2022-06-02T22:40:58,319 Created temporary directory: /tmp/pip-ephem-wheel-cache-039rf4zn 2022-06-02T22:40:58,325 Created temporary directory: /tmp/pip-req-tracker-51z7y8yz 2022-06-02T22:40:58,326 Initialized build tracking at /tmp/pip-req-tracker-51z7y8yz 2022-06-02T22:40:58,326 Created build tracker: /tmp/pip-req-tracker-51z7y8yz 2022-06-02T22:40:58,327 Entered build tracker: /tmp/pip-req-tracker-51z7y8yz 2022-06-02T22:40:58,328 Created temporary directory: /tmp/pip-wheel-sti_7_j4 2022-06-02T22:40:58,384 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-02T22:40:58,389 2 location(s) to search for versions of pdb-tools-removed-atom-limit: 2022-06-02T22:40:58,389 * https://pypi.org/simple/pdb-tools-removed-atom-limit/ 2022-06-02T22:40:58,389 * https://www.piwheels.org/simple/pdb-tools-removed-atom-limit/ 2022-06-02T22:40:58,390 Fetching project page and analyzing links: https://pypi.org/simple/pdb-tools-removed-atom-limit/ 2022-06-02T22:40:58,392 Getting page https://pypi.org/simple/pdb-tools-removed-atom-limit/ 2022-06-02T22:40:58,396 Found index url https://pypi.org/simple 2022-06-02T22:40:58,711 Found link https://files.pythonhosted.org/packages/3e/b3/22d3bd57d2d2c2c776366b88efa4ae77616365cae5f10a55b5d90769c72e/pdb-tools-removed-atom-limit-2.4.5.tar.gz#sha256=b2fc636008fecba31641e59fe7a535cdc8beebd5ca22d4d5b43bff72b7046c0c (from https://pypi.org/simple/pdb-tools-removed-atom-limit/), version: 2.4.5 2022-06-02T22:40:58,712 Fetching project page and analyzing links: https://www.piwheels.org/simple/pdb-tools-removed-atom-limit/ 2022-06-02T22:40:58,713 Getting page https://www.piwheels.org/simple/pdb-tools-removed-atom-limit/ 2022-06-02T22:40:58,716 Found index url https://www.piwheels.org/simple 2022-06-02T22:40:58,962 Given no hashes to check 1 links for project 'pdb-tools-removed-atom-limit': discarding no candidates 2022-06-02T22:40:58,994 Collecting pdb-tools-removed-atom-limit==2.4.5 2022-06-02T22:40:58,998 Created temporary directory: /tmp/pip-unpack-n437wayh 2022-06-02T22:40:59,254 Downloading pdb-tools-removed-atom-limit-2.4.5.tar.gz (42 kB) 2022-06-02T22:40:59,646 Added pdb-tools-removed-atom-limit==2.4.5 from https://files.pythonhosted.org/packages/3e/b3/22d3bd57d2d2c2c776366b88efa4ae77616365cae5f10a55b5d90769c72e/pdb-tools-removed-atom-limit-2.4.5.tar.gz#sha256=b2fc636008fecba31641e59fe7a535cdc8beebd5ca22d4d5b43bff72b7046c0c to build tracker '/tmp/pip-req-tracker-51z7y8yz' 2022-06-02T22:40:59,649 Running setup.py (path:/tmp/pip-wheel-sti_7_j4/pdb-tools-removed-atom-limit_a6ab526bacc344a19e1d79b5d2619416/setup.py) egg_info for package pdb-tools-removed-atom-limit 2022-06-02T22:40:59,650 Created temporary directory: /tmp/pip-pip-egg-info-li4z898_ 2022-06-02T22:40:59,651 Running command python setup.py egg_info 2022-06-02T22:41:02,182 running egg_info 2022-06-02T22:41:02,189 creating /tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info 2022-06-02T22:41:02,194 writing /tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/PKG-INFO 2022-06-02T22:41:02,200 writing dependency_links to /tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/dependency_links.txt 2022-06-02T22:41:02,202 writing top-level names to /tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/top_level.txt 2022-06-02T22:41:02,209 writing entry points to /tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/entry_points.txt 2022-06-02T22:41:02,215 writing manifest file '/tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/SOURCES.txt' 2022-06-02T22:41:02,642 reading manifest file '/tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/SOURCES.txt' 2022-06-02T22:41:02,659 writing manifest file '/tmp/pip-pip-egg-info-li4z898_/pdb_tools_removed_atom_limit.egg-info/SOURCES.txt' 2022-06-02T22:41:02,804 Source in /tmp/pip-wheel-sti_7_j4/pdb-tools-removed-atom-limit_a6ab526bacc344a19e1d79b5d2619416 has version 2.4.5, which satisfies requirement pdb-tools-removed-atom-limit==2.4.5 from https://files.pythonhosted.org/packages/3e/b3/22d3bd57d2d2c2c776366b88efa4ae77616365cae5f10a55b5d90769c72e/pdb-tools-removed-atom-limit-2.4.5.tar.gz#sha256=b2fc636008fecba31641e59fe7a535cdc8beebd5ca22d4d5b43bff72b7046c0c 2022-06-02T22:41:02,806 Removed pdb-tools-removed-atom-limit==2.4.5 from https://files.pythonhosted.org/packages/3e/b3/22d3bd57d2d2c2c776366b88efa4ae77616365cae5f10a55b5d90769c72e/pdb-tools-removed-atom-limit-2.4.5.tar.gz#sha256=b2fc636008fecba31641e59fe7a535cdc8beebd5ca22d4d5b43bff72b7046c0c from build tracker '/tmp/pip-req-tracker-51z7y8yz' 2022-06-02T22:41:02,817 Created temporary directory: /tmp/pip-unpack-yq45gm5q 2022-06-02T22:41:02,819 Building wheels for collected packages: pdb-tools-removed-atom-limit 2022-06-02T22:41:02,827 Created temporary directory: /tmp/pip-wheel-wvuz849u 2022-06-02T22:41:02,829 Building wheel for pdb-tools-removed-atom-limit (setup.py): started 2022-06-02T22:41:02,829 Destination directory: /tmp/pip-wheel-wvuz849u 2022-06-02T22:41:02,830 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-sti_7_j4/pdb-tools-removed-atom-limit_a6ab526bacc344a19e1d79b5d2619416/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-sti_7_j4/pdb-tools-removed-atom-limit_a6ab526bacc344a19e1d79b5d2619416/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wvuz849u 2022-06-02T22:41:05,306 running bdist_wheel 2022-06-02T22:41:05,323 running build 2022-06-02T22:41:05,324 running build_py 2022-06-02T22:41:05,660 creating build 2022-06-02T22:41:05,661 creating build/lib 2022-06-02T22:41:05,663 creating build/lib/pdbtools 2022-06-02T22:41:05,666 copying pdbtools/pdb_fetch.py -> build/lib/pdbtools 2022-06-02T22:41:05,671 copying pdbtools/pdb_splitmodel.py -> build/lib/pdbtools 2022-06-02T22:41:05,676 copying pdbtools/pdb_mkensemble.py -> build/lib/pdbtools 2022-06-02T22:41:05,682 copying pdbtools/pdb_chkensemble.py -> build/lib/pdbtools 2022-06-02T22:41:05,688 copying pdbtools/pdb_reres.py -> build/lib/pdbtools 2022-06-02T22:41:05,695 copying pdbtools/pdb_keepcoord.py -> build/lib/pdbtools 2022-06-02T22:41:05,701 copying pdbtools/pdb_validate.py -> build/lib/pdbtools 2022-06-02T22:41:05,708 copying pdbtools/pdb_merge.py -> build/lib/pdbtools 2022-06-02T22:41:05,713 copying pdbtools/pdb_delelem.py -> build/lib/pdbtools 2022-06-02T22:41:05,720 copying pdbtools/pdb_element.py -> build/lib/pdbtools 2022-06-02T22:41:05,726 copying pdbtools/__init__.py -> build/lib/pdbtools 2022-06-02T22:41:05,732 copying pdbtools/pdb_selatom.py -> build/lib/pdbtools 2022-06-02T22:41:05,739 copying pdbtools/pdb_delinsertion.py -> build/lib/pdbtools 2022-06-02T22:41:05,744 copying pdbtools/pdb_chain.py -> build/lib/pdbtools 2022-06-02T22:41:05,751 copying pdbtools/pdb_delresname.py -> build/lib/pdbtools 2022-06-02T22:41:05,757 copying pdbtools/pdb_selelem.py -> build/lib/pdbtools 2022-06-02T22:41:05,764 copying pdbtools/pdb_reatom.py -> build/lib/pdbtools 2022-06-02T22:41:05,771 copying pdbtools/pdb_b.py -> build/lib/pdbtools 2022-06-02T22:41:05,778 copying pdbtools/pdb_tocif.py -> build/lib/pdbtools 2022-06-02T22:41:05,785 copying pdbtools/pdb_seg.py -> build/lib/pdbtools 2022-06-02T22:41:05,792 copying pdbtools/pdb_gap.py -> build/lib/pdbtools 2022-06-02T22:41:05,799 copying pdbtools/pdb_sort.py -> build/lib/pdbtools 2022-06-02T22:41:05,805 copying pdbtools/pdb_splitchain.py -> build/lib/pdbtools 2022-06-02T22:41:05,811 copying pdbtools/pdb_intersect.py -> build/lib/pdbtools 2022-06-02T22:41:05,817 copying pdbtools/pdb_splitseg.py -> build/lib/pdbtools 2022-06-02T22:41:05,823 copying pdbtools/pdb_selhetatm.py -> build/lib/pdbtools 2022-06-02T22:41:05,829 copying pdbtools/pdb_selaltloc.py -> build/lib/pdbtools 2022-06-02T22:41:05,836 copying pdbtools/pdb_segxchain.py -> build/lib/pdbtools 2022-06-02T22:41:05,843 copying pdbtools/pdb_tidy.py -> build/lib/pdbtools 2022-06-02T22:41:05,850 copying pdbtools/pdb_chainxseg.py -> build/lib/pdbtools 2022-06-02T22:41:05,856 copying pdbtools/pdb_uniqname.py -> build/lib/pdbtools 2022-06-02T22:41:05,862 copying pdbtools/pdb_delres.py -> build/lib/pdbtools 2022-06-02T22:41:05,869 copying pdbtools/pdb_delchain.py -> build/lib/pdbtools 2022-06-02T22:41:05,875 copying pdbtools/pdb_rplresname.py -> build/lib/pdbtools 2022-06-02T22:41:05,882 copying pdbtools/pdb_selres.py -> build/lib/pdbtools 2022-06-02T22:41:05,888 copying pdbtools/pdb_selchain.py -> build/lib/pdbtools 2022-06-02T22:41:05,895 copying pdbtools/pdb_wc.py -> build/lib/pdbtools 2022-06-02T22:41:05,902 copying pdbtools/pdb_fixinsert.py -> build/lib/pdbtools 2022-06-02T22:41:05,909 copying pdbtools/pdb_shiftres.py -> build/lib/pdbtools 2022-06-02T22:41:05,916 copying pdbtools/pdb_selresname.py -> build/lib/pdbtools 2022-06-02T22:41:05,922 copying pdbtools/pdb_rplchain.py -> build/lib/pdbtools 2022-06-02T22:41:05,929 copying pdbtools/pdb_tofasta.py -> build/lib/pdbtools 2022-06-02T22:41:05,936 copying pdbtools/pdb_head.py -> build/lib/pdbtools 2022-06-02T22:41:05,942 copying pdbtools/pdb_occ.py -> build/lib/pdbtools 2022-06-02T22:41:05,949 copying pdbtools/pdb_delhetatm.py -> build/lib/pdbtools 2022-06-02T22:41:05,954 copying pdbtools/pdb_fromcif.py -> build/lib/pdbtools 2022-06-02T22:41:05,961 copying pdbtools/pdb_chainbows.py -> build/lib/pdbtools 2022-06-02T22:41:05,968 copying pdbtools/pdb_selseg.py -> build/lib/pdbtools 2022-06-02T22:41:05,996 installing to build/bdist.linux-armv7l/wheel 2022-06-02T22:41:05,997 running install 2022-06-02T22:41:05,999 running install_lib 2022-06-02T22:41:06,007 creating build/bdist.linux-armv7l 2022-06-02T22:41:06,008 creating build/bdist.linux-armv7l/wheel 2022-06-02T22:41:06,014 creating build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,016 copying build/lib/pdbtools/pdb_fetch.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,021 copying build/lib/pdbtools/pdb_splitmodel.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,025 copying build/lib/pdbtools/pdb_mkensemble.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,031 copying build/lib/pdbtools/pdb_chkensemble.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,037 copying build/lib/pdbtools/pdb_reres.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,044 copying build/lib/pdbtools/pdb_keepcoord.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,049 copying build/lib/pdbtools/pdb_validate.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,055 copying build/lib/pdbtools/pdb_merge.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,061 copying build/lib/pdbtools/pdb_delelem.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,067 copying build/lib/pdbtools/pdb_element.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,074 copying build/lib/pdbtools/__init__.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,079 copying build/lib/pdbtools/pdb_selatom.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,086 copying build/lib/pdbtools/pdb_delinsertion.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,091 copying build/lib/pdbtools/pdb_chain.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,097 copying build/lib/pdbtools/pdb_delresname.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,103 copying build/lib/pdbtools/pdb_selelem.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,110 copying build/lib/pdbtools/pdb_reatom.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,116 copying build/lib/pdbtools/pdb_b.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,122 copying build/lib/pdbtools/pdb_tocif.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,129 copying build/lib/pdbtools/pdb_seg.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,135 copying build/lib/pdbtools/pdb_gap.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,141 copying build/lib/pdbtools/pdb_sort.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,148 copying build/lib/pdbtools/pdb_splitchain.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,154 copying build/lib/pdbtools/pdb_intersect.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,159 copying build/lib/pdbtools/pdb_splitseg.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,165 copying build/lib/pdbtools/pdb_selhetatm.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,171 copying build/lib/pdbtools/pdb_selaltloc.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,178 copying build/lib/pdbtools/pdb_segxchain.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,185 copying build/lib/pdbtools/pdb_tidy.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,192 copying build/lib/pdbtools/pdb_chainxseg.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,197 copying build/lib/pdbtools/pdb_uniqname.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,203 copying build/lib/pdbtools/pdb_delres.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,209 copying build/lib/pdbtools/pdb_delchain.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,215 copying build/lib/pdbtools/pdb_rplresname.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,222 copying build/lib/pdbtools/pdb_selres.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,228 copying build/lib/pdbtools/pdb_selchain.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,234 copying build/lib/pdbtools/pdb_wc.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,241 copying build/lib/pdbtools/pdb_fixinsert.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,248 copying build/lib/pdbtools/pdb_shiftres.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,254 copying build/lib/pdbtools/pdb_selresname.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,260 copying build/lib/pdbtools/pdb_rplchain.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,267 copying build/lib/pdbtools/pdb_tofasta.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,273 copying build/lib/pdbtools/pdb_head.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,279 copying build/lib/pdbtools/pdb_occ.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,286 copying build/lib/pdbtools/pdb_delhetatm.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,291 copying build/lib/pdbtools/pdb_fromcif.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,298 copying build/lib/pdbtools/pdb_chainbows.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,304 copying build/lib/pdbtools/pdb_selseg.py -> build/bdist.linux-armv7l/wheel/pdbtools 2022-06-02T22:41:06,310 running install_egg_info 2022-06-02T22:41:06,368 running egg_info 2022-06-02T22:41:06,371 writing top-level names to pdb_tools_removed_atom_limit.egg-info/top_level.txt 2022-06-02T22:41:06,373 writing pdb_tools_removed_atom_limit.egg-info/PKG-INFO 2022-06-02T22:41:06,382 writing entry points to pdb_tools_removed_atom_limit.egg-info/entry_points.txt 2022-06-02T22:41:06,385 writing dependency_links to pdb_tools_removed_atom_limit.egg-info/dependency_links.txt 2022-06-02T22:41:06,430 reading manifest file 'pdb_tools_removed_atom_limit.egg-info/SOURCES.txt' 2022-06-02T22:41:06,456 writing manifest file 'pdb_tools_removed_atom_limit.egg-info/SOURCES.txt' 2022-06-02T22:41:06,460 Copying pdb_tools_removed_atom_limit.egg-info to build/bdist.linux-armv7l/wheel/pdb_tools_removed_atom_limit-2.4.5-py3.5.egg-info 2022-06-02T22:41:06,486 running install_scripts 2022-06-02T22:41:06,683 creating build/bdist.linux-armv7l/wheel/pdb_tools_removed_atom_limit-2.4.5.dist-info/WHEEL 2022-06-02T22:41:07,108 Building wheel for pdb-tools-removed-atom-limit (setup.py): finished with status 'done' 2022-06-02T22:41:07,114 Created wheel for pdb-tools-removed-atom-limit: filename=pdb_tools_removed_atom_limit-2.4.5-py3-none-any.whl size=118473 sha256=a6e5b69977f2c490e19019f402d06a650dfcf739ae25b4c45e99d9aaea95d8d3 2022-06-02T22:41:07,115 Stored in directory: /tmp/pip-ephem-wheel-cache-039rf4zn/wheels/5d/6e/25/e499f3f2b2036d9d8dd53590780050d605c683beeb9bc74727 2022-06-02T22:41:07,148 Successfully built pdb-tools-removed-atom-limit 2022-06-02T22:41:07,172 Removed build tracker: '/tmp/pip-req-tracker-51z7y8yz'