2022-06-14T21:19:28,909 Created temporary directory: /tmp/pip-ephem-wheel-cache-r1w_4qpq 2022-06-14T21:19:28,914 Created temporary directory: /tmp/pip-build-tracker-sizfwxfi 2022-06-14T21:19:28,915 Initialized build tracking at /tmp/pip-build-tracker-sizfwxfi 2022-06-14T21:19:28,916 Created build tracker: /tmp/pip-build-tracker-sizfwxfi 2022-06-14T21:19:28,916 Entered build tracker: /tmp/pip-build-tracker-sizfwxfi 2022-06-14T21:19:28,917 Created temporary directory: /tmp/pip-wheel-zwyn2b4w 2022-06-14T21:19:28,987 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-14T21:19:29,001 2 location(s) to search for versions of transmute-common: 2022-06-14T21:19:29,001 * https://pypi.org/simple/transmute-common/ 2022-06-14T21:19:29,001 * https://www.piwheels.org/simple/transmute-common/ 2022-06-14T21:19:29,002 Fetching project page and analyzing links: https://pypi.org/simple/transmute-common/ 2022-06-14T21:19:29,003 Getting page 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0.0.5 2022-06-14T21:19:29,141 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/48/18/bb330010a95b80002769bc64c7989f81cc62996ec5bed1c47f86eab21cd7/transmute_common-0.0.5-py3-none-any.whl#sha256=d5704ff6b4c045f8e1e29ffac5f166b6e4e57909a441f4776e8ee6aab3f27cb1 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,142 Found link https://files.pythonhosted.org/packages/c6/de/356dd4257a9a566a7eeead95cc399dfe7e8899cb4ab82ca430720aee1eda/transmute-common-0.0.6.tar.gz#sha256=ad265196fcfd6d7583ebedc6bf0552b34ce485c75f02b1a3d343e10cc9b35774 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8), version: 0.0.6 2022-06-14T21:19:29,143 Skipping link: No binaries permitted for transmute-common: 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2022-06-14T21:19:29,146 Found link https://files.pythonhosted.org/packages/30/30/c46c4bead63955277380ea05484633ebb73166eacf5251a238204a7e3939/transmute-common-0.0.8.tar.gz#sha256=b302f0e3e29cab0f3f79b11cf89201df554c33e0a0eef5028a37407a46da805f (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8), version: 0.0.8 2022-06-14T21:19:29,147 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/1f/0e/b63123b7b3034d0294cfd83e52c0abb16680506022c94242ff7b6c8173ec/transmute_common-0.0.8-py3-none-any.whl#sha256=deead1f1de0ccad590ddea6b5d758b14428d1189a33e637cd756f7b62dee87ed (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,148 Found link https://files.pythonhosted.org/packages/2a/c4/341b2dffa3e7c36d74773a32368d7a555cd4c26953137c634fb3478171ec/transmute-common-0.0.9.tar.gz#sha256=41583e326577c4f99a34585dac16ee763aaf780a8559c8650b133101a038d2ba (from https://pypi.org/simple/transmute-common/) 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(requires-python:>=3.8) 2022-06-14T21:19:29,154 Found link https://files.pythonhosted.org/packages/c4/f3/37782ed2b7e5169eee982954caec59a78456e3c9aeb2098973efbdca8ec8/transmute-common-0.0.12.tar.gz#sha256=351fdf242ed880cb9525f0ff2ab5b2fce64333cb4512a84691cc1f55146f1055 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8), version: 0.0.12 2022-06-14T21:19:29,155 Skipping link: No binaries permitted for transmute-common: https://files.pythonhosted.org/packages/ed/c5/6b7df20d7648e9ac7ec3b319088fd8080d7ba626178fcfdbc8d5b9c064ea/transmute_common-0.0.12-py3-none-any.whl#sha256=c90874d8b4098c1c02ace178f0cb48bf388a344fc4075d052d95096587d708d6 (from https://pypi.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,156 Fetching project page and analyzing links: https://www.piwheels.org/simple/transmute-common/ 2022-06-14T21:19:29,156 Getting page https://www.piwheels.org/simple/transmute-common/ 2022-06-14T21:19:29,159 Found index url https://www.piwheels.org/simple 2022-06-14T21:19:29,387 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.11-py3-none-any.whl#sha256=2cf2270cc75f852c1f9df1b8fe399fa1be6337ec5a8e5e2a923c45174692e675 (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,387 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.10-py3-none-any.whl#sha256=0db63f3a755da570f9805e2fcac2d8b5685c94cf188acc94b483fd7112c37940 (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,388 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.9-py3-none-any.whl#sha256=369c4f75b119ebcae7e3ba5933d4c46157014ee413f2d2ffd091a8046974f618 (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,388 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.8-py3-none-any.whl#sha256=1c94c01a45497867a4675a858aed45a42d5d452ef360d058c2be2face822ca74 (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,389 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.7-py3-none-any.whl#sha256=312830048c3c59fbca410e503d4c444f47debf1ea8cea35f400347c9c87f600a (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,389 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.6-py3-none-any.whl#sha256=a660bb5fccb230a20b29716884816e790795a96672adc1daeaf62eed09cddb91 (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,390 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.5-py3-none-any.whl#sha256=4d631442bc0008b786409eedf1933a2d41c4a682e5e80addae8604f3db1284ea (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,390 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.4-py3-none-any.whl#sha256=bc6757e392c385266ac375ff951de2d897562033c5fb0d7a7db5430026e87c6f (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.8) 2022-06-14T21:19:29,391 Skipping link: No binaries permitted for transmute-common: https://www.piwheels.org/simple/transmute-common/transmute_common-0.0.3-py3-none-any.whl#sha256=85355ad4b0e4f459b84352bb3726524aed03a07c978019b58a36ba0428ba723a (from https://www.piwheels.org/simple/transmute-common/) (requires-python:>=3.6) 2022-06-14T21:19:29,391 Skipping link: not a file: https://www.piwheels.org/simple/transmute-common/ 2022-06-14T21:19:29,392 Skipping link: not a file: https://pypi.org/simple/transmute-common/ 2022-06-14T21:19:29,440 Given no hashes to check 1 links for project 'transmute-common': discarding no candidates 2022-06-14T21:19:29,481 Collecting transmute-common==0.0.12 2022-06-14T21:19:29,486 Created temporary directory: /tmp/pip-unpack-2saw9nvg 2022-06-14T21:19:29,719 Downloading transmute-common-0.0.12.tar.gz (16 kB) 2022-06-14T21:19:29,847 Added transmute-common==0.0.12 from https://files.pythonhosted.org/packages/c4/f3/37782ed2b7e5169eee982954caec59a78456e3c9aeb2098973efbdca8ec8/transmute-common-0.0.12.tar.gz#sha256=351fdf242ed880cb9525f0ff2ab5b2fce64333cb4512a84691cc1f55146f1055 to build tracker '/tmp/pip-build-tracker-sizfwxfi' 2022-06-14T21:19:29,856 Created temporary directory: /tmp/pip-build-env-hjhbn91r 2022-06-14T21:19:29,877 Created temporary directory: /tmp/pip-standalone-pip-utjm188l 2022-06-14T21:19:32,265 Installing build dependencies: started 2022-06-14T21:19:32,268 Running command pip subprocess to install build dependencies 2022-06-14T21:19:43,561 Using pip 22.1.2 from /tmp/pip-standalone-pip-utjm188l/__env_pip__.zip/pip (python 3.9) 2022-06-14T21:19:45,171 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-14T21:19:49,009 Collecting setuptools>=54 2022-06-14T21:19:49,306 Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.4.0-py3-none-any.whl (1.2 MB) 2022-06-14T21:19:49,977 Collecting wheel 2022-06-14T21:19:50,012 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-06-14T21:19:56,973 Installing collected packages: wheel, setuptools 2022-06-14T21:19:57,268 Creating /tmp/pip-build-env-hjhbn91r/overlay/bin 2022-06-14T21:19:57,273 changing mode of /tmp/pip-build-env-hjhbn91r/overlay/bin/wheel to 755 2022-06-14T21:20:02,667 Successfully installed setuptools-62.4.0 wheel-0.37.1 2022-06-14T21:20:03,377 Installing build dependencies: finished with status 'done' 2022-06-14T21:20:03,406 Getting requirements to build wheel: started 2022-06-14T21:20:03,408 Running command Getting requirements to build wheel 2022-06-14T21:20:08,789 running egg_info 2022-06-14T21:20:09,379 writing transmute_common.egg-info/PKG-INFO 2022-06-14T21:20:09,937 writing dependency_links to transmute_common.egg-info/dependency_links.txt 2022-06-14T21:20:13,272 writing top-level names to transmute_common.egg-info/top_level.txt 2022-06-14T21:20:13,949 reading manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:13,954 adding license file 'LICENSE' 2022-06-14T21:20:13,960 writing manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:14,166 Getting requirements to build wheel: finished with status 'done' 2022-06-14T21:20:14,187 Created temporary directory: /tmp/pip-modern-metadata-opea27gg 2022-06-14T21:20:14,193 Preparing metadata (pyproject.toml): started 2022-06-14T21:20:14,195 Running command Preparing metadata (pyproject.toml) 2022-06-14T21:20:19,489 running dist_info 2022-06-14T21:20:20,111 creating /tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info 2022-06-14T21:20:20,708 writing /tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info/PKG-INFO 2022-06-14T21:20:21,274 writing dependency_links to /tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info/dependency_links.txt 2022-06-14T21:20:24,649 writing top-level names to /tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info/top_level.txt 2022-06-14T21:20:24,652 writing manifest file '/tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:25,329 reading manifest file '/tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:25,332 adding license file 'LICENSE' 2022-06-14T21:20:25,338 writing manifest file '/tmp/pip-modern-metadata-opea27gg/transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:25,340 creating '/tmp/pip-modern-metadata-opea27gg/transmute_common-0.0.12.dist-info' 2022-06-14T21:20:25,542 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-14T21:20:25,766 Preparing metadata (pyproject.toml): finished with status 'done' 2022-06-14T21:20:25,780 Source in /tmp/pip-wheel-zwyn2b4w/transmute-common_b3d5cfbc3f62488cb724ec46ef2be6aa has version 0.0.12, which satisfies requirement transmute-common==0.0.12 from https://files.pythonhosted.org/packages/c4/f3/37782ed2b7e5169eee982954caec59a78456e3c9aeb2098973efbdca8ec8/transmute-common-0.0.12.tar.gz#sha256=351fdf242ed880cb9525f0ff2ab5b2fce64333cb4512a84691cc1f55146f1055 2022-06-14T21:20:25,782 Removed transmute-common==0.0.12 from https://files.pythonhosted.org/packages/c4/f3/37782ed2b7e5169eee982954caec59a78456e3c9aeb2098973efbdca8ec8/transmute-common-0.0.12.tar.gz#sha256=351fdf242ed880cb9525f0ff2ab5b2fce64333cb4512a84691cc1f55146f1055 from build tracker '/tmp/pip-build-tracker-sizfwxfi' 2022-06-14T21:20:25,795 Created temporary directory: /tmp/pip-unpack-wkvn694b 2022-06-14T21:20:25,796 Building wheels for collected packages: transmute-common 2022-06-14T21:20:25,805 Created temporary directory: /tmp/pip-wheel-kp8br7ra 2022-06-14T21:20:25,806 Destination directory: /tmp/pip-wheel-kp8br7ra 2022-06-14T21:20:25,811 Building wheel for transmute-common (pyproject.toml): started 2022-06-14T21:20:25,813 Running command Building wheel for transmute-common (pyproject.toml) 2022-06-14T21:20:30,658 running bdist_wheel 2022-06-14T21:20:31,822 running build 2022-06-14T21:20:31,823 running build_py 2022-06-14T21:20:32,418 creating build 2022-06-14T21:20:32,419 creating build/lib 2022-06-14T21:20:32,420 creating build/lib/transmute_common 2022-06-14T21:20:32,422 copying transmute_common/__init__.py -> build/lib/transmute_common 2022-06-14T21:20:32,428 creating build/lib/transmute_common/factories 2022-06-14T21:20:32,430 copying transmute_common/factories/smallVariantAnalysis.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,433 copying transmute_common/factories/cnvAnalysis.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,437 copying transmute_common/factories/ihc.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,440 copying transmute_common/factories/fusion.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,444 copying transmute_common/factories/fusionAnalysis.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,447 copying transmute_common/factories/sample.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,450 copying transmute_common/factories/__init__.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,453 copying transmute_common/factories/patient.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,456 copying transmute_common/factories/ihcAnalysis.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,460 copying transmute_common/factories/biomarkerAnalysis.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,463 copying transmute_common/factories/cnv.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,467 copying transmute_common/factories/biomarker.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,470 copying transmute_common/factories/svAnalysis.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,474 copying transmute_common/factories/smallVariant.py -> build/lib/transmute_common/factories 2022-06-14T21:20:32,477 copying transmute_common/factories/sv.py -> build/lib/transmute_common/factories 2022-06-14T21:20:33,668 installing to build/bdist.linux-armv7l/wheel 2022-06-14T21:20:33,669 running install 2022-06-14T21:20:33,729 running install_lib 2022-06-14T21:20:34,371 creating build/bdist.linux-armv7l 2022-06-14T21:20:34,372 creating build/bdist.linux-armv7l/wheel 2022-06-14T21:20:34,375 creating build/bdist.linux-armv7l/wheel/transmute_common 2022-06-14T21:20:34,378 creating build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,380 copying build/lib/transmute_common/factories/smallVariantAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,383 copying build/lib/transmute_common/factories/cnvAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,387 copying build/lib/transmute_common/factories/ihc.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,391 copying build/lib/transmute_common/factories/fusion.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,394 copying build/lib/transmute_common/factories/fusionAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,398 copying build/lib/transmute_common/factories/sample.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,401 copying build/lib/transmute_common/factories/__init__.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,404 copying build/lib/transmute_common/factories/patient.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,408 copying build/lib/transmute_common/factories/ihcAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,411 copying build/lib/transmute_common/factories/biomarkerAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,415 copying build/lib/transmute_common/factories/cnv.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,418 copying build/lib/transmute_common/factories/biomarker.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,421 copying build/lib/transmute_common/factories/svAnalysis.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,425 copying build/lib/transmute_common/factories/smallVariant.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,428 copying build/lib/transmute_common/factories/sv.py -> build/bdist.linux-armv7l/wheel/transmute_common/factories 2022-06-14T21:20:34,432 copying build/lib/transmute_common/__init__.py -> build/bdist.linux-armv7l/wheel/transmute_common 2022-06-14T21:20:34,434 running install_egg_info 2022-06-14T21:20:35,656 running egg_info 2022-06-14T21:20:36,245 writing transmute_common.egg-info/PKG-INFO 2022-06-14T21:20:36,804 writing dependency_links to transmute_common.egg-info/dependency_links.txt 2022-06-14T21:20:40,146 writing top-level names to transmute_common.egg-info/top_level.txt 2022-06-14T21:20:40,189 reading manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:40,194 adding license file 'LICENSE' 2022-06-14T21:20:40,201 writing manifest file 'transmute_common.egg-info/SOURCES.txt' 2022-06-14T21:20:40,204 Copying transmute_common.egg-info to build/bdist.linux-armv7l/wheel/transmute_common-0.0.12-py3.9.egg-info 2022-06-14T21:20:40,222 running install_scripts 2022-06-14T21:20:40,372 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-14T21:20:40,383 creating build/bdist.linux-armv7l/wheel/transmute_common-0.0.12.dist-info/WHEEL 2022-06-14T21:20:40,388 creating '/tmp/pip-wheel-kp8br7ra/tmpvsuye7mw/transmute_common-0.0.12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-06-14T21:20:40,393 adding 'transmute_common/__init__.py' 2022-06-14T21:20:40,397 adding 'transmute_common/factories/__init__.py' 2022-06-14T21:20:40,400 adding 'transmute_common/factories/biomarker.py' 2022-06-14T21:20:40,403 adding 'transmute_common/factories/biomarkerAnalysis.py' 2022-06-14T21:20:40,406 adding 'transmute_common/factories/cnv.py' 2022-06-14T21:20:40,409 adding 'transmute_common/factories/cnvAnalysis.py' 2022-06-14T21:20:40,412 adding 'transmute_common/factories/fusion.py' 2022-06-14T21:20:40,414 adding 'transmute_common/factories/fusionAnalysis.py' 2022-06-14T21:20:40,417 adding 'transmute_common/factories/ihc.py' 2022-06-14T21:20:40,420 adding 'transmute_common/factories/ihcAnalysis.py' 2022-06-14T21:20:40,423 adding 'transmute_common/factories/patient.py' 2022-06-14T21:20:40,426 adding 'transmute_common/factories/sample.py' 2022-06-14T21:20:40,429 adding 'transmute_common/factories/smallVariant.py' 2022-06-14T21:20:40,432 adding 'transmute_common/factories/smallVariantAnalysis.py' 2022-06-14T21:20:40,435 adding 'transmute_common/factories/sv.py' 2022-06-14T21:20:40,438 adding 'transmute_common/factories/svAnalysis.py' 2022-06-14T21:20:40,455 adding 'transmute_common-0.0.12.dist-info/LICENSE' 2022-06-14T21:20:40,459 adding 'transmute_common-0.0.12.dist-info/METADATA' 2022-06-14T21:20:40,461 adding 'transmute_common-0.0.12.dist-info/WHEEL' 2022-06-14T21:20:40,464 adding 'transmute_common-0.0.12.dist-info/top_level.txt' 2022-06-14T21:20:40,466 adding 'transmute_common-0.0.12.dist-info/RECORD' 2022-06-14T21:20:40,470 removing build/bdist.linux-armv7l/wheel 2022-06-14T21:20:40,735 Building wheel for transmute-common (pyproject.toml): finished with status 'done' 2022-06-14T21:20:40,748 Created wheel for transmute-common: filename=transmute_common-0.0.12-py3-none-any.whl size=19628 sha256=69e98420f2c580c0483b690536bca00734c344411dded8ce6d7222dbf0da2b99 2022-06-14T21:20:40,750 Stored in directory: /tmp/pip-ephem-wheel-cache-r1w_4qpq/wheels/2c/6f/4c/0c48bb9c401545bbcd1f3840fbb77f6d5ecc8e426d1109ad39 2022-06-14T21:20:40,773 Successfully built transmute-common 2022-06-14T21:20:40,780 Removed build tracker: '/tmp/pip-build-tracker-sizfwxfi'