2022-06-04T15:16:35,853 Created temporary directory: /tmp/pip-ephem-wheel-cache-af_2hixe 2022-06-04T15:16:35,858 Created temporary directory: /tmp/pip-build-tracker-elkd64cq 2022-06-04T15:16:35,859 Initialized build tracking at /tmp/pip-build-tracker-elkd64cq 2022-06-04T15:16:35,859 Created build tracker: /tmp/pip-build-tracker-elkd64cq 2022-06-04T15:16:35,860 Entered build tracker: /tmp/pip-build-tracker-elkd64cq 2022-06-04T15:16:35,861 Created temporary directory: /tmp/pip-wheel-wq_zabcz 2022-06-04T15:16:35,930 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-04T15:16:35,939 2 location(s) to search for versions of e3fp: 2022-06-04T15:16:35,939 * https://pypi.org/simple/e3fp/ 2022-06-04T15:16:35,939 * https://www.piwheels.org/simple/e3fp/ 2022-06-04T15:16:35,940 Fetching project page and analyzing links: https://pypi.org/simple/e3fp/ 2022-06-04T15:16:35,941 Getting page https://pypi.org/simple/e3fp/ 2022-06-04T15:16:35,945 Found index url https://pypi.org/simple 2022-06-04T15:16:36,060 Found link https://files.pythonhosted.org/packages/dd/bf/b2d4f832fdfde9f72aef372ad753ce79dcdc7657b99bd74510afff3bc615/e3fp-1.0.tar.gz#sha256=ac306a9b160afdb346ed9ad893f03a55ce810b6f689d2e51bfafcced955bd66d (from https://pypi.org/simple/e3fp/), version: 1.0 2022-06-04T15:16:36,061 Found link https://files.pythonhosted.org/packages/b7/98/6aa089cec611de8547fe19457a2bb077a4664f35979c4288d69e4d92bb20/e3fp-1.1.tar.gz#sha256=b7c636b854d12eef37f51898379978d80a99c727fb9975e8e6474f8f8c9d60f9 (from https://pypi.org/simple/e3fp/), version: 1.1 2022-06-04T15:16:36,062 Skipping link: No binaries permitted for e3fp: https://files.pythonhosted.org/packages/8b/c9/e7f2965d7fb610576bd32cf6f8fb144000bb55c780f84a6d987367fc2fc4/e3fp-1.2.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=6787108f1776b2360880ce46dce72298803f10eab3deba5dbc854fc0ce212a61 (from https://pypi.org/simple/e3fp/) 2022-06-04T15:16:36,062 Found link https://files.pythonhosted.org/packages/57/5d/6f0199e06d4051ea84e95e8a8413ae5e3f965d0252e63ecc1f3e19aabdae/e3fp-1.2.0.tar.gz#sha256=a851c149db252d3035061174c9084c2c68de237906c2964c0c175b5b01aa9b1c (from https://pypi.org/simple/e3fp/), version: 1.2.0 2022-06-04T15:16:36,063 Skipping link: No binaries permitted for e3fp: https://files.pythonhosted.org/packages/4a/26/9748b546eab3281971598063b7fd2007a1a6b083dc99d1cd517c6e26b13a/e3fp-1.2.1-cp38-cp38-macosx_10_14_x86_64.whl#sha256=afc5a22cfb010fe49932c88885921ba4fe6abdd0a550495e7543c4dd1c71acfe (from https://pypi.org/simple/e3fp/) 2022-06-04T15:16:36,064 Found link https://files.pythonhosted.org/packages/59/bf/f1e3683fcd49448eaa02fc889b606a111ae85c537f275d634f2d0b3520e6/e3fp-1.2.1.tar.gz#sha256=f079b78c6575d812424972d16ba9b824eef0733d839a14585257e38496bc133f (from https://pypi.org/simple/e3fp/), version: 1.2.1 2022-06-04T15:16:36,064 Skipping link: No binaries permitted for e3fp: https://files.pythonhosted.org/packages/ef/e1/adfc6d95765004834529890fcadcb71556bd43f1fb214fadd5258cfabc70/e3fp-1.2.2-py3-none-any.whl#sha256=1647927bb7d24526311062b613d2c06182fd6442fc0464e715e6fb8ca8250c44 (from https://pypi.org/simple/e3fp/) 2022-06-04T15:16:36,065 Found link https://files.pythonhosted.org/packages/63/a1/8d8fe633c227a5af3f83be530db40bc06a9aa8d30a9255098cf75896d436/e3fp-1.2.2.tar.gz#sha256=1672eb59a95f502796f4ac85be8346898202fb78138afc0b44d6adb18bea83d0 (from https://pypi.org/simple/e3fp/), version: 1.2.2 2022-06-04T15:16:36,066 Skipping link: No binaries permitted for e3fp: https://files.pythonhosted.org/packages/8b/65/9561e654bc576780d686b2803e3c31ffc4b9e0d9f0ce06911c81e6c414a5/e3fp-1.2.3-py3-none-any.whl#sha256=1fd27617391c265e916c0b59ac40a3c8c5c4fdb3193793eccf8f3e6ff1089770 (from https://pypi.org/simple/e3fp/) 2022-06-04T15:16:36,066 Found link https://files.pythonhosted.org/packages/e2/ec/47021e1b91371275021fb72398860d6cbca7749a55b693df9a394f0c9108/e3fp-1.2.3.tar.gz#sha256=c7fd01869f0d23cb1950ebb23b36173f1566614a83205b497a6875c04cf5d9e1 (from https://pypi.org/simple/e3fp/), version: 1.2.3 2022-06-04T15:16:36,067 Skipping link: No binaries permitted for e3fp: https://files.pythonhosted.org/packages/d6/20/731fecd1643c379de462c15d48a0312f093ff7a4e380bf96277c75786536/e3fp-1.2.4-py3-none-any.whl#sha256=4f30d2acaee1ebd9f0605df346819be0ea71a9ef0528e00d544f21083c2c21ac (from https://pypi.org/simple/e3fp/) 2022-06-04T15:16:36,067 Found link https://files.pythonhosted.org/packages/bc/1f/6c2f1944bf17e7c5803f56dcb111f26d4845d27f62494389286f9ac4e735/e3fp-1.2.4.tar.gz#sha256=8d5aa5e338665441a58d51d9f679da481e7f7ed48f4df1ed03fb759ccb4d9326 (from https://pypi.org/simple/e3fp/), version: 1.2.4 2022-06-04T15:16:36,068 Fetching project page and analyzing links: https://www.piwheels.org/simple/e3fp/ 2022-06-04T15:16:36,069 Getting page https://www.piwheels.org/simple/e3fp/ 2022-06-04T15:16:36,071 Found index url https://www.piwheels.org/simple 2022-06-04T15:16:36,297 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.3-py3-none-any.whl#sha256=1fd27617391c265e916c0b59ac40a3c8c5c4fdb3193793eccf8f3e6ff1089770 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,298 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.2-py3-none-any.whl#sha256=1647927bb7d24526311062b613d2c06182fd6442fc0464e715e6fb8ca8250c44 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,298 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=34410860b86721ccf4d3f291663d269dd330c0374e620ec4c5d0652c8db4966f (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,299 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=34410860b86721ccf4d3f291663d269dd330c0374e620ec4c5d0652c8db4966f (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,299 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=50081d92769ab5b9df89ed7f04460be8686163cca8a024386829f48e797646c3 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,300 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=50081d92769ab5b9df89ed7f04460be8686163cca8a024386829f48e797646c3 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,300 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=7a322c32075d352ce16d062bb352ab88d35101874982182ceefdebffc3c44b3b (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,301 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=7a322c32075d352ce16d062bb352ab88d35101874982182ceefdebffc3c44b3b (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,301 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=488d17e1ec35a1bc49c00c8697c206d3d203e4bab1fef6f07afbae9c57fab8e9 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,302 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=488d17e1ec35a1bc49c00c8697c206d3d203e4bab1fef6f07afbae9c57fab8e9 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,302 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=0f93a59b8b477da1ccb69d155b01a04d7589b810809995b3df827107cf11a012 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,303 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=0f93a59b8b477da1ccb69d155b01a04d7589b810809995b3df827107cf11a012 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,304 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.1-cp35-cp35m-linux_armv6l.whl#sha256=59a22d977591885ab23129acc74031650dfe96fdccb8afbaba445515bf111483 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,304 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.1-cp35-cp35m-linux_armv7l.whl#sha256=59a22d977591885ab23129acc74031650dfe96fdccb8afbaba445515bf111483 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,305 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.1-cp34-cp34m-linux_armv6l.whl#sha256=20a0ba4d05c5cd50d26a74013a36b9ebccb62c7900c039d73567ef9ed55b148d (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,305 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.1-cp34-cp34m-linux_armv7l.whl#sha256=20a0ba4d05c5cd50d26a74013a36b9ebccb62c7900c039d73567ef9ed55b148d (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,306 Skipping link: No binaries permitted for e3fp: https://www.piwheels.org/simple/e3fp/e3fp-1.0-py3-none-any.whl#sha256=17a43b6863ba616d4e414b941b33b219bf880cdbc8f78bd2b656d396439a0286 (from https://www.piwheels.org/simple/e3fp/) 2022-06-04T15:16:36,306 Skipping link: not a file: https://www.piwheels.org/simple/e3fp/ 2022-06-04T15:16:36,307 Skipping link: not a file: https://pypi.org/simple/e3fp/ 2022-06-04T15:16:36,343 Given no hashes to check 1 links for project 'e3fp': discarding no candidates 2022-06-04T15:16:36,374 Collecting e3fp==1.2.4 2022-06-04T15:16:36,378 Created temporary directory: /tmp/pip-unpack-hjfc7blq 2022-06-04T15:16:36,471 Downloading e3fp-1.2.4.tar.gz (705 kB) 2022-06-04T15:16:36,986 Added e3fp==1.2.4 from https://files.pythonhosted.org/packages/bc/1f/6c2f1944bf17e7c5803f56dcb111f26d4845d27f62494389286f9ac4e735/e3fp-1.2.4.tar.gz#sha256=8d5aa5e338665441a58d51d9f679da481e7f7ed48f4df1ed03fb759ccb4d9326 to build tracker '/tmp/pip-build-tracker-elkd64cq' 2022-06-04T15:16:36,994 Created temporary directory: /tmp/pip-build-env-3emh0vz0 2022-06-04T15:16:37,008 Created temporary directory: /tmp/pip-standalone-pip-qewy95d7 2022-06-04T15:16:39,320 Installing build dependencies: started 2022-06-04T15:16:39,322 Running command pip subprocess to install build dependencies 2022-06-04T15:16:51,353 Using pip 22.1.2 from /tmp/pip-standalone-pip-qewy95d7/__env_pip__.zip/pip (python 3.7) 2022-06-04T15:16:52,695 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-04T15:16:56,844 Collecting setuptools 2022-06-04T15:16:57,113 Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.3.2-py3-none-any.whl (1.2 MB) 2022-06-04T15:16:57,774 Collecting wheel 2022-06-04T15:16:57,807 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-06-04T15:17:02,551 Installing collected packages: wheel, setuptools 2022-06-04T15:17:02,831 Creating /tmp/pip-build-env-3emh0vz0/overlay/bin 2022-06-04T15:17:02,836 changing mode of /tmp/pip-build-env-3emh0vz0/overlay/bin/wheel to 755 2022-06-04T15:17:07,914 Successfully installed setuptools-62.3.2 wheel-0.37.1 2022-06-04T15:17:08,548 Installing build dependencies: finished with status 'done' 2022-06-04T15:17:09,964 Getting requirements to build wheel: started 2022-06-04T15:17:09,966 Running command Getting requirements to build wheel 2022-06-04T15:17:16,906 running egg_info 2022-06-04T15:17:17,530 writing e3fp.egg-info/PKG-INFO 2022-06-04T15:17:18,120 writing dependency_links to e3fp.egg-info/dependency_links.txt 2022-06-04T15:17:21,065 writing requirements to e3fp.egg-info/requires.txt 2022-06-04T15:17:21,659 writing top-level names to e3fp.egg-info/top_level.txt 2022-06-04T15:17:22,381 reading manifest file 'e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:22,392 reading manifest template 'MANIFEST.in' 2022-06-04T15:17:22,451 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-06-04T15:17:22,452 % (opt, underscore_opt) 2022-06-04T15:17:22,452 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-06-04T15:17:22,454 warning: no previously-included files matching '*.py[co]' found under directory '*' 2022-06-04T15:17:22,455 adding license file 'LICENSE.txt' 2022-06-04T15:17:22,465 writing manifest file 'e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:22,688 Getting requirements to build wheel: finished with status 'done' 2022-06-04T15:17:22,707 Created temporary directory: /tmp/pip-modern-metadata-vcwwame2 2022-06-04T15:17:22,713 Preparing metadata (pyproject.toml): started 2022-06-04T15:17:22,715 Running command Preparing metadata (pyproject.toml) 2022-06-04T15:17:29,693 running dist_info 2022-06-04T15:17:30,358 creating /tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info 2022-06-04T15:17:30,997 writing /tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/PKG-INFO 2022-06-04T15:17:31,784 writing dependency_links to /tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/dependency_links.txt 2022-06-04T15:17:34,791 writing requirements to /tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/requires.txt 2022-06-04T15:17:35,395 writing top-level names to /tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/top_level.txt 2022-06-04T15:17:35,397 writing manifest file '/tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:36,132 reading manifest file '/tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:36,136 reading manifest template 'MANIFEST.in' 2022-06-04T15:17:36,189 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-06-04T15:17:36,189 % (opt, underscore_opt) 2022-06-04T15:17:36,190 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-06-04T15:17:36,191 warning: no previously-included files matching '*.py[co]' found under directory '*' 2022-06-04T15:17:36,191 adding license file 'LICENSE.txt' 2022-06-04T15:17:36,198 writing manifest file '/tmp/pip-modern-metadata-vcwwame2/e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:36,200 creating '/tmp/pip-modern-metadata-vcwwame2/e3fp-1.2.4.dist-info' 2022-06-04T15:17:36,425 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2022-06-04T15:17:36,662 Preparing metadata (pyproject.toml): finished with status 'done' 2022-06-04T15:17:36,677 Source in /tmp/pip-wheel-wq_zabcz/e3fp_635bdbb3505c47a7b7677945298f41f3 has version 1.2.4, which satisfies requirement e3fp==1.2.4 from https://files.pythonhosted.org/packages/bc/1f/6c2f1944bf17e7c5803f56dcb111f26d4845d27f62494389286f9ac4e735/e3fp-1.2.4.tar.gz#sha256=8d5aa5e338665441a58d51d9f679da481e7f7ed48f4df1ed03fb759ccb4d9326 2022-06-04T15:17:36,679 Removed e3fp==1.2.4 from https://files.pythonhosted.org/packages/bc/1f/6c2f1944bf17e7c5803f56dcb111f26d4845d27f62494389286f9ac4e735/e3fp-1.2.4.tar.gz#sha256=8d5aa5e338665441a58d51d9f679da481e7f7ed48f4df1ed03fb759ccb4d9326 from build tracker '/tmp/pip-build-tracker-elkd64cq' 2022-06-04T15:17:36,689 Created temporary directory: /tmp/pip-unpack-cb5ggrzt 2022-06-04T15:17:36,690 Building wheels for collected packages: e3fp 2022-06-04T15:17:36,699 Created temporary directory: /tmp/pip-wheel-zn23wfh_ 2022-06-04T15:17:36,700 Destination directory: /tmp/pip-wheel-zn23wfh_ 2022-06-04T15:17:36,707 Building wheel for e3fp (pyproject.toml): started 2022-06-04T15:17:36,709 Running command Building wheel for e3fp (pyproject.toml) 2022-06-04T15:17:43,103 running bdist_wheel 2022-06-04T15:17:44,332 running build 2022-06-04T15:17:44,333 running build_py 2022-06-04T15:17:44,966 creating build 2022-06-04T15:17:44,967 creating build/lib 2022-06-04T15:17:44,968 creating build/lib/e3fp 2022-06-04T15:17:44,970 copying e3fp/__init__.py -> build/lib/e3fp 2022-06-04T15:17:44,973 copying e3fp/pipeline.py -> build/lib/e3fp 2022-06-04T15:17:44,977 copying e3fp/util.py -> build/lib/e3fp 2022-06-04T15:17:44,981 creating build/lib/e3fp/config 2022-06-04T15:17:44,983 copying e3fp/config/__init__.py -> build/lib/e3fp/config 2022-06-04T15:17:44,986 copying e3fp/config/params.py -> build/lib/e3fp/config 2022-06-04T15:17:44,991 creating build/lib/e3fp/conformer 2022-06-04T15:17:44,992 copying e3fp/conformer/protonation.py -> build/lib/e3fp/conformer 2022-06-04T15:17:44,997 copying e3fp/conformer/__init__.py -> build/lib/e3fp/conformer 2022-06-04T15:17:44,999 copying e3fp/conformer/generate.py -> build/lib/e3fp/conformer 2022-06-04T15:17:45,004 copying e3fp/conformer/generator.py -> build/lib/e3fp/conformer 2022-06-04T15:17:45,008 copying e3fp/conformer/util.py -> build/lib/e3fp/conformer 2022-06-04T15:17:45,014 creating build/lib/e3fp/fingerprint 2022-06-04T15:17:45,016 copying e3fp/fingerprint/db.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,021 copying e3fp/fingerprint/__init__.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,023 copying e3fp/fingerprint/fprinter.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,029 copying e3fp/fingerprint/array_ops.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,033 copying e3fp/fingerprint/fprint.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,039 copying e3fp/fingerprint/structs.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,043 copying e3fp/fingerprint/generate.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,047 copying e3fp/fingerprint/util.py -> build/lib/e3fp/fingerprint 2022-06-04T15:17:45,052 creating build/lib/e3fp/test 2022-06-04T15:17:45,054 copying e3fp/test/test_metrics.py -> build/lib/e3fp/test 2022-06-04T15:17:45,058 copying e3fp/test/__init__.py -> build/lib/e3fp/test 2022-06-04T15:17:45,060 copying e3fp/test/test_util.py -> build/lib/e3fp/test 2022-06-04T15:17:45,063 copying e3fp/test/test_fprint_db.py -> build/lib/e3fp/test 2022-06-04T15:17:45,067 copying e3fp/test/test_dependencies.py -> build/lib/e3fp/test 2022-06-04T15:17:45,071 copying e3fp/test/test_config.py -> build/lib/e3fp/test 2022-06-04T15:17:45,073 copying e3fp/test/test_struct.py -> build/lib/e3fp/test 2022-06-04T15:17:45,077 copying e3fp/test/test_fingerprinting.py -> build/lib/e3fp/test 2022-06-04T15:17:45,082 copying e3fp/test/test_fingerprint.py -> build/lib/e3fp/test 2022-06-04T15:17:45,085 copying e3fp/test/test_conformer.py -> build/lib/e3fp/test 2022-06-04T15:17:45,088 running egg_info 2022-06-04T15:17:46,420 writing e3fp.egg-info/PKG-INFO 2022-06-04T15:17:47,016 writing dependency_links to e3fp.egg-info/dependency_links.txt 2022-06-04T15:17:49,986 writing requirements to e3fp.egg-info/requires.txt 2022-06-04T15:17:50,580 writing top-level names to e3fp.egg-info/top_level.txt 2022-06-04T15:17:50,629 reading manifest file 'e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:50,638 reading manifest template 'MANIFEST.in' 2022-06-04T15:17:50,697 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-06-04T15:17:50,698 % (opt, underscore_opt) 2022-06-04T15:17:50,698 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-06-04T15:17:50,699 warning: no previously-included files matching '*.py[co]' found under directory '*' 2022-06-04T15:17:50,700 adding license file 'LICENSE.txt' 2022-06-04T15:17:50,708 writing manifest file 'e3fp.egg-info/SOURCES.txt' 2022-06-04T15:17:50,721 copying e3fp/config/defaults.cfg -> build/lib/e3fp/config 2022-06-04T15:17:50,725 creating build/lib/e3fp/fingerprint/metrics 2022-06-04T15:17:50,726 copying e3fp/fingerprint/metrics/__init__.py -> build/lib/e3fp/fingerprint/metrics 2022-06-04T15:17:50,732 copying e3fp/fingerprint/metrics/array_metrics.py -> build/lib/e3fp/fingerprint/metrics 2022-06-04T15:17:50,737 copying e3fp/fingerprint/metrics/fprint_metrics.py -> build/lib/e3fp/fingerprint/metrics 2022-06-04T15:17:50,742 creating build/lib/e3fp/test/data 2022-06-04T15:17:50,743 copying e3fp/test/data/caffeine_planar.sdf.bz2 -> build/lib/e3fp/test/data 2022-06-04T15:17:50,747 copying e3fp/test/data/ritalin_nonplanar.sdf -> build/lib/e3fp/test/data 2022-06-04T15:17:50,751 copying e3fp/test/data/ritalin_nonplanar.sdf.bz2 -> build/lib/e3fp/test/data 2022-06-04T15:17:50,756 copying e3fp/test/data/stereo1.sdf.bz2 -> build/lib/e3fp/test/data 2022-06-04T15:17:50,760 copying e3fp/test/data/stereo2.sdf.bz2 -> build/lib/e3fp/test/data 2022-06-04T15:17:50,764 creating build/lib/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:50,766 copying e3fp/test/data/rand_sdf_files/CHEMBL116226.sdf.bz2 -> build/lib/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:50,776 copying e3fp/test/data/rand_sdf_files/CHEMBL197946.sdf.bz2 -> build/lib/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:50,790 copying e3fp/test/data/rand_sdf_files/CHEMBL2114064.sdf.bz2 -> build/lib/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:50,796 copying e3fp/test/data/rand_sdf_files/CHEMBL282186.sdf.bz2 -> build/lib/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:50,811 copying e3fp/test/data/rand_sdf_files/CHEMBL501745.sdf.bz2 -> build/lib/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,090 installing to build/bdist.linux-armv7l/wheel 2022-06-04T15:17:52,090 running install 2022-06-04T15:17:52,152 running install_lib 2022-06-04T15:17:52,783 creating build/bdist.linux-armv7l 2022-06-04T15:17:52,784 creating build/bdist.linux-armv7l/wheel 2022-06-04T15:17:52,787 creating build/bdist.linux-armv7l/wheel/e3fp 2022-06-04T15:17:52,789 copying build/lib/e3fp/__init__.py -> build/bdist.linux-armv7l/wheel/e3fp 2022-06-04T15:17:52,793 copying build/lib/e3fp/pipeline.py -> build/bdist.linux-armv7l/wheel/e3fp 2022-06-04T15:17:52,798 creating build/bdist.linux-armv7l/wheel/e3fp/conformer 2022-06-04T15:17:52,799 copying build/lib/e3fp/conformer/protonation.py -> build/bdist.linux-armv7l/wheel/e3fp/conformer 2022-06-04T15:17:52,804 copying build/lib/e3fp/conformer/__init__.py -> build/bdist.linux-armv7l/wheel/e3fp/conformer 2022-06-04T15:17:52,807 copying build/lib/e3fp/conformer/generate.py -> build/bdist.linux-armv7l/wheel/e3fp/conformer 2022-06-04T15:17:52,812 copying build/lib/e3fp/conformer/generator.py -> build/bdist.linux-armv7l/wheel/e3fp/conformer 2022-06-04T15:17:52,816 copying build/lib/e3fp/conformer/util.py -> build/bdist.linux-armv7l/wheel/e3fp/conformer 2022-06-04T15:17:52,822 creating build/bdist.linux-armv7l/wheel/e3fp/config 2022-06-04T15:17:52,824 copying build/lib/e3fp/config/__init__.py -> build/bdist.linux-armv7l/wheel/e3fp/config 2022-06-04T15:17:52,827 copying build/lib/e3fp/config/params.py -> build/bdist.linux-armv7l/wheel/e3fp/config 2022-06-04T15:17:52,831 copying build/lib/e3fp/config/defaults.cfg -> build/bdist.linux-armv7l/wheel/e3fp/config 2022-06-04T15:17:52,836 creating build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,837 copying build/lib/e3fp/test/test_metrics.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,843 creating build/bdist.linux-armv7l/wheel/e3fp/test/data 2022-06-04T15:17:52,845 copying build/lib/e3fp/test/data/ritalin_nonplanar.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data 2022-06-04T15:17:52,850 creating build/bdist.linux-armv7l/wheel/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,851 copying build/lib/e3fp/test/data/rand_sdf_files/CHEMBL116226.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,860 copying build/lib/e3fp/test/data/rand_sdf_files/CHEMBL501745.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,871 copying build/lib/e3fp/test/data/rand_sdf_files/CHEMBL2114064.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,877 copying build/lib/e3fp/test/data/rand_sdf_files/CHEMBL197946.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,890 copying build/lib/e3fp/test/data/rand_sdf_files/CHEMBL282186.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data/rand_sdf_files 2022-06-04T15:17:52,906 copying build/lib/e3fp/test/data/caffeine_planar.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data 2022-06-04T15:17:52,910 copying build/lib/e3fp/test/data/ritalin_nonplanar.sdf -> build/bdist.linux-armv7l/wheel/e3fp/test/data 2022-06-04T15:17:52,913 copying build/lib/e3fp/test/data/stereo1.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data 2022-06-04T15:17:52,916 copying build/lib/e3fp/test/data/stereo2.sdf.bz2 -> build/bdist.linux-armv7l/wheel/e3fp/test/data 2022-06-04T15:17:52,920 copying build/lib/e3fp/test/__init__.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,923 copying build/lib/e3fp/test/test_util.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,927 copying build/lib/e3fp/test/test_fprint_db.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,931 copying build/lib/e3fp/test/test_dependencies.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,935 copying build/lib/e3fp/test/test_config.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,939 copying build/lib/e3fp/test/test_struct.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,944 copying build/lib/e3fp/test/test_fingerprinting.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,950 copying build/lib/e3fp/test/test_fingerprint.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,954 copying build/lib/e3fp/test/test_conformer.py -> build/bdist.linux-armv7l/wheel/e3fp/test 2022-06-04T15:17:52,959 creating build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:52,962 copying build/lib/e3fp/fingerprint/db.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:52,968 creating build/bdist.linux-armv7l/wheel/e3fp/fingerprint/metrics 2022-06-04T15:17:52,970 copying build/lib/e3fp/fingerprint/metrics/fprint_metrics.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint/metrics 2022-06-04T15:17:52,975 copying build/lib/e3fp/fingerprint/metrics/__init__.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint/metrics 2022-06-04T15:17:52,980 copying build/lib/e3fp/fingerprint/metrics/array_metrics.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint/metrics 2022-06-04T15:17:52,985 copying build/lib/e3fp/fingerprint/__init__.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:52,988 copying build/lib/e3fp/fingerprint/fprinter.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:52,994 copying build/lib/e3fp/fingerprint/array_ops.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:52,999 copying build/lib/e3fp/fingerprint/fprint.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:53,006 copying build/lib/e3fp/fingerprint/structs.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:53,011 copying build/lib/e3fp/fingerprint/generate.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:53,016 copying build/lib/e3fp/fingerprint/util.py -> build/bdist.linux-armv7l/wheel/e3fp/fingerprint 2022-06-04T15:17:53,019 copying build/lib/e3fp/util.py -> build/bdist.linux-armv7l/wheel/e3fp 2022-06-04T15:17:53,023 running install_egg_info 2022-06-04T15:17:53,665 Copying e3fp.egg-info to build/bdist.linux-armv7l/wheel/e3fp-1.2.4-py3.7.egg-info 2022-06-04T15:17:53,686 running install_scripts 2022-06-04T15:17:53,851 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2022-06-04T15:17:53,860 creating build/bdist.linux-armv7l/wheel/e3fp-1.2.4.dist-info/WHEEL 2022-06-04T15:17:53,865 creating '/tmp/pip-wheel-zn23wfh_/tmpsiiu6036/e3fp-1.2.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-06-04T15:17:53,871 adding 'e3fp/__init__.py' 2022-06-04T15:17:53,874 adding 'e3fp/pipeline.py' 2022-06-04T15:17:53,878 adding 'e3fp/util.py' 2022-06-04T15:17:53,882 adding 'e3fp/config/__init__.py' 2022-06-04T15:17:53,885 adding 'e3fp/config/defaults.cfg' 2022-06-04T15:17:53,889 adding 'e3fp/config/params.py' 2022-06-04T15:17:53,893 adding 'e3fp/conformer/__init__.py' 2022-06-04T15:17:53,899 adding 'e3fp/conformer/generate.py' 2022-06-04T15:17:53,905 adding 'e3fp/conformer/generator.py' 2022-06-04T15:17:53,909 adding 'e3fp/conformer/protonation.py' 2022-06-04T15:17:53,914 adding 'e3fp/conformer/util.py' 2022-06-04T15:17:53,919 adding 'e3fp/fingerprint/__init__.py' 2022-06-04T15:17:53,923 adding 'e3fp/fingerprint/array_ops.py' 2022-06-04T15:17:53,931 adding 'e3fp/fingerprint/db.py' 2022-06-04T15:17:53,944 adding 'e3fp/fingerprint/fprint.py' 2022-06-04T15:17:53,957 adding 'e3fp/fingerprint/fprinter.py' 2022-06-04T15:17:53,963 adding 'e3fp/fingerprint/generate.py' 2022-06-04T15:17:53,968 adding 'e3fp/fingerprint/structs.py' 2022-06-04T15:17:53,971 adding 'e3fp/fingerprint/util.py' 2022-06-04T15:17:53,976 adding 'e3fp/fingerprint/metrics/__init__.py' 2022-06-04T15:17:53,980 adding 'e3fp/fingerprint/metrics/array_metrics.py' 2022-06-04T15:17:53,984 adding 'e3fp/fingerprint/metrics/fprint_metrics.py' 2022-06-04T15:17:53,988 adding 'e3fp/test/__init__.py' 2022-06-04T15:17:53,990 adding 'e3fp/test/test_config.py' 2022-06-04T15:17:53,994 adding 'e3fp/test/test_conformer.py' 2022-06-04T15:17:53,997 adding 'e3fp/test/test_dependencies.py' 2022-06-04T15:17:54,000 adding 'e3fp/test/test_fingerprint.py' 2022-06-04T15:17:54,007 adding 'e3fp/test/test_fingerprinting.py' 2022-06-04T15:17:54,013 adding 'e3fp/test/test_fprint_db.py' 2022-06-04T15:17:54,017 adding 'e3fp/test/test_metrics.py' 2022-06-04T15:17:54,021 adding 'e3fp/test/test_struct.py' 2022-06-04T15:17:54,024 adding 'e3fp/test/test_util.py' 2022-06-04T15:17:54,028 adding 'e3fp/test/data/caffeine_planar.sdf.bz2' 2022-06-04T15:17:54,032 adding 'e3fp/test/data/ritalin_nonplanar.sdf' 2022-06-04T15:17:54,035 adding 'e3fp/test/data/ritalin_nonplanar.sdf.bz2' 2022-06-04T15:17:54,038 adding 'e3fp/test/data/stereo1.sdf.bz2' 2022-06-04T15:17:54,041 adding 'e3fp/test/data/stereo2.sdf.bz2' 2022-06-04T15:17:54,067 adding 'e3fp/test/data/rand_sdf_files/CHEMBL116226.sdf.bz2' 2022-06-04T15:17:54,126 adding 'e3fp/test/data/rand_sdf_files/CHEMBL197946.sdf.bz2' 2022-06-04T15:17:54,137 adding 'e3fp/test/data/rand_sdf_files/CHEMBL2114064.sdf.bz2' 2022-06-04T15:17:54,199 adding 'e3fp/test/data/rand_sdf_files/CHEMBL282186.sdf.bz2' 2022-06-04T15:17:54,244 adding 'e3fp/test/data/rand_sdf_files/CHEMBL501745.sdf.bz2' 2022-06-04T15:17:54,253 adding 'e3fp-1.2.4.dist-info/LICENSE.txt' 2022-06-04T15:17:54,257 adding 'e3fp-1.2.4.dist-info/METADATA' 2022-06-04T15:17:54,259 adding 'e3fp-1.2.4.dist-info/WHEEL' 2022-06-04T15:17:54,262 adding 'e3fp-1.2.4.dist-info/top_level.txt' 2022-06-04T15:17:54,265 adding 'e3fp-1.2.4.dist-info/RECORD' 2022-06-04T15:17:54,293 removing build/bdist.linux-armv7l/wheel 2022-06-04T15:17:54,325 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-04T15:17:54,326 ############################ 2022-06-04T15:17:54,327 # Package would be ignored # 2022-06-04T15:17:54,327 ############################ 2022-06-04T15:17:54,327 Python recognizes 'e3fp.fingerprint.metrics' as an importable package, however it is 2022-06-04T15:17:54,328 included in the distribution as "data". 2022-06-04T15:17:54,328 This behavior is likely to change in future versions of setuptools (and 2022-06-04T15:17:54,328 therefore is considered deprecated). 2022-06-04T15:17:54,329 Please make sure that 'e3fp.fingerprint.metrics' is included as a package by using 2022-06-04T15:17:54,329 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-04T15:17:54,330 You can read more about "package discovery" and "data files" on setuptools 2022-06-04T15:17:54,330 documentation page. 2022-06-04T15:17:54,331 !! 2022-06-04T15:17:54,332 check.warn(importable) 2022-06-04T15:17:54,333 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-04T15:17:54,335 ############################ 2022-06-04T15:17:54,335 # Package would be ignored # 2022-06-04T15:17:54,335 ############################ 2022-06-04T15:17:54,336 Python recognizes 'e3fp.test.data' as an importable package, however it is 2022-06-04T15:17:54,336 included in the distribution as "data". 2022-06-04T15:17:54,337 This behavior is likely to change in future versions of setuptools (and 2022-06-04T15:17:54,337 therefore is considered deprecated). 2022-06-04T15:17:54,338 Please make sure that 'e3fp.test.data' is included as a package by using 2022-06-04T15:17:54,339 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-04T15:17:54,339 You can read more about "package discovery" and "data files" on setuptools 2022-06-04T15:17:54,340 documentation page. 2022-06-04T15:17:54,341 !! 2022-06-04T15:17:54,342 check.warn(importable) 2022-06-04T15:17:54,342 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-04T15:17:54,344 ############################ 2022-06-04T15:17:54,345 # Package would be ignored # 2022-06-04T15:17:54,345 ############################ 2022-06-04T15:17:54,345 Python recognizes 'e3fp.test.data.rand_sdf_files' as an importable package, however it is 2022-06-04T15:17:54,346 included in the distribution as "data". 2022-06-04T15:17:54,346 This behavior is likely to change in future versions of setuptools (and 2022-06-04T15:17:54,347 therefore is considered deprecated). 2022-06-04T15:17:54,347 Please make sure that 'e3fp.test.data.rand_sdf_files' is included as a package by using 2022-06-04T15:17:54,348 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-04T15:17:54,349 You can read more about "package discovery" and "data files" on setuptools 2022-06-04T15:17:54,349 documentation page. 2022-06-04T15:17:54,350 !! 2022-06-04T15:17:54,351 check.warn(importable) 2022-06-04T15:17:54,602 Building wheel for e3fp (pyproject.toml): finished with status 'done' 2022-06-04T15:17:54,658 Created wheel for e3fp: filename=e3fp-1.2.4-py3-none-any.whl size=713719 sha256=52beca8d3745e542f7c4274b1628377127981fa20a1da33d8336abbf7b697a46 2022-06-04T15:17:54,660 Stored in directory: /tmp/pip-ephem-wheel-cache-af_2hixe/wheels/a9/70/5f/ff04743c07383dde4a1f725aafcd0a3a15855d364e6dc1a152 2022-06-04T15:17:54,687 Successfully built e3fp 2022-06-04T15:17:54,747 Removed build tracker: '/tmp/pip-build-tracker-elkd64cq'