2022-06-13T22:42:05,487 Created temporary directory: /tmp/pip-ephem-wheel-cache-xfj7ymmh 2022-06-13T22:42:05,492 Created temporary directory: /tmp/pip-build-tracker-x_tapk1s 2022-06-13T22:42:05,493 Initialized build tracking at /tmp/pip-build-tracker-x_tapk1s 2022-06-13T22:42:05,493 Created build tracker: /tmp/pip-build-tracker-x_tapk1s 2022-06-13T22:42:05,494 Entered build tracker: /tmp/pip-build-tracker-x_tapk1s 2022-06-13T22:42:05,495 Created temporary directory: /tmp/pip-wheel-lchosklh 2022-06-13T22:42:05,565 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-13T22:42:05,573 2 location(s) to search for versions of teca: 2022-06-13T22:42:05,573 * https://pypi.org/simple/teca/ 2022-06-13T22:42:05,573 * https://www.piwheels.org/simple/teca/ 2022-06-13T22:42:05,574 Fetching project page and analyzing links: https://pypi.org/simple/teca/ 2022-06-13T22:42:05,575 Getting page https://pypi.org/simple/teca/ 2022-06-13T22:42:05,579 Found index url https://pypi.org/simple 2022-06-13T22:42:05,698 Found link https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 (from https://pypi.org/simple/teca/), version: 2.2.1 2022-06-13T22:42:05,699 Found link https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e (from https://pypi.org/simple/teca/), version: 2.2.2 2022-06-13T22:42:05,700 Found link https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b (from https://pypi.org/simple/teca/), version: 3.0.0 2022-06-13T22:42:05,701 Found link https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 (from https://pypi.org/simple/teca/), version: 4.0.0 2022-06-13T22:42:05,701 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/70/4b/3ecb17552872c808d9b3f16d428780dae6a6fbb1c3dfdf1fa7af11141f2c/teca-4.1.0-py3.9-linux-x86_64.egg#sha256=3cf2bc49c8b6feea1450fb17e9c9a4f23cce8cdcf16d12148c9e9ee753c12725 (from https://pypi.org/simple/teca/) 2022-06-13T22:42:05,702 Found link https://files.pythonhosted.org/packages/5f/83/21a8fdb68f6211299f8154270d1e8dbac541f1fde15c15dde0c7cb46e143/teca-4.1.0.tar.gz#sha256=170d8f9f8a38e196597c37c67882e85fdf19e53729cd3bbf27be65ac9d3132e8 (from https://pypi.org/simple/teca/), version: 4.1.0 2022-06-13T22:42:05,702 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/02/87/d3fb6e72ef7bbf27d7494c2bdb1b0ec9b345f9cf5bb981862166d7b33c2d/teca-5.0.0-py3.10-linux-x86_64.egg#sha256=40c76387c1359b184e02d96ab9c25fdda621be7e5ae1740199bb0ae611a9cef9 (from https://pypi.org/simple/teca/) 2022-06-13T22:42:05,703 Found link https://files.pythonhosted.org/packages/4b/f7/68ffe8d60a51859e31d5b5063a454354cd2a2c79440d82f7de6255a42849/teca-5.0.0.tar.gz#sha256=38cf75ade3f3f22c7f2ab6412f665d7acb0f849e84766fb1234b9904cca3a377 (from https://pypi.org/simple/teca/), version: 5.0.0 2022-06-13T22:42:05,704 Fetching project page and analyzing links: https://www.piwheels.org/simple/teca/ 2022-06-13T22:42:05,704 Getting page https://www.piwheels.org/simple/teca/ 2022-06-13T22:42:05,707 Found index url https://www.piwheels.org/simple 2022-06-13T22:42:05,907 Skipping link: not a file: https://www.piwheels.org/simple/teca/ 2022-06-13T22:42:05,908 Skipping link: not a file: https://pypi.org/simple/teca/ 2022-06-13T22:42:05,954 Given no hashes to check 1 links for project 'teca': discarding no candidates 2022-06-13T22:42:05,995 Collecting teca==5.0.0 2022-06-13T22:42:06,000 Created temporary directory: /tmp/pip-unpack-g5mi61rn 2022-06-13T22:42:06,099 Downloading teca-5.0.0.tar.gz (818 kB) 2022-06-13T22:42:09,192 Added teca==5.0.0 from https://files.pythonhosted.org/packages/4b/f7/68ffe8d60a51859e31d5b5063a454354cd2a2c79440d82f7de6255a42849/teca-5.0.0.tar.gz#sha256=38cf75ade3f3f22c7f2ab6412f665d7acb0f849e84766fb1234b9904cca3a377 to build tracker '/tmp/pip-build-tracker-x_tapk1s' 2022-06-13T22:42:09,196 Running setup.py (path:/tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813/setup.py) egg_info for package teca 2022-06-13T22:42:09,197 Created temporary directory: /tmp/pip-pip-egg-info-3x35b1j4 2022-06-13T22:42:09,198 Preparing metadata (setup.py): started 2022-06-13T22:42:09,200 Running command python setup.py egg_info 2022-06-13T22:42:15,543 running egg_info 2022-06-13T22:42:15,550 creating /tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info 2022-06-13T22:42:16,165 writing /tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/PKG-INFO 2022-06-13T22:42:16,730 writing dependency_links to /tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/dependency_links.txt 2022-06-13T22:42:19,535 writing requirements to /tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/requires.txt 2022-06-13T22:42:20,099 writing top-level names to /tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/top_level.txt 2022-06-13T22:42:20,102 writing manifest file '/tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/SOURCES.txt' 2022-06-13T22:42:20,221 reading manifest file '/tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/SOURCES.txt' 2022-06-13T22:42:20,224 reading manifest template 'MANIFEST.in' 2022-06-13T22:42:20,773 warning: no previously-included files matching '*.pdf' found anywhere in distribution 2022-06-13T22:42:20,777 warning: no previously-included files matching '*.sw?' found anywhere in distribution 2022-06-13T22:42:20,778 adding license file 'LICENSE' 2022-06-13T22:42:20,779 adding license file 'LICENSE.md' 2022-06-13T22:42:20,832 writing manifest file '/tmp/pip-pip-egg-info-3x35b1j4/teca.egg-info/SOURCES.txt' 2022-06-13T22:42:21,059 Preparing metadata (setup.py): finished with status 'done' 2022-06-13T22:42:21,070 Source in /tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813 has version 5.0.0, which satisfies requirement teca==5.0.0 from https://files.pythonhosted.org/packages/4b/f7/68ffe8d60a51859e31d5b5063a454354cd2a2c79440d82f7de6255a42849/teca-5.0.0.tar.gz#sha256=38cf75ade3f3f22c7f2ab6412f665d7acb0f849e84766fb1234b9904cca3a377 2022-06-13T22:42:21,072 Removed teca==5.0.0 from https://files.pythonhosted.org/packages/4b/f7/68ffe8d60a51859e31d5b5063a454354cd2a2c79440d82f7de6255a42849/teca-5.0.0.tar.gz#sha256=38cf75ade3f3f22c7f2ab6412f665d7acb0f849e84766fb1234b9904cca3a377 from build tracker '/tmp/pip-build-tracker-x_tapk1s' 2022-06-13T22:42:21,080 Created temporary directory: /tmp/pip-unpack-a4lb2si2 2022-06-13T22:42:21,082 Building wheels for collected packages: teca 2022-06-13T22:42:21,091 Created temporary directory: /tmp/pip-wheel-dnt0wv2d 2022-06-13T22:42:21,092 Building wheel for teca (setup.py): started 2022-06-13T22:42:21,094 Destination directory: /tmp/pip-wheel-dnt0wv2d 2022-06-13T22:42:21,094 Running command python setup.py bdist_wheel 2022-06-13T22:42:26,871 running bdist_wheel 2022-06-13T22:42:27,041 running build 2022-06-13T22:42:27,042 running build_ext 2022-06-13T22:42:27,874 -- The C compiler identification is GNU 10.2.1 2022-06-13T22:42:28,573 -- The CXX compiler identification is GNU 10.2.1 2022-06-13T22:42:29,368 -- The Fortran compiler identification is GNU 10.2.1 2022-06-13T22:42:29,539 -- Detecting C compiler ABI info 2022-06-13T22:42:30,353 -- Detecting C compiler ABI info - done 2022-06-13T22:42:30,480 -- Check for working C compiler: /usr/bin/cc - skipped 2022-06-13T22:42:30,483 -- Detecting C compile features 2022-06-13T22:42:30,488 -- Detecting C compile features - done 2022-06-13T22:42:30,532 -- Detecting CXX compiler ABI info 2022-06-13T22:42:31,478 -- Detecting CXX compiler ABI info - done 2022-06-13T22:42:31,609 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2022-06-13T22:42:31,613 -- Detecting CXX compile features 2022-06-13T22:42:31,620 -- Detecting CXX compile features - done 2022-06-13T22:42:31,667 -- Detecting Fortran compiler ABI info 2022-06-13T22:42:32,642 -- Detecting Fortran compiler ABI info - done 2022-06-13T22:42:32,777 -- Check for working Fortran compiler: /usr/bin/gfortran - skipped 2022-06-13T22:42:32,778 -- Checking whether /usr/bin/gfortran supports Fortran 90 2022-06-13T22:42:33,760 -- Checking whether /usr/bin/gfortran supports Fortran 90 - yes 2022-06-13T22:42:33,775 -- Symbol visibility is set to hidden 2022-06-13T22:42:33,776 -- Configuring a Release build 2022-06-13T22:42:33,779 -- Check for c++ regex support 2022-06-13T22:43:07,337 -- Check for c++ regex support -- enabled 2022-06-13T22:43:07,345 -- Looking for a CUDA compiler 2022-06-13T22:43:07,643 -- Looking for a CUDA compiler - NOTFOUND 2022-06-13T22:43:07,643 -- CUDA features -- not found. 2022-06-13T22:43:09,582 -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1") 2022-06-13T22:43:19,460 -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1") 2022-06-13T22:43:29,818 -- Found MPI_Fortran: /usr/lib/arm-linux-gnueabihf/libmpi_usempif08.so (found version "3.1") 2022-06-13T22:43:29,822 -- Found MPI: TRUE (found version "3.1") 2022-06-13T22:43:29,827 -- MPI features -- enabled 2022-06-13T22:43:29,869 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") 2022-06-13T22:43:29,934 -- NETCDF_LIBRARY-NOTFOUND 2022-06-13T22:43:29,950 -- Could NOT find NetCDF (missing: NETCDF_LIBRARIES NETCDF_INCLUDE_DIRS) 2022-06-13T22:43:29,951 CMake Error at CMakeLists.txt:212 (message): 2022-06-13T22:43:29,951 NetCDF features -- required but not found. set NETCDF_DIR to enable. 2022-06-13T22:43:29,956 -- Configuring incomplete, errors occurred! 2022-06-13T22:43:29,957 See also "/tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813/build/temp.linux-armv7l-cpython-39/CMakeFiles/CMakeOutput.log". 2022-06-13T22:43:29,957 See also "/tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813/build/temp.linux-armv7l-cpython-39/CMakeFiles/CMakeError.log". 2022-06-13T22:43:29,993 ================================================================ 2022-06-13T22:43:29,994 An error ocured building TECA. This is usually a symptom 2022-06-13T22:43:29,994 of a missing dependency. The error messages above will indicate 2022-06-13T22:43:29,994 which package is missing. Install the development package for 2022-06-13T22:43:29,995 the missing dependency using your system's package manager 2022-06-13T22:43:29,995 ================================================================ 2022-06-13T22:43:29,995 subprocess.CalledProcessError: Command '['cmake', '/tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813', '-DCMAKE_INSTALL_PREFIX=/tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813/build/lib.linux-armv7l-cpython-39/teca', '-DLIB_PREFIX=.', '-DREQUIRE_PYTHON=TRUE', '-DTECA_PYTHON_VERSION=3', '-DREQUIRE_UDUNITS=TRUE', '-DREQUIRE_NETCDF=TRUE', '-DREQUIRE_BOOST=TRUE', '-DREQUIRE_OPENSSL=FALSE', '-DREQUIRE_MPI=TRUE', '-DENABLE_CRAY_MPICH=FALSE', '-DREQUIRE_NETCDF_MPI=TRUE', '-DREQUIRE_CUDA=FALSE', '-DREQUIRE_TECA_DATA=FALSE', '-DTECA_VERSION=5.0.0(PyPi)', '-DCMAKE_BUILD_TYPE=Release']' returned non-zero exit status 1. 2022-06-13T22:43:30,254 ERROR: [present-rich] python setup.py bdist_wheel exited with 1 2022-06-13T22:43:30,293 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2022-06-13T22:43:30,293 exec(compile('"'"''"'"''"'"' 2022-06-13T22:43:30,293 # This is -- a caller that pip uses to run setup.py 2022-06-13T22:43:30,293 # 2022-06-13T22:43:30,293 # - It imports setuptools before invoking setup.py, to enable projects that directly 2022-06-13T22:43:30,293 # import from `distutils.core` to work with newer packaging standards. 2022-06-13T22:43:30,293 # - It provides a clear error message when setuptools is not installed. 2022-06-13T22:43:30,293 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2022-06-13T22:43:30,293 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2022-06-13T22:43:30,293 # manifest_maker: standard file '"'"'-c'"'"' not found". 2022-06-13T22:43:30,293 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2022-06-13T22:43:30,293 import os, sys, tokenize 2022-06-13T22:43:30,293 2022-06-13T22:43:30,293 try: 2022-06-13T22:43:30,293 import setuptools 2022-06-13T22:43:30,293 except ImportError as error: 2022-06-13T22:43:30,293 print( 2022-06-13T22:43:30,293 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2022-06-13T22:43:30,293 "the build environment.", 2022-06-13T22:43:30,293 file=sys.stderr, 2022-06-13T22:43:30,293 ) 2022-06-13T22:43:30,293 sys.exit(1) 2022-06-13T22:43:30,293 2022-06-13T22:43:30,293 __file__ = %r 2022-06-13T22:43:30,293 sys.argv[0] = __file__ 2022-06-13T22:43:30,293 2022-06-13T22:43:30,293 if os.path.exists(__file__): 2022-06-13T22:43:30,293 filename = __file__ 2022-06-13T22:43:30,293 with tokenize.open(__file__) as f: 2022-06-13T22:43:30,293 setup_py_code = f.read() 2022-06-13T22:43:30,293 else: 2022-06-13T22:43:30,293 filename = "" 2022-06-13T22:43:30,293 setup_py_code = "from setuptools import setup; setup()" 2022-06-13T22:43:30,293 2022-06-13T22:43:30,293 exec(compile(setup_py_code, filename, "exec")) 2022-06-13T22:43:30,293 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-dnt0wv2d[/] 2022-06-13T22:43:30,293 [bold magenta]cwd[/]: /tmp/pip-wheel-lchosklh/teca_270ea594ffc84cf696ae73cd5d8fa813/ 2022-06-13T22:43:30,294 Building wheel for teca (setup.py): finished with status 'error' 2022-06-13T22:43:30,296 ERROR: Failed building wheel for teca 2022-06-13T22:43:30,298 Running setup.py clean for teca 2022-06-13T22:43:30,300 Running command python setup.py clean 2022-06-13T22:43:36,149 running clean 2022-06-13T22:43:36,260 removing 'build/temp.linux-armv7l-cpython-39' (and everything under it) 2022-06-13T22:43:36,297 'build/lib.linux-armv7l-cpython-39' does not exist -- can't clean it 2022-06-13T22:43:36,297 'build/bdist.linux-armv7l' does not exist -- can't clean it 2022-06-13T22:43:36,298 'build/scripts-3.9' does not exist -- can't clean it 2022-06-13T22:43:36,298 removing 'build' 2022-06-13T22:43:36,518 Failed to build teca 2022-06-13T22:43:36,521 ERROR: Failed to build one or more wheels 2022-06-13T22:43:36,525 Exception information: 2022-06-13T22:43:36,525 Traceback (most recent call last): 2022-06-13T22:43:36,525 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper 2022-06-13T22:43:36,525 status = run_func(*args) 2022-06-13T22:43:36,525 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-06-13T22:43:36,525 return func(self, options, args) 2022-06-13T22:43:36,525 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 175, in run 2022-06-13T22:43:36,525 raise CommandError("Failed to build one or more wheels") 2022-06-13T22:43:36,525 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2022-06-13T22:43:36,532 Removed build tracker: '/tmp/pip-build-tracker-x_tapk1s'