2022-06-07T02:38:38,526 Created temporary directory: /tmp/pip-ephem-wheel-cache-80rqvy_s 2022-06-07T02:38:38,531 Created temporary directory: /tmp/pip-build-tracker-s4hrkpjb 2022-06-07T02:38:38,532 Initialized build tracking at /tmp/pip-build-tracker-s4hrkpjb 2022-06-07T02:38:38,532 Created build tracker: /tmp/pip-build-tracker-s4hrkpjb 2022-06-07T02:38:38,533 Entered build tracker: /tmp/pip-build-tracker-s4hrkpjb 2022-06-07T02:38:38,534 Created temporary directory: /tmp/pip-wheel-l6i95nxu 2022-06-07T02:38:38,606 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-07T02:38:38,615 2 location(s) to search for versions of transmute-common: 2022-06-07T02:38:38,615 * https://pypi.org/simple/transmute-common/ 2022-06-07T02:38:38,615 * https://www.piwheels.org/simple/transmute-common/ 2022-06-07T02:38:38,616 Fetching project page and analyzing links: https://pypi.org/simple/transmute-common/ 2022-06-07T02:38:38,618 Getting page https://pypi.org/simple/transmute-common/ 2022-06-07T02:38:38,621 Found index url https://pypi.org/simple 2022-06-07T02:38:38,740 Found link https://files.pythonhosted.org/packages/1d/70/99612fc27670efa69aadd5cdd5f3741bb1dcd39f158dd31cfc57995f4a09/transmute-common-0.0.3.tar.gz#sha256=fe901db8c5611dab731ffe6cd4c300152290aec5a5174ef615733a5fd3632593 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.6), version: 0.0.3 2022-06-07T02:38:38,741 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/ab/63/0a569f6651bdd0b2fe0301f591facf5c87de5b2ae1f05228c0a22ff029b6/transmute_common-0.0.3-py3-none-any.whl#sha256=519cd460147730041ebc6d01dca8ffaa7bae7b406c25336b1a52080f79ca5fe8 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.6) 2022-06-07T02:38:38,743 Found link https://files.pythonhosted.org/packages/f9/73/80b2be1d937c08259ce709a159f61ac32574a5952d5bb9ba738a142ae1cd/transmute-common-0.0.4.tar.gz#sha256=198c7600d6c0794830832c977253b77a19255765af16a53e183476f1a1cc759b (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8), version: 0.0.4 2022-06-07T02:38:38,743 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/fd/05/1fb00f40a2f0d18e688ba6553559eb2e682295f542fa372daa6c52e71552/transmute_common-0.0.4-py3-none-any.whl#sha256=74680b0d1f7eb11e5e0f83520ce5b6c5ffe88cdc1091cc9affeb357c1a584ea5 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-07T02:38:38,745 Found link https://files.pythonhosted.org/packages/62/fa/35c9c7f3f60989d2dd8f045a0049fa7fb6fb01e8e60476daec04aeaf5c9a/transmute-common-0.0.5.tar.gz#sha256=7b773d4193f8ebc34c1a945d84c4815975bd4a91323ad41f185adf68d8781e03 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8), version: 0.0.5 2022-06-07T02:38:38,745 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/48/18/bb330010a95b80002769bc64c7989f81cc62996ec5bed1c47f86eab21cd7/transmute_common-0.0.5-py3-none-any.whl#sha256=d5704ff6b4c045f8e1e29ffac5f166b6e4e57909a441f4776e8ee6aab3f27cb1 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-07T02:38:38,747 Found link https://files.pythonhosted.org/packages/c6/de/356dd4257a9a566a7eeead95cc399dfe7e8899cb4ab82ca430720aee1eda/transmute-common-0.0.6.tar.gz#sha256=ad265196fcfd6d7583ebedc6bf0552b34ce485c75f02b1a3d343e10cc9b35774 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8), version: 0.0.6 2022-06-07T02:38:38,748 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/00/5b/4774fbbdc9906587d78f52a57d1f60e21a259edc1f030898cfd8ebcd1bda/transmute_common-0.0.6-py3-none-any.whl#sha256=16752e6d85408eb5b63a254df60c96cd9c4ea0fcbb16388e1115959f36a3e42b (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-07T02:38:38,748 Fetching project page and analyzing links: https://www.piwheels.org/simple/transmute-common/ 2022-06-07T02:38:38,749 Getting page https://www.piwheels.org/simple/transmute-common/ 2022-06-07T02:38:38,751 Found index url https://www.piwheels.org/simple 2022-06-07T02:38:38,996 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.4-py3-none-any.whl#sha256=bc6757e392c385266ac375ff951de2d897562033c5fb0d7a7db5430026e87c6f (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-07T02:38:38,997 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.3-py3-none-any.whl#sha256=85355ad4b0e4f459b84352bb3726524aed03a07c978019b58a36ba0428ba723a (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.6) 2022-06-07T02:38:38,997 Skipping link: not a file: https://www.piwheels.org/simple/transmute-common/ 2022-06-07T02:38:38,998 Skipping link: not a file: https://pypi.org/simple/transmute-common/ 2022-06-07T02:38:39,044 Given no hashes to check 1 links for project 'transmute-common': discarding no candidates 2022-06-07T02:38:39,086 Collecting transmute-common==0.0.5 2022-06-07T02:38:39,091 Created temporary directory: /tmp/pip-unpack-nb546not 2022-06-07T02:38:39,330 Downloading transmute-common-0.0.5.tar.gz (15 kB) 2022-06-07T02:38:39,453 Added transmute-common==0.0.5 from https://files.pythonhosted.org/packages/62/fa/35c9c7f3f60989d2dd8f045a0049fa7fb6fb01e8e60476daec04aeaf5c9a/transmute-common-0.0.5.tar.gz#sha256=7b773d4193f8ebc34c1a945d84c4815975bd4a91323ad41f185adf68d8781e03 to build tracker '/tmp/pip-build-tracker-s4hrkpjb' 2022-06-07T02:38:39,463 Created temporary directory: /tmp/pip-build-env-r08fui_y 2022-06-07T02:38:39,485 Created temporary directory: /tmp/pip-standalone-pip-8lc1gw1n 2022-06-07T02:38:41,797 Installing build dependencies: started 2022-06-07T02:38:41,800 Running command pip subprocess to install build dependencies 2022-06-07T02:38:53,006 Using pip 22.1.2 from /tmp/pip-standalone-pip-8lc1gw1n/__env_pip__.zip/pip (python 3.9) 2022-06-07T02:38:54,458 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-07T02:38:58,245 Collecting setuptools>=54 2022-06-07T02:38:58,556 Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.3.2-py3-none-any.whl (1.2 MB) 2022-06-07T02:38:59,227 Collecting wheel 2022-06-07T02:38:59,280 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-06-07T02:39:03,327 Installing collected packages: wheel, setuptools 2022-06-07T02:39:03,617 Creating /tmp/pip-build-env-r08fui_y/overlay/bin 2022-06-07T02:39:03,622 changing mode of /tmp/pip-build-env-r08fui_y/overlay/bin/wheel to 755 2022-06-07T02:39:08,949 Successfully installed setuptools-62.3.2 wheel-0.37.1 2022-06-07T02:39:09,618 Installing build dependencies: finished with status 'done' 2022-06-07T02:39:09,645 Getting requirements to build wheel: started 2022-06-07T02:39:09,647 Running command Getting requirements to build wheel 2022-06-07T02:39:15,031 running egg_info 2022-06-07T02:39:15,620 writing transmute_common.egg-info/PKG-INFO 2022-06-07T02:39:16,175 writing dependency_links to transmute_common.egg-info/dependency_links.txt 2022-06-07T02:39:19,486 writing top-level names to transmute_common.egg-info/top_level.txt 2022-06-07T02:39:20,159 reading manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:20,164 adding license file 'LICENSE' 2022-06-07T02:39:20,170 writing manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:20,374 Getting requirements to build wheel: finished with status 'done' 2022-06-07T02:39:20,395 Created temporary directory: /tmp/pip-modern-metadata-f7n1u09z 2022-06-07T02:39:20,401 Preparing metadata (pyproject.toml): started 2022-06-07T02:39:20,403 Running command Preparing metadata (pyproject.toml) 2022-06-07T02:39:25,670 running dist_info 2022-06-07T02:39:26,288 creating /tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info 2022-06-07T02:39:26,879 writing /tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info/PKG-INFO 2022-06-07T02:39:27,436 writing dependency_links to /tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info/dependency_links.txt 2022-06-07T02:39:30,772 writing top-level names to /tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info/top_level.txt 2022-06-07T02:39:30,775 writing manifest file '/tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:31,445 reading manifest file '/tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:31,449 adding license file 'LICENSE' 2022-06-07T02:39:31,455 writing manifest file '/tmp/pip-modern-metadata-f7n1u09z/transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:31,458 creating '/tmp/pip-modern-metadata-f7n1u09z/transmute_common-0.0.5.dist-info' 2022-06-07T02:39:31,657 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-07T02:39:31,880 Preparing metadata (pyproject.toml): finished with status 'done' 2022-06-07T02:39:31,894 Source in /tmp/pip-wheel-l6i95nxu/transmute-common_3fc60a22895846958561d6f5ba875579 has version 0.0.5, which satisfies requirement transmute-common==0.0.5 from https://files.pythonhosted.org/packages/62/fa/35c9c7f3f60989d2dd8f045a0049fa7fb6fb01e8e60476daec04aeaf5c9a/transmute-common-0.0.5.tar.gz#sha256=7b773d4193f8ebc34c1a945d84c4815975bd4a91323ad41f185adf68d8781e03 2022-06-07T02:39:31,896 Removed transmute-common==0.0.5 from https://files.pythonhosted.org/packages/62/fa/35c9c7f3f60989d2dd8f045a0049fa7fb6fb01e8e60476daec04aeaf5c9a/transmute-common-0.0.5.tar.gz#sha256=7b773d4193f8ebc34c1a945d84c4815975bd4a91323ad41f185adf68d8781e03 from build tracker '/tmp/pip-build-tracker-s4hrkpjb' 2022-06-07T02:39:31,908 Created temporary directory: /tmp/pip-unpack-m_2aw1sc 2022-06-07T02:39:31,909 Building wheels for collected packages: transmute-common 2022-06-07T02:39:31,919 Created temporary directory: /tmp/pip-wheel-9xo5s76z 2022-06-07T02:39:31,919 Destination directory: /tmp/pip-wheel-9xo5s76z 2022-06-07T02:39:31,924 Building wheel for transmute-common (pyproject.toml): started 2022-06-07T02:39:31,926 Running command Building wheel for transmute-common (pyproject.toml) 2022-06-07T02:39:36,701 running bdist_wheel 2022-06-07T02:39:37,892 running build 2022-06-07T02:39:37,892 running build_py 2022-06-07T02:39:38,479 creating build 2022-06-07T02:39:38,479 creating build/lib 2022-06-07T02:39:38,480 creating build/lib/transmute_common 2022-06-07T02:39:38,482 copying transmute_common/__init__.py -> build/lib/transmute_common 2022-06-07T02:39:38,488 creating build/lib/transmute_common/factories 2022-06-07T02:39:38,489 copying transmute_common/factories/smallVariantAnalysis.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,494 copying transmute_common/factories/cnvAnalysis.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,497 copying transmute_common/factories/ihc.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,501 copying transmute_common/factories/fusion.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,504 copying transmute_common/factories/fusionAnalysis.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,508 copying transmute_common/factories/sample.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,511 copying transmute_common/factories/__init__.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,514 copying transmute_common/factories/patient.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,517 copying transmute_common/factories/ihcAnalysis.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,521 copying transmute_common/factories/cnv.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,524 copying transmute_common/factories/svAnalysis.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,528 copying transmute_common/factories/smallVariant.py -> build/lib/transmute_common/factories 2022-06-07T02:39:38,532 copying transmute_common/factories/sv.py -> build/lib/transmute_common/factories 2022-06-07T02:39:39,710 installing to build/bdist.linux-armv7l/wheel 2022-06-07T02:39:39,711 running install 2022-06-07T02:39:39,772 running install_lib 2022-06-07T02:39:40,405 creating build/bdist.linux-armv7l 2022-06-07T02:39:40,405 creating build/bdist.linux-armv7l/wheel 2022-06-07T02:39:40,408 creating build/bdist.linux-armv7l/wheel/transmute_common 2022-06-07T02:39:40,411 creating build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,413 copying build/lib/transmute_common/factories/smallVariantAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,417 copying build/lib/transmute_common/factories/cnvAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,421 copying build/lib/transmute_common/factories/ihc.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,425 copying build/lib/transmute_common/factories/fusion.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,429 copying build/lib/transmute_common/factories/fusionAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,433 copying build/lib/transmute_common/factories/sample.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,436 copying build/lib/transmute_common/factories/__init__.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,439 copying build/lib/transmute_common/factories/patient.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,443 copying build/lib/transmute_common/factories/ihcAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,446 copying build/lib/transmute_common/factories/cnv.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,450 copying build/lib/transmute_common/factories/svAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,453 copying build/lib/transmute_common/factories/smallVariant.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,457 copying build/lib/transmute_common/factories/sv.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-07T02:39:40,460 copying build/lib/transmute_common/__init__.py -> build/bdist.linux-armv7l/wheel/transmute_common 2022-06-07T02:39:40,462 running install_egg_info 2022-06-07T02:39:41,666 running egg_info 2022-06-07T02:39:42,248 writing transmute_common.egg-info/PKG-INFO 2022-06-07T02:39:42,800 writing dependency_links to transmute_common.egg-info/dependency_links.txt 2022-06-07T02:39:46,096 writing top-level names to transmute_common.egg-info/top_level.txt 2022-06-07T02:39:46,138 reading manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:46,142 adding license file 'LICENSE' 2022-06-07T02:39:46,148 writing manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-07T02:39:46,151 Copying transmute_common.egg-info to build/bdist.linux-armv7l/wheel/transmute_common-0.0.5-py3.9.egg-info 2022-06-07T02:39:46,166 running install_scripts 2022-06-07T02:39:46,312 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-07T02:39:46,322 creating build/bdist.linux-armv7l/wheel/transmute_common-0.0.5.dist-info/WHEEL 2022-06-07T02:39:46,326 creating '/tmp/pip-wheel-9xo5s76z/tmpq2fcwgbk/transmute_common-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-06-07T02:39:46,331 adding 'transmute_common/__init__.py' 2022-06-07T02:39:46,334 adding 'transmute_common/factories/__init__.py' 2022-06-07T02:39:46,337 adding 'transmute_common/factories/cnv.py' 2022-06-07T02:39:46,339 adding 'transmute_common/factories/cnvAnalysis.py' 2022-06-07T02:39:46,341 adding 'transmute_common/factories/fusion.py' 2022-06-07T02:39:46,343 adding 'transmute_common/factories/fusionAnalysis.py' 2022-06-07T02:39:46,345 adding 'transmute_common/factories/ihc.py' 2022-06-07T02:39:46,347 adding 'transmute_common/factories/ihcAnalysis.py' 2022-06-07T02:39:46,349 adding 'transmute_common/factories/patient.py' 2022-06-07T02:39:46,352 adding 'transmute_common/factories/sample.py' 2022-06-07T02:39:46,354 adding 'transmute_common/factories/smallVariant.py' 2022-06-07T02:39:46,356 adding 'transmute_common/factories/smallVariantAnalysis.py' 2022-06-07T02:39:46,358 adding 'transmute_common/factories/sv.py' 2022-06-07T02:39:46,360 adding 'transmute_common/factories/svAnalysis.py' 2022-06-07T02:39:46,377 adding 'transmute_common-0.0.5.dist-info/LICENSE' 2022-06-07T02:39:46,380 adding 'transmute_common-0.0.5.dist-info/METADATA' 2022-06-07T02:39:46,381 adding 'transmute_common-0.0.5.dist-info/WHEEL' 2022-06-07T02:39:46,383 adding 'transmute_common-0.0.5.dist-info/top_level.txt' 2022-06-07T02:39:46,385 adding 'transmute_common-0.0.5.dist-info/RECORD' 2022-06-07T02:39:46,388 removing build/bdist.linux-armv7l/wheel 2022-06-07T02:39:46,650 Building wheel for transmute-common (pyproject.toml): finished with status 'done' 2022-06-07T02:39:46,663 Created wheel for transmute-common: filename=transmute_common-0.0.5-py3-none-any.whl size=19082 sha256=4d631442bc0008b786409eedf1933a2d41c4a682e5e80addae8604f3db1284ea 2022-06-07T02:39:46,665 Stored in directory: /tmp/pip-ephem-wheel-cache-80rqvy_s/wheels/0b/3b/3c/76678796e76ce9582b4457d5b87fcefb01cba7c1b0c2ded2fc 2022-06-07T02:39:46,688 Successfully built transmute-common 2022-06-07T02:39:46,696 Removed build tracker: '/tmp/pip-build-tracker-s4hrkpjb'