2022-06-13T10:36:30,255 Created temporary directory: /tmp/pip-ephem-wheel-cache-9yut52be 2022-06-13T10:36:30,261 Created temporary directory: /tmp/pip-req-tracker-d88wu35g 2022-06-13T10:36:30,262 Initialized build tracking at /tmp/pip-req-tracker-d88wu35g 2022-06-13T10:36:30,262 Created build tracker: /tmp/pip-req-tracker-d88wu35g 2022-06-13T10:36:30,263 Entered build tracker: /tmp/pip-req-tracker-d88wu35g 2022-06-13T10:36:30,264 Created temporary directory: /tmp/pip-wheel-lxjnondg 2022-06-13T10:36:30,335 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-13T10:36:30,338 2 location(s) to search for versions of peleffy: 2022-06-13T10:36:30,338 * https://pypi.org/simple/peleffy/ 2022-06-13T10:36:30,338 * https://www.piwheels.org/simple/peleffy/ 2022-06-13T10:36:30,339 Fetching project page and analyzing links: https://pypi.org/simple/peleffy/ 2022-06-13T10:36:30,341 Getting page https://pypi.org/simple/peleffy/ 2022-06-13T10:36:30,345 Found index url https://pypi.org/simple 2022-06-13T10:36:30,691 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/57/27/fe4ea3635dbae7397b548ec911d3541e62676b389ce0e71d985aaf10e04a/peleffy-1.0.0-py3-none-any.whl#sha256=2ab64b6bbe61be4685b18c5d3f56c8e3f421b7bac1ac200647052a84d6c16aad (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,692 Found link https://files.pythonhosted.org/packages/21/3e/8ab417b81c0fa43dc49e60e2512d2dd844f46dabce6689baa7963b8fbc15/peleffy-1.0.0.tar.gz#sha256=fe59b07a6dc9bf53afba0582885a02388928ab5f286bdf5d341d983ad762c709 (from https://pypi.org/simple/peleffy/), version: 1.0.0 2022-06-13T10:36:30,693 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/62/da/beeca76271cb160a638488343a1c35382476f1e0ed1cb04e6ab2dcfa9140/peleffy-1.1.0-py3-none-any.whl#sha256=a3df3f04ad8aa2a3186a66e5b6e43de5d1defdfed840dcb07721802a24af6990 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,694 Found link https://files.pythonhosted.org/packages/b4/41/111d2ac6171d8948df8288d96295c8f2e5d15295270d7b01c5e36a4b0d91/peleffy-1.1.0.tar.gz#sha256=96789197c26e716073ba6cfb499efa274bc397376db18e9e819338c5b7330bf6 (from https://pypi.org/simple/peleffy/), version: 1.1.0 2022-06-13T10:36:30,695 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/aa/67/51cbe4caa50d8cc3543c10801a9890e7968b4762d0277c438e7d6773a9a5/peleffy-1.2.0-py3-none-any.whl#sha256=e878b857b29bde2ff999215982041bd08680346fffc267b78cc62af8f2a8cde4 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,695 Found link https://files.pythonhosted.org/packages/77/71/cd1471fb09edfcf870fe4905b27e3fa27449c31225c45271074fa45da585/peleffy-1.2.0.tar.gz#sha256=d29d4b3ef0c74f831696fffae2353b7047073a4e2a20dbb0c0bd9d649b5f9da0 (from https://pypi.org/simple/peleffy/), version: 1.2.0 2022-06-13T10:36:30,696 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/26/bf/2728b0b86b879cf87de97326f6675a6c5b5d71ae571f5612e3e1f75694ff/peleffy-1.2.1-py3-none-any.whl#sha256=04d6f2dc8e0ca11fd5e70b0e38be6712740504f6fa22f5079aa3c1a2508db4c0 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,697 Found link https://files.pythonhosted.org/packages/97/a8/e35adddd101d6895288960cfabfb39fa1b29099a2829332908e51c832c16/peleffy-1.2.1.tar.gz#sha256=0ac701cd7aee59bd1d655fa09eb4b6075db7e57497e484eabe883f4be39c2a24 (from https://pypi.org/simple/peleffy/), version: 1.2.1 2022-06-13T10:36:30,698 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/2c/05/491552e7ffa6f8d88536cd1e3ceabe1fc1b181178216a1da5b9dc77df4ee/peleffy-1.3.0-py3-none-any.whl#sha256=7d7a810376b98b03bf32028fc48adfb2d86f05ae26e88d614c9655718e218ab5 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,699 Found link https://files.pythonhosted.org/packages/64/2b/8008f4e0c299218f926f89d6d4f67680103e72231ed1471be1734d716785/peleffy-1.3.0.tar.gz#sha256=cdd50acc4a7fe22555bb14357f20a21c85bd0e38b10bd65818d9fb185ddc08af (from https://pypi.org/simple/peleffy/), version: 1.3.0 2022-06-13T10:36:30,699 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/b5/71/f1db0dd925963a93165f0c8f0b3472cb2a431ec16458ab68051815695b63/peleffy-1.3.1-py3-none-any.whl#sha256=bad886f07bcb8f522e920bfd87d4716628d48951f8580f9a8672e5a5377f5796 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,700 Found link https://files.pythonhosted.org/packages/5e/78/58c8cae1e1909489e68560275e9df277523bc3900542f6be83a38f3f7bbd/peleffy-1.3.1.tar.gz#sha256=d7d21c9fd1bd302462e88eb7f015975ad0e282bfab2e00f205190b3ee840781f (from https://pypi.org/simple/peleffy/), version: 1.3.1 2022-06-13T10:36:30,701 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/87/89/6952471b60b6086b10023459205daaf6050092d51e5631208549cc45a50b/peleffy-1.3.2-py3-none-any.whl#sha256=b024570ac45d792ccc610b8fba1bc3c68fb73d8890b24361df11072abaf00ed5 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,702 Found link https://files.pythonhosted.org/packages/9b/55/7caefb115eae92faf59156fe64ae426ee1dc63d0cf34e28329f348343ce0/peleffy-1.3.2.tar.gz#sha256=4903750e6d98491039a145a53c10dc8061b837c2f514580545e2c5a00edca90b (from https://pypi.org/simple/peleffy/), version: 1.3.2 2022-06-13T10:36:30,703 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/8b/03/46f6d954892d46c641355d89b8786dc13ed9bc7f56480538fc86f13b3338/peleffy-1.3.3-py3-none-any.whl#sha256=635aa7b84bdbc7d6fb517586bea1dd2017a4de0f265a2c6852a782b1e580fb5a (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,704 Found link https://files.pythonhosted.org/packages/8a/f7/004635dfc277e05a90427a564820dc515a75826175fd148d377f3316d67c/peleffy-1.3.3.tar.gz#sha256=e4237cac697f3b09a4547274095e93bc44d5806daa7149071350787db8f418ae (from https://pypi.org/simple/peleffy/), version: 1.3.3 2022-06-13T10:36:30,704 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/44/9a/142e600e2e0c5b64c6440c959978510aa101917b7199ab32081105163738/peleffy-1.3.4-py3-none-any.whl#sha256=4e2f9dcf3f4ebcb9638fc98d270ba60b26fae35087e4484c0bcdda06f1d40bd3 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,705 Found link https://files.pythonhosted.org/packages/52/d5/f5588550aa1091c2b1530ce177c29924a6e958a6f70427d51f8f9f992123/peleffy-1.3.4.tar.gz#sha256=9d7312f8c4a76eeed03cad72209f7c4d7418784c5dcfe283d32ecc2f4f1ce4ce (from https://pypi.org/simple/peleffy/), version: 1.3.4 2022-06-13T10:36:30,706 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/f1/32/cf49d3b3e43de05458f3471def0e26e22128e0bd7a6f4c9caa6fd5cdbbf0/peleffy-1.4.0-py3-none-any.whl#sha256=ddb489b57fc5e3c61384d9ac49dd90c9ba386b94df38d60f95256e4fcf21a7be (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,707 Found link https://files.pythonhosted.org/packages/23/e1/73f8fbc4c275abab8f19452d6eaad40918b4f970c8c0a7468772f137d267/peleffy-1.4.0.tar.gz#sha256=93f2c25380d5d9a2c47ba1d54e934ad520fdc5cb66dd949177b13cc22e99b1f8 (from https://pypi.org/simple/peleffy/), version: 1.4.0 2022-06-13T10:36:30,708 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/ba/df/ce97e6e37c943d77a389fe6c2b4d418ec414a8e20c27e59ee04fd79e6b8b/peleffy-1.4.1-py3-none-any.whl#sha256=b52497a007b3dd5e69804c7ddbd5f411c3ee4f6834f75309897c1c6b2287b316 (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,708 Found link https://files.pythonhosted.org/packages/0d/cc/17c8fe292a8685a6ba9a288631a18a81caf383642c13aa4d141cd87898ec/peleffy-1.4.1.tar.gz#sha256=557bddaa1a6bf13175095f8fce193b35260870535e3e0978a77700f0e11f18cc (from https://pypi.org/simple/peleffy/), version: 1.4.1 2022-06-13T10:36:30,709 Skipping link: No binaries permitted for peleffy: https://files.pythonhosted.org/packages/e6/b8/631b797cd6e48624c9748501db41860821a41ec8b30c2fd877ff91c9ee57/peleffy-1.4.2-py3-none-any.whl#sha256=8a1d42e1d80c56af90c9fa0d03d34201231db4cb7fd82f523557717c57c9209a (from https://pypi.org/simple/peleffy/) 2022-06-13T10:36:30,710 Found link https://files.pythonhosted.org/packages/47/ea/2d71513014f53f53008bdbf5741cadacc16603671ffc8d903dac9f1bc5ed/peleffy-1.4.2.tar.gz#sha256=fe313c0b80cf4718d3cbd75c29e74fe0c6e72ae07d468a8017a1800688554f6a (from https://pypi.org/simple/peleffy/), version: 1.4.2 2022-06-13T10:36:30,711 Fetching project page and analyzing links: https://www.piwheels.org/simple/peleffy/ 2022-06-13T10:36:30,712 Getting page https://www.piwheels.org/simple/peleffy/ 2022-06-13T10:36:30,714 Found index url https://www.piwheels.org/simple 2022-06-13T10:36:30,946 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.4.1-py3-none-any.whl#sha256=37ffa36a2c02877a499c641ed2617a539b634a6c740a65d30b1c66e3c57d6543 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,946 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.4.0-py3-none-any.whl#sha256=bd3f73ab6827bf9ffca67a4f1e37b4b7f6938dbcaff53f571bad4865d0dff579 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,947 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.3.4-py3-none-any.whl#sha256=fc84e6c0426bdb9531d957c0875044c2cbfa9c2dfe9e7305ebf4dc7f9de98726 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,948 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.3.3-py3-none-any.whl#sha256=635aa7b84bdbc7d6fb517586bea1dd2017a4de0f265a2c6852a782b1e580fb5a (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,949 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.3.2-py3-none-any.whl#sha256=b024570ac45d792ccc610b8fba1bc3c68fb73d8890b24361df11072abaf00ed5 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,949 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.3.1-py3-none-any.whl#sha256=bad886f07bcb8f522e920bfd87d4716628d48951f8580f9a8672e5a5377f5796 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,950 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.3.0-py3-none-any.whl#sha256=7d7a810376b98b03bf32028fc48adfb2d86f05ae26e88d614c9655718e218ab5 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,950 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.2.1-py3-none-any.whl#sha256=04d6f2dc8e0ca11fd5e70b0e38be6712740504f6fa22f5079aa3c1a2508db4c0 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,951 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.2.0-py3-none-any.whl#sha256=e878b857b29bde2ff999215982041bd08680346fffc267b78cc62af8f2a8cde4 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,952 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.1.0-py3-none-any.whl#sha256=a3df3f04ad8aa2a3186a66e5b6e43de5d1defdfed840dcb07721802a24af6990 (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,952 Skipping link: No binaries permitted for peleffy: https://www.piwheels.org/simple/peleffy/peleffy-1.0.0-py3-none-any.whl#sha256=2ab64b6bbe61be4685b18c5d3f56c8e3f421b7bac1ac200647052a84d6c16aad (from https://www.piwheels.org/simple/peleffy/) 2022-06-13T10:36:30,986 Given no hashes to check 1 links for project 'peleffy': discarding no candidates 2022-06-13T10:36:31,018 Collecting peleffy==1.4.2 2022-06-13T10:36:31,022 Created temporary directory: /tmp/pip-unpack-x_8wc6ch 2022-06-13T10:36:31,270 Downloading peleffy-1.4.2.tar.gz (585 kB) 2022-06-13T10:36:32,719 Added peleffy==1.4.2 from https://files.pythonhosted.org/packages/47/ea/2d71513014f53f53008bdbf5741cadacc16603671ffc8d903dac9f1bc5ed/peleffy-1.4.2.tar.gz#sha256=fe313c0b80cf4718d3cbd75c29e74fe0c6e72ae07d468a8017a1800688554f6a to build tracker '/tmp/pip-req-tracker-d88wu35g' 2022-06-13T10:36:32,723 Running setup.py (path:/tmp/pip-wheel-lxjnondg/peleffy_7bf08d4c29ea4003beca87dcd087a2d7/setup.py) egg_info for package peleffy 2022-06-13T10:36:32,724 Created temporary directory: /tmp/pip-pip-egg-info-oyr49_km 2022-06-13T10:36:32,725 Running command python setup.py egg_info 2022-06-13T10:36:35,362 running egg_info 2022-06-13T10:36:35,367 creating /tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info 2022-06-13T10:36:35,369 writing dependency_links to /tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info/dependency_links.txt 2022-06-13T10:36:35,373 writing /tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info/PKG-INFO 2022-06-13T10:36:35,378 writing top-level names to /tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info/top_level.txt 2022-06-13T10:36:35,382 writing manifest file '/tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info/SOURCES.txt' 2022-06-13T10:36:35,397 package init file 'peleffy/data/__init__.py' not found (or not a regular file) 2022-06-13T10:36:35,483 reading manifest file '/tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info/SOURCES.txt' 2022-06-13T10:36:35,486 reading manifest template 'MANIFEST.in' 2022-06-13T10:36:35,505 writing manifest file '/tmp/pip-pip-egg-info-oyr49_km/peleffy.egg-info/SOURCES.txt' 2022-06-13T10:36:35,646 Source in /tmp/pip-wheel-lxjnondg/peleffy_7bf08d4c29ea4003beca87dcd087a2d7 has version 1.4.2, which satisfies requirement peleffy==1.4.2 from https://files.pythonhosted.org/packages/47/ea/2d71513014f53f53008bdbf5741cadacc16603671ffc8d903dac9f1bc5ed/peleffy-1.4.2.tar.gz#sha256=fe313c0b80cf4718d3cbd75c29e74fe0c6e72ae07d468a8017a1800688554f6a 2022-06-13T10:36:35,648 Removed peleffy==1.4.2 from https://files.pythonhosted.org/packages/47/ea/2d71513014f53f53008bdbf5741cadacc16603671ffc8d903dac9f1bc5ed/peleffy-1.4.2.tar.gz#sha256=fe313c0b80cf4718d3cbd75c29e74fe0c6e72ae07d468a8017a1800688554f6a from build tracker '/tmp/pip-req-tracker-d88wu35g' 2022-06-13T10:36:35,659 Created temporary directory: /tmp/pip-unpack-gbpyqbs_ 2022-06-13T10:36:35,661 Building wheels for collected packages: peleffy 2022-06-13T10:36:35,673 Created temporary directory: /tmp/pip-wheel-3ygv3d39 2022-06-13T10:36:35,674 Building wheel for peleffy (setup.py): started 2022-06-13T10:36:35,676 Destination directory: /tmp/pip-wheel-3ygv3d39 2022-06-13T10:36:35,677 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-lxjnondg/peleffy_7bf08d4c29ea4003beca87dcd087a2d7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-lxjnondg/peleffy_7bf08d4c29ea4003beca87dcd087a2d7/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3ygv3d39 2022-06-13T10:36:38,238 running bdist_wheel 2022-06-13T10:36:38,249 running build 2022-06-13T10:36:38,250 running build_py 2022-06-13T10:36:38,262 creating build 2022-06-13T10:36:38,263 creating build/lib 2022-06-13T10:36:38,264 creating build/lib/peleffy 2022-06-13T10:36:38,267 copying peleffy/_version.py -> build/lib/peleffy 2022-06-13T10:36:38,270 copying peleffy/__init__.py -> build/lib/peleffy 2022-06-13T10:36:38,274 copying peleffy/main.py -> build/lib/peleffy 2022-06-13T10:36:38,286 creating build/lib/peleffy/tests 2022-06-13T10:36:38,289 copying peleffy/tests/test_integrity.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,295 copying peleffy/tests/utils.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,301 copying peleffy/tests/test_alchemistry.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,322 copying peleffy/tests/test_parameters.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,334 copying peleffy/tests/test_main.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,342 copying peleffy/tests/test_topology.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,350 copying peleffy/tests/test_templates.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,357 copying peleffy/tests/test_conformers.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,362 copying peleffy/tests/test_rotamers.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,369 copying peleffy/tests/test_molecule.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,377 copying peleffy/tests/__init__.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,381 copying peleffy/tests/test_solvent.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,388 copying peleffy/tests/test_toolkits.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,395 copying peleffy/tests/test_utils.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,405 copying peleffy/tests/test_forcefields.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,413 copying peleffy/tests/test_mapper.py -> build/lib/peleffy/tests 2022-06-13T10:36:38,417 package init file 'peleffy/data/__init__.py' not found (or not a regular file) 2022-06-13T10:36:38,422 creating build/lib/peleffy/template 2022-06-13T10:36:38,424 copying peleffy/template/__init__.py -> build/lib/peleffy/template 2022-06-13T10:36:38,430 copying peleffy/template/impact.py -> build/lib/peleffy/template 2022-06-13T10:36:38,443 creating build/lib/peleffy/solvent 2022-06-13T10:36:38,446 copying peleffy/solvent/solvent.py -> build/lib/peleffy/solvent 2022-06-13T10:36:38,453 copying peleffy/solvent/__init__.py -> build/lib/peleffy/solvent 2022-06-13T10:36:38,462 creating build/lib/peleffy/topology 2022-06-13T10:36:38,464 copying peleffy/topology/elements.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,472 copying peleffy/topology/topology.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,478 copying peleffy/topology/alchemistry.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,488 copying peleffy/topology/molecule.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,498 copying peleffy/topology/zmatrix.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,505 copying peleffy/topology/mapper.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,511 copying peleffy/topology/__init__.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,517 copying peleffy/topology/rotamer.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,526 copying peleffy/topology/conformer.py -> build/lib/peleffy/topology 2022-06-13T10:36:38,534 creating build/lib/peleffy/forcefield 2022-06-13T10:36:38,537 copying peleffy/forcefield/forcefield.py -> build/lib/peleffy/forcefield 2022-06-13T10:36:38,544 copying peleffy/forcefield/parameters.py -> build/lib/peleffy/forcefield 2022-06-13T10:36:38,556 copying peleffy/forcefield/__init__.py -> build/lib/peleffy/forcefield 2022-06-13T10:36:38,561 copying peleffy/forcefield/calculators.py -> build/lib/peleffy/forcefield 2022-06-13T10:36:38,567 copying peleffy/forcefield/selectors.py -> build/lib/peleffy/forcefield 2022-06-13T10:36:38,576 creating build/lib/peleffy/utils 2022-06-13T10:36:38,579 copying peleffy/utils/utils.py -> build/lib/peleffy/utils 2022-06-13T10:36:38,587 copying peleffy/utils/output.py -> build/lib/peleffy/utils 2022-06-13T10:36:38,593 copying peleffy/utils/__init__.py -> build/lib/peleffy/utils 2022-06-13T10:36:38,598 copying peleffy/utils/toolkits.py -> build/lib/peleffy/utils 2022-06-13T10:36:38,609 copying peleffy/utils/input.py -> build/lib/peleffy/utils 2022-06-13T10:36:38,689 creating build/lib/peleffy/data 2022-06-13T10:36:38,690 creating build/lib/peleffy/data/forcefields 2022-06-13T10:36:38,692 copying peleffy/data/forcefields/GBSA_OBC2-1.0.offxml -> build/lib/peleffy/data/forcefields 2022-06-13T10:36:38,697 copying peleffy/data/forcefields/GBSA_OBC1-1.0.offxml -> build/lib/peleffy/data/forcefields 2022-06-13T10:36:38,702 creating build/lib/peleffy/data/parameters 2022-06-13T10:36:38,704 copying peleffy/data/parameters/f14_sgbnp.param -> build/lib/peleffy/data/parameters 2022-06-13T10:36:38,709 copying peleffy/data/parameters/ETH.conformation -> build/lib/peleffy/data/parameters 2022-06-13T10:36:38,714 copying peleffy/data/parameters/solventParamsHCTOBC.txt -> build/lib/peleffy/data/parameters 2022-06-13T10:36:38,727 copying peleffy/data/parameters/ETH.dihedral -> build/lib/peleffy/data/parameters 2022-06-13T10:36:38,733 copying peleffy/data/parameters/similarity.param -> build/lib/peleffy/data/parameters 2022-06-13T10:36:38,742 copying peleffy/data/parameters/OBCparam.json -> build/lib/peleffy/data/parameters 2022-06-13T10:36:38,748 creating build/lib/peleffy/data/tests 2022-06-13T10:36:38,750 copying peleffy/data/tests/ethylene_error1.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,757 copying peleffy/data/tests/MET_parameters_to_json.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,763 copying peleffy/data/tests/ligSUV_no_elements1.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,770 copying peleffy/data/tests/ethylene_error3.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,776 copying peleffy/data/tests/alchemical_0.rot.assign -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,780 copying peleffy/data/tests/etlz_OBCParams.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,785 copying peleffy/data/tests/metz -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,789 copying peleffy/data/tests/metz_amber -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,794 copying peleffy/data/tests/alchemical_mol2.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,799 copying peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters2.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,806 copying peleffy/data/tests/OPLS_etlz -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,812 copying peleffy/data/tests/OPLS_malz -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,818 copying peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters1.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,825 copying peleffy/data/tests/alchemical_structure.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,831 copying peleffy/data/tests/OPLS_metz_amber -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,837 copying peleffy/data/tests/ligSUV_no_elements3.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,844 copying peleffy/data/tests/etlz -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,850 copying peleffy/data/tests/OPLS_malz_amber -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,856 copying peleffy/data/tests/alchemical_ligandParams_1.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,861 copying peleffy/data/tests/ligSUV_fixed.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,867 copying peleffy/data/tests/MET_ffld_output.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,871 copying peleffy/data/tests/MET_solventParamsHCTOBC.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,884 copying peleffy/data/tests/malz_OBCParams.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,890 copying peleffy/data/tests/ETL_solventParamsHCTOBC.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,903 copying peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters4.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,909 copying peleffy/data/tests/alchemical_ligandParams_2.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,916 copying peleffy/data/tests/alchemical_ligandParams_0.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,922 copying peleffy/data/tests/MAL_ffld_output.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,930 copying peleffy/data/tests/ETL_openff-1.2.1_opls2005_parameters1.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,937 copying peleffy/data/tests/MET_parameters_to_string.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,944 copying peleffy/data/tests/etlz_amber -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,950 copying peleffy/data/tests/CO1_ffld_output.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,958 copying peleffy/data/tests/ethane_noH.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,965 copying peleffy/data/tests/alchemical_1.rot.assign -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,971 copying peleffy/data/tests/malz -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,978 copying peleffy/data/tests/metz_OBCParams.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,984 copying peleffy/data/tests/ethylene_error2.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,990 copying peleffy/data/tests/ETL_openff-1.2.1_opls2005_parameters2.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:38,998 copying peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters3.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,004 copying peleffy/data/tests/ETL_ffld_output.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,011 copying peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters5.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,018 copying peleffy/data/tests/malz_amber -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,024 copying peleffy/data/tests/OPLS_etlz_amber -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,031 copying peleffy/data/tests/ligandParams.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,038 copying peleffy/data/tests/OPLS_metz -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,045 copying peleffy/data/tests/unlz -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,052 copying peleffy/data/tests/alchemical_2.rot.assign -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,058 copying peleffy/data/tests/MET_openff-1.2.1_parameters.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,065 copying peleffy/data/tests/OXO_ffld_output.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,071 copying peleffy/data/tests/ligandParams_MAL.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,078 copying peleffy/data/tests/ethylene_error4.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,084 copying peleffy/data/tests/OLC_ffld_output.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,095 copying peleffy/data/tests/ETL_openff-1.2.1_parameters.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,102 copying peleffy/data/tests/ligSUV_no_elements2.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,110 copying peleffy/data/tests/MET_opls2005_parameters.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,116 copying peleffy/data/tests/MAL_solventParamsHCTOBC.txt -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,129 copying peleffy/data/tests/MAT.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,136 copying peleffy/data/tests/ETL_opls2005_parameters.json -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,144 copying peleffy/data/tests/alchemical_mol1.pdb -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,151 copying peleffy/data/tests/MAT.mae -> build/lib/peleffy/data/tests 2022-06-13T10:36:39,158 creating build/lib/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,161 copying peleffy/data/tests/MRO_oleic/OLC.pdb -> build/lib/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,167 copying peleffy/data/tests/MRO_oleic/MG.pdb -> build/lib/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,172 copying peleffy/data/tests/MRO_oleic/HEM.pdb -> build/lib/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,178 copying peleffy/data/tests/MRO_oleic/OXO.pdb -> build/lib/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,183 creating build/lib/peleffy/data/ligands 2022-06-13T10:36:39,185 copying peleffy/data/ligands/toluene.mae -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,193 copying peleffy/data/ligands/trimethylglycine.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,200 copying peleffy/data/ligands/ammonium.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,205 copying peleffy/data/ligands/SAM.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,210 copying peleffy/data/ligands/LIG2.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,216 copying peleffy/data/ligands/benzene.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,221 copying peleffy/data/ligands/malonate.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,227 copying peleffy/data/ligands/ligand.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,234 copying peleffy/data/ligands/propionic_acid.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,240 copying peleffy/data/ligands/toluene.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,246 copying peleffy/data/ligands/malonate.mae -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,251 copying peleffy/data/ligands/ethylene.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,255 copying peleffy/data/ligands/BHP.mae -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,261 copying peleffy/data/ligands/BHP.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,268 copying peleffy/data/ligands/trimethylglycine_moved.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,274 copying peleffy/data/ligands/octafluorocyclobutane.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,281 copying peleffy/data/ligands/benzene_without_connectivity.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,286 copying peleffy/data/ligands/oleic_acid.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,292 copying peleffy/data/ligands/LIG1.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,298 copying peleffy/data/ligands/benzene.mae -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,303 copying peleffy/data/ligands/modified_sidechain.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,310 copying peleffy/data/ligands/benzamidine.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,317 copying peleffy/data/ligands/methane.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,323 copying peleffy/data/ligands/BNZ.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,328 copying peleffy/data/ligands/ethylene.mae -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,333 copying peleffy/data/ligands/acetylene.pdb -> build/lib/peleffy/data/ligands 2022-06-13T10:36:39,337 creating build/lib/peleffy/data/complexes 2022-06-13T10:36:39,339 copying peleffy/data/complexes/5XXD_SAM.pdb -> build/lib/peleffy/data/complexes 2022-06-13T10:36:39,397 copying peleffy/data/complexes/complex_test.pdb -> build/lib/peleffy/data/complexes 2022-06-13T10:36:39,459 copying peleffy/data/complexes/LYS_BNZ.pdb -> build/lib/peleffy/data/complexes 2022-06-13T10:36:39,487 copying peleffy/data/complexes/LIG1_LIG2.pdb -> build/lib/peleffy/data/complexes 2022-06-13T10:36:39,531 UPDATING build/lib/peleffy/_version.py 2022-06-13T10:36:39,534 set build/lib/peleffy/_version.py to '1.4.2' 2022-06-13T10:36:39,541 installing to build/bdist.linux-armv7l/wheel 2022-06-13T10:36:39,543 running install 2022-06-13T10:36:39,544 running install_lib 2022-06-13T10:36:39,553 creating build/bdist.linux-armv7l 2022-06-13T10:36:39,553 creating build/bdist.linux-armv7l/wheel 2022-06-13T10:36:39,557 creating build/bdist.linux-armv7l/wheel/peleffy 2022-06-13T10:36:39,560 creating build/bdist.linux-armv7l/wheel/peleffy/solvent 2022-06-13T10:36:39,563 copying build/lib/peleffy/solvent/solvent.py -> build/bdist.linux-armv7l/wheel/peleffy/solvent 2022-06-13T10:36:39,569 copying build/lib/peleffy/solvent/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy/solvent 2022-06-13T10:36:39,576 creating build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,579 copying build/lib/peleffy/tests/test_integrity.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,585 copying build/lib/peleffy/tests/utils.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,591 copying build/lib/peleffy/tests/test_alchemistry.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,613 copying build/lib/peleffy/tests/test_parameters.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,625 copying build/lib/peleffy/tests/test_main.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,632 copying build/lib/peleffy/tests/test_topology.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,638 copying build/lib/peleffy/tests/test_templates.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,643 copying build/lib/peleffy/tests/test_conformers.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,648 copying build/lib/peleffy/tests/test_rotamers.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,655 copying build/lib/peleffy/tests/test_molecule.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,663 copying build/lib/peleffy/tests/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,668 copying build/lib/peleffy/tests/test_solvent.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,673 copying build/lib/peleffy/tests/test_toolkits.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,679 copying build/lib/peleffy/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,687 copying build/lib/peleffy/tests/test_forcefields.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,694 copying build/lib/peleffy/tests/test_mapper.py -> build/bdist.linux-armv7l/wheel/peleffy/tests 2022-06-13T10:36:39,699 copying build/lib/peleffy/_version.py -> build/bdist.linux-armv7l/wheel/peleffy 2022-06-13T10:36:39,706 creating build/bdist.linux-armv7l/wheel/peleffy/utils 2022-06-13T10:36:39,708 copying build/lib/peleffy/utils/utils.py -> build/bdist.linux-armv7l/wheel/peleffy/utils 2022-06-13T10:36:39,715 copying build/lib/peleffy/utils/output.py -> build/bdist.linux-armv7l/wheel/peleffy/utils 2022-06-13T10:36:39,720 copying build/lib/peleffy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy/utils 2022-06-13T10:36:39,724 copying build/lib/peleffy/utils/toolkits.py -> build/bdist.linux-armv7l/wheel/peleffy/utils 2022-06-13T10:36:39,734 copying build/lib/peleffy/utils/input.py -> build/bdist.linux-armv7l/wheel/peleffy/utils 2022-06-13T10:36:39,740 copying build/lib/peleffy/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy 2022-06-13T10:36:39,747 creating build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,750 copying build/lib/peleffy/topology/elements.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,758 copying build/lib/peleffy/topology/topology.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,763 copying build/lib/peleffy/topology/alchemistry.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,774 copying build/lib/peleffy/topology/molecule.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,783 copying build/lib/peleffy/topology/zmatrix.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,790 copying build/lib/peleffy/topology/mapper.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,795 copying build/lib/peleffy/topology/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,799 copying build/lib/peleffy/topology/rotamer.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,806 copying build/lib/peleffy/topology/conformer.py -> build/bdist.linux-armv7l/wheel/peleffy/topology 2022-06-13T10:36:39,812 creating build/bdist.linux-armv7l/wheel/peleffy/template 2022-06-13T10:36:39,817 copying build/lib/peleffy/template/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy/template 2022-06-13T10:36:39,823 copying build/lib/peleffy/template/impact.py -> build/bdist.linux-armv7l/wheel/peleffy/template 2022-06-13T10:36:39,834 creating build/bdist.linux-armv7l/wheel/peleffy/forcefield 2022-06-13T10:36:39,836 copying build/lib/peleffy/forcefield/forcefield.py -> build/bdist.linux-armv7l/wheel/peleffy/forcefield 2022-06-13T10:36:39,842 copying build/lib/peleffy/forcefield/parameters.py -> build/bdist.linux-armv7l/wheel/peleffy/forcefield 2022-06-13T10:36:39,852 copying build/lib/peleffy/forcefield/__init__.py -> build/bdist.linux-armv7l/wheel/peleffy/forcefield 2022-06-13T10:36:39,858 copying build/lib/peleffy/forcefield/calculators.py -> build/bdist.linux-armv7l/wheel/peleffy/forcefield 2022-06-13T10:36:39,864 copying build/lib/peleffy/forcefield/selectors.py -> build/bdist.linux-armv7l/wheel/peleffy/forcefield 2022-06-13T10:36:39,870 copying build/lib/peleffy/main.py -> build/bdist.linux-armv7l/wheel/peleffy 2022-06-13T10:36:39,878 creating build/bdist.linux-armv7l/wheel/peleffy/data 2022-06-13T10:36:39,880 creating build/bdist.linux-armv7l/wheel/peleffy/data/forcefields 2022-06-13T10:36:39,882 copying build/lib/peleffy/data/forcefields/GBSA_OBC2-1.0.offxml -> build/bdist.linux-armv7l/wheel/peleffy/data/forcefields 2022-06-13T10:36:39,887 copying build/lib/peleffy/data/forcefields/GBSA_OBC1-1.0.offxml -> build/bdist.linux-armv7l/wheel/peleffy/data/forcefields 2022-06-13T10:36:39,892 creating build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,894 copying build/lib/peleffy/data/parameters/f14_sgbnp.param -> build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,899 copying build/lib/peleffy/data/parameters/ETH.conformation -> build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,903 copying build/lib/peleffy/data/parameters/solventParamsHCTOBC.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,914 copying build/lib/peleffy/data/parameters/ETH.dihedral -> build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,919 copying build/lib/peleffy/data/parameters/similarity.param -> build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,927 copying build/lib/peleffy/data/parameters/OBCparam.json -> build/bdist.linux-armv7l/wheel/peleffy/data/parameters 2022-06-13T10:36:39,936 creating build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,938 copying build/lib/peleffy/data/tests/ethylene_error1.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,942 copying build/lib/peleffy/data/tests/MET_parameters_to_json.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,947 copying build/lib/peleffy/data/tests/ligSUV_no_elements1.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,951 copying build/lib/peleffy/data/tests/ethylene_error3.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,956 copying build/lib/peleffy/data/tests/alchemical_0.rot.assign -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,961 copying build/lib/peleffy/data/tests/etlz_OBCParams.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,966 copying build/lib/peleffy/data/tests/metz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,973 creating build/bdist.linux-armv7l/wheel/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,975 copying build/lib/peleffy/data/tests/MRO_oleic/OLC.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,981 copying build/lib/peleffy/data/tests/MRO_oleic/MG.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,985 copying build/lib/peleffy/data/tests/MRO_oleic/HEM.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,990 copying build/lib/peleffy/data/tests/MRO_oleic/OXO.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests/MRO_oleic 2022-06-13T10:36:39,994 copying build/lib/peleffy/data/tests/metz_amber -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:39,999 copying build/lib/peleffy/data/tests/alchemical_mol2.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,005 copying build/lib/peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters2.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,010 copying build/lib/peleffy/data/tests/OPLS_etlz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,015 copying build/lib/peleffy/data/tests/OPLS_malz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,019 copying build/lib/peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters1.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,024 copying build/lib/peleffy/data/tests/alchemical_structure.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,028 copying build/lib/peleffy/data/tests/OPLS_metz_amber -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,032 copying build/lib/peleffy/data/tests/ligSUV_no_elements3.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,037 copying build/lib/peleffy/data/tests/etlz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,043 copying build/lib/peleffy/data/tests/OPLS_malz_amber -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,048 copying build/lib/peleffy/data/tests/alchemical_ligandParams_1.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,054 copying build/lib/peleffy/data/tests/ligSUV_fixed.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,059 copying build/lib/peleffy/data/tests/MET_ffld_output.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,063 copying build/lib/peleffy/data/tests/MET_solventParamsHCTOBC.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,074 copying build/lib/peleffy/data/tests/malz_OBCParams.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,079 copying build/lib/peleffy/data/tests/ETL_solventParamsHCTOBC.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,091 copying build/lib/peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters4.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,097 copying build/lib/peleffy/data/tests/alchemical_ligandParams_2.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,101 copying build/lib/peleffy/data/tests/alchemical_ligandParams_0.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,105 copying build/lib/peleffy/data/tests/MAL_ffld_output.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,110 copying build/lib/peleffy/data/tests/ETL_openff-1.2.1_opls2005_parameters1.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,115 copying build/lib/peleffy/data/tests/MET_parameters_to_string.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,120 copying build/lib/peleffy/data/tests/etlz_amber -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,126 copying build/lib/peleffy/data/tests/CO1_ffld_output.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,133 copying build/lib/peleffy/data/tests/ethane_noH.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,138 copying build/lib/peleffy/data/tests/alchemical_1.rot.assign -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,142 copying build/lib/peleffy/data/tests/malz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,146 copying build/lib/peleffy/data/tests/metz_OBCParams.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,150 copying build/lib/peleffy/data/tests/ethylene_error2.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,154 copying build/lib/peleffy/data/tests/ETL_openff-1.2.1_opls2005_parameters2.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,159 copying build/lib/peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters3.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,165 copying build/lib/peleffy/data/tests/ETL_ffld_output.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,171 copying build/lib/peleffy/data/tests/MET_openff-1.2.1_opls2005_parameters5.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,177 copying build/lib/peleffy/data/tests/malz_amber -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,181 copying build/lib/peleffy/data/tests/OPLS_etlz_amber -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,186 copying build/lib/peleffy/data/tests/ligandParams.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,190 copying build/lib/peleffy/data/tests/OPLS_metz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,194 copying build/lib/peleffy/data/tests/unlz -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,199 copying build/lib/peleffy/data/tests/alchemical_2.rot.assign -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,204 copying build/lib/peleffy/data/tests/MET_openff-1.2.1_parameters.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,210 copying build/lib/peleffy/data/tests/OXO_ffld_output.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,216 copying build/lib/peleffy/data/tests/ligandParams_MAL.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,221 copying build/lib/peleffy/data/tests/ethylene_error4.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,225 copying build/lib/peleffy/data/tests/OLC_ffld_output.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,233 copying build/lib/peleffy/data/tests/ETL_openff-1.2.1_parameters.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,238 copying build/lib/peleffy/data/tests/ligSUV_no_elements2.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,244 copying build/lib/peleffy/data/tests/MET_opls2005_parameters.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,250 copying build/lib/peleffy/data/tests/MAL_solventParamsHCTOBC.txt -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,262 copying build/lib/peleffy/data/tests/MAT.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,266 copying build/lib/peleffy/data/tests/ETL_opls2005_parameters.json -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,271 copying build/lib/peleffy/data/tests/alchemical_mol1.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,275 copying build/lib/peleffy/data/tests/MAT.mae -> build/bdist.linux-armv7l/wheel/peleffy/data/tests 2022-06-13T10:36:40,283 creating build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,286 copying build/lib/peleffy/data/ligands/toluene.mae -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,293 copying build/lib/peleffy/data/ligands/trimethylglycine.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,298 copying build/lib/peleffy/data/ligands/ammonium.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,303 copying build/lib/peleffy/data/ligands/SAM.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,308 copying build/lib/peleffy/data/ligands/LIG2.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,313 copying build/lib/peleffy/data/ligands/benzene.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,317 copying build/lib/peleffy/data/ligands/malonate.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,321 copying build/lib/peleffy/data/ligands/ligand.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,327 copying build/lib/peleffy/data/ligands/propionic_acid.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,333 copying build/lib/peleffy/data/ligands/toluene.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,338 copying build/lib/peleffy/data/ligands/malonate.mae -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,343 copying build/lib/peleffy/data/ligands/ethylene.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,347 copying build/lib/peleffy/data/ligands/BHP.mae -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,353 copying build/lib/peleffy/data/ligands/BHP.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,357 copying build/lib/peleffy/data/ligands/trimethylglycine_moved.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,361 copying build/lib/peleffy/data/ligands/octafluorocyclobutane.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,366 copying build/lib/peleffy/data/ligands/benzene_without_connectivity.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,371 copying build/lib/peleffy/data/ligands/oleic_acid.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,378 copying build/lib/peleffy/data/ligands/LIG1.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,384 copying build/lib/peleffy/data/ligands/benzene.mae -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,391 copying build/lib/peleffy/data/ligands/modified_sidechain.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,397 copying build/lib/peleffy/data/ligands/benzamidine.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,402 copying build/lib/peleffy/data/ligands/methane.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,407 copying build/lib/peleffy/data/ligands/BNZ.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,411 copying build/lib/peleffy/data/ligands/ethylene.mae -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,415 copying build/lib/peleffy/data/ligands/acetylene.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/ligands 2022-06-13T10:36:40,420 creating build/bdist.linux-armv7l/wheel/peleffy/data/complexes 2022-06-13T10:36:40,421 copying build/lib/peleffy/data/complexes/5XXD_SAM.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/complexes 2022-06-13T10:36:40,478 copying build/lib/peleffy/data/complexes/complex_test.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/complexes 2022-06-13T10:36:40,538 copying build/lib/peleffy/data/complexes/LYS_BNZ.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/complexes 2022-06-13T10:36:40,563 copying build/lib/peleffy/data/complexes/LIG1_LIG2.pdb -> build/bdist.linux-armv7l/wheel/peleffy/data/complexes 2022-06-13T10:36:40,590 running install_egg_info 2022-06-13T10:36:40,624 running egg_info 2022-06-13T10:36:40,626 writing top-level names to peleffy.egg-info/top_level.txt 2022-06-13T10:36:40,628 writing peleffy.egg-info/PKG-INFO 2022-06-13T10:36:40,632 writing dependency_links to peleffy.egg-info/dependency_links.txt 2022-06-13T10:36:40,683 reading manifest file 'peleffy.egg-info/SOURCES.txt' 2022-06-13T10:36:40,694 reading manifest template 'MANIFEST.in' 2022-06-13T10:36:40,719 writing manifest file 'peleffy.egg-info/SOURCES.txt' 2022-06-13T10:36:40,724 Copying peleffy.egg-info to build/bdist.linux-armv7l/wheel/peleffy-1.4.2-py3.5.egg-info 2022-06-13T10:36:40,744 running install_scripts 2022-06-13T10:36:40,920 creating build/bdist.linux-armv7l/wheel/peleffy-1.4.2.dist-info/WHEEL 2022-06-13T10:36:42,355 Building wheel for peleffy (setup.py): finished with status 'done' 2022-06-13T10:36:42,370 Created wheel for peleffy: filename=peleffy-1.4.2-py3-none-any.whl size=625667 sha256=b7868ab85eb162aec862dc69ef6acdfc55a2036720c54f9c3d879c6d6d282c5d 2022-06-13T10:36:42,371 Stored in directory: /tmp/pip-ephem-wheel-cache-9yut52be/wheels/7f/66/31/4946f02f58673c528b9894f9f0de9aaa1c6bd6ec940fb46b7b 2022-06-13T10:36:42,401 Successfully built peleffy 2022-06-13T10:36:42,513 Removed build tracker: '/tmp/pip-req-tracker-d88wu35g'