2022-06-06T16:42:37,001 Created temporary directory: /tmp/pip-ephem-wheel-cache-4zlybqux
2022-06-06T16:42:37,007 Created temporary directory: /tmp/pip-req-tracker-rch1w6u5
2022-06-06T16:42:37,008 Initialized build tracking at /tmp/pip-req-tracker-rch1w6u5
2022-06-06T16:42:37,009 Created build tracker: /tmp/pip-req-tracker-rch1w6u5
2022-06-06T16:42:37,009 Entered build tracker: /tmp/pip-req-tracker-rch1w6u5
2022-06-06T16:42:37,010 Created temporary directory: /tmp/pip-wheel-o6c21qwv
2022-06-06T16:42:37,088 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-06-06T16:42:37,091 2 location(s) to search for versions of predictdssp:
2022-06-06T16:42:37,091 * https://pypi.org/simple/predictdssp/
2022-06-06T16:42:37,091 * https://www.piwheels.org/simple/predictdssp/
2022-06-06T16:42:37,092 Fetching project page and analyzing links: https://pypi.org/simple/predictdssp/
2022-06-06T16:42:37,094 Getting page https://pypi.org/simple/predictdssp/
2022-06-06T16:42:37,098 Found index url https://pypi.org/simple
2022-06-06T16:42:37,416   Found link https://files.pythonhosted.org/packages/31/f3/55707f64da51e936397851ed6f15b75cc0eb08988cdf53365ae7fc09e0d9/PredictDSSP-1.tar.gz#sha256=c29cb46d98b6e5979c404c68748cc4c5171254d49cc4cbf84e8c91a0faa230b8 (from https://pypi.org/simple/predictdssp/) (requires-python:>=3.5), version: 1
2022-06-06T16:42:37,417 Fetching project page and analyzing links: https://www.piwheels.org/simple/predictdssp/
2022-06-06T16:42:37,418 Getting page https://www.piwheels.org/simple/predictdssp/
2022-06-06T16:42:37,420 Found index url https://www.piwheels.org/simple
2022-06-06T16:42:37,668 Given no hashes to check 1 links for project 'predictdssp': discarding no candidates
2022-06-06T16:42:37,700 Collecting predictdssp==1
2022-06-06T16:42:37,703   Created temporary directory: /tmp/pip-unpack-zskgsk0z
2022-06-06T16:42:37,929   Downloading PredictDSSP-1.tar.gz (107 kB)
2022-06-06T16:42:38,199   Added predictdssp==1 from https://files.pythonhosted.org/packages/31/f3/55707f64da51e936397851ed6f15b75cc0eb08988cdf53365ae7fc09e0d9/PredictDSSP-1.tar.gz#sha256=c29cb46d98b6e5979c404c68748cc4c5171254d49cc4cbf84e8c91a0faa230b8 to build tracker '/tmp/pip-req-tracker-rch1w6u5'
2022-06-06T16:42:38,202     Running setup.py (path:/tmp/pip-wheel-o6c21qwv/predictdssp_82acc6125d2a47b2a33bc8719c0c57e8/setup.py) egg_info for package predictdssp
2022-06-06T16:42:38,203     Created temporary directory: /tmp/pip-pip-egg-info-0lj30_h8
2022-06-06T16:42:38,204     Running command python setup.py egg_info
2022-06-06T16:42:40,897     running egg_info
2022-06-06T16:42:40,902     creating /tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info
2022-06-06T16:42:40,906     writing /tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/PKG-INFO
2022-06-06T16:42:40,911     writing dependency_links to /tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/dependency_links.txt
2022-06-06T16:42:40,914     writing top-level names to /tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/top_level.txt
2022-06-06T16:42:40,917     writing requirements to /tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/requires.txt
2022-06-06T16:42:40,920     writing manifest file '/tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/SOURCES.txt'
2022-06-06T16:42:40,947     reading manifest file '/tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/SOURCES.txt'
2022-06-06T16:42:40,950     reading manifest template 'MANIFEST.in'
2022-06-06T16:42:40,958     /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1' to '1'
2022-06-06T16:42:40,959       warnings.warn(tmpl.format(**locals()))
2022-06-06T16:42:40,960     warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2022-06-06T16:42:40,960     warning: no previously-included files matching '__pycache__' found anywhere in distribution
2022-06-06T16:42:40,961     warning: no previously-included files matching '*.so' found anywhere in distribution
2022-06-06T16:42:40,968     writing manifest file '/tmp/pip-pip-egg-info-0lj30_h8/PredictDSSP.egg-info/SOURCES.txt'
2022-06-06T16:42:41,111   Source in /tmp/pip-wheel-o6c21qwv/predictdssp_82acc6125d2a47b2a33bc8719c0c57e8 has version 1, which satisfies requirement predictdssp==1 from https://files.pythonhosted.org/packages/31/f3/55707f64da51e936397851ed6f15b75cc0eb08988cdf53365ae7fc09e0d9/PredictDSSP-1.tar.gz#sha256=c29cb46d98b6e5979c404c68748cc4c5171254d49cc4cbf84e8c91a0faa230b8
2022-06-06T16:42:41,113   Removed predictdssp==1 from https://files.pythonhosted.org/packages/31/f3/55707f64da51e936397851ed6f15b75cc0eb08988cdf53365ae7fc09e0d9/PredictDSSP-1.tar.gz#sha256=c29cb46d98b6e5979c404c68748cc4c5171254d49cc4cbf84e8c91a0faa230b8 from build tracker '/tmp/pip-req-tracker-rch1w6u5'
2022-06-06T16:42:41,128 Created temporary directory: /tmp/pip-unpack-g2104pt6
2022-06-06T16:42:41,129 Building wheels for collected packages: predictdssp
2022-06-06T16:42:41,138   Created temporary directory: /tmp/pip-wheel-xxzavut7
2022-06-06T16:42:41,139   Building wheel for predictdssp (setup.py): started
2022-06-06T16:42:41,140   Destination directory: /tmp/pip-wheel-xxzavut7
2022-06-06T16:42:41,141   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-o6c21qwv/predictdssp_82acc6125d2a47b2a33bc8719c0c57e8/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-o6c21qwv/predictdssp_82acc6125d2a47b2a33bc8719c0c57e8/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-xxzavut7
2022-06-06T16:42:43,702   /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1' to '1'
2022-06-06T16:42:43,703     warnings.warn(tmpl.format(**locals()))
2022-06-06T16:42:43,813   running bdist_wheel
2022-06-06T16:42:43,824   running build
2022-06-06T16:42:43,825   running build_py
2022-06-06T16:42:43,840   creating build
2022-06-06T16:42:43,840   creating build/lib
2022-06-06T16:42:43,842   creating build/lib/PredictDSSP
2022-06-06T16:42:43,845   copying PredictDSSP/brnn_architecture.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,850   copying PredictDSSP/encode_sequence.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,856   copying PredictDSSP/dssp_graph.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,861   copying PredictDSSP/__init__.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,866   copying PredictDSSP/dssp_exceptions.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,872   copying PredictDSSP/dssp.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,879   copying PredictDSSP/_version.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,884   copying PredictDSSP/py_predictor_v2.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,890   copying PredictDSSP/dssp_tools.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,896   copying PredictDSSP/dssp_predict.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,902   copying PredictDSSP/uniprot_predictions.py -> build/lib/PredictDSSP
2022-06-06T16:42:43,909   creating build/lib/PredictDSSP/tests
2022-06-06T16:42:43,912   copying PredictDSSP/tests/test_PredictDSSP.py -> build/lib/PredictDSSP/tests
2022-06-06T16:42:43,917   copying PredictDSSP/tests/__init__.py -> build/lib/PredictDSSP/tests
2022-06-06T16:42:43,921   running egg_info
2022-06-06T16:42:43,941   writing dependency_links to PredictDSSP.egg-info/dependency_links.txt
2022-06-06T16:42:43,944   writing top-level names to PredictDSSP.egg-info/top_level.txt
2022-06-06T16:42:43,946   writing requirements to PredictDSSP.egg-info/requires.txt
2022-06-06T16:42:43,949   writing PredictDSSP.egg-info/PKG-INFO
2022-06-06T16:42:43,964   reading manifest file 'PredictDSSP.egg-info/SOURCES.txt'
2022-06-06T16:42:43,970   reading manifest template 'MANIFEST.in'
2022-06-06T16:42:43,978   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2022-06-06T16:42:43,979   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2022-06-06T16:42:43,980   warning: no previously-included files matching '*.so' found anywhere in distribution
2022-06-06T16:42:43,988   writing manifest file 'PredictDSSP.egg-info/SOURCES.txt'
2022-06-06T16:42:43,994   copying PredictDSSP/.DS_Store -> build/lib/PredictDSSP
2022-06-06T16:42:43,999   creating build/lib/PredictDSSP/data
2022-06-06T16:42:44,001   copying PredictDSSP/data/README.md -> build/lib/PredictDSSP/data
2022-06-06T16:42:44,006   copying PredictDSSP/data/look_and_say.dat -> build/lib/PredictDSSP/data
2022-06-06T16:42:44,011   creating build/lib/PredictDSSP/networks
2022-06-06T16:42:44,012   copying PredictDSSP/networks/.DS_Store -> build/lib/PredictDSSP/networks
2022-06-06T16:42:44,018   copying PredictDSSP/networks/dssp_2022_01_07_CB_thresh_0p8_hs20_nl2.pt -> build/lib/PredictDSSP/networks
2022-06-06T16:42:44,036   UPDATING build/lib/PredictDSSP/_version.py
2022-06-06T16:42:44,040   set build/lib/PredictDSSP/_version.py to 'v1'
2022-06-06T16:42:44,041   running build_scripts
2022-06-06T16:42:44,043   creating build/scripts-3.5
2022-06-06T16:42:44,045   copying and adjusting scripts/dssp-uniprot -> build/scripts-3.5
2022-06-06T16:42:44,049   copying and adjusting scripts/dssp-fasta -> build/scripts-3.5
2022-06-06T16:42:44,051   changing mode of build/scripts-3.5/dssp-uniprot from 644 to 755
2022-06-06T16:42:44,052   changing mode of build/scripts-3.5/dssp-fasta from 644 to 755
2022-06-06T16:42:44,060   installing to build/bdist.linux-armv7l/wheel
2022-06-06T16:42:44,060   running install
2022-06-06T16:42:44,062   running install_lib
2022-06-06T16:42:44,070   creating build/bdist.linux-armv7l
2022-06-06T16:42:44,071   creating build/bdist.linux-armv7l/wheel
2022-06-06T16:42:44,075   creating build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,077   copying build/lib/PredictDSSP/brnn_architecture.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,083   copying build/lib/PredictDSSP/.DS_Store -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,088   copying build/lib/PredictDSSP/encode_sequence.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,096   creating build/bdist.linux-armv7l/wheel/PredictDSSP/tests
2022-06-06T16:42:44,099   copying build/lib/PredictDSSP/tests/test_PredictDSSP.py -> build/bdist.linux-armv7l/wheel/PredictDSSP/tests
2022-06-06T16:42:44,105   copying build/lib/PredictDSSP/tests/__init__.py -> build/bdist.linux-armv7l/wheel/PredictDSSP/tests
2022-06-06T16:42:44,111   creating build/bdist.linux-armv7l/wheel/PredictDSSP/networks
2022-06-06T16:42:44,114   copying build/lib/PredictDSSP/networks/.DS_Store -> build/bdist.linux-armv7l/wheel/PredictDSSP/networks
2022-06-06T16:42:44,121   copying build/lib/PredictDSSP/networks/dssp_2022_01_07_CB_thresh_0p8_hs20_nl2.pt -> build/bdist.linux-armv7l/wheel/PredictDSSP/networks
2022-06-06T16:42:44,134   copying build/lib/PredictDSSP/dssp_graph.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,140   copying build/lib/PredictDSSP/__init__.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,147   creating build/bdist.linux-armv7l/wheel/PredictDSSP/data
2022-06-06T16:42:44,149   copying build/lib/PredictDSSP/data/README.md -> build/bdist.linux-armv7l/wheel/PredictDSSP/data
2022-06-06T16:42:44,155   copying build/lib/PredictDSSP/data/look_and_say.dat -> build/bdist.linux-armv7l/wheel/PredictDSSP/data
2022-06-06T16:42:44,160   copying build/lib/PredictDSSP/dssp_exceptions.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,166   copying build/lib/PredictDSSP/dssp.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,172   copying build/lib/PredictDSSP/_version.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,176   copying build/lib/PredictDSSP/py_predictor_v2.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,181   copying build/lib/PredictDSSP/dssp_tools.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,185   copying build/lib/PredictDSSP/dssp_predict.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,189   copying build/lib/PredictDSSP/uniprot_predictions.py -> build/bdist.linux-armv7l/wheel/PredictDSSP
2022-06-06T16:42:44,193   running install_egg_info
2022-06-06T16:42:44,217   Copying PredictDSSP.egg-info to build/bdist.linux-armv7l/wheel/PredictDSSP-1-py3.5.egg-info
2022-06-06T16:42:44,240   running install_scripts
2022-06-06T16:42:44,372   creating build/bdist.linux-armv7l/wheel/PredictDSSP-1.data
2022-06-06T16:42:44,373   creating build/bdist.linux-armv7l/wheel/PredictDSSP-1.data/scripts
2022-06-06T16:42:44,376   copying build/scripts-3.5/dssp-uniprot -> build/bdist.linux-armv7l/wheel/PredictDSSP-1.data/scripts
2022-06-06T16:42:44,380   copying build/scripts-3.5/dssp-fasta -> build/bdist.linux-armv7l/wheel/PredictDSSP-1.data/scripts
2022-06-06T16:42:44,383   changing mode of build/bdist.linux-armv7l/wheel/PredictDSSP-1.data/scripts/dssp-uniprot to 755
2022-06-06T16:42:44,384   changing mode of build/bdist.linux-armv7l/wheel/PredictDSSP-1.data/scripts/dssp-fasta to 755
2022-06-06T16:42:44,456   creating build/bdist.linux-armv7l/wheel/PredictDSSP-1.dist-info/WHEEL
2022-06-06T16:42:44,775   Building wheel for predictdssp (setup.py): finished with status 'done'
2022-06-06T16:42:44,781   Created wheel for predictdssp: filename=PredictDSSP-1-py3-none-any.whl size=92112 sha256=341feb380663f5a133901f185c38c8e5422ddf04312b1a02ece82cf577784b51
2022-06-06T16:42:44,781   Stored in directory: /tmp/pip-ephem-wheel-cache-4zlybqux/wheels/da/c5/9c/07ff0613239bca9bf5353d872a9c46550caaf19238226b484b
2022-06-06T16:42:44,801 Successfully built predictdssp
2022-06-06T16:42:44,822 Removed build tracker: '/tmp/pip-req-tracker-rch1w6u5'