2022-06-19T10:50:45,653 Created temporary directory: /tmp/pip-ephem-wheel-cache-sojq979p 2022-06-19T10:50:45,659 Created temporary directory: /tmp/pip-req-tracker-bhrgxute 2022-06-19T10:50:45,660 Initialized build tracking at /tmp/pip-req-tracker-bhrgxute 2022-06-19T10:50:45,661 Created build tracker: /tmp/pip-req-tracker-bhrgxute 2022-06-19T10:50:45,661 Entered build tracker: /tmp/pip-req-tracker-bhrgxute 2022-06-19T10:50:45,662 Created temporary directory: /tmp/pip-wheel-qet5rve_ 2022-06-19T10:50:45,722 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-19T10:50:45,727 2 location(s) to search for versions of kage-genotyper: 2022-06-19T10:50:45,727 * https://pypi.org/simple/kage-genotyper/ 2022-06-19T10:50:45,727 * https://www.piwheels.org/simple/kage-genotyper/ 2022-06-19T10:50:45,727 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/ 2022-06-19T10:50:45,730 Getting page https://pypi.org/simple/kage-genotyper/ 2022-06-19T10:50:45,734 Found index url https://pypi.org/simple 2022-06-19T10:50:46,087 Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2 2022-06-19T10:50:46,089 Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3 2022-06-19T10:50:46,090 Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz#sha256=d4316597d56b72c41623b03f06ed0fcacdfe0e301ad49d49fadcfd41e1f881f6 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4 2022-06-19T10:50:46,091 Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz#sha256=78c0fdef5e5cf0ee401e5188dece6e297c3e20c3d72aa355c86426149d31819f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5 2022-06-19T10:50:46,092 Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6 2022-06-19T10:50:46,092 Found link https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce (from https://pypi.org/simple/kage-genotyper/), version: 0.0.7 2022-06-19T10:50:46,093 Found link https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea (from https://pypi.org/simple/kage-genotyper/), version: 0.0.8 2022-06-19T10:50:46,094 Found link https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz#sha256=062ad455d207590ac2c60f823dd2868cdb52324dc4d06e960cd314b3a114b6d3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.9 2022-06-19T10:50:46,095 Found link https://files.pythonhosted.org/packages/a3/cc/ba453ad8b8cb30ad50f71f35eb171b5fd2419999465ec9ae2572fc1816bb/kage-genotyper-0.0.10.tar.gz#sha256=267e5ed35e9f10ff41b40e710c2d4becc564d6e2922048c1d3892f3b1a5c1780 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.10 2022-06-19T10:50:46,096 Found link https://files.pythonhosted.org/packages/6a/54/8aba286e135663aade36ea3d9a597062aee31798db5622527b438994c2c2/kage-genotyper-0.0.12.tar.gz#sha256=05a080b9cd4f9250b5d7b0cffc7189491a019c8bc454499ef0b4cd6fe0de58f7 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.12 2022-06-19T10:50:46,097 Found link https://files.pythonhosted.org/packages/17/30/f3311d5d12dd04c079c18f0003d3d2d71b5948ee3cd18a74c29890b64a1a/kage-genotyper-0.0.13.tar.gz#sha256=773d6150af358c965da32ae381fbbc05d0ff7183f3a2c74bd1b5d1eb2093375f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.13 2022-06-19T10:50:46,098 Found link https://files.pythonhosted.org/packages/96/34/4fcd7e0720c9c302ff886c6a92fed693424313842c59864d7c85316dd688/kage-genotyper-0.0.14.tar.gz#sha256=e14a18186eedc478c0e0cd60a7d6a5c738254b83645e670d228ec75db370542b (from https://pypi.org/simple/kage-genotyper/), version: 0.0.14 2022-06-19T10:50:46,099 Found link https://files.pythonhosted.org/packages/f3/8b/e0cc70a7601f4c4104eed8edcfba5801143448954baa7aa5e8fdd052eee6/kage-genotyper-0.0.15.tar.gz#sha256=5fe95318bdec1573d9f50a68522efa6fd36d1d2040197d87e1e193d93d9f616e (from https://pypi.org/simple/kage-genotyper/), version: 0.0.15 2022-06-19T10:50:46,100 Found link https://files.pythonhosted.org/packages/e6/d1/5686f2e34b84a0800c2f8ad566d16ae77ce5d0f42348ffbf48e62c360fe2/kage-genotyper-0.0.16.tar.gz#sha256=a2beccbc9effcb710456042d6191ab3960f527f4147344c7eb4795ffd6a76dfe (from https://pypi.org/simple/kage-genotyper/), version: 0.0.16 2022-06-19T10:50:46,101 Found link https://files.pythonhosted.org/packages/38/fb/7fc95292837f188450095b39cba3774e469cd086c1fbc646a67168fff033/kage-genotyper-0.0.17.tar.gz#sha256=9b247512674448b6559994c05b151d22fb5f9a5d189980d296f03b4319b11bf9 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.17 2022-06-19T10:50:46,102 Found link https://files.pythonhosted.org/packages/11/d9/ac03f00ab30367578bb4b736502f5fe689b0eaa939bcf94d918c265bc66e/kage-genotyper-0.0.18.tar.gz#sha256=d068844475a22bc1b83a2a7e0887963c503b486dad5259c40d35032f8aace0c4 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.18 2022-06-19T10:50:46,103 Found link https://files.pythonhosted.org/packages/0f/78/d9e9825f272271a0710a2b61012c0d4408db5330306fbe7f9e44655f35c1/kage-genotyper-0.0.19.tar.gz#sha256=0aff4cc4a73778af7c20415566652f2ecfa0b7414ac0f9564fec9c219db4bea1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.19 2022-06-19T10:50:46,104 Found link https://files.pythonhosted.org/packages/27/1c/1c7840b44249035052e4755c560195f8fc3e3bb9eb0c5c7ef948cfdd7b81/kage-genotyper-0.0.20.tar.gz#sha256=e0df4b59c1fb31faf6bd9811c620f85a7e59422ca27e18bc847a0e4110bc5987 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.20 2022-06-19T10:50:46,105 Found link https://files.pythonhosted.org/packages/a0/22/7a0ee3155f5dcb657d1bb2b45d005a5b809ca34b5efae40e2e8fd8a5be4e/kage-genotyper-0.0.21.tar.gz#sha256=184f9c7d581c4f8022a2c35b763797e25d1201e488635a6280b4b3b068976150 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.21 2022-06-19T10:50:46,105 Found link https://files.pythonhosted.org/packages/e5/85/7107f0bddffb62199b75a0d83b1f2f147738b6288f9bcae648f682530538/kage-genotyper-0.0.22.tar.gz#sha256=2f7ca18f73db354eb3c4a2722b0b1c64ebcb951b21e32a7ef46050da4661ccd7 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.22 2022-06-19T10:50:46,106 Found link https://files.pythonhosted.org/packages/4c/e6/e5bde91b67bc9c0e2214f2c7d5553a607fa9ab1f3cb7fcae077f7b66806c/kage-genotyper-0.0.23.tar.gz#sha256=ebfcc2d5d6836c530c3b04360264dc18a51895e5eb2ab62cbb6d837abb66ba2b (from https://pypi.org/simple/kage-genotyper/), version: 0.0.23 2022-06-19T10:50:46,107 Found link https://files.pythonhosted.org/packages/2c/8b/dc4fdf2d083fb0c65d6cc2da49f912cbb7d84511c989a57e53d84396ab96/kage-genotyper-0.0.24.tar.gz#sha256=5618e6b7e0c595ab2c02037d96b65f6d75a1161868919381ddff10694f4078f1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.24 2022-06-19T10:50:46,108 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/ 2022-06-19T10:50:46,109 Getting page https://www.piwheels.org/simple/kage-genotyper/ 2022-06-19T10:50:46,112 Found index url https://www.piwheels.org/simple 2022-06-19T10:50:46,347 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.23-py3-none-any.whl#sha256=c18fe0b577c6929804d2c27354474dff0c3ee75b07aa56352a7a58cad13e6faa (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,348 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.22-py3-none-any.whl#sha256=d69afe43c7ad35a7f1a56f2bd46a364119ecc57afc5f66db5cb9441de6bde4be (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,348 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.21-py3-none-any.whl#sha256=986ef6dc08553b37b5f45a3f5d4fab3fe7b7533b66c46d61d0ccd7e1805808e9 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,349 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.20-py3-none-any.whl#sha256=52ce4e67bf082e0c52c1e017279afb7f816d91a56ba7b84f05da7b2f90c5f773 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,350 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.19-py3-none-any.whl#sha256=1e722fb7bd2ba87c1876b357e13c266b42cac5fe7a90181bdf470c0adf294a8b (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,350 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.18-py3-none-any.whl#sha256=e86a7b9cffd0dbcc1521c3de19e5df55b99115a71bb548f2987aca3e271eb3c4 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,351 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.17-py3-none-any.whl#sha256=028c50f35435ecf5cc9340632b04277e33156d88e7b5a7845902e025f88bd9d3 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,352 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.16-py3-none-any.whl#sha256=dab976f34303030cadeacc00def520c328db9330fcd801e2bcbd553b867566c4 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,352 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.15-py3-none-any.whl#sha256=81609a0f4e374c51e06eeb78fe684d382f3004234eba4b9bb5f10677f62f185c (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,353 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.14-py3-none-any.whl#sha256=a08f7b62017bb01e15c21b4752a1c020e022b2d1c97e4f473c1b4e1486c786a1 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,354 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.13-py3-none-any.whl#sha256=a256a7d8c6fbb49d6029a56d01e7608d04434d6016d8851d750b3c0a946fe0d4 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,354 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.12-py3-none-any.whl#sha256=7d3956620409c7b4f5acbfb7ba2f2c5b1ac4fa3761bc803d9500f4e627943de5 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,355 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.10-py3-none-any.whl#sha256=f0de4fec6f21e6c0e0fe926b55af6a9032fb8af3ff0ac0a4e462c49fa9fefaf5 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,355 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.9-py3-none-any.whl#sha256=6728e2c34e7473f450ba0dc3b680189ec324937e583ce456df04d4352047531b (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,356 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.8-py3-none-any.whl#sha256=17c38eb9469806ae1d16028b61450a754b7a2e9607b63cf4cb2c1bc4cd19f562 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,357 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.7-py3-none-any.whl#sha256=6c45550e73562e3543e4dedf63f5e42897169f62a701603f2c4a460ac1e0b5fa (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,357 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.6-py3-none-any.whl#sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,358 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,359 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,359 Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/) 2022-06-19T10:50:46,398 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates 2022-06-19T10:50:46,430 Collecting kage-genotyper==0.0.24 2022-06-19T10:50:46,434 Created temporary directory: /tmp/pip-unpack-fgfjn49e 2022-06-19T10:50:46,516 Downloading kage-genotyper-0.0.24.tar.gz (43 kB) 2022-06-19T10:50:46,752 Added kage-genotyper==0.0.24 from https://files.pythonhosted.org/packages/2c/8b/dc4fdf2d083fb0c65d6cc2da49f912cbb7d84511c989a57e53d84396ab96/kage-genotyper-0.0.24.tar.gz#sha256=5618e6b7e0c595ab2c02037d96b65f6d75a1161868919381ddff10694f4078f1 to build tracker '/tmp/pip-req-tracker-bhrgxute' 2022-06-19T10:50:46,754 Running setup.py (path:/tmp/pip-wheel-qet5rve_/kage-genotyper_27065633415a48418986ebdd6cb35fab/setup.py) egg_info for package kage-genotyper 2022-06-19T10:50:46,755 Created temporary directory: /tmp/pip-pip-egg-info-trfqxplp 2022-06-19T10:50:46,756 Running command python setup.py egg_info 2022-06-19T10:50:49,383 running egg_info 2022-06-19T10:50:49,389 creating /tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info 2022-06-19T10:50:49,392 writing dependency_links to /tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/dependency_links.txt 2022-06-19T10:50:49,395 writing entry points to /tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/entry_points.txt 2022-06-19T10:50:49,399 writing /tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/PKG-INFO 2022-06-19T10:50:49,403 writing requirements to /tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/requires.txt 2022-06-19T10:50:49,405 writing top-level names to /tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/top_level.txt 2022-06-19T10:50:49,409 writing manifest file '/tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/SOURCES.txt' 2022-06-19T10:50:49,809 reading manifest file '/tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/SOURCES.txt' 2022-06-19T10:50:49,819 writing manifest file '/tmp/pip-pip-egg-info-trfqxplp/kage_genotyper.egg-info/SOURCES.txt' 2022-06-19T10:50:49,960 Source in /tmp/pip-wheel-qet5rve_/kage-genotyper_27065633415a48418986ebdd6cb35fab has version 0.0.24, which satisfies requirement kage-genotyper==0.0.24 from https://files.pythonhosted.org/packages/2c/8b/dc4fdf2d083fb0c65d6cc2da49f912cbb7d84511c989a57e53d84396ab96/kage-genotyper-0.0.24.tar.gz#sha256=5618e6b7e0c595ab2c02037d96b65f6d75a1161868919381ddff10694f4078f1 2022-06-19T10:50:49,962 Removed kage-genotyper==0.0.24 from https://files.pythonhosted.org/packages/2c/8b/dc4fdf2d083fb0c65d6cc2da49f912cbb7d84511c989a57e53d84396ab96/kage-genotyper-0.0.24.tar.gz#sha256=5618e6b7e0c595ab2c02037d96b65f6d75a1161868919381ddff10694f4078f1 from build tracker '/tmp/pip-req-tracker-bhrgxute' 2022-06-19T10:50:49,970 Created temporary directory: /tmp/pip-unpack-mmigjxwy 2022-06-19T10:50:49,971 Building wheels for collected packages: kage-genotyper 2022-06-19T10:50:49,980 Created temporary directory: /tmp/pip-wheel-nuqk7wwa 2022-06-19T10:50:49,981 Building wheel for kage-genotyper (setup.py): started 2022-06-19T10:50:49,982 Destination directory: /tmp/pip-wheel-nuqk7wwa 2022-06-19T10:50:49,982 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-qet5rve_/kage-genotyper_27065633415a48418986ebdd6cb35fab/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-qet5rve_/kage-genotyper_27065633415a48418986ebdd6cb35fab/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-nuqk7wwa 2022-06-19T10:50:52,596 running bdist_wheel 2022-06-19T10:50:52,615 running build 2022-06-19T10:50:52,616 running build_py 2022-06-19T10:50:52,954 creating build 2022-06-19T10:50:52,955 creating build/lib 2022-06-19T10:50:52,956 creating build/lib/kage 2022-06-19T10:50:52,959 copying kage/command_line_interface.py -> build/lib/kage 2022-06-19T10:50:52,968 copying kage/variant_kmer_analyser.py -> build/lib/kage 2022-06-19T10:50:52,972 copying kage/util.py -> build/lib/kage 2022-06-19T10:50:52,976 copying kage/genotyper.py -> build/lib/kage 2022-06-19T10:50:52,982 copying kage/analysis.py -> build/lib/kage 2022-06-19T10:50:52,989 copying kage/variant_filtering.py -> build/lib/kage 2022-06-19T10:50:52,994 copying kage/models.py -> build/lib/kage 2022-06-19T10:50:53,001 copying kage/node_counts.py -> build/lib/kage 2022-06-19T10:50:53,006 copying kage/sampling_combo_model.py -> build/lib/kage 2022-06-19T10:50:53,013 copying kage/__init__.py -> build/lib/kage 2022-06-19T10:50:53,019 copying kage/combination_model_genotyper.py -> build/lib/kage 2022-06-19T10:50:53,025 copying kage/combomodel.py -> build/lib/kage 2022-06-19T10:50:53,032 copying kage/helper_index.py -> build/lib/kage 2022-06-19T10:50:53,039 copying kage/node_count_model.py -> build/lib/kage 2022-06-19T10:50:53,046 copying kage/gaf_parsing.py -> build/lib/kage 2022-06-19T10:50:53,052 copying kage/joint_distribution.py -> build/lib/kage 2022-06-19T10:50:53,057 copying kage/numpy_genotyper.py -> build/lib/kage 2022-06-19T10:50:53,065 copying kage/simulation.py -> build/lib/kage 2022-06-19T10:50:53,070 copying kage/mapping_model.py -> build/lib/kage 2022-06-19T10:50:53,076 copying kage/reference_kmers.py -> build/lib/kage 2022-06-19T10:50:53,080 copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage 2022-06-19T10:50:53,084 copying kage/reads.py -> build/lib/kage 2022-06-19T10:50:53,089 copying kage/tricky_variants.py -> build/lib/kage 2022-06-19T10:50:53,095 copying kage/negative_binomial_model.py -> build/lib/kage 2022-06-19T10:50:53,117 installing to build/bdist.linux-armv7l/wheel 2022-06-19T10:50:53,117 running install 2022-06-19T10:50:53,119 running install_lib 2022-06-19T10:50:53,128 creating build/bdist.linux-armv7l 2022-06-19T10:50:53,129 creating build/bdist.linux-armv7l/wheel 2022-06-19T10:50:53,134 creating build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,136 copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,145 copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,150 copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,155 copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,163 copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,171 copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,177 copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,183 copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,189 copying build/lib/kage/sampling_combo_model.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,196 copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,201 copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,208 copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,215 copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,221 copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,228 copying build/lib/kage/gaf_parsing.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,234 copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,239 copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,247 copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,254 copying build/lib/kage/mapping_model.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,261 copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,267 copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,272 copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,277 copying build/lib/kage/tricky_variants.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,281 copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage 2022-06-19T10:50:53,285 running install_egg_info 2022-06-19T10:50:53,332 running egg_info 2022-06-19T10:50:53,334 writing requirements to kage_genotyper.egg-info/requires.txt 2022-06-19T10:50:53,337 writing kage_genotyper.egg-info/PKG-INFO 2022-06-19T10:50:53,341 writing top-level names to kage_genotyper.egg-info/top_level.txt 2022-06-19T10:50:53,343 writing entry points to kage_genotyper.egg-info/entry_points.txt 2022-06-19T10:50:53,346 writing dependency_links to kage_genotyper.egg-info/dependency_links.txt 2022-06-19T10:50:53,385 reading manifest file 'kage_genotyper.egg-info/SOURCES.txt' 2022-06-19T10:50:53,399 writing manifest file 'kage_genotyper.egg-info/SOURCES.txt' 2022-06-19T10:50:53,402 Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.24-py3.5.egg-info 2022-06-19T10:50:53,439 running install_scripts 2022-06-19T10:50:53,655 creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.24.dist-info/WHEEL 2022-06-19T10:50:53,975 Building wheel for kage-genotyper (setup.py): finished with status 'done' 2022-06-19T10:50:53,980 Created wheel for kage-genotyper: filename=kage_genotyper-0.0.24-py3-none-any.whl size=52395 sha256=b71fc42047e6354a93f096624bba70c64d698923d0c463291ba16a9330719df3 2022-06-19T10:50:53,981 Stored in directory: /tmp/pip-ephem-wheel-cache-sojq979p/wheels/0d/18/a1/a38dd9e69685422141881f74e7dcba506f6324ff3ceeeaa0a4 2022-06-19T10:50:54,000 Successfully built kage-genotyper 2022-06-19T10:50:54,014 Removed build tracker: '/tmp/pip-req-tracker-bhrgxute'