalysisTests/data/test.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,700 copying build/lib/MDAnalysisTests/data/test_highf.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,704 copying build/lib/MDAnalysisTests/data/bigbox.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,767 copying build/lib/MDAnalysisTests/data/empty_atom.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,770 copying build/lib/MDAnalysisTests/data/surface.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,773 copying build/lib/MDAnalysisTests/data/4E43.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,787 copying build/lib/MDAnalysisTests/data/cryst_then_model.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,791 copying build/lib/MDAnalysisTests/data/empty.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,793 copying build/lib/MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8_frames10to79.dat -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,798 copying build/lib/MDAnalysisTests/data/5digitResid.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,801 copying build/lib/MDAnalysisTests/data/adk_oplsaa.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,966 copying build/lib/MDAnalysisTests/data/dppc_vesicle_hg.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,973 copying build/lib/MDAnalysisTests/data/adk_closed_no_segid.dms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,991 copying build/lib/MDAnalysisTests/data/huge_box.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,994 copying build/lib/MDAnalysisTests/data/3NJW-onlyrequired.mmtf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:19,998 copying build/lib/MDAnalysisTests/data/align.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,001 copying build/lib/MDAnalysisTests/data/adk_oplsaa_dihedral.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,004 copying build/lib/MDAnalysisTests/data/example.gsd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,030 copying build/lib/MDAnalysisTests/data/2r9r-1b.xyz.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,041 copying build/lib/MDAnalysisTests/data/nosegid.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,045 copying build/lib/MDAnalysisTests/data/spce.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,048 copying build/lib/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,052 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,053 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,067 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_minimal -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,070 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_order -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,073 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_classic -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,076 copying build/lib/MDAnalysisTests/data/dlpoly/CONFIG_order -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,079 copying build/lib/MDAnalysisTests/data/dlpoly/CONFIG -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,085 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_minimal_cell -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,088 copying build/lib/MDAnalysisTests/data/dlpoly/CONFIG_minimal -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2022-06-02T19:37:20,092 copying build/lib/MDAnalysisTests/data/2r9r-1b.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,115 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,117 copying build/lib/MDAnalysisTests/data/lammps/albite_triclinic.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,121 copying build/lib/MDAnalysisTests/data/lammps/hydrogen-class1.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,125 copying build/lib/MDAnalysisTests/data/lammps/spce_all_coords.lammpstrj.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,225 copying build/lib/MDAnalysisTests/data/lammps/mini.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,229 copying build/lib/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,249 copying build/lib/MDAnalysisTests/data/lammps/ifabp_apo_100mM.in -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,252 copying build/lib/MDAnalysisTests/data/lammps/ifabp_apo_100mM.data.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,271 copying build/lib/MDAnalysisTests/data/lammps/wat.lammpstrj.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,274 copying build/lib/MDAnalysisTests/data/lammps/datatest.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,443 copying build/lib/MDAnalysisTests/data/lammps/hydrogen-class1.data2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,446 copying build/lib/MDAnalysisTests/data/lammps/albite_triclinic.dump -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,449 copying build/lib/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,490 copying build/lib/MDAnalysisTests/data/lammps/datatest.trz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,513 copying build/lib/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,531 copying build/lib/MDAnalysisTests/data/lammps/wat.lammpstrj_long.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,535 copying build/lib/MDAnalysisTests/data/lammps/spce_no_coords.lammpstrj.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,540 copying build/lib/MDAnalysisTests/data/lammps/deletedatoms.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2022-06-02T19:37:20,544 copying build/lib/MDAnalysisTests/data/two_water_gro.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,547 copying build/lib/MDAnalysisTests/data/two_water_gro_widebox.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,550 copying build/lib/MDAnalysisTests/data/adk_closed_NAMD.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,594 copying build/lib/MDAnalysisTests/data/legacy_DCD_c36_coords.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,598 copying build/lib/MDAnalysisTests/data/adk_open.pqr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,619 copying build/lib/MDAnalysisTests/data/bad_num_col.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,622 copying build/lib/MDAnalysisTests/data/gromacs_ala10.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,625 copying build/lib/MDAnalysisTests/data/5KIH.mmtf.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,629 copying build/lib/MDAnalysisTests/data/no_endif_spc.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,633 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2022-06-02T19:37:20,634 copying build/lib/MDAnalysisTests/data/contacts/villin_unfolded.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2022-06-02T19:37:20,643 copying build/lib/MDAnalysisTests/data/contacts/2F4K_qlist5_remap.dat -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2022-06-02T19:37:20,647 copying build/lib/MDAnalysisTests/data/contacts/villin_folded.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2022-06-02T19:37:20,656 copying build/lib/MDAnalysisTests/data/tip5p.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,659 copying build/lib/MDAnalysisTests/data/five.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,662 copying build/lib/MDAnalysisTests/data/adk_oplsaa_rama.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,668 copying build/lib/MDAnalysisTests/data/cobrotoxin.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,748 copying build/lib/MDAnalysisTests/data/19hc.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,763 copying build/lib/MDAnalysisTests/data/bad_top.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,766 copying build/lib/MDAnalysisTests/data/test_lowf.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,770 copying build/lib/MDAnalysisTests/data/make_whole.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,773 copying build/lib/MDAnalysisTests/data/tip125_tric_C36.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,781 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge 2022-06-02T19:37:20,784 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:20,785 copying build/lib/MDAnalysisTests/data/merge/2zmm/protein.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:20,805 copying build/lib/MDAnalysisTests/data/merge/2zmm/ligand.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:20,808 copying build/lib/MDAnalysisTests/data/merge/2zmm/water.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2022-06-02T19:37:20,813 copying build/lib/MDAnalysisTests/data/adk_oplsaa.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,926 copying build/lib/MDAnalysisTests/data/fullerene.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,929 copying build/lib/MDAnalysisTests/data/adk_closed.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,946 copying build/lib/MDAnalysisTests/data/chainIDrepeat.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,949 copying build/lib/MDAnalysisTests/data/xyz_random_walk.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,956 copying build/lib/MDAnalysisTests/data/mini.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,959 copying build/lib/MDAnalysisTests/data/cryst_then_model.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,963 copying build/lib/MDAnalysisTests/data/1hvr.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,976 copying build/lib/MDAnalysisTests/data/SiN_tric_namd.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:20,982 copying build/lib/MDAnalysisTests/data/adk_oplsaa.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,069 copying build/lib/MDAnalysisTests/data/xl_serial.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,072 copying build/lib/MDAnalysisTests/data/173D.mmtf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,076 copying build/lib/MDAnalysisTests/data/1grm_single.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,081 copying build/lib/MDAnalysisTests/data/model_then_cryst.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,084 copying build/lib/MDAnalysisTests/data/adk_gbis_tmd-fast1_NAMD.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,291 copying build/lib/MDAnalysisTests/data/cobrotoxin.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,304 copying build/lib/MDAnalysisTests/data/grovels.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,308 copying build/lib/MDAnalysisTests/data/example_longer.gsd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,416 copying build/lib/MDAnalysisTests/data/1grm_elNemo_mode7.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,421 copying build/lib/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,438 copying build/lib/MDAnalysisTests/data/cobrotoxin_dry_neutral_0.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,448 copying build/lib/MDAnalysisTests/data/CONECT2TER.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,451 copying build/lib/MDAnalysisTests/data/trz_psf.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,487 copying build/lib/MDAnalysisTests/data/adk_oplsaa_janin.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,493 copying build/lib/MDAnalysisTests/data/elements.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,496 copying build/lib/MDAnalysisTests/data/adk_closed.dms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,518 copying build/lib/MDAnalysisTests/data/martini_dppc_chol_bilayer.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,539 copying build/lib/MDAnalysisTests/data/1osm.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,545 copying build/lib/MDAnalysisTests/data/conect_parsing.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,548 copying build/lib/MDAnalysisTests/data/cobrotoxin.h5md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,669 copying build/lib/MDAnalysisTests/data/adk_dims.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,880 copying build/lib/MDAnalysisTests/data/1A2C.pqr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,911 copying build/lib/MDAnalysisTests/data/adk.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,965 copying build/lib/MDAnalysisTests/data/legacy_DCD_adk_coords.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,973 copying build/lib/MDAnalysisTests/data/sameresid_diffresname.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,977 copying build/lib/MDAnalysisTests/data/gromacs_ala10.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:21,983 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2022-06-02T19:37:21,984 copying build/lib/MDAnalysisTests/data/capping/maestro_aaqaa_capped.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2022-06-02T19:37:21,990 copying build/lib/MDAnalysisTests/data/capping/aaqaa.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2022-06-02T19:37:21,994 copying build/lib/MDAnalysisTests/data/capping/ace.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2022-06-02T19:37:21,997 copying build/lib/MDAnalysisTests/data/capping/nma.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2022-06-02T19:37:22,000 copying build/lib/MDAnalysisTests/data/testENT.ent -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,003 copying build/lib/MDAnalysisTests/data/nmr_neopetrosiamide.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,058 copying build/lib/MDAnalysisTests/data/two_water_gro_nonames.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,061 copying build/lib/MDAnalysisTests/data/watdyn.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,065 copying build/lib/MDAnalysisTests/data/two_water_gro_multiframe.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,069 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,070 copying build/lib/MDAnalysisTests/data/mol2/sodium_ion.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,073 copying build/lib/MDAnalysisTests/data/mol2/zinc_856218.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,077 copying build/lib/MDAnalysisTests/data/mol2/Molecule_comments_header.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,081 copying build/lib/MDAnalysisTests/data/mol2/Molecules.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,131 copying build/lib/MDAnalysisTests/data/mol2/Ligand.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,137 copying build/lib/MDAnalysisTests/data/mol2/BrokenMolecule.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,141 copying build/lib/MDAnalysisTests/data/mol2/Molecule.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2022-06-02T19:37:22,146 copying build/lib/MDAnalysisTests/data/edited_itp.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,151 copying build/lib/MDAnalysisTests/data/adk_oplsaa_CA_rmsf.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,155 copying build/lib/MDAnalysisTests/data/adk_dims2.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,365 copying build/lib/MDAnalysisTests/data/mol2_comments_header_bat.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,370 copying build/lib/MDAnalysisTests/data/atomtypes.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,373 copying build/lib/MDAnalysisTests/data/watdyn.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,377 copying build/lib/MDAnalysisTests/data/adk_oplsaa_LYS_janin.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,381 copying build/lib/MDAnalysisTests/data/cryst_then_model.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,385 copying build/lib/MDAnalysisTests/data/6QYR.mmtf.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,390 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,392 copying build/lib/MDAnalysisTests/data/coordinates/test.h5md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,403 copying build/lib/MDAnalysisTests/data/coordinates/create_h5md_data.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,407 copying build/lib/MDAnalysisTests/data/coordinates/test_incomplete_vel.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,411 copying build/lib/MDAnalysisTests/data/coordinates/test.xyz.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,414 copying build/lib/MDAnalysisTests/data/coordinates/test.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,418 copying build/lib/MDAnalysisTests/data/coordinates/new_hexane.arc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,422 copying build/lib/MDAnalysisTests/data/coordinates/test.txyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,426 copying build/lib/MDAnalysisTests/data/coordinates/test.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,430 copying build/lib/MDAnalysisTests/data/coordinates/test.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,434 copying build/lib/MDAnalysisTests/data/coordinates/test.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,437 copying build/lib/MDAnalysisTests/data/coordinates/test.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,441 copying build/lib/MDAnalysisTests/data/coordinates/create_data.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,445 copying build/lib/MDAnalysisTests/data/coordinates/test_topology.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,449 copying build/lib/MDAnalysisTests/data/coordinates/test.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,452 copying build/lib/MDAnalysisTests/data/coordinates/README.md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,456 copying build/lib/MDAnalysisTests/data/coordinates/test.arc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2022-06-02T19:37:22,460 copying build/lib/MDAnalysisTests/data/cobrotoxin_protein_forces.xvg.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,467 copying build/lib/MDAnalysisTests/data/6msm.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:22,481 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,483 copying build/lib/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,585 copying build/lib/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,683 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,720 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,752 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,789 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,895 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:22,931 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,933 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,938 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,943 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,948 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,954 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,959 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2022-06-02T19:37:22,965 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,004 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,036 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,067 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,098 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,137 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,168 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,198 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,233 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,269 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,302 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,333 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,363 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,395 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,425 copying build/lib/MDAnalysisTests/data/tprs/drew_gmx_4.5.5.double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,495 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,524 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,562 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,593 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,628 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,660 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,694 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2022-06-02T19:37:23,729 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,730 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,735 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,740 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,743 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.mdp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,747 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,751 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,755 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,759 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,762 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,766 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,770 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,773 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy.mdp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,776 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,786 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,790 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,794 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2022-06-02T19:37:23,798 copying build/lib/MDAnalysisTests/data/test.fasta -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:23,801 copying build/lib/MDAnalysisTests/data/adk_oplsaa_GLY_rama.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:23,804 copying build/lib/MDAnalysisTests/data/sameresid_diffresname.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:23,809 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,810 copying build/lib/MDAnalysisTests/data/windows/WIN_HISTORY -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,826 copying build/lib/MDAnalysisTests/data/windows/WIN_wat.lammpstrj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,830 copying build/lib/MDAnalysisTests/data/windows/WIN_nmr_neopetrosiamide.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,876 copying build/lib/MDAnalysisTests/data/windows/WIN_ache.mdcrd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,883 copying build/lib/MDAnalysisTests/data/windows/README.md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,887 copying build/lib/MDAnalysisTests/data/windows/WIN_test.arc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2022-06-02T19:37:23,890 copying build/lib/MDAnalysisTests/data/incomplete.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:23,893 copying build/lib/MDAnalysisTests/data/adk_oplsaa.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,010 copying build/lib/MDAnalysisTests/data/adk_notop.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,033 copying build/lib/MDAnalysisTests/data/residwrap_0base.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,038 copying build/lib/MDAnalysisTests/data/atomtypes_charge.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,041 copying build/lib/MDAnalysisTests/data/adk_closed_domains.dms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,072 copying build/lib/MDAnalysisTests/data/C12x64.xml.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,077 copying build/lib/MDAnalysisTests/data/model_then_cryst.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,083 copying build/lib/MDAnalysisTests/data/itp_nomass.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,089 copying build/lib/MDAnalysisTests/data/example_bonds.gsd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,096 copying build/lib/MDAnalysisTests/data/parmed_ala3.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,102 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs 2022-06-02T19:37:24,104 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,106 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,111 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,114 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ff_dum.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,117 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,127 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ions.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,131 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/test.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,134 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/spc.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2022-06-02T19:37:24,138 copying build/lib/MDAnalysisTests/data/tip125_tric_C36.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,144 copying build/lib/MDAnalysisTests/data/adk_notop_BAD.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2022-06-02T19:37:24,164 copying build/lib/MDAnalysisTests/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2022-06-02T19:37:24,169 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2022-06-02T19:37:24,171 copying build/lib/MDAnalysisTests/formats/test_libdcd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2022-06-02T19:37:24,176 copying build/lib/MDAnalysisTests/formats/test_libmdaxdr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2022-06-02T19:37:24,181 copying build/lib/MDAnalysisTests/formats/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2022-06-02T19:37:24,188 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,192 copying build/lib/MDAnalysisTests/coordinates/test_mmtf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,196 copying build/lib/MDAnalysisTests/coordinates/test_txyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,200 copying build/lib/MDAnalysisTests/coordinates/test_namdbin.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,204 copying build/lib/MDAnalysisTests/coordinates/reference.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,209 copying build/lib/MDAnalysisTests/coordinates/test_xyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,213 copying build/lib/MDAnalysisTests/coordinates/test_memory.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,218 copying build/lib/MDAnalysisTests/coordinates/test_writer_registration.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,222 copying build/lib/MDAnalysisTests/coordinates/test_trj.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,227 copying build/lib/MDAnalysisTests/coordinates/test_trz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,232 copying build/lib/MDAnalysisTests/coordinates/test_xdr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,238 copying build/lib/MDAnalysisTests/coordinates/test_gsd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,242 copying build/lib/MDAnalysisTests/coordinates/test_writer_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,247 copying build/lib/MDAnalysisTests/coordinates/test_windows.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,251 copying build/lib/MDAnalysisTests/coordinates/test_crd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,256 copying build/lib/MDAnalysisTests/coordinates/test_dms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,260 copying build/lib/MDAnalysisTests/coordinates/test_pqr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,264 copying build/lib/MDAnalysisTests/coordinates/test_gms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,268 copying build/lib/MDAnalysisTests/coordinates/test_dcd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,274 copying build/lib/MDAnalysisTests/coordinates/test_copying.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,279 copying build/lib/MDAnalysisTests/coordinates/test_chainreader.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,285 copying build/lib/MDAnalysisTests/coordinates/test_timestep_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,290 copying build/lib/MDAnalysisTests/coordinates/test_dlpoly.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,295 copying build/lib/MDAnalysisTests/coordinates/test_mol2.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,300 copying build/lib/MDAnalysisTests/coordinates/test_netcdf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,306 copying build/lib/MDAnalysisTests/coordinates/test_chemfiles.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,311 copying build/lib/MDAnalysisTests/coordinates/test_h5md.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,318 copying build/lib/MDAnalysisTests/coordinates/test_pdbqt.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,321 copying build/lib/MDAnalysisTests/coordinates/test_null.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,325 copying build/lib/MDAnalysisTests/coordinates/test_gro.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,330 copying build/lib/MDAnalysisTests/coordinates/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,333 copying build/lib/MDAnalysisTests/coordinates/test_pdb.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,340 copying build/lib/MDAnalysisTests/coordinates/test_fhiaims.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,344 copying build/lib/MDAnalysisTests/coordinates/test_amber_inpcrd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,347 copying build/lib/MDAnalysisTests/coordinates/base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,353 copying build/lib/MDAnalysisTests/coordinates/test_reader_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,358 copying build/lib/MDAnalysisTests/coordinates/test_lammps.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2022-06-02T19:37:24,363 copying build/lib/MDAnalysisTests/datafiles.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2022-06-02T19:37:24,370 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2022-06-02T19:37:24,371 copying build/lib/MDAnalysisTests/auxiliary/test_core.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2022-06-02T19:37:24,375 copying build/lib/MDAnalysisTests/auxiliary/test_xvg.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2022-06-02T19:37:24,379 copying build/lib/MDAnalysisTests/auxiliary/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2022-06-02T19:37:24,381 copying build/lib/MDAnalysisTests/auxiliary/base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2022-06-02T19:37:24,387 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,389 copying build/lib/MDAnalysisTests/utils/test_pickleio.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,393 copying build/lib/MDAnalysisTests/utils/test_imports.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,396 copying build/lib/MDAnalysisTests/utils/test_datafiles.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,399 copying build/lib/MDAnalysisTests/utils/test_selections.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,403 copying build/lib/MDAnalysisTests/utils/test_streamio.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,409 copying build/lib/MDAnalysisTests/utils/test_transformations.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,414 copying build/lib/MDAnalysisTests/utils/test_units.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,417 copying build/lib/MDAnalysisTests/utils/test_qcprot.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,421 copying build/lib/MDAnalysisTests/utils/test_log.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,425 copying build/lib/MDAnalysisTests/utils/test_persistence.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,428 copying build/lib/MDAnalysisTests/utils/test_meta.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,432 copying build/lib/MDAnalysisTests/utils/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,434 copying build/lib/MDAnalysisTests/utils/test_duecredit.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,438 copying build/lib/MDAnalysisTests/utils/test_modelling.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,443 copying build/lib/MDAnalysisTests/utils/test_failure.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,447 copying build/lib/MDAnalysisTests/utils/test_authors.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2022-06-02T19:37:24,449 running install_egg_info 2022-06-02T19:37:25,699 running egg_info 2022-06-02T19:37:26,308 writing MDAnalysisTests.egg-info/PKG-INFO 2022-06-02T19:37:26,875 writing dependency_links to MDAnalysisTests.egg-info/dependency_links.txt 2022-06-02T19:37:29,691 writing requirements to MDAnalysisTests.egg-info/requires.txt 2022-06-02T19:37:30,257 writing top-level names to MDAnalysisTests.egg-info/top_level.txt 2022-06-02T19:37:30,638 reading manifest file 'MDAnalysisTests.egg-info/SOURCES.txt' 2022-06-02T19:37:30,669 reading manifest template 'MANIFEST.in' 2022-06-02T19:37:30,672 warning: no files found matching 'TODO' 2022-06-02T19:37:30,672 warning: no files found matching 'SUMMARY.txt' 2022-06-02T19:37:30,752 warning: no previously-included files matching '*~' found anywhere in distribution 2022-06-02T19:37:30,758 warning: no previously-included files matching '*.pkl' found anywhere in distribution 2022-06-02T19:37:30,759 adding license file 'LICENSE' 2022-06-02T19:37:30,759 adding license file 'AUTHORS' 2022-06-02T19:37:30,825 writing manifest file 'MDAnalysisTests.egg-info/SOURCES.txt' 2022-06-02T19:37:30,830 Copying MDAnalysisTests.egg-info to build/bdist.linux-armv7l/wheel/MDAnalysisTests-2.2.0-py3.9.egg-info 2022-06-02T19:37:30,857 running install_scripts 2022-06-02T19:37:31,029 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-02T19:37:31,031 adding license file "AUTHORS" (matched pattern "AUTHORS*") 2022-06-02T19:37:31,043 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests-2.2.0.dist-info/WHEEL 2022-06-02T19:37:31,048 creating '/tmp/pip-wheel-7lvn13dg/MDAnalysisTests-2.2.0-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-06-02T19:37:31,054 adding 'MDAnalysisTests/__init__.py' 2022-06-02T19:37:31,062 adding 'MDAnalysisTests/datafiles.py' 2022-06-02T19:37:31,066 adding 'MDAnalysisTests/dummy.py' 2022-06-02T19:37:31,069 adding 'MDAnalysisTests/test_api.py' 2022-06-02T19:37:31,073 adding 'MDAnalysisTests/util.py' 2022-06-02T19:37:31,077 adding 'MDAnalysisTests/analysis/__init__.py' 2022-06-02T19:37:31,083 adding 'MDAnalysisTests/analysis/test_align.py' 2022-06-02T19:37:31,088 adding 'MDAnalysisTests/analysis/test_base.py' 2022-06-02T19:37:31,091 adding 'MDAnalysisTests/analysis/test_bat.py' 2022-06-02T19:37:31,097 adding 'MDAnalysisTests/analysis/test_contacts.py' 2022-06-02T19:37:31,100 adding 'MDAnalysisTests/analysis/test_data.py' 2022-06-02T19:37:31,104 adding 'MDAnalysisTests/analysis/test_density.py' 2022-06-02T19:37:31,107 adding 'MDAnalysisTests/analysis/test_dielectric.py' 2022-06-02T19:37:31,110 adding 'MDAnalysisTests/analysis/test_diffusionmap.py' 2022-06-02T19:37:31,114 adding 'MDAnalysisTests/analysis/test_dihedrals.py' 2022-06-02T19:37:31,117 adding 'MDAnalysisTests/analysis/test_distances.py' 2022-06-02T19:37:31,126 adding 'MDAnalysisTests/analysis/test_encore.py' 2022-06-02T19:37:31,130 adding 'MDAnalysisTests/analysis/test_gnm.py' 2022-06-02T19:37:31,136 adding 'MDAnalysisTests/analysis/test_helix_analysis.py' 2022-06-02T19:37:31,144 adding 'MDAnalysisTests/analysis/test_hole2.py' 2022-06-02T19:37:31,148 adding 'MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py' 2022-06-02T19:37:31,151 adding 'MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py' 2022-06-02T19:37:31,156 adding 'MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py' 2022-06-02T19:37:31,160 adding 'MDAnalysisTests/analysis/test_leaflet.py' 2022-06-02T19:37:31,163 adding 'MDAnalysisTests/analysis/test_lineardensity.py' 2022-06-02T19:37:31,167 adding 'MDAnalysisTests/analysis/test_msd.py' 2022-06-02T19:37:31,169 adding 'MDAnalysisTests/analysis/test_nucleicacids.py' 2022-06-02T19:37:31,172 adding 'MDAnalysisTests/analysis/test_nuclinfo.py' 2022-06-02T19:37:31,177 adding 'MDAnalysisTests/analysis/test_pca.py' 2022-06-02T19:37:31,180 adding 'MDAnalysisTests/analysis/test_persistencelength.py' 2022-06-02T19:37:31,186 adding 'MDAnalysisTests/analysis/test_psa.py' 2022-06-02T19:37:31,189 adding 'MDAnalysisTests/analysis/test_rdf.py' 2022-06-02T19:37:31,191 adding 'MDAnalysisTests/analysis/test_rdf_s.py' 2022-06-02T19:37:31,196 adding 'MDAnalysisTests/analysis/test_rms.py' 2022-06-02T19:37:31,200 adding 'MDAnalysisTests/analysis/test_waterdynamics.py' 2022-06-02T19:37:31,206 adding 'MDAnalysisTests/analysis/test_wbridge.py' 2022-06-02T19:37:31,210 adding 'MDAnalysisTests/auxiliary/__init__.py' 2022-06-02T19:37:31,215 adding 'MDAnalysisTests/auxiliary/base.py' 2022-06-02T19:37:31,218 adding 'MDAnalysisTests/auxiliary/test_core.py' 2022-06-02T19:37:31,221 adding 'MDAnalysisTests/auxiliary/test_xvg.py' 2022-06-02T19:37:31,225 adding 'MDAnalysisTests/coordinates/__init__.py' 2022-06-02T19:37:31,233 adding 'MDAnalysisTests/coordinates/base.py' 2022-06-02T19:37:31,236 adding 'MDAnalysisTests/coordinates/reference.py' 2022-06-02T19:37:31,239 adding 'MDAnalysisTests/coordinates/test_amber_inpcrd.py' 2022-06-02T19:37:31,244 adding 'MDAnalysisTests/coordinates/test_chainreader.py' 2022-06-02T19:37:31,248 adding 'MDAnalysisTests/coordinates/test_chemfiles.py' 2022-06-02T19:37:31,252 adding 'MDAnalysisTests/coordinates/test_copying.py' 2022-06-02T19:37:31,255 adding 'MDAnalysisTests/coordinates/test_crd.py' 2022-06-02T19:37:31,260 adding 'MDAnalysisTests/coordinates/test_dcd.py' 2022-06-02T19:37:31,263 adding 'MDAnalysisTests/coordinates/test_dlpoly.py' 2022-06-02T19:37:31,266 adding 'MDAnalysisTests/coordinates/test_dms.py' 2022-06-02T19:37:31,269 adding 'MDAnalysisTests/coordinates/test_fhiaims.py' 2022-06-02T19:37:31,272 adding 'MDAnalysisTests/coordinates/test_gms.py' 2022-06-02T19:37:31,280 adding 'MDAnalysisTests/coordinates/test_gro.py' 2022-06-02T19:37:31,283 adding 'MDAnalysisTests/coordinates/test_gsd.py' 2022-06-02T19:37:31,290 adding 'MDAnalysisTests/coordinates/test_h5md.py' 2022-06-02T19:37:31,297 adding 'MDAnalysisTests/coordinates/test_lammps.py' 2022-06-02T19:37:31,302 adding 'MDAnalysisTests/coordinates/test_memory.py' 2022-06-02T19:37:31,305 adding 'MDAnalysisTests/coordinates/test_mmtf.py' 2022-06-02T19:37:31,308 adding 'MDAnalysisTests/coordinates/test_mol2.py' 2022-06-02T19:37:31,311 adding 'MDAnalysisTests/coordinates/test_namdbin.py' 2022-06-02T19:37:31,321 adding 'MDAnalysisTests/coordinates/test_netcdf.py' 2022-06-02T19:37:31,324 adding 'MDAnalysisTests/coordinates/test_null.py' 2022-06-02T19:37:31,336 adding 'MDAnalysisTests/coordinates/test_pdb.py' 2022-06-02T19:37:31,340 adding 'MDAnalysisTests/coordinates/test_pdbqt.py' 2022-06-02T19:37:31,343 adding 'MDAnalysisTests/coordinates/test_pqr.py' 2022-06-02T19:37:31,347 adding 'MDAnalysisTests/coordinates/test_reader_api.py' 2022-06-02T19:37:31,353 adding 'MDAnalysisTests/coordinates/test_timestep_api.py' 2022-06-02T19:37:31,356 adding 'MDAnalysisTests/coordinates/test_trj.py' 2022-06-02T19:37:31,360 adding 'MDAnalysisTests/coordinates/test_trz.py' 2022-06-02T19:37:31,363 adding 'MDAnalysisTests/coordinates/test_txyz.py' 2022-06-02T19:37:31,365 adding 'MDAnalysisTests/coordinates/test_windows.py' 2022-06-02T19:37:31,368 adding 'MDAnalysisTests/coordinates/test_writer_api.py' 2022-06-02T19:37:31,371 adding 'MDAnalysisTests/coordinates/test_writer_registration.py' 2022-06-02T19:37:31,379 adding 'MDAnalysisTests/coordinates/test_xdr.py' 2022-06-02T19:37:31,382 adding 'MDAnalysisTests/coordinates/test_xyz.py' 2022-06-02T19:37:31,386 adding 'MDAnalysisTests/core/__init__.py' 2022-06-02T19:37:31,389 adding 'MDAnalysisTests/core/test_accessors.py' 2022-06-02T19:37:31,392 adding 'MDAnalysisTests/core/test_accumulate.py' 2022-06-02T19:37:31,395 adding 'MDAnalysisTests/core/test_atom.py' 2022-06-02T19:37:31,410 adding 'MDAnalysisTests/core/test_atomgroup.py' 2022-06-02T19:37:31,424 adding 'MDAnalysisTests/core/test_atomselections.py' 2022-06-02T19:37:31,428 adding 'MDAnalysisTests/core/test_copying.py' 2022-06-02T19:37:31,432 adding 'MDAnalysisTests/core/test_fragments.py' 2022-06-02T19:37:31,436 adding 'MDAnalysisTests/core/test_group_traj_access.py' 2022-06-02T19:37:31,449 adding 'MDAnalysisTests/core/test_groups.py' 2022-06-02T19:37:31,453 adding 'MDAnalysisTests/core/test_index_dtype.py' 2022-06-02T19:37:31,456 adding 'MDAnalysisTests/core/test_requires.py' 2022-06-02T19:37:31,458 adding 'MDAnalysisTests/core/test_residue.py' 2022-06-02T19:37:31,462 adding 'MDAnalysisTests/core/test_residuegroup.py' 2022-06-02T19:37:31,464 adding 'MDAnalysisTests/core/test_segment.py' 2022-06-02T19:37:31,467 adding 'MDAnalysisTests/core/test_segmentgroup.py' 2022-06-02T19:37:31,472 adding 'MDAnalysisTests/core/test_topology.py' 2022-06-02T19:37:31,479 adding 'MDAnalysisTests/core/test_topologyattrs.py' 2022-06-02T19:37:31,485 adding 'MDAnalysisTests/core/test_topologyobjects.py' 2022-06-02T19:37:31,496 adding 'MDAnalysisTests/core/test_universe.py' 2022-06-02T19:37:31,501 adding 'MDAnalysisTests/core/test_unwrap.py' 2022-06-02T19:37:31,505 adding 'MDAnalysisTests/core/test_updating_atomgroup.py' 2022-06-02T19:37:31,510 adding 'MDAnalysisTests/core/test_wrap.py' 2022-06-02T19:37:31,516 adding 'MDAnalysisTests/core/util.py' 2022-06-02T19:37:31,528 adding 'MDAnalysisTests/data/173D.mmtf' 2022-06-02T19:37:31,595 adding 'MDAnalysisTests/data/19hc.pdb.gz' 2022-06-02T19:37:31,773 adding 'MDAnalysisTests/data/1A2C.pqr' 2022-06-02T19:37:31,807 adding 'MDAnalysisTests/data/1a28.pdb.gz' 2022-06-02T19:37:31,816 adding 'MDAnalysisTests/data/1grm_elNemo_mode7.pdb.bz2' 2022-06-02T19:37:31,826 adding 'MDAnalysisTests/data/1grm_single.pdb' 2022-06-02T19:37:31,903 adding 'MDAnalysisTests/data/1hvr.pdb' 2022-06-02T19:37:31,916 adding 'MDAnalysisTests/data/1osm.pdb.gz' 2022-06-02T19:37:31,920 adding 'MDAnalysisTests/data/1ubq-less-optional.mmtf' 2022-06-02T19:37:31,995 adding 'MDAnalysisTests/data/2r9r-1b.psf' 2022-06-02T19:37:32,296 adding 'MDAnalysisTests/data/2r9r-1b.xyz' 2022-06-02T19:37:32,327 adding 'MDAnalysisTests/data/2r9r-1b.xyz.bz2' 2022-06-02T19:37:32,331 adding 'MDAnalysisTests/data/3NJW-onlyrequired.mmtf' 2022-06-02T19:37:32,409 adding 'MDAnalysisTests/data/4E43.pdb' 2022-06-02T19:37:32,417 adding 'MDAnalysisTests/data/5KIH.mmtf.gz' 2022-06-02T19:37:32,434 adding 'MDAnalysisTests/data/5a7u.pdb' 2022-06-02T19:37:32,437 adding 'MDAnalysisTests/data/5digitResid.pdb' 2022-06-02T19:37:32,441 adding 'MDAnalysisTests/data/6QYR.mmtf.gz' 2022-06-02T19:37:32,483 adding 'MDAnalysisTests/data/6msm.pdb.bz2' 2022-06-02T19:37:32,491 adding 'MDAnalysisTests/data/A6PA6_alpha.pdb' 2022-06-02T19:37:32,495 adding 'MDAnalysisTests/data/C12x64.xml.bz2' 2022-06-02T19:37:32,497 adding 'MDAnalysisTests/data/CONECT2TER.pdb' 2022-06-02T19:37:32,501 adding 'MDAnalysisTests/data/RANDOM_WALK_TOPO.pdb' 2022-06-02T19:37:32,503 adding 'MDAnalysisTests/data/SINGLECONECT.pdb' 2022-06-02T19:37:32,527 adding 'MDAnalysisTests/data/SiN_tric_namd.dcd' 2022-06-02T19:37:32,697 adding 'MDAnalysisTests/data/SiN_tric_namd.psf' 2022-06-02T19:37:32,930 adding 'MDAnalysisTests/data/adk.psf' 2022-06-02T19:37:33,072 adding 'MDAnalysisTests/data/adk_closed.dms' 2022-06-02T19:37:33,490 adding 'MDAnalysisTests/data/adk_closed.pdb' 2022-06-02T19:37:33,711 adding 'MDAnalysisTests/data/adk_closed_NAMD.psf' 2022-06-02T19:37:33,854 adding 'MDAnalysisTests/data/adk_closed_domains.dms' 2022-06-02T19:37:33,990 adding 'MDAnalysisTests/data/adk_closed_no_segid.dms' 2022-06-02T19:37:35,495 adding 'MDAnalysisTests/data/adk_dims.dcd' 2022-06-02T19:37:37,193 adding 'MDAnalysisTests/data/adk_dims2.dcd' 2022-06-02T19:37:38,865 adding 'MDAnalysisTests/data/adk_gbis_tmd-fast1_NAMD.dcd' 2022-06-02T19:37:38,986 adding 'MDAnalysisTests/data/adk_notop.psf' 2022-06-02T19:37:39,034 adding 'MDAnalysisTests/data/adk_notop_BAD.psf' 2022-06-02T19:37:39,106 adding 'MDAnalysisTests/data/adk_open.coor' 2022-06-02T19:37:39,221 adding 'MDAnalysisTests/data/adk_open.crd' 2022-06-02T19:37:39,324 adding 'MDAnalysisTests/data/adk_open.pdb' 2022-06-02T19:37:39,434 adding 'MDAnalysisTests/data/adk_open.pqr' 2022-06-02T19:37:40,847 adding 'MDAnalysisTests/data/adk_oplsaa.gro' 2022-06-02T19:37:42,134 adding 'MDAnalysisTests/data/adk_oplsaa.pdb' 2022-06-02T19:37:43,044 adding 'MDAnalysisTests/data/adk_oplsaa.tpr' 2022-06-02T19:37:47,759 adding 'MDAnalysisTests/data/adk_oplsaa.trr' 2022-06-02T19:37:48,442 adding 'MDAnalysisTests/data/adk_oplsaa.xtc' 2022-06-02T19:37:48,479 adding 'MDAnalysisTests/data/adk_oplsaa_CA_rmsf.npy' 2022-06-02T19:37:48,482 adding 'MDAnalysisTests/data/adk_oplsaa_GLY_rama.npy' 2022-06-02T19:37:48,485 adding 'MDAnalysisTests/data/adk_oplsaa_LYS_janin.npy' 2022-06-02T19:37:48,488 adding 'MDAnalysisTests/data/adk_oplsaa_dihedral.npy' 2022-06-02T19:37:48,491 adding 'MDAnalysisTests/data/adk_oplsaa_dihedral_list.npy' 2022-06-02T19:37:48,498 adding 'MDAnalysisTests/data/adk_oplsaa_janin.npy' 2022-06-02T19:37:48,510 adding 'MDAnalysisTests/data/adk_oplsaa_rama.npy' 2022-06-02T19:37:48,513 adding 'MDAnalysisTests/data/align.pdb' 2022-06-02T19:37:48,516 adding 'MDAnalysisTests/data/atomtypes.itp' 2022-06-02T19:37:48,519 adding 'MDAnalysisTests/data/atomtypes_charge.itp' 2022-06-02T19:37:48,521 adding 'MDAnalysisTests/data/bad_num_col.xvg' 2022-06-02T19:37:48,524 adding 'MDAnalysisTests/data/bad_top.top' 2022-06-02T19:37:48,906 adding 'MDAnalysisTests/data/bigbox.gro.bz2' 2022-06-02T19:37:48,932 adding 'MDAnalysisTests/data/chainIDnewres.pdb.gz' 2022-06-02T19:37:48,935 adding 'MDAnalysisTests/data/chainIDrepeat.pdb.gz' 2022-06-02T19:37:49,753 adding 'MDAnalysisTests/data/cobrotoxin.h5md' 2022-06-02T19:37:50,316 adding 'MDAnalysisTests/data/cobrotoxin.pdb' 2022-06-02T19:37:50,643 adding 'MDAnalysisTests/data/cobrotoxin.tpr' 2022-06-02T19:37:51,439 adding 'MDAnalysisTests/data/cobrotoxin.trr' 2022-06-02T19:37:51,533 adding 'MDAnalysisTests/data/cobrotoxin.xtc' 2022-06-02T19:37:51,566 adding 'MDAnalysisTests/data/cobrotoxin_dry_neutral_0.pdb' 2022-06-02T19:37:51,581 adding 'MDAnalysisTests/data/cobrotoxin_protein_forces.xvg.bz2' 2022-06-02T19:37:51,585 adding 'MDAnalysisTests/data/conect_parsing.pdb' 2022-06-02T19:37:51,587 adding 'MDAnalysisTests/data/cryst_then_model.pdb' 2022-06-02T19:37:51,590 adding 'MDAnalysisTests/data/cryst_then_model.pdb.bz2' 2022-06-02T19:37:51,594 adding 'MDAnalysisTests/data/cryst_then_model.pdb.gz' 2022-06-02T19:37:51,632 adding 'MDAnalysisTests/data/dppc_vesicle_hg.gro' 2022-06-02T19:37:51,640 adding 'MDAnalysisTests/data/edited_itp.itp' 2022-06-02T19:37:51,643 adding 'MDAnalysisTests/data/elements.pdb' 2022-06-02T19:37:51,645 adding 'MDAnalysisTests/data/empty.dcd' 2022-06-02T19:37:51,648 adding 'MDAnalysisTests/data/empty_atom.gro' 2022-06-02T19:37:51,728 adding 'MDAnalysisTests/data/example.gsd' 2022-06-02T19:37:51,750 adding 'MDAnalysisTests/data/example_bonds.gsd' 2022-06-02T19:37:52,102 adding 'MDAnalysisTests/data/example_longer.gsd' 2022-06-02T19:37:52,142 adding 'MDAnalysisTests/data/fhiaims.in' 2022-06-02T19:37:52,144 adding 'MDAnalysisTests/data/five.xyz' 2022-06-02T19:37:52,147 adding 'MDAnalysisTests/data/fullerene.pdb.gz' 2022-06-02T19:37:52,153 adding 'MDAnalysisTests/data/gromacs_ala10.itp' 2022-06-02T19:37:52,156 adding 'MDAnalysisTests/data/gromacs_ala10.top' 2022-06-02T19:37:52,159 adding 'MDAnalysisTests/data/grovels.gro' 2022-06-02T19:37:52,164 adding 'MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8.dat' 2022-06-02T19:37:52,169 adding 'MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8_frames10to79.dat' 2022-06-02T19:37:52,171 adding 'MDAnalysisTests/data/huge_box.gro' 2022-06-02T19:37:52,174 adding 'MDAnalysisTests/data/incomplete.pdb' 2022-06-02T19:37:52,180 adding 'MDAnalysisTests/data/itp_nomass.itp' 2022-06-02T19:37:52,205 adding 'MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy' 2022-06-02T19:37:52,235 adding 'MDAnalysisTests/data/legacy_DCD_adk_coords.npy' 2022-06-02T19:37:52,241 adding 'MDAnalysisTests/data/legacy_DCD_c36_coords.npy' 2022-06-02T19:37:52,243 adding 'MDAnalysisTests/data/make_whole.gro' 2022-06-02T19:37:52,480 adding 'MDAnalysisTests/data/martini_dppc_chol_bilayer.gro' 2022-06-02T19:37:52,489 adding 'MDAnalysisTests/data/mini.xyz' 2022-06-02T19:37:52,491 adding 'MDAnalysisTests/data/missing_atomname.gro' 2022-06-02T19:37:52,494 adding 'MDAnalysisTests/data/model_then_cryst.pdb' 2022-06-02T19:37:52,497 adding 'MDAnalysisTests/data/model_then_cryst.pdb.bz2' 2022-06-02T19:37:52,501 adding 'MDAnalysisTests/data/model_then_cryst.pdb.gz' 2022-06-02T19:37:52,503 adding 'MDAnalysisTests/data/mol2_comments_header_bat.npy' 2022-06-02T19:37:52,507 adding 'MDAnalysisTests/data/molecule.sdf' 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2022-06-02T19:37:59,544 adding 'MDAnalysisTests/data/coordinates/test.xtc' 2022-06-02T19:37:59,546 adding 'MDAnalysisTests/data/coordinates/test.xyz' 2022-06-02T19:37:59,549 adding 'MDAnalysisTests/data/coordinates/test.xyz.bz2' 2022-06-02T19:37:59,551 adding 'MDAnalysisTests/data/coordinates/test_incomplete_vel.gro' 2022-06-02T19:37:59,553 adding 'MDAnalysisTests/data/coordinates/test_topology.pdb' 2022-06-02T19:37:59,570 adding 'MDAnalysisTests/data/dlpoly/CONFIG' 2022-06-02T19:37:59,573 adding 'MDAnalysisTests/data/dlpoly/CONFIG_minimal' 2022-06-02T19:37:59,575 adding 'MDAnalysisTests/data/dlpoly/CONFIG_order' 2022-06-02T19:37:59,639 adding 'MDAnalysisTests/data/dlpoly/HISTORY' 2022-06-02T19:37:59,648 adding 'MDAnalysisTests/data/dlpoly/HISTORY_classic' 2022-06-02T19:37:59,665 adding 'MDAnalysisTests/data/dlpoly/HISTORY_minimal' 2022-06-02T19:37:59,689 adding 'MDAnalysisTests/data/dlpoly/HISTORY_minimal_cell' 2022-06-02T19:37:59,704 adding 'MDAnalysisTests/data/dlpoly/HISTORY_order' 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2022-06-02T19:38:08,286 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr' 2022-06-02T19:38:08,543 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr' 2022-06-02T19:38:08,801 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr' 2022-06-02T19:38:09,059 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr' 2022-06-02T19:38:09,316 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr' 2022-06-02T19:38:09,573 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr' 2022-06-02T19:38:09,830 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr' 2022-06-02T19:38:10,087 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr' 2022-06-02T19:38:10,345 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr' 2022-06-02T19:38:10,602 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr' 2022-06-02T19:38:10,859 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr' 2022-06-02T19:38:11,117 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr' 2022-06-02T19:38:11,375 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr' 2022-06-02T19:38:11,632 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr' 2022-06-02T19:38:11,890 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr' 2022-06-02T19:38:12,685 adding 'MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr' 2022-06-02T19:38:13,509 adding 'MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr' 2022-06-02T19:38:14,228 adding 'MDAnalysisTests/data/tprs/drew_gmx_4.5.5.double.tpr' 2022-06-02T19:38:14,260 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy.gro' 2022-06-02T19:38:14,262 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy.mdp' 2022-06-02T19:38:14,265 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy.top' 2022-06-02T19:38:14,268 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr' 2022-06-02T19:38:14,270 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2018.mdp' 2022-06-02T19:38:14,273 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr' 2022-06-02T19:38:14,277 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr' 2022-06-02T19:38:14,281 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr' 2022-06-02T19:38:14,285 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr' 2022-06-02T19:38:14,288 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr' 2022-06-02T19:38:14,292 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr' 2022-06-02T19:38:14,295 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr' 2022-06-02T19:38:14,299 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr' 2022-06-02T19:38:14,301 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.top' 2022-06-02T19:38:14,307 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr' 2022-06-02T19:38:14,312 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr' 2022-06-02T19:38:14,319 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr' 2022-06-02T19:38:14,325 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr' 2022-06-02T19:38:14,330 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr' 2022-06-02T19:38:14,336 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr' 2022-06-02T19:38:14,342 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr' 2022-06-02T19:38:14,346 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr' 2022-06-02T19:38:14,349 adding 'MDAnalysisTests/data/windows/README.md' 2022-06-02T19:38:14,407 adding 'MDAnalysisTests/data/windows/WIN_HISTORY' 2022-06-02T19:38:14,465 adding 'MDAnalysisTests/data/windows/WIN_ache.mdcrd' 2022-06-02T19:38:14,721 adding 'MDAnalysisTests/data/windows/WIN_nmr_neopetrosiamide.pdb' 2022-06-02T19:38:14,739 adding 'MDAnalysisTests/data/windows/WIN_test.arc' 2022-06-02T19:38:14,742 adding 'MDAnalysisTests/data/windows/WIN_wat.lammpstrj' 2022-06-02T19:38:14,746 adding 'MDAnalysisTests/formats/__init__.py' 2022-06-02T19:38:14,751 adding 'MDAnalysisTests/formats/test_libdcd.py' 2022-06-02T19:38:14,756 adding 'MDAnalysisTests/formats/test_libmdaxdr.py' 2022-06-02T19:38:14,760 adding 'MDAnalysisTests/import/__init__.py' 2022-06-02T19:38:14,762 adding 'MDAnalysisTests/import/fork_called.py' 2022-06-02T19:38:14,765 adding 'MDAnalysisTests/import/test_import.py' 2022-06-02T19:38:14,768 adding 'MDAnalysisTests/lib/__init__.py' 2022-06-02T19:38:14,771 adding 'MDAnalysisTests/lib/test_augment.py' 2022-06-02T19:38:14,774 adding 'MDAnalysisTests/lib/test_cutil.py' 2022-06-02T19:38:14,788 adding 'MDAnalysisTests/lib/test_distances.py' 2022-06-02T19:38:14,791 adding 'MDAnalysisTests/lib/test_log.py' 2022-06-02T19:38:14,794 adding 'MDAnalysisTests/lib/test_neighborsearch.py' 2022-06-02T19:38:14,799 adding 'MDAnalysisTests/lib/test_nsgrid.py' 2022-06-02T19:38:14,802 adding 'MDAnalysisTests/lib/test_pkdtree.py' 2022-06-02T19:38:14,821 adding 'MDAnalysisTests/lib/test_util.py' 2022-06-02T19:38:14,827 adding 'MDAnalysisTests/topology/__init__.py' 2022-06-02T19:38:14,830 adding 'MDAnalysisTests/topology/base.py' 2022-06-02T19:38:14,832 adding 'MDAnalysisTests/topology/test_altloc.py' 2022-06-02T19:38:14,835 adding 'MDAnalysisTests/topology/test_crd.py' 2022-06-02T19:38:14,838 adding 'MDAnalysisTests/topology/test_dlpoly.py' 2022-06-02T19:38:14,840 adding 'MDAnalysisTests/topology/test_dms.py' 2022-06-02T19:38:14,842 adding 'MDAnalysisTests/topology/test_fhiaims.py' 2022-06-02T19:38:14,845 adding 'MDAnalysisTests/topology/test_gms.py' 2022-06-02T19:38:14,848 adding 'MDAnalysisTests/topology/test_gro.py' 2022-06-02T19:38:14,851 adding 'MDAnalysisTests/topology/test_gsd.py' 2022-06-02T19:38:14,854 adding 'MDAnalysisTests/topology/test_guessers.py' 2022-06-02T19:38:14,857 adding 'MDAnalysisTests/topology/test_hoomdxml.py' 2022-06-02T19:38:14,861 adding 'MDAnalysisTests/topology/test_itp.py' 2022-06-02T19:38:14,864 adding 'MDAnalysisTests/topology/test_lammpsdata.py' 2022-06-02T19:38:14,867 adding 'MDAnalysisTests/topology/test_minimal.py' 2022-06-02T19:38:14,878 adding 'MDAnalysisTests/topology/test_mmtf.py' 2022-06-02T19:38:14,882 adding 'MDAnalysisTests/topology/test_mol2.py' 2022-06-02T19:38:14,886 adding 'MDAnalysisTests/topology/test_pdb.py' 2022-06-02T19:38:14,889 adding 'MDAnalysisTests/topology/test_pdbqt.py' 2022-06-02T19:38:14,891 adding 'MDAnalysisTests/topology/test_pqr.py' 2022-06-02T19:38:14,895 adding 'MDAnalysisTests/topology/test_psf.py' 2022-06-02T19:38:14,900 adding 'MDAnalysisTests/topology/test_top.py' 2022-06-02T19:38:14,903 adding 'MDAnalysisTests/topology/test_topology_base.py' 2022-06-02T19:38:14,905 adding 'MDAnalysisTests/topology/test_topology_str_types.py' 2022-06-02T19:38:14,909 adding 'MDAnalysisTests/topology/test_tprparser.py' 2022-06-02T19:38:14,912 adding 'MDAnalysisTests/topology/test_txyz.py' 2022-06-02T19:38:14,915 adding 'MDAnalysisTests/topology/test_xpdb.py' 2022-06-02T19:38:14,917 adding 'MDAnalysisTests/topology/test_xyz.py' 2022-06-02T19:38:14,921 adding 'MDAnalysisTests/transformations/__init__.py' 2022-06-02T19:38:14,923 adding 'MDAnalysisTests/transformations/test_base.py' 2022-06-02T19:38:14,926 adding 'MDAnalysisTests/transformations/test_boxdimensions.py' 2022-06-02T19:38:14,929 adding 'MDAnalysisTests/transformations/test_fit.py' 2022-06-02T19:38:14,932 adding 'MDAnalysisTests/transformations/test_positionaveraging.py' 2022-06-02T19:38:14,935 adding 'MDAnalysisTests/transformations/test_rotate.py' 2022-06-02T19:38:14,939 adding 'MDAnalysisTests/transformations/test_translate.py' 2022-06-02T19:38:14,941 adding 'MDAnalysisTests/transformations/test_wrap.py' 2022-06-02T19:38:14,946 adding 'MDAnalysisTests/utils/__init__.py' 2022-06-02T19:38:14,948 adding 'MDAnalysisTests/utils/test_authors.py' 2022-06-02T19:38:14,950 adding 'MDAnalysisTests/utils/test_datafiles.py' 2022-06-02T19:38:14,953 adding 'MDAnalysisTests/utils/test_duecredit.py' 2022-06-02T19:38:14,956 adding 'MDAnalysisTests/utils/test_failure.py' 2022-06-02T19:38:14,963 adding 'MDAnalysisTests/utils/test_imports.py' 2022-06-02T19:38:14,966 adding 'MDAnalysisTests/utils/test_log.py' 2022-06-02T19:38:14,969 adding 'MDAnalysisTests/utils/test_meta.py' 2022-06-02T19:38:14,972 adding 'MDAnalysisTests/utils/test_modelling.py' 2022-06-02T19:38:14,975 adding 'MDAnalysisTests/utils/test_persistence.py' 2022-06-02T19:38:14,981 adding 'MDAnalysisTests/utils/test_pickleio.py' 2022-06-02T19:38:14,984 adding 'MDAnalysisTests/utils/test_qcprot.py' 2022-06-02T19:38:14,987 adding 'MDAnalysisTests/utils/test_selections.py' 2022-06-02T19:38:14,992 adding 'MDAnalysisTests/utils/test_streamio.py' 2022-06-02T19:38:14,999 adding 'MDAnalysisTests/utils/test_transformations.py' 2022-06-02T19:38:15,002 adding 'MDAnalysisTests/utils/test_units.py' 2022-06-02T19:38:15,006 adding 'MDAnalysisTests/visualization/__init__.py' 2022-06-02T19:38:15,009 adding 'MDAnalysisTests/visualization/test_streamlines.py' 2022-06-02T19:38:15,015 adding 'MDAnalysisTests-2.2.0.dist-info/AUTHORS' 2022-06-02T19:38:15,024 adding 'MDAnalysisTests-2.2.0.dist-info/LICENSE' 2022-06-02T19:38:15,027 adding 'MDAnalysisTests-2.2.0.dist-info/METADATA' 2022-06-02T19:38:15,029 adding 'MDAnalysisTests-2.2.0.dist-info/WHEEL' 2022-06-02T19:38:15,030 adding 'MDAnalysisTests-2.2.0.dist-info/top_level.txt' 2022-06-02T19:38:15,050 adding 'MDAnalysisTests-2.2.0.dist-info/RECORD' 2022-06-02T19:38:15,459 removing build/bdist.linux-armv7l/wheel 2022-06-02T19:38:16,009 Building wheel for mdanalysistests (setup.py): finished with status 'done' 2022-06-02T19:38:17,620 Created wheel for mdanalysistests: filename=MDAnalysisTests-2.2.0-py2.py3-none-any.whl size=52786845 sha256=8a14683bfdf84c917c2f0a101c6d176750da0b058731d37bfea92cd9b6fe78e3 2022-06-02T19:38:17,622 Stored in directory: /tmp/pip-ephem-wheel-cache-aqaqcd50/wheels/b6/db/a9/c7911eb9e36503aca5298bdda0df52bb2d7951d53d9000cd0b 2022-06-02T19:38:17,747 Successfully built mdanalysistests 2022-06-02T19:38:21,236 Removed build tracker: '/tmp/pip-build-tracker-vn_7448h'