2022-06-06T20:30:02,471 Created temporary directory: /tmp/pip-ephem-wheel-cache-7ckfp62v
2022-06-06T20:30:02,476 Created temporary directory: /tmp/pip-build-tracker-0td91mns
2022-06-06T20:30:02,477 Initialized build tracking at /tmp/pip-build-tracker-0td91mns
2022-06-06T20:30:02,477 Created build tracker: /tmp/pip-build-tracker-0td91mns
2022-06-06T20:30:02,478 Entered build tracker: /tmp/pip-build-tracker-0td91mns
2022-06-06T20:30:02,479 Created temporary directory: /tmp/pip-wheel-siemd0lh
2022-06-06T20:30:02,548 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-06-06T20:30:02,556 2 location(s) to search for versions of pytrimal:
2022-06-06T20:30:02,556 * https://pypi.org/simple/pytrimal/
2022-06-06T20:30:02,556 * https://www.piwheels.org/simple/pytrimal/
2022-06-06T20:30:02,557 Fetching project page and analyzing links: https://pypi.org/simple/pytrimal/
2022-06-06T20:30:02,558 Getting page https://pypi.org/simple/pytrimal/
2022-06-06T20:30:02,562 Found index url https://pypi.org/simple
2022-06-06T20:30:02,738   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e7/92/deb27aec34cc7863b866ea29900d2e47e17511e771fd93e4a9f73ad6b8ac/pytrimal-0.1.0-cp310-cp310-macosx_10_15_x86_64.whl#sha256=7ac40ae8834c6246941caba5c28ceba9631310e96b740ace4bb344852f36a06b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,738   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ec/60/4797839372e3883bb134efc65c098c3c6c4d96d8022e41400a1a8a90bb0b/pytrimal-0.1.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=77d22b9309c6394e026ef8fc6b1ece370675afe246210531846e7c22a27e16cd (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,739   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/4b/f5/1d7233b1405054090c3b53605b27bad7119dd1c6238bdc174bb4b10b5df2/pytrimal-0.1.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=14f1df21be7edec3b02a6f08b0a0ebf323d2fb24590dca90462ef7e11f367895 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,739   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/48/2f/69945d01f3d8af3f9a8442c7d5a0fa19f7c81361d568bc856bf502c8ae9a/pytrimal-0.1.0-cp35-cp35m-macosx_10_14_x86_64.whl#sha256=0a2042a306ffc01083b26cd2945b6d5ba89d9082db20ec93186717c054b4e1b1 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,740   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a9/c2/ccddd18f9a1918b79b346e0d856a2f08971ce68e25d780a9446e3a53860b/pytrimal-0.1.0-cp35-cp35m-manylinux2010_x86_64.whl#sha256=2cabfe69e6cb6aaf76b37a39598b253c05412cd39f7c89deac90d56d42126692 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,740   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/05/6b/cd4cd3b14e9b5644113e3e51cc15a839b3068231cec06441de8f99632b3a/pytrimal-0.1.0-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=ed3a1e341ba3c9678be46a8c3ae58fcbf2769e1a37baf901b4dca546382f1f83 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,741   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/56/0f/65a63a8cbd8e7ee8e80afec55bda84b4e236841224f9a7221595c00a1dba/pytrimal-0.1.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=cdaa9038a4aeb8eb2ba412951bb5621d328d83caa17181490764983269a13e3b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,742   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/0a/38/92fb02233538de1e77eb533350ed7d14068ef1a6f031462f11bce08e05df/pytrimal-0.1.0-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=d8a629fcad2206efc074ab17e47b2a03d5a2df2d374be11ba53afda0c10c269f (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,742   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/2e/4d/af840c124e2b391640d8df3045b4cdb2bb0eb4d952fe95acd65a0f9043e7/pytrimal-0.1.0-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=444ef85979b7456875ece6c283930a2955244d7b3de09b894d1f893a19a5095e (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,743   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/75/3d/52511029b5d404a58457debf7d60a8fca6b4fd4322db7d2073d8026119b2/pytrimal-0.1.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=8395af2505b928c812356425cc11eb1762542e53fdbc9a92c18477900f5939af (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,743   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d1/cd/2b631d34ee040ffa60a48b58b0c38e5dc41d5f5251fd27f47a4f16650392/pytrimal-0.1.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=86445e44e5917738fffb693e162f5e6f7912b86a100e86b54d46c9f27f47d670 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,744   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/8b/6c/b9e93831941b14de3a41445333d9e09e2389378754527ab0743ff97ab5c7/pytrimal-0.1.0-cp38-cp38-macosx_10_15_x86_64.whl#sha256=527a3b22729af435d86134d20cef0fbc54bc9bd7cc61531f4565f6b3787d88f9 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,744   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/94/1c/dab45d42e6fb9f9f2e8a4e76da1722faadf7eba1254c912b07e443398499/pytrimal-0.1.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=8f0e6c857362571b1e859540dfaf3f2ad95b162ef06e16a90a5ee32a6c617237 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,745   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d9/f8/113e5e8ffc20f0477eb2c20d59e0e64c6d5dda295af95eb6979bd2efee93/pytrimal-0.1.0-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=3e4c96d07fab29f287e898b702ff1504ce4e5cac9378d79d51967a021e46e050 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,745   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/cd/ca/e3bc1316c04c94ba11885b933473ce229863522b438a112c27b2fbfe080e/pytrimal-0.1.0-cp39-cp39-macosx_10_15_x86_64.whl#sha256=38d34b9f2e2afeccb4da9c7850260217e31062f0038f36978978bc90d9ffb3e1 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,746   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/7c/15/c057ace451e9ccc70f96639e56461ca403ba2c829af6c6bbf777d36494df/pytrimal-0.1.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=e9bc72bde38b3e4fd075f1f8f8f7d9d5a8d7c0f7bbd42f72688c74e527327a32 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,746   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6c/78/0a693856b86c7e419cfebe567e5c8ceafe8339b5600762d8cd8566607de9/pytrimal-0.1.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=0e62099e372edbc13fd5b4175a65254bab26850dbec6807cba86135a67add2b5 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,747   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/2c/e4/b946aca9e551aa0dd6cd90705547b979e4834cb5a63834121f4f911461e3/pytrimal-0.1.0-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c8db855bc7409c535403bd81120fa8d623e52aeddb96d055e5fd826c8ee16dce (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,747   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/19/48/1283651eccc18b73c1f0c4af418db4a831d1ef949d9edbdbf8a47f40d2a8/pytrimal-0.1.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=1fa01edbdce1d5bddbf98be5df21cd9dd59a703cf8365448ba5a634e7946bf1a (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,748   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/84/24/1bc90c83278945f66b31974a2aba5bf3e9d4b272d78790120748bf9485f5/pytrimal-0.1.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=cb0ecf1eea08b25da60a2cbadc2015bd9393148d1c60918dd4e68f0ec84bfa39 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,749   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b1/6d/7d46cda527909bd41ead416342e24999e8cc63c82560bfaf5918fd708af7/pytrimal-0.1.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=f460c96c2a032554984102bb7e57c7d4cc61d1abf1069e1362747f65a49fdf96 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,749   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/aa/bae9c9761abe07e00fa0dc292ef343354f2e508e9ce37f72f8754dfb7903/pytrimal-0.1.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=30d6cf22157d9b29d5c3afb945f93f180c3c385e2b21ca688183d737ec7a48ff (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,751   Found link https://files.pythonhosted.org/packages/39/09/11aae9fa483929539f100beb384da40724188ff102ee94517b4a3ccba5c8/pytrimal-0.1.0.tar.gz#sha256=1af23728d26de53950644e1bdd1803a7fb8d9d6c6cb0c4aa38953c4fd0afe994 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.1.0
2022-06-06T20:30:02,751   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/cd/95/15ba2a87e8ef78e2362fb9fa9900f0cee75d4938f92d2d889b0e8cd09f71/pytrimal-0.1.1-cp310-cp310-macosx_10_15_x86_64.whl#sha256=cde8e4142c6ea1e5ebd35d81a4e93be816efb23a12c928d2522349577724a425 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,752   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/16/99/4b6ddc7537fa853cadf9d9ef81af95019c58003d5119febce6af8bddedcb/pytrimal-0.1.1-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=d037f9d14b4dec97c2fce851bad205c8c9ea46a3dde4a8fb7f0f39ed4a2d9e70 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,752   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b5/c3/e1edfbe9450b0c2d23d36fa8e624dc28220d7f23ddaf3e46829c18c1725b/pytrimal-0.1.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=93b5ad25babcd407da31ff1dcea921de0dc18eafadbd17a9ab25e964a08d45df (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,753   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9b/c9/655540ff5e71515c6a37a61e71b5dcc9b3c29515a7ed7601dd40f7e5e8ce/pytrimal-0.1.1-cp35-cp35m-macosx_10_14_x86_64.whl#sha256=5c7a6f54f525b5d8902660ad56ef89b460332c586a75fd1fd20efdc95cf22e97 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,753   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/1c/85/3880bc8ccfc099b68d8e18baf2aa194127082c0cdf274833c13e83cee1a9/pytrimal-0.1.1-cp35-cp35m-manylinux2010_x86_64.whl#sha256=9686c407bf596ef2a2d123d3b133cf1977562273c64a3b140a649403994ecb8d (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,754   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/61/43/dc432a69a7f2a59f4e5e509c206f1178d56b401206cc661957179c9ddeae/pytrimal-0.1.1-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=2cbfd6359e677fad3885d99af6be30da10fe0d1e95cdbc65484b22ff3416fbc4 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,754   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/12/7a/53b39f4d3b3ae1da433bae3111d667d3d5813bece2a4b19bcc4a21fd11fa/pytrimal-0.1.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=19ad1b204530940193eca5cb407cbc5a9caf9217ef09d66380e0a61adc15e7dd (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,755   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/77/8b/87f775f8f50c6f3b32813d272f7534fa00372db8cdb41ceda4971662368f/pytrimal-0.1.1-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=25fe1d0d110d26bcbf2e1486c5df482e57eb04fb5afb2d846d87b3beed446822 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,756   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e5/e5/9bd5e09db10f69b2d749e985a5da7b66e98688f285bddf7f5a666301aff3/pytrimal-0.1.1-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=29a4451db228da9f40e3d63bfd5fe957884d728ba4ca8f4b7ca84844dd9e0f90 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,756   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/da/35/5ce9cbae068eb2d7fb9c03aa07281308751a38c3d6bdb521c69345fefbda/pytrimal-0.1.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=425f1f9bf612e91c1f74b42578ac6d570737c099c220aa9cbea6448ee6b5bf31 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,757   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/74/22/25d73231abb8d9553a4be31493a8034544d1c16ee60204ab408c7406973d/pytrimal-0.1.1-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=3750218a87c26619134a2e3b683dbb0e3ac4931e2a36fde4924483e052372ea4 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,757   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/72/34/deec927936c24cad8d5dd6b1d8e503e9087a9e08312ebe4cae88beb217ce/pytrimal-0.1.1-cp38-cp38-macosx_10_15_x86_64.whl#sha256=61f35b5ff95e57ae34eefff455903d142ce6483ea53dc119a46c183d97314899 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,758   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/27/f7/10554d83d0ec45d5500b9e98eaca33706103b94ee91c6f6bf9964b0a380c/pytrimal-0.1.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=65a2b64a8c0f97d3f612b68f0961b7d3f5433e383959b256543e0c0f73b20165 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,758   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/41/c7/044460829089c368091d78f9a8b99327e789d33fb1e7bd1803ea66b3113b/pytrimal-0.1.1-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=b37161d15b051c54970f4ec201de7b5eac97be854f94a8f6ead1959b8abb380b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,759   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6f/9e/05203b6f71b87fb6ecd15c3e9c574abe49252c23207bffd33946e11dff82/pytrimal-0.1.1-cp39-cp39-macosx_10_15_x86_64.whl#sha256=79225c6ea3a4d5dbab116b470481b26e4704a33472f8ae4567ed4ce58605de74 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,759   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/bb/db/7c0fa4d3e5d996d2c9714a53e4391aba90f5fc2d532e43dce4af051da656/pytrimal-0.1.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=20a99b74a063130d2f999cbf3723549715c502baab1dbe28339bcfe0dd2ade1a (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,760   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/71/c2/de54862ac53e4644da95cc5d45c9e5dac1d461692ee5db20d380429b29df/pytrimal-0.1.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=2cc304e66208eeea4732f0fb751fa4212aa5a9606e62f289ecde42e8e95f5f7c (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,760   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f3/9f/268de33e758c07ddaca562b49fc69e05e2754bcfebd1ebd981e259eeff6f/pytrimal-0.1.1-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=256a8ef5404d334442c82dabac708f970ec96bdc023087697220151238ecc4a2 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,761   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/36/58/d74103e669267602491f2ed32f9d2579844fa18da914f0397bf096daa911/pytrimal-0.1.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=6a44c2e9cab526603dbe45d2abacd973dab841c01b0deacfe2b618fa2abfa435 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,761   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9c/63/539c1d358fe0952f7df82e2bb7bec9810385121673cc93859955b2c5aed1/pytrimal-0.1.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=072dd3c338713e79d6cd327bbb6c83df30b05ea56884614cd16e637dfa3792ca (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,762   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ae/ca/58bd8a813592f678c7d550bf0ddcc625922a2f891b4c53b2062c71aaa1a1/pytrimal-0.1.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=9a441f0a8810c42469e30086dace493dbf7c360a8c328ddb6719b3084b07101d (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,762   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/c4/8b/f4066f88bce2590fbad7a52d52588c23a7410a07e5b278925ecf5b0bf934/pytrimal-0.1.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=3c4d25b7ec0467576eeac127f2ec05912fca109c16e26e72726e8410a638496b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,764   Found link https://files.pythonhosted.org/packages/86/c4/83edee2cc512ab4e6f48160b4f7e737681a8b0cabf4df5798ed32656e062/pytrimal-0.1.1.tar.gz#sha256=afaf88c657e631d573f3b951c845ac2d69d260b2a9c7a84b483f8fff2e9cce70 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.1.1
2022-06-06T20:30:02,764   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/24/1b/3c52d892348ffe2df0778d09e3650dc5f6e524d01333a1842067f14af62d/pytrimal-0.1.2-cp310-cp310-macosx_10_15_x86_64.whl#sha256=e65742e7d6e9233a0417c5000485b156c4e12312b7359b021e85a78541d2267b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,765   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6d/3e/26e2fc28d6f07c55b6279ec9785098ba866ea41a892e542160efdeb1b755/pytrimal-0.1.2-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=dd84c7e4d0bf2ea9a0f1c72276257ed7ea15b994ae76468db71816bc68397c50 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,765   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/c9/f7/fd0b169d7447de46c232e11e04a5b880448effa3e94e15121b5df4369106/pytrimal-0.1.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=a83f10fd025954186a33660ab431f784b0a7567121c1a4c646c81070a94fbb45 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,766   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/8a/ed/fc33fc64e959980eb54d0b506d8983b4a92999f5f8ecf21a504fd22b25b3/pytrimal-0.1.2-cp35-cp35m-macosx_10_14_x86_64.whl#sha256=6ef97f79d2d7b5da815943f9b543cbd052f97d4d9cf02e3dd3346c309cc6e069 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,767   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d5/fd/b234fd262c716f2c9b201cabc7b26f2ccdb60e34c9695034ddfdda347d00/pytrimal-0.1.2-cp35-cp35m-manylinux2010_x86_64.whl#sha256=ac3df92814819af7081d24cd06435a90ac111fbdc5ee2791962e908a3e5eb670 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,767   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b5/e6/a8bc5bea8875b2bb52a443d2467a8048e1ee4f99c8f35f3bd215c26b51b6/pytrimal-0.1.2-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=497bffa15e479b554ba92199a16b37f64d647db6bf37c5298135c7376c9005b3 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,768   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/91/c9/ba2d80eea0746c3bccd4ab0e1ebcbf520ef759430502e44f7c81fa53c651/pytrimal-0.1.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=8963da79d13a974d5db847f5d8e19eeded8a5dc301c9be9591089de0023e7cfd (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,768   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/80/55/ac4a531b5f9ab21dca1e4b21fd7a0ec1adf82e8f1062de13585589821bb0/pytrimal-0.1.2-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=241a9c1190cbccf97566cb6d4d5ab4eb6f2b2634ea3546ad4be074e8f08c0771 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,769   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/05/2e/4fc2d442e3005e34ba85f5123d19aa2792dba2c6af1eec5456baba1ef66b/pytrimal-0.1.2-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=bacf1cdf963108ca2bf336938ef17b1e6f26afe39c5976eae6a838a7ee2b58c6 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,769   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/23/59/f4e10f20bbfe8bf34b2e38543ec73e04ea9f56d95142e0724f90616fa427/pytrimal-0.1.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=05b3209c579a846608766329366a69b3241ac7dc628568e7439c95486dee0856 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,770   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/5a/16/36f73560aa5d2627ba84d23cbb4b0d6a30c20b5e179ff26bf287ac603721/pytrimal-0.1.2-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=f545edc9bc11627f428286847878b3d51c37316b905559b20bb0193da7c0f9d0 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,770   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a2/24/9b43cf80a445706c5c08117fa967f740acdd11167fa1dc0f6810e01ec8b4/pytrimal-0.1.2-cp38-cp38-macosx_10_15_x86_64.whl#sha256=cef05d99d3ca63df3fa52ee7482a7763e8fdab18733ccd007c054aeadd6d609e (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,771   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/fc/e2/a798c77f4b6d8a0f06a3ef92d2f5d05c865c4a7ce91de705b85691f76196/pytrimal-0.1.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=bb394ce06be51a91bbd0b159ae1a928a98216af1342d5d68a152c957a18b357f (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,771   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/4c/f4/116b6c912b4dab32fefed37ac072702cb45ec87b9854236bafde9bfef12f/pytrimal-0.1.2-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=eb9d30ec484b308d38735920e2913836fc70002389c0992a88920e89bf0999a9 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,772   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f3/34/3be16ccee3ce5ec94a6d9a2f83beafc2fd4f7a51b2806c03b3b46f14433d/pytrimal-0.1.2-cp39-cp39-macosx_10_15_x86_64.whl#sha256=5b8745b09a369885adb9745476f34cc7e6a0959974d8193eeeee125f65ab053b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,773   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/1e/25/a2bfe3b916c029ab201db9b77ab789e70591cf3f9f8c0fcd95ac78824c7e/pytrimal-0.1.2-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=059eb4da6d6158518abfc36a9ad048e3b3b7535a3eeb901a7d3f2ebf9f416cc7 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,773   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ca/ca/6a8fb95c6d7d73a36e20283f12c13bb17ad1bfc71e7a58bbd5f546d2a720/pytrimal-0.1.2-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=bf27c551a443b583405b4a0736e522efa5fd8623584d43bc8d6103c3a9622221 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,774   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/8e/00/2f4c24fac8b530c8e66f5ed1b593a38346bd5a6e3d7d1473f7818b98cf1f/pytrimal-0.1.2-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c4c0cda6c215440f91a952291f25c6ad418f21926f00ad68a8364689050361c1 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,774   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/83/22/73461217ee23720834993d13a3ddbdd4dc49e1dda18c9a810b0effef1faf/pytrimal-0.1.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=8c4dd7597176581d886f141ae413c0b04e8915aabf979897939768a5a1043223 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,775   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ae/90/ec8c2726618ff74741dc87b626808192f7e8e88f04d1c8467ebe589ed88c/pytrimal-0.1.2-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=30493458cddcf6be8bb5e1fd2b60e950c980c16943a29994b63c93d06ba8dd6b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,775   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b8/65/d1ae935e5c78469a2a35b07bef9915adfe50d46b5138bd3ee6996e125b95/pytrimal-0.1.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=edaa588782951a61cdcc9324e1b772024a4c20761027dbb9343276e1c0e09c3d (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,776   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d6/d0/e6d9db538fce39b6411ee7f1d4ad12e206f161ce0d6c8f7fad68721ed33a/pytrimal-0.1.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=40d9e3eefa14c7cb61d4e923c44940e90c20baae4e76ce707ba65df851a2b983 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,777   Found link https://files.pythonhosted.org/packages/bb/9f/09b1393ef649cd099cd2eae2f3044b441d688578cf1570c108171581d29e/pytrimal-0.1.2.tar.gz#sha256=4d179c12795f3e9f50075bcf201f31a15d379ee9698b5c3514c6a66799dc143a (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.1.2
2022-06-06T20:30:02,778   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b8/5c/be1fe9c15ce6811d668dd80332f18a167d53d785128ae810662e0d42b744/pytrimal-0.2.0-cp310-cp310-macosx_10_15_x86_64.whl#sha256=8c4ddc27717299e7c487448dd7c27af8f0f8a63be1666c6174907cc4d2a85f3a (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,778   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/bf/7b/104aa07074f5806820ca3c2e113601e5a1835c465992cb184ce45afa58a2/pytrimal-0.2.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=1789f411e0d985cfc08db0e55a4e40e275cdde6f546ac34a91332c15dc2e6a60 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,779   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/56/57/c4ba8cc35ba9d797b6f084caae9cc85a6194359b195ba8cbd2e87a763eb9/pytrimal-0.2.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=0a0eb24d9184d0b7857332365a04f07faf823397474fc4ff8d750060a80fa9d3 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,779   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9c/cb/bc35ab42ef81be74d22cf5910c25995244cd57b7e61b74b28089b58a39e4/pytrimal-0.2.0-cp35-cp35m-macosx_10_14_x86_64.whl#sha256=65038e4f11e2dc9b3338dd5d705c41568d714a45e8d312639803764c8b3fcd2e (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,780   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f5/4b/b62d869a5d1957aa4a4e7952d2db0f5cff33ee9fe84e6f10a51ef3cb6e63/pytrimal-0.2.0-cp35-cp35m-manylinux2010_x86_64.whl#sha256=a6da431f309519153956387c58f8a5c820145a6feb10d6c893ce3a68351c80e6 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,780   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/2c/52/4a83895a000377cb7c9fa5b0fffad39a69d10937cb454f2145df6d3ce386/pytrimal-0.2.0-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=a93cd239ff5c8a7ad8962cf734365f305a167075f438afbb3db2f359cab4e6c9 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,781   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/05/a0/283e91965913e7665d7fd43b976d4d658d38049601bcbb70924a7c5efe69/pytrimal-0.2.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=246fba48745453163134d2ff92fba5469ac1aff5d9099056cd41ce86905b3f42 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,781   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/4f/11ad2e10ffa2a44e11135131980b4666521c84b67f6d9630523461006d18/pytrimal-0.2.0-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=34a1f12c19d961946a6071ca3cea9b212c5fb78e0ed0bc2534de448916d6e162 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,782   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/7e/57/cb81ba05ac3347e98ed13460c724bbc7cbeadae5c45d2900b288d794f766/pytrimal-0.2.0-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=ffae08f047fea3b58303a1537738c05ac1a274f40eb1e7f5d02c75ea50802e2e (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,783   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/87/84/5eb4953b5e3e91343c4add38cdba0940926bb9066cd704f645aab79c4a8a/pytrimal-0.2.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=915cb2ea65d1180ff04f1e3f1d57b038dd92dc78e6e3f71d2dbb5c4696759603 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,783   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6b/3d/6927e855abfcceab79c54af1760d1fdeb36379f96e76671284a0dde8d11e/pytrimal-0.2.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=85a8b4f5ec48edb8b5dbcbeeb25a95fc928d0c9de3d7dd7e2ada7c16bcbbb4ee (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,784   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/29/f8/cac08f56c1c8b48f8caab3ff24bc55e88666b4b95748322e1de6066d386e/pytrimal-0.2.0-cp38-cp38-macosx_10_15_x86_64.whl#sha256=ae7da4810bdb56126bbdc5566c63f862fba9e8817a979097a38189457095946b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,784   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/4b/ba/df02c20b2298a9fafdc3cfca5cfe4f29e43e6442fd8d6575a593cc3add8c/pytrimal-0.2.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=be90b9682e5f40fd8fe5bd92ccd77d7b94a7f6ee0b091de4942459de7b9e7eb0 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,785   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e1/95/27211ddd9fd79e30f4fe76635c26b20c651d1f5cc1cb9287cfdb55472c95/pytrimal-0.2.0-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=45a2a58e067441b460473466cfea08c436b3fc6897e9e6116b293921e692b725 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,785   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/a6/a473f9d5f7bb2a019f33a9ba624d6f7991ea0e9d6c0bfc30b3ba0e0899ad/pytrimal-0.2.0-cp39-cp39-macosx_10_15_x86_64.whl#sha256=075b870fc1b0ddf215431dfa54592abddcb18777417194f5f2df97e31f5a7c19 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,786   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/15/e5/874093542f1d7a14d760c739034e3d22cc259fa77071fb98c95d5a01ab39/pytrimal-0.2.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=d04b808453673061fce5ce3312d671d48265071956619b12c7cda9f78d3683c5 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,786   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ee/87/c2ffbd4e8dee903a30963368be4a235f88bf95b59a2adc2e5526ff52368b/pytrimal-0.2.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl#sha256=bbce5e52c0153977dcada8c4cb254b9315445ea60eded235213869515a9b058a (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,787   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d3/a5/1bb5b37e2ae6fe57e7a5cf42d7639ef7d8b065a5bba77ff34ce4bcc15a46/pytrimal-0.2.0-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=338b9fc1939415524baf3a63de8c88fd62319649a63e0343ea112de5cf0268ee (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,787   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/fe/84/89fae956a9e9fd58eaaafde8b141d31c6f83ecf24ac3cc3eac84ba0a8bb8/pytrimal-0.2.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=a472eadc50d1fc6bad17c452031c4c76a6265b80567a58783aa22baf1e4ab114 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,788   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/79/c8/10e1f96fb3d717376b82174d22ab290e94cd3c341f1de584a9b16c108efe/pytrimal-0.2.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=48ef7ba796007c26214efea0419e5d80935f09d790c590fedb122fab20e0ebbb (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,788   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/73/ec/02d057c82444dd419679c88912041f7202635d49e1f620f28ac2dba6cfd9/pytrimal-0.2.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=c3fd18c9e95ac2f4aa20e1b61c00c0d13aa1c423aab15ffe47be5847e66880a1 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,789   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a3/a4/df4748e403eedb360ed770e226179f6a96da6d80a49ed0b8765b45550d2c/pytrimal-0.2.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=a92c7686d9488b470690a8aa26aa3dc0c2a6e70ee8bb833a2b0a0418c75ff675 (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:02,790   Found link https://files.pythonhosted.org/packages/25/e1/7e8730c04a44f986c1236c4e28c41f49c4e1ccee98d36992eb591209ced9/pytrimal-0.2.0.tar.gz#sha256=432e7d01cbcc5dcc268cd9728154c364fb783e4530aa64fe3e37651d7cd3627b (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.2.0
2022-06-06T20:30:02,791 Fetching project page and analyzing links: https://www.piwheels.org/simple/pytrimal/
2022-06-06T20:30:02,792 Getting page https://www.piwheels.org/simple/pytrimal/
2022-06-06T20:30:02,794 Found index url https://www.piwheels.org/simple
2022-06-06T20:30:03,018   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=b22cc6f8f6e39214cc9d6ef2778b8811ddb859aeca9ad030b64d78cc83816438 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,019   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=b22cc6f8f6e39214cc9d6ef2778b8811ddb859aeca9ad030b64d78cc83816438 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,019   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp35-cp35m-linux_armv7l.whl#sha256=c2e192c5e15e398eb8fcf987e378ac23645cf88ae7b43798f959edf36711e847 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,020   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp35-cp35m-linux_armv6l.whl#sha256=c2e192c5e15e398eb8fcf987e378ac23645cf88ae7b43798f959edf36711e847 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,020   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp39-cp39-linux_armv7l.whl#sha256=8335602183caad582c8928ea691b7be0671b701f02fd9489681d90efd6708863 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,021   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp39-cp39-linux_armv6l.whl#sha256=8335602183caad582c8928ea691b7be0671b701f02fd9489681d90efd6708863 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,021   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp37-cp37m-linux_armv7l.whl#sha256=37809e659b1a6d0ae65708c8315d044d8b3ed5fa169c916d23a800715869074c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,022   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp37-cp37m-linux_armv6l.whl#sha256=37809e659b1a6d0ae65708c8315d044d8b3ed5fa169c916d23a800715869074c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,022   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=4a3dcfa05641310e339af037687c7171ffa116dab65617ebd2d9661d937375ee (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,023   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=4a3dcfa05641310e339af037687c7171ffa116dab65617ebd2d9661d937375ee (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,023   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp39-cp39-linux_armv7l.whl#sha256=c54c9649d97022e8ce47cce412b180621f9a77399bf9c58ef855e08f913a237f (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,024   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp39-cp39-linux_armv6l.whl#sha256=c54c9649d97022e8ce47cce412b180621f9a77399bf9c58ef855e08f913a237f (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,024   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp37-cp37m-linux_armv7l.whl#sha256=37299a0c9633838823df1040fad4ea675ea5d693df9331240e4dc04f1797003c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,025   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp37-cp37m-linux_armv6l.whl#sha256=37299a0c9633838823df1040fad4ea675ea5d693df9331240e4dc04f1797003c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,025   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp35-cp35m-linux_armv7l.whl#sha256=ed62deb3aed080a21ff74516c43aecc431d77412aff60dbbc4ba6282beee2b7d (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,026   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp35-cp35m-linux_armv6l.whl#sha256=ed62deb3aed080a21ff74516c43aecc431d77412aff60dbbc4ba6282beee2b7d (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-06-06T20:30:03,027 Skipping link: not a file: https://www.piwheels.org/simple/pytrimal/
2022-06-06T20:30:03,027 Skipping link: not a file: https://pypi.org/simple/pytrimal/
2022-06-06T20:30:03,073 Given no hashes to check 1 links for project 'pytrimal': discarding no candidates
2022-06-06T20:30:03,115 Collecting pytrimal==0.2.0
2022-06-06T20:30:03,119   Created temporary directory: /tmp/pip-unpack-m36ve773
2022-06-06T20:30:03,213   Downloading pytrimal-0.2.0.tar.gz (8.6 MB)
2022-06-06T20:30:11,784   Added pytrimal==0.2.0 from https://files.pythonhosted.org/packages/25/e1/7e8730c04a44f986c1236c4e28c41f49c4e1ccee98d36992eb591209ced9/pytrimal-0.2.0.tar.gz#sha256=432e7d01cbcc5dcc268cd9728154c364fb783e4530aa64fe3e37651d7cd3627b to build tracker '/tmp/pip-build-tracker-0td91mns'
2022-06-06T20:30:11,794   Created temporary directory: /tmp/pip-build-env-y12aplqp
2022-06-06T20:30:11,815   Created temporary directory: /tmp/pip-standalone-pip-7zd2iuox
2022-06-06T20:30:14,051   Installing build dependencies: started
2022-06-06T20:30:14,054   Running command pip subprocess to install build dependencies
2022-06-06T20:30:25,436   Using pip 22.1 from /tmp/pip-standalone-pip-7zd2iuox/__env_pip__.zip/pip (python 3.9)
2022-06-06T20:30:26,887   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-06-06T20:30:30,758   Collecting setuptools>=46.4
2022-06-06T20:30:31,043     Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.3.2-py3-none-any.whl (1.2 MB)
2022-06-06T20:30:34,683   Collecting cython~=0.29.16
2022-06-06T20:30:35,826     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.30-cp39-cp39-linux_armv7l.whl (5.0 MB)
2022-06-06T20:30:40,216   Installing collected packages: setuptools, cython
2022-06-06T20:30:51,838     Creating /tmp/pip-build-env-y12aplqp/overlay/bin
2022-06-06T20:30:51,843     changing mode of /tmp/pip-build-env-y12aplqp/overlay/bin/cygdb to 755
2022-06-06T20:30:51,847     changing mode of /tmp/pip-build-env-y12aplqp/overlay/bin/cython to 755
2022-06-06T20:30:51,851     changing mode of /tmp/pip-build-env-y12aplqp/overlay/bin/cythonize to 755
2022-06-06T20:30:51,899   Successfully installed cython-0.29.30 setuptools-62.3.2
2022-06-06T20:30:52,090   WARNING: There was an error checking the latest version of pip.
2022-06-06T20:30:52,638   Installing build dependencies: finished with status 'done'
2022-06-06T20:30:52,665   Getting requirements to build wheel: started
2022-06-06T20:30:52,667   Running command Getting requirements to build wheel
2022-06-06T20:30:55,457   Getting requirements to build wheel: finished with status 'done'
2022-06-06T20:30:55,495   Created temporary directory: /tmp/pip-standalone-pip-pqf02o_y
2022-06-06T20:30:57,713   Installing backend dependencies: started
2022-06-06T20:30:57,716   Running command pip subprocess to install backend dependencies
2022-06-06T20:31:08,936   Using pip 22.1 from /tmp/pip-standalone-pip-pqf02o_y/__env_pip__.zip/pip (python 3.9)
2022-06-06T20:31:10,415   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-06-06T20:31:11,306   Collecting wheel
2022-06-06T20:31:11,339     Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB)
2022-06-06T20:31:14,631   Installing collected packages: wheel
2022-06-06T20:31:14,924     Creating /tmp/pip-build-env-y12aplqp/normal/bin
2022-06-06T20:31:14,928     changing mode of /tmp/pip-build-env-y12aplqp/normal/bin/wheel to 755
2022-06-06T20:31:14,955   Successfully installed wheel-0.37.1
2022-06-06T20:31:15,141   WARNING: There was an error checking the latest version of pip.
2022-06-06T20:31:15,553   Installing backend dependencies: finished with status 'done'
2022-06-06T20:31:15,575   Created temporary directory: /tmp/pip-modern-metadata-eg12kysv
2022-06-06T20:31:15,582   Preparing metadata (pyproject.toml): started
2022-06-06T20:31:15,584   Running command Preparing metadata (pyproject.toml)
2022-06-06T20:31:20,501   running dist_info
2022-06-06T20:31:21,114   creating /tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info
2022-06-06T20:31:21,704   writing /tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info/PKG-INFO
2022-06-06T20:31:22,267   writing dependency_links to /tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info/dependency_links.txt
2022-06-06T20:31:25,607   writing top-level names to /tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info/top_level.txt
2022-06-06T20:31:25,610   writing manifest file '/tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info/SOURCES.txt'
2022-06-06T20:31:26,305   reading manifest file '/tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info/SOURCES.txt'
2022-06-06T20:31:26,308   reading manifest template 'MANIFEST.in'
2022-06-06T20:31:27,279   warning: no previously-included files matching '*.html' found under directory 'pytrimal'
2022-06-06T20:31:27,287   warning: no files found matching '*.pxd' under directory 'pytrimal/patch'
2022-06-06T20:31:27,287   adding license file 'COPYING'
2022-06-06T20:31:27,318   writing manifest file '/tmp/pip-modern-metadata-eg12kysv/pytrimal.egg-info/SOURCES.txt'
2022-06-06T20:31:27,322   creating '/tmp/pip-modern-metadata-eg12kysv/pytrimal-0.2.0.dist-info'
2022-06-06T20:31:27,512   adding license file "COPYING" (matched pattern "COPYING*")
2022-06-06T20:31:27,760   Preparing metadata (pyproject.toml): finished with status 'done'
2022-06-06T20:31:27,776   Source in /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff has version 0.2.0, which satisfies requirement pytrimal==0.2.0 from https://files.pythonhosted.org/packages/25/e1/7e8730c04a44f986c1236c4e28c41f49c4e1ccee98d36992eb591209ced9/pytrimal-0.2.0.tar.gz#sha256=432e7d01cbcc5dcc268cd9728154c364fb783e4530aa64fe3e37651d7cd3627b
2022-06-06T20:31:27,778   Removed pytrimal==0.2.0 from https://files.pythonhosted.org/packages/25/e1/7e8730c04a44f986c1236c4e28c41f49c4e1ccee98d36992eb591209ced9/pytrimal-0.2.0.tar.gz#sha256=432e7d01cbcc5dcc268cd9728154c364fb783e4530aa64fe3e37651d7cd3627b from build tracker '/tmp/pip-build-tracker-0td91mns'
2022-06-06T20:31:27,793 Created temporary directory: /tmp/pip-unpack-hqv0hasw
2022-06-06T20:31:27,795 Building wheels for collected packages: pytrimal
2022-06-06T20:31:27,806   Created temporary directory: /tmp/pip-wheel-gts2gdz6
2022-06-06T20:31:27,806   Destination directory: /tmp/pip-wheel-gts2gdz6
2022-06-06T20:31:27,811   Building wheel for pytrimal (pyproject.toml): started
2022-06-06T20:31:27,813   Running command Building wheel for pytrimal (pyproject.toml)
2022-06-06T20:31:32,231   running bdist_wheel
2022-06-06T20:31:32,327   running build
2022-06-06T20:31:32,327   running build_py
2022-06-06T20:31:32,924   creating build
2022-06-06T20:31:32,925   creating build/lib.linux-armv7l-cpython-39
2022-06-06T20:31:32,926   creating build/lib.linux-armv7l-cpython-39/pytrimal
2022-06-06T20:31:32,928   copying pytrimal/__init__.py -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-06-06T20:31:32,932   copying pytrimal/_version.py -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-06-06T20:31:32,936   creating build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,937   copying pytrimal/tests/test_alignment.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,941   copying pytrimal/tests/test_similarity_matrix.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,945   copying pytrimal/tests/test_automatic_trimmer.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,948   copying pytrimal/tests/test_manual_trimmer.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,951   copying pytrimal/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,954   copying pytrimal/tests/test_doctest.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,957   copying pytrimal/tests/__main__.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,961   creating build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:32,962   copying pytrimal/tests/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:32,973   copying pytrimal/py.typed -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-06-06T20:31:32,976   copying pytrimal/_trimal.pyi -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-06-06T20:31:32,980   copying pytrimal/tests/requirements.txt -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-06-06T20:31:32,984   copying pytrimal/tests/data/ENOG411BWBU.cons40.gt40.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:32,999   copying pytrimal/tests/data/halorhodopsin.afa -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,012   copying pytrimal/tests/data/example.001.AA.clw -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,016   copying pytrimal/tests/data/ENOG411BWBU.id50.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,021   copying pytrimal/tests/data/ENOG411BWBU.strict.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,037   copying pytrimal/tests/data/ENOG411BWBU.strictplus.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,052   copying pytrimal/tests/data/pam70.json -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,057   copying pytrimal/tests/data/ENOG411BWBU.gappyout.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,071   copying pytrimal/tests/data/ENOG411BWBU.automated1.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,087   copying pytrimal/tests/data/ENOG411BWBU.noallgaps.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,111   copying pytrimal/tests/data/ENOG411BWBU.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,131   copying pytrimal/tests/data/ENOG411BWBU.id70.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,139   copying pytrimal/tests/data/ENOG411BWBU.cons60.gt90.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-06-06T20:31:33,155   running build_clib
2022-06-06T20:31:33,169   creating build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,170   generating build/temp.linux-armv7l-cpython-39/libcpu_features.a from vendor/cpu_features/src/impl_arm_linux_or_android.c, vendor/cpu_features/src/filesystem.c, vendor/cpu_features/src/stack_line_reader.c, vendor/cpu_features/src/string_view.c, vendor/cpu_features/src/copy.inl, vendor/cpu_features/src/define_introspection.inl, vendor/cpu_features/src/define_introspection_and_hwcaps.inl, vendor/cpu_features/src/equals.inl, vendor/cpu_features/src/impl_x86__base_implementation.inl
2022-06-06T20:31:33,171   building cpu_features with unix compiler
2022-06-06T20:31:33,171   generating build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.c from vendor/cpu_features/src/impl_arm_linux_or_android.c
2022-06-06T20:31:33,171   copying vendor/cpu_features/src/impl_arm_linux_or_android.c -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,176   generating build/temp.linux-armv7l-cpython-39/filesystem.c from vendor/cpu_features/src/filesystem.c
2022-06-06T20:31:33,177   copying vendor/cpu_features/src/filesystem.c -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,180   generating build/temp.linux-armv7l-cpython-39/stack_line_reader.c from vendor/cpu_features/src/stack_line_reader.c
2022-06-06T20:31:33,180   copying vendor/cpu_features/src/stack_line_reader.c -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,184   generating build/temp.linux-armv7l-cpython-39/string_view.c from vendor/cpu_features/src/string_view.c
2022-06-06T20:31:33,185   copying vendor/cpu_features/src/string_view.c -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,189   generating build/temp.linux-armv7l-cpython-39/copy.inl from vendor/cpu_features/src/copy.inl
2022-06-06T20:31:33,189   copying vendor/cpu_features/src/copy.inl -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,193   generating build/temp.linux-armv7l-cpython-39/define_introspection.inl from vendor/cpu_features/src/define_introspection.inl
2022-06-06T20:31:33,193   copying vendor/cpu_features/src/define_introspection.inl -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,196   generating build/temp.linux-armv7l-cpython-39/define_introspection_and_hwcaps.inl from vendor/cpu_features/src/define_introspection_and_hwcaps.inl
2022-06-06T20:31:33,197   copying vendor/cpu_features/src/define_introspection_and_hwcaps.inl -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,200   generating build/temp.linux-armv7l-cpython-39/equals.inl from vendor/cpu_features/src/equals.inl
2022-06-06T20:31:33,201   copying vendor/cpu_features/src/equals.inl -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,204   generating build/temp.linux-armv7l-cpython-39/impl_x86__base_implementation.inl from vendor/cpu_features/src/impl_x86__base_implementation.inl
2022-06-06T20:31:33,204   copying vendor/cpu_features/src/impl_x86__base_implementation.inl -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:33,213   generating build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o from build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.c
2022-06-06T20:31:33,214   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.c -o build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o
2022-06-06T20:31:34,481   generating build/temp.linux-armv7l-cpython-39/filesystem.o from build/temp.linux-armv7l-cpython-39/filesystem.c
2022-06-06T20:31:34,483   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/filesystem.c -o build/temp.linux-armv7l-cpython-39/filesystem.o
2022-06-06T20:31:34,854   generating build/temp.linux-armv7l-cpython-39/stack_line_reader.o from build/temp.linux-armv7l-cpython-39/stack_line_reader.c
2022-06-06T20:31:34,856   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/stack_line_reader.c -o build/temp.linux-armv7l-cpython-39/stack_line_reader.o
2022-06-06T20:31:35,284   generating build/temp.linux-armv7l-cpython-39/string_view.o from build/temp.linux-armv7l-cpython-39/string_view.c
2022-06-06T20:31:35,286   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/string_view.c -o build/temp.linux-armv7l-cpython-39/string_view.o
2022-06-06T20:31:36,158   generating build/temp.linux-armv7l-cpython-39/libcpu_features.a from build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o, build/temp.linux-armv7l-cpython-39/filesystem.o, build/temp.linux-armv7l-cpython-39/stack_line_reader.o, build/temp.linux-armv7l-cpython-39/string_view.o, build/temp.linux-armv7l-cpython-39/copy.inl, build/temp.linux-armv7l-cpython-39/define_introspection.inl, build/temp.linux-armv7l-cpython-39/define_introspection_and_hwcaps.inl, build/temp.linux-armv7l-cpython-39/equals.inl, build/temp.linux-armv7l-cpython-39/impl_x86__base_implementation.inl
2022-06-06T20:31:36,159   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libcpu_features.a build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o build/temp.linux-armv7l-cpython-39/filesystem.o build/temp.linux-armv7l-cpython-39/stack_line_reader.o build/temp.linux-armv7l-cpython-39/string_view.o build/temp.linux-armv7l-cpython-39/copy.inl build/temp.linux-armv7l-cpython-39/define_introspection.inl build/temp.linux-armv7l-cpython-39/define_introspection_and_hwcaps.inl build/temp.linux-armv7l-cpython-39/equals.inl build/temp.linux-armv7l-cpython-39/impl_x86__base_implementation.inl
2022-06-06T20:31:36,228   generating build/temp.linux-armv7l-cpython-39/libtrimal.a from vendor/trimal/source/Cleaner.cpp, vendor/trimal/source/Alignment/Alignment.cpp, vendor/trimal/source/Alignment/sequencesMatrix.cpp, vendor/trimal/source/Statistics/similarityMatrix.cpp, vendor/trimal/source/Statistics/Mold.cpp, vendor/trimal/source/Statistics/Gaps.cpp, vendor/trimal/source/Statistics/Manager.cpp, vendor/trimal/source/Statistics/Similarity.cpp, vendor/trimal/source/Statistics/Consistency.cpp, vendor/trimal/source/reportMessages/errorMessages.cpp, vendor/trimal/source/reportMessages/infoMessages.cpp, vendor/trimal/source/reportMessages/warningMessages.cpp, vendor/trimal/source/FormatHandling/nexus_m10_state.cpp, vendor/trimal/source/FormatHandling/mega_sequential_state.cpp, vendor/trimal/source/FormatHandling/phylip_paml_m10_state.cpp, vendor/trimal/source/FormatHandling/phylip32_state.cpp, vendor/trimal/source/FormatHandling/nexus_state.cpp, vendor/trimal/source/FormatHandling/fasta_state.cpp, vendor/trimal/source/FormatHandling/phylip_paml_state.cpp, vendor/trimal/source/FormatHandling/phylip40_m10_state.cpp, vendor/trimal/source/FormatHandling/mega_interleaved_state.cpp, vendor/trimal/source/FormatHandling/clustal_state.cpp, vendor/trimal/source/FormatHandling/phylip40_state.cpp, vendor/trimal/source/FormatHandling/pir_state.cpp, vendor/trimal/source/FormatHandling/phylip32_m10_state.cpp, vendor/trimal/source/FormatHandling/fasta_m10_state.cpp, vendor/trimal/source/FormatHandling/htmlreport_state.cpp, vendor/trimal/source/FormatHandling/BaseFormatHandler.cpp, vendor/trimal/source/utils.cpp, vendor/trimal/source/InternalBenchmarker.cpp, vendor/trimal/source/trimalManager.cpp, vendor/trimal/source/VCFHandler.cpp
2022-06-06T20:31:36,229   building trimal with unix compiler
2022-06-06T20:31:36,230   generating build/temp.linux-armv7l-cpython-39/trimalManager.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/trimalManager.h
2022-06-06T20:31:36,241   generating build/temp.linux-armv7l-cpython-39/defines.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/defines.h
2022-06-06T20:31:36,245   generating build/temp.linux-armv7l-cpython-39/values.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/values.h
2022-06-06T20:31:36,250   generating build/temp.linux-armv7l-cpython-39/reportsystem.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/reportsystem.h
2022-06-06T20:31:36,262   generating build/temp.linux-armv7l-cpython-39/Cleaner.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Cleaner.h
2022-06-06T20:31:36,274   generating build/temp.linux-armv7l-cpython-39/utils.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/utils.h
2022-06-06T20:31:36,285   generating build/temp.linux-armv7l-cpython-39/InternalBenchmarker.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/InternalBenchmarker.h
2022-06-06T20:31:36,291   generating build/temp.linux-armv7l-cpython-39/VCFHandler.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/VCFHandler.h
2022-06-06T20:31:36,299   creating build/temp.linux-armv7l-cpython-39/FormatHandling
2022-06-06T20:31:36,300   generating build/temp.linux-armv7l-cpython-39/FormatHandling/fasta_m10_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/fasta_m10_state.h
2022-06-06T20:31:36,304   generating build/temp.linux-armv7l-cpython-39/FormatHandling/formats_header.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/formats_header.h
2022-06-06T20:31:36,307   generating build/temp.linux-armv7l-cpython-39/FormatHandling/htmlreport_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/htmlreport_state.h
2022-06-06T20:31:36,311   generating build/temp.linux-armv7l-cpython-39/FormatHandling/clustal_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/clustal_state.h
2022-06-06T20:31:36,315   generating build/temp.linux-armv7l-cpython-39/FormatHandling/fasta_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/fasta_state.h
2022-06-06T20:31:36,318   generating build/temp.linux-armv7l-cpython-39/FormatHandling/mega_interleaved_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/mega_interleaved_state.h
2022-06-06T20:31:36,322   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip_paml_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/phylip_paml_state.h
2022-06-06T20:31:36,325   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip32_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/phylip32_state.h
2022-06-06T20:31:36,329   generating build/temp.linux-armv7l-cpython-39/FormatHandling/BaseFormatHandler.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/BaseFormatHandler.h
2022-06-06T20:31:36,334   generating build/temp.linux-armv7l-cpython-39/FormatHandling/pir_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/pir_state.h
2022-06-06T20:31:36,338   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip40_m10_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/phylip40_m10_state.h
2022-06-06T20:31:36,341   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip40_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/phylip40_state.h
2022-06-06T20:31:36,345   generating build/temp.linux-armv7l-cpython-39/FormatHandling/nexus_m10_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/nexus_m10_state.h
2022-06-06T20:31:36,348   generating build/temp.linux-armv7l-cpython-39/FormatHandling/mega_sequential_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/mega_sequential_state.h
2022-06-06T20:31:36,352   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip_paml_m10_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/phylip_paml_m10_state.h
2022-06-06T20:31:36,356   generating build/temp.linux-armv7l-cpython-39/FormatHandling/nexus_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/nexus_state.h
2022-06-06T20:31:36,359   generating build/temp.linux-armv7l-cpython-39/FormatHandling/FormatManager.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/FormatManager.h
2022-06-06T20:31:36,366   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip32_m10_state.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/FormatHandling/phylip32_m10_state.h
2022-06-06T20:31:36,370   creating build/temp.linux-armv7l-cpython-39/Statistics
2022-06-06T20:31:36,371   generating build/temp.linux-armv7l-cpython-39/Statistics/similarityMatrix.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Statistics/similarityMatrix.h
2022-06-06T20:31:36,377   generating build/temp.linux-armv7l-cpython-39/Statistics/Consistency.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Statistics/Consistency.h
2022-06-06T20:31:36,383   generating build/temp.linux-armv7l-cpython-39/Statistics/Manager.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Statistics/Manager.h
2022-06-06T20:31:36,388   generating build/temp.linux-armv7l-cpython-39/Statistics/Gaps.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Statistics/Gaps.h
2022-06-06T20:31:36,393   generating build/temp.linux-armv7l-cpython-39/Statistics/Mold.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Statistics/Mold.h
2022-06-06T20:31:36,397   generating build/temp.linux-armv7l-cpython-39/Statistics/Similarity.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Statistics/Similarity.h
2022-06-06T20:31:36,402   creating build/temp.linux-armv7l-cpython-39/RawText
2022-06-06T20:31:36,403   generating build/temp.linux-armv7l-cpython-39/RawText/examples.txt from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/RawText/examples.txt
2022-06-06T20:31:36,407   generating build/temp.linux-armv7l-cpython-39/RawText/menu.txt from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/RawText/menu.txt
2022-06-06T20:31:36,416   generating build/temp.linux-armv7l-cpython-39/RawText/legacyMenu.txt from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/RawText/legacyMenu.txt
2022-06-06T20:31:36,423   creating build/temp.linux-armv7l-cpython-39/Alignment
2022-06-06T20:31:36,424   generating build/temp.linux-armv7l-cpython-39/Alignment/sequencesMatrix.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Alignment/sequencesMatrix.h
2022-06-06T20:31:36,430   generating build/temp.linux-armv7l-cpython-39/Alignment/Alignment.h from /tmp/pip-wheel-siemd0lh/pytrimal_f5891ebab4264ed1b8ee3e2aaace84ff/vendor/trimal/include/Alignment/Alignment.h
2022-06-06T20:31:36,436   generating build/temp.linux-armv7l-cpython-39/Cleaner.cpp from vendor/trimal/source/Cleaner.cpp
2022-06-06T20:31:36,437   copying vendor/trimal/source/Cleaner.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,444   generating build/temp.linux-armv7l-cpython-39/Alignment.cpp from vendor/trimal/source/Alignment/Alignment.cpp
2022-06-06T20:31:36,445   copying vendor/trimal/source/Alignment/Alignment.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,453   generating build/temp.linux-armv7l-cpython-39/sequencesMatrix.cpp from vendor/trimal/source/Alignment/sequencesMatrix.cpp
2022-06-06T20:31:36,454   copying vendor/trimal/source/Alignment/sequencesMatrix.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,458   generating build/temp.linux-armv7l-cpython-39/similarityMatrix.cpp from vendor/trimal/source/Statistics/similarityMatrix.cpp
2022-06-06T20:31:36,459   copying vendor/trimal/source/Statistics/similarityMatrix.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,463   generating build/temp.linux-armv7l-cpython-39/Mold.cpp from vendor/trimal/source/Statistics/Mold.cpp
2022-06-06T20:31:36,464   copying vendor/trimal/source/Statistics/Mold.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,468   generating build/temp.linux-armv7l-cpython-39/Gaps.cpp from vendor/trimal/source/Statistics/Gaps.cpp
2022-06-06T20:31:36,469   copying vendor/trimal/source/Statistics/Gaps.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,474   generating build/temp.linux-armv7l-cpython-39/Manager.cpp from vendor/trimal/source/Statistics/Manager.cpp
2022-06-06T20:31:36,474   copying vendor/trimal/source/Statistics/Manager.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,478   generating build/temp.linux-armv7l-cpython-39/Similarity.cpp from vendor/trimal/source/Statistics/Similarity.cpp
2022-06-06T20:31:36,479   copying vendor/trimal/source/Statistics/Similarity.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,484   generating build/temp.linux-armv7l-cpython-39/Consistency.cpp from vendor/trimal/source/Statistics/Consistency.cpp
2022-06-06T20:31:36,484   copying vendor/trimal/source/Statistics/Consistency.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,490   generating build/temp.linux-armv7l-cpython-39/errorMessages.cpp from vendor/trimal/source/reportMessages/errorMessages.cpp
2022-06-06T20:31:36,490   copying vendor/trimal/source/reportMessages/errorMessages.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,495   generating build/temp.linux-armv7l-cpython-39/infoMessages.cpp from vendor/trimal/source/reportMessages/infoMessages.cpp
2022-06-06T20:31:36,495   copying vendor/trimal/source/reportMessages/infoMessages.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,498   generating build/temp.linux-armv7l-cpython-39/warningMessages.cpp from vendor/trimal/source/reportMessages/warningMessages.cpp
2022-06-06T20:31:36,499   copying vendor/trimal/source/reportMessages/warningMessages.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,502   generating build/temp.linux-armv7l-cpython-39/nexus_m10_state.cpp from vendor/trimal/source/FormatHandling/nexus_m10_state.cpp
2022-06-06T20:31:36,502   copying vendor/trimal/source/FormatHandling/nexus_m10_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,506   generating build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp from vendor/trimal/source/FormatHandling/mega_sequential_state.cpp
2022-06-06T20:31:36,507   copying vendor/trimal/source/FormatHandling/mega_sequential_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,510   generating build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.cpp from vendor/trimal/source/FormatHandling/phylip_paml_m10_state.cpp
2022-06-06T20:31:36,511   copying vendor/trimal/source/FormatHandling/phylip_paml_m10_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,514   generating build/temp.linux-armv7l-cpython-39/phylip32_state.cpp from vendor/trimal/source/FormatHandling/phylip32_state.cpp
2022-06-06T20:31:36,515   copying vendor/trimal/source/FormatHandling/phylip32_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,518   generating build/temp.linux-armv7l-cpython-39/nexus_state.cpp from vendor/trimal/source/FormatHandling/nexus_state.cpp
2022-06-06T20:31:36,519   copying vendor/trimal/source/FormatHandling/nexus_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,523   generating build/temp.linux-armv7l-cpython-39/fasta_state.cpp from vendor/trimal/source/FormatHandling/fasta_state.cpp
2022-06-06T20:31:36,523   copying vendor/trimal/source/FormatHandling/fasta_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,527   generating build/temp.linux-armv7l-cpython-39/phylip_paml_state.cpp from vendor/trimal/source/FormatHandling/phylip_paml_state.cpp
2022-06-06T20:31:36,527   copying vendor/trimal/source/FormatHandling/phylip_paml_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,530   generating build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp from vendor/trimal/source/FormatHandling/phylip40_m10_state.cpp
2022-06-06T20:31:36,531   copying vendor/trimal/source/FormatHandling/phylip40_m10_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,534   generating build/temp.linux-armv7l-cpython-39/mega_interleaved_state.cpp from vendor/trimal/source/FormatHandling/mega_interleaved_state.cpp
2022-06-06T20:31:36,535   copying vendor/trimal/source/FormatHandling/mega_interleaved_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,539   generating build/temp.linux-armv7l-cpython-39/clustal_state.cpp from vendor/trimal/source/FormatHandling/clustal_state.cpp
2022-06-06T20:31:36,539   copying vendor/trimal/source/FormatHandling/clustal_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,543   generating build/temp.linux-armv7l-cpython-39/phylip40_state.cpp from vendor/trimal/source/FormatHandling/phylip40_state.cpp
2022-06-06T20:31:36,543   copying vendor/trimal/source/FormatHandling/phylip40_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,547   generating build/temp.linux-armv7l-cpython-39/pir_state.cpp from vendor/trimal/source/FormatHandling/pir_state.cpp
2022-06-06T20:31:36,548   copying vendor/trimal/source/FormatHandling/pir_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,552   generating build/temp.linux-armv7l-cpython-39/phylip32_m10_state.cpp from vendor/trimal/source/FormatHandling/phylip32_m10_state.cpp
2022-06-06T20:31:36,552   copying vendor/trimal/source/FormatHandling/phylip32_m10_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,556   generating build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp from vendor/trimal/source/FormatHandling/fasta_m10_state.cpp
2022-06-06T20:31:36,556   copying vendor/trimal/source/FormatHandling/fasta_m10_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,560   generating build/temp.linux-armv7l-cpython-39/htmlreport_state.cpp from vendor/trimal/source/FormatHandling/htmlreport_state.cpp
2022-06-06T20:31:36,560   copying vendor/trimal/source/FormatHandling/htmlreport_state.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,564   generating build/temp.linux-armv7l-cpython-39/BaseFormatHandler.cpp from vendor/trimal/source/FormatHandling/BaseFormatHandler.cpp
2022-06-06T20:31:36,565   copying vendor/trimal/source/FormatHandling/BaseFormatHandler.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,569   generating build/temp.linux-armv7l-cpython-39/utils.cpp from vendor/trimal/source/utils.cpp
2022-06-06T20:31:36,569   copying vendor/trimal/source/utils.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,575   generating build/temp.linux-armv7l-cpython-39/InternalBenchmarker.cpp from vendor/trimal/source/InternalBenchmarker.cpp
2022-06-06T20:31:36,576   copying vendor/trimal/source/InternalBenchmarker.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,579   generating build/temp.linux-armv7l-cpython-39/trimalManager.cpp from vendor/trimal/source/trimalManager.cpp
2022-06-06T20:31:36,580   copying vendor/trimal/source/trimalManager.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,588   generating build/temp.linux-armv7l-cpython-39/VCFHandler.cpp from vendor/trimal/source/VCFHandler.cpp
2022-06-06T20:31:36,589   copying vendor/trimal/source/VCFHandler.cpp -> build/temp.linux-armv7l-cpython-39
2022-06-06T20:31:36,595   generating build/temp.linux-armv7l-cpython-39/Cleaner.o from build/temp.linux-armv7l-cpython-39/Cleaner.cpp
2022-06-06T20:31:36,596   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Cleaner.cpp -o build/temp.linux-armv7l-cpython-39/Cleaner.o
2022-06-06T20:31:37,630   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1449: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:31:37,631    1449 |     #pragma omp parallel for num_threads(NUMTHREADS) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-06-06T20:31:37,631         |
2022-06-06T20:31:37,631   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1457: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:31:37,632    1457 |     #pragma omp parallel for num_threads(NUMTHREADS) private(j, k, hit, dst) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-06-06T20:31:37,632         |
2022-06-06T20:31:40,848   build/temp.linux-armv7l-cpython-39/Cleaner.cpp: In member function ‘Alignment* Cleaner::cleanStrict(int, const int*, float, const float*, bool, bool)’:
2022-06-06T20:31:40,849   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:519:12: warning: unused variable ‘x’ [-Wunused-variable]
2022-06-06T20:31:40,849     519 |     int i, x, pos, counter, lenBlock;
2022-06-06T20:31:40,850         |            ^
2022-06-06T20:31:40,886   build/temp.linux-armv7l-cpython-39/Cleaner.cpp: In member function ‘Alignment* Cleaner::getClustering(float)’:
2022-06-06T20:31:40,887   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1217:12: warning: unused variable ‘j’ [-Wunused-variable]
2022-06-06T20:31:40,887    1217 |     int i, j, *clustering;
2022-06-06T20:31:40,888         |            ^
2022-06-06T20:31:40,900   build/temp.linux-armv7l-cpython-39/Cleaner.cpp: In member function ‘void Cleaner::removeAllGapsSeqsAndCols(bool, bool)’:
2022-06-06T20:31:40,900   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1382:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:31:40,901    1382 |             for (j = 0; j < alig->sequences[i].length(); j++) {
2022-06-06T20:31:40,901         |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:31:40,901   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1393:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:31:40,902    1393 |             if (j == alig->sequences[i].length()) {
2022-06-06T20:31:40,902         |                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:31:49,589   generating build/temp.linux-armv7l-cpython-39/Alignment.o from build/temp.linux-armv7l-cpython-39/Alignment.cpp
2022-06-06T20:31:49,590   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Alignment.cpp -o build/temp.linux-armv7l-cpython-39/Alignment.o
2022-06-06T20:31:50,604   build/temp.linux-armv7l-cpython-39/Alignment.cpp:395: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:31:50,605     395 |     #pragma omp parallel for num_threads(NUMTHREADS) if(numberOfSequences>MINPARALLELSIZE)
2022-06-06T20:31:50,605         |
2022-06-06T20:31:50,606   build/temp.linux-armv7l-cpython-39/Alignment.cpp:398: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:31:50,606     398 |     #pragma omp parallel for num_threads(NUMTHREADS) collapse(2) private(k, shared, referenceLength) if(numberOfSequences>MINPARALLELSIZE)
2022-06-06T20:31:50,606         |
2022-06-06T20:31:50,607   build/temp.linux-armv7l-cpython-39/Alignment.cpp:930: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:31:50,607     930 |     #pragma omp parallel for private(k, mx, avg, pos) reduction(+: avgSeq, maxAvgSeq) num_threads(NUMTHREADS) if(originalNumberOfSequences>MINPARALLELSIZE)
2022-06-06T20:31:50,608         |
2022-06-06T20:31:53,758   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘Alignment* Alignment::getTranslationCDS(Alignment*)’:
2022-06-06T20:31:53,758   build/temp.linux-armv7l-cpython-39/Alignment.cpp:204:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,759     204 |         for (y = 0, counter = 0; y < ProtAlig->sequences[x].size(); y++) {
2022-06-06T20:31:53,759         |                                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:31:53,786   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘bool Alignment::prepareCodingSequence(bool, bool, Alignment*)’:
2022-06-06T20:31:53,786   build/temp.linux-armv7l-cpython-39/Alignment.cpp:614:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,787     614 |             if ((found != string::npos) && (((int) found % 3) == 0)) {
2022-06-06T20:31:53,787         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-06-06T20:31:53,793   build/temp.linux-armv7l-cpython-39/Alignment.cpp:641:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,793     641 |         } while (found != string::npos);
2022-06-06T20:31:53,794         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-06-06T20:31:53,794   build/temp.linux-armv7l-cpython-39/Alignment.cpp:651:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,794     651 |             if ((found != string::npos) && (((int) found % 3) == 0)) {
2022-06-06T20:31:53,795         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-06-06T20:31:53,801   build/temp.linux-armv7l-cpython-39/Alignment.cpp:676:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,801     676 |         } while (found != string::npos);
2022-06-06T20:31:53,801         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-06-06T20:31:53,802   build/temp.linux-armv7l-cpython-39/Alignment.cpp:685:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,802     685 |             if ((found != string::npos) && (((int) found % 3) == 0)) {
2022-06-06T20:31:53,803         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-06-06T20:31:53,808   build/temp.linux-armv7l-cpython-39/Alignment.cpp:711:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,809     711 |         } while (found != string::npos);
2022-06-06T20:31:53,809         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-06-06T20:31:53,829   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘bool Alignment::fillMatrices(bool, bool)’:
2022-06-06T20:31:53,830   build/temp.linux-armv7l-cpython-39/Alignment.cpp:810:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,830     810 |             for (j = 0; j < sequences[i].length(); j++)
2022-06-06T20:31:53,830         |                         ~~^~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:31:53,834   build/temp.linux-armv7l-cpython-39/Alignment.cpp:837:35: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:31:53,835     837 |         if (sequences[i].length() != numberOfResidues) {
2022-06-06T20:31:53,835         |             ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2022-06-06T20:31:53,840   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘void Alignment::printAlignmentInfo(std::ostream&)’:
2022-06-06T20:31:53,840   build/temp.linux-armv7l-cpython-39/Alignment.cpp:889:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:31:53,840     889 |         for (j = 0, valid_res = 0; j < sequences[i].length(); j++)
2022-06-06T20:31:53,841         |                                    ~~^~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:32:20,669   generating build/temp.linux-armv7l-cpython-39/sequencesMatrix.o from build/temp.linux-armv7l-cpython-39/sequencesMatrix.cpp
2022-06-06T20:32:20,671   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/sequencesMatrix.cpp -o build/temp.linux-armv7l-cpython-39/sequencesMatrix.o
2022-06-06T20:32:25,540   generating build/temp.linux-armv7l-cpython-39/similarityMatrix.o from build/temp.linux-armv7l-cpython-39/similarityMatrix.cpp
2022-06-06T20:32:25,541   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/similarityMatrix.cpp -o build/temp.linux-armv7l-cpython-39/similarityMatrix.o
2022-06-06T20:32:30,822   generating build/temp.linux-armv7l-cpython-39/Mold.o from build/temp.linux-armv7l-cpython-39/Mold.cpp
2022-06-06T20:32:30,824   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Mold.cpp -o build/temp.linux-armv7l-cpython-39/Mold.o
2022-06-06T20:32:38,826   generating build/temp.linux-armv7l-cpython-39/Gaps.o from build/temp.linux-armv7l-cpython-39/Gaps.cpp
2022-06-06T20:32:38,828   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Gaps.cpp -o build/temp.linux-armv7l-cpython-39/Gaps.o
2022-06-06T20:32:47,412   generating build/temp.linux-armv7l-cpython-39/Manager.o from build/temp.linux-armv7l-cpython-39/Manager.cpp
2022-06-06T20:32:47,413   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Manager.cpp -o build/temp.linux-armv7l-cpython-39/Manager.o
2022-06-06T20:32:51,002   build/temp.linux-armv7l-cpython-39/Manager.cpp: In destructor ‘statistics::Manager::~Manager()’:
2022-06-06T20:32:51,002   build/temp.linux-armv7l-cpython-39/Manager.cpp:219:9: warning: deleting object of polymorphic class type ‘statistics::Similarity’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
2022-06-06T20:32:51,003     219 |         delete similarity;
2022-06-06T20:32:51,003         |         ^~~~~~~~~~~~~~~~~
2022-06-06T20:32:51,858   generating build/temp.linux-armv7l-cpython-39/Similarity.o from build/temp.linux-armv7l-cpython-39/Similarity.cpp
2022-06-06T20:32:51,859   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Similarity.cpp -o build/temp.linux-armv7l-cpython-39/Similarity.o
2022-06-06T20:32:52,671   build/temp.linux-armv7l-cpython-39/Similarity.cpp:115: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:32:52,671     115 |         #pragma omp parallel for num_threads(NUMTHREADS) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-06-06T20:32:52,672         |
2022-06-06T20:32:52,672   build/temp.linux-armv7l-cpython-39/Similarity.cpp:124: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-06-06T20:32:52,673     124 |         #pragma omp parallel for num_threads(NUMTHREADS) private(j, k, sum, length) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-06-06T20:32:52,673         |
2022-06-06T20:33:00,832   generating build/temp.linux-armv7l-cpython-39/Consistency.o from build/temp.linux-armv7l-cpython-39/Consistency.cpp
2022-06-06T20:33:00,833   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Consistency.cpp -o build/temp.linux-armv7l-cpython-39/Consistency.o
2022-06-06T20:33:13,233   generating build/temp.linux-armv7l-cpython-39/errorMessages.o from build/temp.linux-armv7l-cpython-39/errorMessages.cpp
2022-06-06T20:33:13,235   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/errorMessages.cpp -o build/temp.linux-armv7l-cpython-39/errorMessages.o
2022-06-06T20:33:17,966   generating build/temp.linux-armv7l-cpython-39/infoMessages.o from build/temp.linux-armv7l-cpython-39/infoMessages.cpp
2022-06-06T20:33:17,967   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/infoMessages.cpp -o build/temp.linux-armv7l-cpython-39/infoMessages.o
2022-06-06T20:33:21,880   generating build/temp.linux-armv7l-cpython-39/warningMessages.o from build/temp.linux-armv7l-cpython-39/warningMessages.cpp
2022-06-06T20:33:21,881   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/warningMessages.cpp -o build/temp.linux-armv7l-cpython-39/warningMessages.o
2022-06-06T20:33:25,822   generating build/temp.linux-armv7l-cpython-39/nexus_m10_state.o from build/temp.linux-armv7l-cpython-39/nexus_m10_state.cpp
2022-06-06T20:33:25,822   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/nexus_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/nexus_m10_state.o
2022-06-06T20:33:32,432   generating build/temp.linux-armv7l-cpython-39/mega_sequential_state.o from build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp
2022-06-06T20:33:32,432   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp -o build/temp.linux-armv7l-cpython-39/mega_sequential_state.o
2022-06-06T20:33:36,164   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp: In member function ‘virtual bool FormatHandling::mega_sequential_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-06-06T20:33:36,164   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp:335:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:33:36,165     335 |             for(j = 0, l = 0; j < alignment.sequences[i].length(); j ++)
2022-06-06T20:33:36,165         |                               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:33:36,172   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp:289:15: warning: unused variable ‘k’ [-Wunused-variable]
2022-06-06T20:33:36,173     289 |     int i, j, k, l, m;
2022-06-06T20:33:36,173         |               ^
2022-06-06T20:33:36,174   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp:289:21: warning: unused variable ‘m’ [-Wunused-variable]
2022-06-06T20:33:36,174     289 |     int i, j, k, l, m;
2022-06-06T20:33:36,174         |                     ^
2022-06-06T20:33:38,556   generating build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o from build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.cpp
2022-06-06T20:33:38,559   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o
2022-06-06T20:33:43,701   generating build/temp.linux-armv7l-cpython-39/phylip32_state.o from build/temp.linux-armv7l-cpython-39/phylip32_state.cpp
2022-06-06T20:33:43,702   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip32_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip32_state.o
2022-06-06T20:33:49,774   generating build/temp.linux-armv7l-cpython-39/nexus_state.o from build/temp.linux-armv7l-cpython-39/nexus_state.cpp
2022-06-06T20:33:49,776   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/nexus_state.cpp -o build/temp.linux-armv7l-cpython-39/nexus_state.o
2022-06-06T20:33:56,916   generating build/temp.linux-armv7l-cpython-39/fasta_state.o from build/temp.linux-armv7l-cpython-39/fasta_state.cpp
2022-06-06T20:33:56,917   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/fasta_state.cpp -o build/temp.linux-armv7l-cpython-39/fasta_state.o
2022-06-06T20:34:00,602   build/temp.linux-armv7l-cpython-39/fasta_state.cpp: In member function ‘virtual bool FormatHandling::fasta_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-06-06T20:34:00,603   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:197:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:00,603     197 |         for (j = 0, k = 0; j < alignment.sequences[i].length(); j++)
2022-06-06T20:34:00,603         |                            ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:00,604   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:201:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:00,604     201 |                 if (!lastcharIsnewline && j == alignment.sequences[i].length() -1 )
2022-06-06T20:34:00,605         |                                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:00,606   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:212:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:00,607     212 |                 if (k % 60 == 0 || j == alignment.sequences[i].length() -1 )
2022-06-06T20:34:00,607         |                                    ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:02,613   generating build/temp.linux-armv7l-cpython-39/phylip_paml_state.o from build/temp.linux-armv7l-cpython-39/phylip_paml_state.cpp
2022-06-06T20:34:02,614   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip_paml_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip_paml_state.o
2022-06-06T20:34:07,721   generating build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o from build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp
2022-06-06T20:34:07,723   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o
2022-06-06T20:34:12,280   build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp: In member function ‘virtual bool FormatHandling::phylip40_m10_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-06-06T20:34:12,280   build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp:104:19: warning: ‘k’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-06-06T20:34:12,281     104 |     for (i = k; i < alignment.originalNumberOfResidues; i=k)
2022-06-06T20:34:12,281         |                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:13,007   generating build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o from build/temp.linux-armv7l-cpython-39/mega_interleaved_state.cpp
2022-06-06T20:34:13,008   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/mega_interleaved_state.cpp -o build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o
2022-06-06T20:34:18,630   generating build/temp.linux-armv7l-cpython-39/clustal_state.o from build/temp.linux-armv7l-cpython-39/clustal_state.cpp
2022-06-06T20:34:18,632   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/clustal_state.cpp -o build/temp.linux-armv7l-cpython-39/clustal_state.o
2022-06-06T20:34:24,557   generating build/temp.linux-armv7l-cpython-39/phylip40_state.o from build/temp.linux-armv7l-cpython-39/phylip40_state.cpp
2022-06-06T20:34:24,559   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip40_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip40_state.o
2022-06-06T20:34:30,631   generating build/temp.linux-armv7l-cpython-39/pir_state.o from build/temp.linux-armv7l-cpython-39/pir_state.cpp
2022-06-06T20:34:30,633   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/pir_state.cpp -o build/temp.linux-armv7l-cpython-39/pir_state.o
2022-06-06T20:34:34,368   build/temp.linux-armv7l-cpython-39/pir_state.cpp: In member function ‘virtual bool FormatHandling::pir_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-06-06T20:34:34,369   build/temp.linux-armv7l-cpython-39/pir_state.cpp:223:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:34,369     223 |         for (j = 0, k = 0, l = 0; j < alignment.sequences[i].length(); j++) {
2022-06-06T20:34:34,370         |                                   ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:34,374   build/temp.linux-armv7l-cpython-39/pir_state.cpp:231:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:34,374     231 |                 if (j == alignment.sequences[i].length() - 1);
2022-06-06T20:34:34,375         |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:34,379   build/temp.linux-armv7l-cpython-39/pir_state.cpp:184:18: warning: variable ‘l’ set but not used [-Wunused-but-set-variable]
2022-06-06T20:34:34,380     184 |     int i, j, k, l;
2022-06-06T20:34:34,380         |                  ^
2022-06-06T20:34:36,414   generating build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o from build/temp.linux-armv7l-cpython-39/phylip32_m10_state.cpp
2022-06-06T20:34:36,416   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip32_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o
2022-06-06T20:34:41,690   generating build/temp.linux-armv7l-cpython-39/fasta_m10_state.o from build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp
2022-06-06T20:34:41,693   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/fasta_m10_state.o
2022-06-06T20:34:45,412   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp: In member function ‘virtual bool FormatHandling::fasta_m10_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-06-06T20:34:45,412   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp:95:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:45,413      95 |         for (j = 0, k = 0; j < alignment.sequences[i].length(); j++)
2022-06-06T20:34:45,413         |                            ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:45,413   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp:99:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:45,414      99 |                 if (!lastcharIsnewline && j == alignment.sequences[i].length() -1 )
2022-06-06T20:34:45,414         |                                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:45,416   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp:110:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:34:45,416     110 |                 if ((k % 60 == 0 || j == alignment.sequences[i].length() - 1))
2022-06-06T20:34:45,417         |                                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:34:47,001   generating build/temp.linux-armv7l-cpython-39/htmlreport_state.o from build/temp.linux-armv7l-cpython-39/htmlreport_state.cpp
2022-06-06T20:34:47,002   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/htmlreport_state.cpp -o build/temp.linux-armv7l-cpython-39/htmlreport_state.o
2022-06-06T20:34:52,152   generating build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o from build/temp.linux-armv7l-cpython-39/BaseFormatHandler.cpp
2022-06-06T20:34:52,154   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/BaseFormatHandler.cpp -o build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o
2022-06-06T20:35:04,234   generating build/temp.linux-armv7l-cpython-39/utils.o from build/temp.linux-armv7l-cpython-39/utils.cpp
2022-06-06T20:35:04,235   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/utils.cpp -o build/temp.linux-armv7l-cpython-39/utils.o
2022-06-06T20:35:07,375   build/temp.linux-armv7l-cpython-39/utils.cpp: In function ‘std::string utils::removeCharacter(char, std::string)’:
2022-06-06T20:35:07,376   build/temp.linux-armv7l-cpython-39/utils.cpp:490:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:35:07,376     490 |         while (pos != (int) std::string::npos) {
2022-06-06T20:35:07,376         |                ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:07,399   build/temp.linux-armv7l-cpython-39/utils.cpp: In function ‘int* utils::readNumbers(const string&)’:
2022-06-06T20:35:07,399   build/temp.linux-armv7l-cpython-39/utils.cpp:632:52: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:35:07,400     632 |         while ((comma = line.find(',', comma + 1)) != (int) std::string::npos)
2022-06-06T20:35:07,400         |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:07,402   build/temp.linux-armv7l-cpython-39/utils.cpp:646:44: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:35:07,402     646 |             if (((separ < comma) || (comma == (int) std::string::npos)) && (separ != (int) std::string::npos)) {
2022-06-06T20:35:07,403         |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:07,403   build/temp.linux-armv7l-cpython-39/utils.cpp:646:83: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:35:07,404     646 |             if (((separ < comma) || (comma == (int) std::string::npos)) && (separ != (int) std::string::npos)) {
2022-06-06T20:35:07,404         |                                                                             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:07,406   build/temp.linux-armv7l-cpython-39/utils.cpp:650:50: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:35:07,406     650 |             } else if ((separ > comma) || (separ == (int) std::string::npos)) {
2022-06-06T20:35:07,407         |                                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:07,409   build/temp.linux-armv7l-cpython-39/utils.cpp:666:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-06-06T20:35:07,410     666 |             if (comma == (int) std::string::npos)
2022-06-06T20:35:07,410         |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:13,278   generating build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o from build/temp.linux-armv7l-cpython-39/InternalBenchmarker.cpp
2022-06-06T20:35:13,279   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/InternalBenchmarker.cpp -o build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o
2022-06-06T20:35:13,454   generating build/temp.linux-armv7l-cpython-39/trimalManager.o from build/temp.linux-armv7l-cpython-39/trimalManager.cpp
2022-06-06T20:35:13,456   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/trimalManager.cpp -o build/temp.linux-armv7l-cpython-39/trimalManager.o
2022-06-06T20:35:17,362   In file included from build/temp.linux-armv7l-cpython-39/trimalManager.cpp:42:
2022-06-06T20:35:17,362   build/temp.linux-armv7l-cpython-39/VCFHandler.h: In constructor ‘ngs::__internal::vcfFeature::vcfFeature()’:
2022-06-06T20:35:17,363   build/temp.linux-armv7l-cpython-39/VCFHandler.h:87:19: warning: ‘ngs::__internal::vcfFeature::quality’ will be initialized after [-Wreorder]
2022-06-06T20:35:17,363      87 |             float quality;
2022-06-06T20:35:17,363         |                   ^~~~~~~
2022-06-06T20:35:17,364   build/temp.linux-armv7l-cpython-39/VCFHandler.h:85:18: warning:   ‘bool ngs::__internal::vcfFeature::filter’ [-Wreorder]
2022-06-06T20:35:17,364      85 |             bool filter;
2022-06-06T20:35:17,365         |                  ^~~~~~
2022-06-06T20:35:17,365   build/temp.linux-armv7l-cpython-39/VCFHandler.h:96:13: warning:   when initialized here [-Wreorder]
2022-06-06T20:35:17,365      96 |             vcfFeature() : position(0), quality(0.0F), filter(false), readDepthIndex(0)
2022-06-06T20:35:17,365         |             ^~~~~~~~~~
2022-06-06T20:35:17,715   build/temp.linux-armv7l-cpython-39/trimalManager.cpp: In member function ‘bool trimAlManager::check_outputs_coincidence()’:
2022-06-06T20:35:17,716   build/temp.linux-armv7l-cpython-39/trimalManager.cpp:1419:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::array<char*, 4>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:17,716    1419 |     for (int i = 0, x = 0; i < outFiles.size(); i++) {
2022-06-06T20:35:17,716         |                            ~~^~~~~~~~~~~~~~~~~
2022-06-06T20:35:17,717   build/temp.linux-armv7l-cpython-39/trimalManager.cpp:1421:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::array<char*, 4>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:17,717    1421 |             for (x = i + 1; x < outFiles.size(); x++) {
2022-06-06T20:35:17,718         |                             ~~^~~~~~~~~~~~~~~~~
2022-06-06T20:35:17,957   build/temp.linux-armv7l-cpython-39/trimalManager.cpp: In member function ‘void trimAlManager::CleanSequences()’:
2022-06-06T20:35:17,957   build/temp.linux-armv7l-cpython-39/trimalManager.cpp:2100:9: warning: deleting object of polymorphic class type ‘statistics::Similarity’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
2022-06-06T20:35:17,958    2100 |         delete singleAlig->Statistics->similarity;
2022-06-06T20:35:17,958         |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:39,468   generating build/temp.linux-armv7l-cpython-39/VCFHandler.o from build/temp.linux-armv7l-cpython-39/VCFHandler.cpp
2022-06-06T20:35:39,469   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/VCFHandler.cpp -o build/temp.linux-armv7l-cpython-39/VCFHandler.o
2022-06-06T20:35:43,010   In file included from build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:30:
2022-06-06T20:35:43,011   build/temp.linux-armv7l-cpython-39/VCFHandler.h: In constructor ‘ngs::__internal::vcfFeature::vcfFeature()’:
2022-06-06T20:35:43,011   build/temp.linux-armv7l-cpython-39/VCFHandler.h:87:19: warning: ‘ngs::__internal::vcfFeature::quality’ will be initialized after [-Wreorder]
2022-06-06T20:35:43,011      87 |             float quality;
2022-06-06T20:35:43,012         |                   ^~~~~~~
2022-06-06T20:35:43,012   build/temp.linux-armv7l-cpython-39/VCFHandler.h:85:18: warning:   ‘bool ngs::__internal::vcfFeature::filter’ [-Wreorder]
2022-06-06T20:35:43,013      85 |             bool filter;
2022-06-06T20:35:43,013         |                  ^~~~~~
2022-06-06T20:35:43,013   build/temp.linux-armv7l-cpython-39/VCFHandler.h:96:13: warning:   when initialized here [-Wreorder]
2022-06-06T20:35:43,014      96 |             vcfFeature() : position(0), quality(0.0F), filter(false), readDepthIndex(0)
2022-06-06T20:35:43,014         |             ^~~~~~~~~~
2022-06-06T20:35:43,060   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘bool ngs::__internal::checkContigsWithReference(const AlignmentVector&, const StringVector&)’:
2022-06-06T20:35:43,060   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:153:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Alignment*>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,061     153 |                 for (i = 0; i < sources.size(); i++) {
2022-06-06T20:35:43,061         |                             ~~^~~~~~~~~~~~~~~~
2022-06-06T20:35:43,062   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:162:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Alignment*>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,062     162 |                 if (i == sources.size()) {
2022-06-06T20:35:43,062         |                     ~~^~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,075   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::increaseSequencesInAlignment(const AlignmentVector&, const StringVector&)’:
2022-06-06T20:35:43,076   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:198:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,076     198 |                 for (int i = 1; i < donors.size() + 1; i++) {
2022-06-06T20:35:43,077         |                                 ~~^~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,090   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::applyVariantCallingFiles(const AlignmentVector&, const StringVector&, const StringVector&, const std::vector<std::vector<int> >&, float, float, bool, const char*)’:
2022-06-06T20:35:43,091   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:337:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,091     337 |             for (int vcfIndex = 0; vcfIndex < filenames.size(); vcfIndex++) {
2022-06-06T20:35:43,092         |                                    ~~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,092   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:360:59: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,093     360 |                         for (contigIndex = 0; contigIndex < contigs.size(); contigIndex++)
2022-06-06T20:35:43,093         |                                               ~~~~~~~~~~~~^~~~~~~~~~~~~~~~
2022-06-06T20:35:43,094   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:365:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,094     365 |                         if (contigIndex == contigs.size()) {
2022-06-06T20:35:43,095         |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,099   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:394:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,099     394 |                     for (int donorID = 0; donorID < feature.donorsInfo.size(); donorID++)
2022-06-06T20:35:43,099         |                                           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,146   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:397:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,147     397 |                         if (donorID >= donorsPositions[vcfIndex].size())
2022-06-06T20:35:43,147         |                             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,171   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::extractContigsFromLine(char*, ngs::StringVector&)’:
2022-06-06T20:35:43,171   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:528:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,172     528 |                 for (U = 0; U < contigs.size(); U++)
2022-06-06T20:35:43,172         |                             ~~^~~~~~~~~~~~~~~~
2022-06-06T20:35:43,173   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:533:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,173     533 |                 if (U == contigs.size())
2022-06-06T20:35:43,173         |                     ~~^~~~~~~~~~~~~~~~~
2022-06-06T20:35:43,175   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::extractDonorsFromLine(char*, std::vector<int>&, ngs::StringVector&)’:
2022-06-06T20:35:43,175   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:557:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,176     557 |                 for (U = 0; U < donors.size(); U++) {
2022-06-06T20:35:43,176         |                             ~~^~~~~~~~~~~~~~~
2022-06-06T20:35:43,176   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:564:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,177     564 |                 if (U == donors.size()) {
2022-06-06T20:35:43,177         |                     ~~^~~~~~~~~~~~~~~~
2022-06-06T20:35:43,179   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::obtainContigsAndDonors(const StringVector&, ngs::StringVector&, ngs::StringVector&, std::vector<std::vector<int> >&)’:
2022-06-06T20:35:43,179   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:591:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-06T20:35:43,180     591 |             for (int C = 0; C < filenames.size(); C++) {
2022-06-06T20:35:43,180         |                             ~~^~~~~~~~~~~~~~~~~~
2022-06-06T20:35:51,578   generating build/temp.linux-armv7l-cpython-39/libtrimal.a from build/temp.linux-armv7l-cpython-39/Cleaner.o, build/temp.linux-armv7l-cpython-39/Alignment.o, build/temp.linux-armv7l-cpython-39/sequencesMatrix.o, build/temp.linux-armv7l-cpython-39/similarityMatrix.o, build/temp.linux-armv7l-cpython-39/Mold.o, build/temp.linux-armv7l-cpython-39/Gaps.o, build/temp.linux-armv7l-cpython-39/Manager.o, build/temp.linux-armv7l-cpython-39/Similarity.o, build/temp.linux-armv7l-cpython-39/Consistency.o, build/temp.linux-armv7l-cpython-39/errorMessages.o, build/temp.linux-armv7l-cpython-39/infoMessages.o, build/temp.linux-armv7l-cpython-39/warningMessages.o, build/temp.linux-armv7l-cpython-39/nexus_m10_state.o, build/temp.linux-armv7l-cpython-39/mega_sequential_state.o, build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o, build/temp.linux-armv7l-cpython-39/phylip32_state.o, build/temp.linux-armv7l-cpython-39/nexus_state.o, build/temp.linux-armv7l-cpython-39/fasta_state.o, build/temp.linux-armv7l-cpython-39/phylip_paml_state.o, build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o, build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o, build/temp.linux-armv7l-cpython-39/clustal_state.o, build/temp.linux-armv7l-cpython-39/phylip40_state.o, build/temp.linux-armv7l-cpython-39/pir_state.o, build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o, build/temp.linux-armv7l-cpython-39/fasta_m10_state.o, build/temp.linux-armv7l-cpython-39/htmlreport_state.o, build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o, build/temp.linux-armv7l-cpython-39/utils.o, build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o, build/temp.linux-armv7l-cpython-39/trimalManager.o, build/temp.linux-armv7l-cpython-39/VCFHandler.o
2022-06-06T20:35:51,580   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libtrimal.a build/temp.linux-armv7l-cpython-39/Cleaner.o build/temp.linux-armv7l-cpython-39/Alignment.o build/temp.linux-armv7l-cpython-39/sequencesMatrix.o build/temp.linux-armv7l-cpython-39/similarityMatrix.o build/temp.linux-armv7l-cpython-39/Mold.o build/temp.linux-armv7l-cpython-39/Gaps.o build/temp.linux-armv7l-cpython-39/Manager.o build/temp.linux-armv7l-cpython-39/Similarity.o build/temp.linux-armv7l-cpython-39/Consistency.o build/temp.linux-armv7l-cpython-39/errorMessages.o build/temp.linux-armv7l-cpython-39/infoMessages.o build/temp.linux-armv7l-cpython-39/warningMessages.o build/temp.linux-armv7l-cpython-39/nexus_m10_state.o build/temp.linux-armv7l-cpython-39/mega_sequential_state.o build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o build/temp.linux-armv7l-cpython-39/phylip32_state.o build/temp.linux-armv7l-cpython-39/nexus_state.o build/temp.linux-armv7l-cpython-39/fasta_state.o build/temp.linux-armv7l-cpython-39/phylip_paml_state.o build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o build/temp.linux-armv7l-cpython-39/clustal_state.o build/temp.linux-armv7l-cpython-39/phylip40_state.o build/temp.linux-armv7l-cpython-39/pir_state.o build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o build/temp.linux-armv7l-cpython-39/fasta_m10_state.o build/temp.linux-armv7l-cpython-39/htmlreport_state.o build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o build/temp.linux-armv7l-cpython-39/utils.o build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o build/temp.linux-armv7l-cpython-39/trimalManager.o build/temp.linux-armv7l-cpython-39/VCFHandler.o
2022-06-06T20:35:52,211   running build_ext
2022-06-06T20:36:00,585   Compiling pytrimal/_trimal.pyx because it changed.
2022-06-06T20:36:00,586   [1/1] Cythonizing pytrimal/_trimal.pyx
2022-06-06T20:36:00,586   building pytrimal._trimal with unix compiler
2022-06-06T20:36:00,588   building 'pytrimal._trimal' extension
2022-06-06T20:36:00,588   creating build/temp.linux-armv7l-cpython-39/pytrimal
2022-06-06T20:36:00,590   creating build/temp.linux-armv7l-cpython-39/pytrimal/patch
2022-06-06T20:36:00,592   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/_trimal.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/_trimal.o -std=c++11
2022-06-06T20:36:43,672   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/patch/reportsystem.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/patch/reportsystem.o -std=c++11
2022-06-06T20:36:50,895   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pytrimal/_trimal.o build/temp.linux-armv7l-cpython-39/pytrimal/patch/reportsystem.o build/temp.linux-armv7l-cpython-39/libcpu_features.a build/temp.linux-armv7l-cpython-39/libtrimal.a -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -lcpu_features -ltrimal -lcpu_features -ltrimal -o build/lib.linux-armv7l-cpython-39/pytrimal/_trimal.cpython-39-arm-linux-gnueabihf.so -Wno-alloc-size-larger-than
2022-06-06T20:36:54,768   installing to build/bdist.linux-armv7l/wheel
2022-06-06T20:36:54,769   running install
2022-06-06T20:36:54,835   running install_lib
2022-06-06T20:36:55,440   creating build/bdist.linux-armv7l
2022-06-06T20:36:55,441   creating build/bdist.linux-armv7l/wheel
2022-06-06T20:36:55,444   creating build/bdist.linux-armv7l/wheel/pytrimal
2022-06-06T20:36:55,445   copying build/lib.linux-armv7l-cpython-39/pytrimal/_trimal.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pytrimal
2022-06-06T20:36:55,826   copying build/lib.linux-armv7l-cpython-39/pytrimal/_trimal.pyi -> build/bdist.linux-armv7l/wheel/pytrimal
2022-06-06T20:36:55,831   copying build/lib.linux-armv7l-cpython-39/pytrimal/__init__.py -> build/bdist.linux-armv7l/wheel/pytrimal
2022-06-06T20:36:55,834   copying build/lib.linux-armv7l-cpython-39/pytrimal/_version.py -> build/bdist.linux-armv7l/wheel/pytrimal
2022-06-06T20:36:55,838   copying build/lib.linux-armv7l-cpython-39/pytrimal/py.typed -> build/bdist.linux-armv7l/wheel/pytrimal
2022-06-06T20:36:55,843   creating build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:55,846   creating build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,848   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.cons40.gt40.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,863   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/halorhodopsin.afa -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,874   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/example.001.AA.clw -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,877   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.id50.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,882   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.strict.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,893   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.strictplus.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,904   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/pam70.json -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,907   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/__init__.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,910   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.gappyout.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,923   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.automated1.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,937   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.noallgaps.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,953   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,971   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.id70.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,980   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.cons60.gt90.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-06-06T20:36:55,994   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_alignment.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:55,998   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_similarity_matrix.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,002   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_automatic_trimmer.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,006   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_manual_trimmer.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,010   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,014   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/requirements.txt -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,018   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_doctest.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,022   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/__main__.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-06-06T20:36:56,025   running install_egg_info
2022-06-06T20:36:57,253   running egg_info
2022-06-06T20:36:57,853   writing pytrimal.egg-info/PKG-INFO
2022-06-06T20:36:58,425   writing dependency_links to pytrimal.egg-info/dependency_links.txt
2022-06-06T20:37:01,832   writing top-level names to pytrimal.egg-info/top_level.txt
2022-06-06T20:37:01,902   reading manifest file 'pytrimal.egg-info/SOURCES.txt'
2022-06-06T20:37:01,977   reading manifest template 'MANIFEST.in'
2022-06-06T20:37:02,888   warning: no previously-included files matching '*.html' found under directory 'pytrimal'
2022-06-06T20:37:02,895   warning: no files found matching '*.pxd' under directory 'pytrimal/patch'
2022-06-06T20:37:02,896   adding license file 'COPYING'
2022-06-06T20:37:02,937   writing manifest file 'pytrimal.egg-info/SOURCES.txt'
2022-06-06T20:37:02,941   Copying pytrimal.egg-info to build/bdist.linux-armv7l/wheel/pytrimal-0.2.0-py3.9.egg-info
2022-06-06T20:37:02,962   running install_scripts
2022-06-06T20:37:03,092   adding license file "COPYING" (matched pattern "COPYING*")
2022-06-06T20:37:03,147   creating build/bdist.linux-armv7l/wheel/pytrimal-0.2.0.dist-info/WHEEL
2022-06-06T20:37:03,152   creating '/tmp/pip-wheel-gts2gdz6/tmpb2bcm4nm/pytrimal-0.2.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-06-06T20:37:03,156   adding 'pytrimal/__init__.py'
2022-06-06T20:37:06,558   adding 'pytrimal/_trimal.cpython-39-arm-linux-gnueabihf.so'
2022-06-06T20:37:06,710   adding 'pytrimal/_trimal.pyi'
2022-06-06T20:37:06,712   adding 'pytrimal/_version.py'
2022-06-06T20:37:06,714   adding 'pytrimal/py.typed'
2022-06-06T20:37:06,718   adding 'pytrimal/tests/__init__.py'
2022-06-06T20:37:06,720   adding 'pytrimal/tests/__main__.py'
2022-06-06T20:37:06,722   adding 'pytrimal/tests/requirements.txt'
2022-06-06T20:37:06,725   adding 'pytrimal/tests/test_alignment.py'
2022-06-06T20:37:06,727   adding 'pytrimal/tests/test_automatic_trimmer.py'
2022-06-06T20:37:06,730   adding 'pytrimal/tests/test_doctest.py'
2022-06-06T20:37:06,733   adding 'pytrimal/tests/test_manual_trimmer.py'
2022-06-06T20:37:06,735   adding 'pytrimal/tests/test_similarity_matrix.py'
2022-06-06T20:37:06,765   adding 'pytrimal/tests/data/ENOG411BWBU.automated1.fasta'
2022-06-06T20:37:06,798   adding 'pytrimal/tests/data/ENOG411BWBU.cons40.gt40.fasta'
2022-06-06T20:37:06,827   adding 'pytrimal/tests/data/ENOG411BWBU.cons60.gt90.fasta'
2022-06-06T20:37:06,865   adding 'pytrimal/tests/data/ENOG411BWBU.fasta'
2022-06-06T20:37:06,898   adding 'pytrimal/tests/data/ENOG411BWBU.gappyout.fasta'
2022-06-06T20:37:06,906   adding 'pytrimal/tests/data/ENOG411BWBU.id50.fasta'
2022-06-06T20:37:06,920   adding 'pytrimal/tests/data/ENOG411BWBU.id70.fasta'
2022-06-06T20:37:06,956   adding 'pytrimal/tests/data/ENOG411BWBU.noallgaps.fasta'
2022-06-06T20:37:06,983   adding 'pytrimal/tests/data/ENOG411BWBU.strict.fasta'
2022-06-06T20:37:07,005   adding 'pytrimal/tests/data/ENOG411BWBU.strictplus.fasta'
2022-06-06T20:37:07,010   adding 'pytrimal/tests/data/__init__.py'
2022-06-06T20:37:07,012   adding 'pytrimal/tests/data/example.001.AA.clw'
2022-06-06T20:37:07,028   adding 'pytrimal/tests/data/halorhodopsin.afa'
2022-06-06T20:37:07,034   adding 'pytrimal/tests/data/pam70.json'
2022-06-06T20:37:07,050   adding 'pytrimal-0.2.0.dist-info/COPYING'
2022-06-06T20:37:07,055   adding 'pytrimal-0.2.0.dist-info/METADATA'
2022-06-06T20:37:07,057   adding 'pytrimal-0.2.0.dist-info/WHEEL'
2022-06-06T20:37:07,058   adding 'pytrimal-0.2.0.dist-info/top_level.txt'
2022-06-06T20:37:07,060   adding 'pytrimal-0.2.0.dist-info/RECORD'
2022-06-06T20:37:07,179   removing build/bdist.linux-armv7l/wheel
2022-06-06T20:37:07,764   Building wheel for pytrimal (pyproject.toml): finished with status 'done'
2022-06-06T20:37:07,925   Created wheel for pytrimal: filename=pytrimal-0.2.0-cp39-cp39-linux_armv7l.whl size=2844392 sha256=f5b150f17ead1887b6682721c33fa5cd7a8ab0d03d55d68176e11f3d0e17db43
2022-06-06T20:37:07,927   Stored in directory: /tmp/pip-ephem-wheel-cache-7ckfp62v/wheels/d7/cc/2f/24b545e9078acbcbc9666467a9c3be39ffd562865fcb23bd74
2022-06-06T20:37:07,958 Successfully built pytrimal
2022-06-06T20:37:08,150 Removed build tracker: '/tmp/pip-build-tracker-0td91mns'