2022-06-25T15:09:08,116 Created temporary directory: /tmp/pip-ephem-wheel-cache-k_np5jz1
2022-06-25T15:09:08,122 Created temporary directory: /tmp/pip-build-tracker-u0u0m24t
2022-06-25T15:09:08,122 Initialized build tracking at /tmp/pip-build-tracker-u0u0m24t
2022-06-25T15:09:08,123 Created build tracker: /tmp/pip-build-tracker-u0u0m24t
2022-06-25T15:09:08,123 Entered build tracker: /tmp/pip-build-tracker-u0u0m24t
2022-06-25T15:09:08,124 Created temporary directory: /tmp/pip-wheel-ntdl79qn
2022-06-25T15:09:08,194 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-06-25T15:09:08,208 2 location(s) to search for versions of calorine:
2022-06-25T15:09:08,208 * https://pypi.org/simple/calorine/
2022-06-25T15:09:08,208 * https://www.piwheels.org/simple/calorine/
2022-06-25T15:09:08,209 Fetching project page and analyzing links: https://pypi.org/simple/calorine/
2022-06-25T15:09:08,210 Getting page https://pypi.org/simple/calorine/
2022-06-25T15:09:08,213 Found index url https://pypi.org/simple
2022-06-25T15:09:08,330   Found link https://files.pythonhosted.org/packages/12/1b/629c5c5c05ce38726b3cb8123032e930fcf40287f07da6e5e72417eedd18/calorine-1.0.tar.gz#sha256=d1c6ecf184b0f4c1eff896391547e38da6ecf2962edfa7886fc867cd80a3347b (from https://pypi.org/simple/calorine/), version: 1.0
2022-06-25T15:09:08,330   Found link https://files.pythonhosted.org/packages/9f/7c/0d35c626f0a1cf62830b0e9f5b222b6e188c30686415a1a92d568822bac2/calorine-1.1.tar.gz#sha256=8c4cb84d790012cb1356c4f3efb26dded1377e664b6239efe62d15c5f9bb41e2 (from https://pypi.org/simple/calorine/), version: 1.1
2022-06-25T15:09:08,331 Fetching project page and analyzing links: https://www.piwheels.org/simple/calorine/
2022-06-25T15:09:08,332 Getting page https://www.piwheels.org/simple/calorine/
2022-06-25T15:09:08,334 Found index url https://www.piwheels.org/simple
2022-06-25T15:09:08,564   Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.1-cp37-cp37m-linux_armv7l.whl#sha256=c2edfd7b97c0df0babf2392683e0798921edacbf28d8c715acefe02e5f4c8e62 (from https://www.piwheels.org/simple/calorine/)
2022-06-25T15:09:08,565   Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.1-cp37-cp37m-linux_armv6l.whl#sha256=c2edfd7b97c0df0babf2392683e0798921edacbf28d8c715acefe02e5f4c8e62 (from https://www.piwheels.org/simple/calorine/)
2022-06-25T15:09:08,566   Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp39-cp39-linux_armv7l.whl#sha256=19582f5985781dca6d58bacdb947d1956345ffe73d62312ef2922e5fe2b0274e (from https://www.piwheels.org/simple/calorine/)
2022-06-25T15:09:08,566   Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp39-cp39-linux_armv6l.whl#sha256=19582f5985781dca6d58bacdb947d1956345ffe73d62312ef2922e5fe2b0274e (from https://www.piwheels.org/simple/calorine/)
2022-06-25T15:09:08,567   Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp37-cp37m-linux_armv7l.whl#sha256=f40b9e6da126bb222aa48362a8bd94c26acd6d5d8201b5d570c60ccb67a2ec4f (from https://www.piwheels.org/simple/calorine/)
2022-06-25T15:09:08,567   Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp37-cp37m-linux_armv6l.whl#sha256=f40b9e6da126bb222aa48362a8bd94c26acd6d5d8201b5d570c60ccb67a2ec4f (from https://www.piwheels.org/simple/calorine/)
2022-06-25T15:09:08,568 Skipping link: not a file: https://www.piwheels.org/simple/calorine/
2022-06-25T15:09:08,568 Skipping link: not a file: https://pypi.org/simple/calorine/
2022-06-25T15:09:08,613 Given no hashes to check 1 links for project 'calorine': discarding no candidates
2022-06-25T15:09:08,654 Collecting calorine==1.1
2022-06-25T15:09:08,659   Created temporary directory: /tmp/pip-unpack-slw21eg7
2022-06-25T15:09:08,972   Downloading calorine-1.1.tar.gz (418 kB)
2022-06-25T15:09:09,739   Added calorine==1.1 from https://files.pythonhosted.org/packages/9f/7c/0d35c626f0a1cf62830b0e9f5b222b6e188c30686415a1a92d568822bac2/calorine-1.1.tar.gz#sha256=8c4cb84d790012cb1356c4f3efb26dded1377e664b6239efe62d15c5f9bb41e2 to build tracker '/tmp/pip-build-tracker-u0u0m24t'
2022-06-25T15:09:09,743   Running setup.py (path:/tmp/pip-wheel-ntdl79qn/calorine_da03ccea10ab4d27910c24cc5dc2ae7c/setup.py) egg_info for package calorine
2022-06-25T15:09:09,744   Created temporary directory: /tmp/pip-pip-egg-info-je3td5z0
2022-06-25T15:09:09,744   Preparing metadata (setup.py): started
2022-06-25T15:09:09,746   Running command python setup.py egg_info
2022-06-25T15:09:16,865   running egg_info
2022-06-25T15:09:16,871   creating /tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info
2022-06-25T15:09:17,504   writing /tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/PKG-INFO
2022-06-25T15:09:18,064   writing dependency_links to /tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/dependency_links.txt
2022-06-25T15:09:20,836   writing requirements to /tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/requires.txt
2022-06-25T15:09:21,390   writing top-level names to /tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/top_level.txt
2022-06-25T15:09:21,393   writing manifest file '/tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/SOURCES.txt'
2022-06-25T15:09:22,200   reading manifest file '/tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/SOURCES.txt'
2022-06-25T15:09:22,208   writing manifest file '/tmp/pip-pip-egg-info-je3td5z0/calorine.egg-info/SOURCES.txt'
2022-06-25T15:09:22,430   Preparing metadata (setup.py): finished with status 'done'
2022-06-25T15:09:22,441   Source in /tmp/pip-wheel-ntdl79qn/calorine_da03ccea10ab4d27910c24cc5dc2ae7c has version 1.1, which satisfies requirement calorine==1.1 from https://files.pythonhosted.org/packages/9f/7c/0d35c626f0a1cf62830b0e9f5b222b6e188c30686415a1a92d568822bac2/calorine-1.1.tar.gz#sha256=8c4cb84d790012cb1356c4f3efb26dded1377e664b6239efe62d15c5f9bb41e2
2022-06-25T15:09:22,443   Removed calorine==1.1 from https://files.pythonhosted.org/packages/9f/7c/0d35c626f0a1cf62830b0e9f5b222b6e188c30686415a1a92d568822bac2/calorine-1.1.tar.gz#sha256=8c4cb84d790012cb1356c4f3efb26dded1377e664b6239efe62d15c5f9bb41e2 from build tracker '/tmp/pip-build-tracker-u0u0m24t'
2022-06-25T15:09:22,451 Created temporary directory: /tmp/pip-unpack-vedl5bsn
2022-06-25T15:09:22,452 Building wheels for collected packages: calorine
2022-06-25T15:09:22,461   Created temporary directory: /tmp/pip-wheel-r1lc__h3
2022-06-25T15:09:22,462   Building wheel for calorine (setup.py): started
2022-06-25T15:09:22,464   Destination directory: /tmp/pip-wheel-r1lc__h3
2022-06-25T15:09:22,465   Running command python setup.py bdist_wheel
2022-06-25T15:09:29,001   running bdist_wheel
2022-06-25T15:09:29,237   running build
2022-06-25T15:09:29,238   running build_py
2022-06-25T15:09:29,879   creating build
2022-06-25T15:09:29,879   creating build/lib.linux-armv7l-cpython-39
2022-06-25T15:09:29,881   creating build/lib.linux-armv7l-cpython-39/calorine
2022-06-25T15:09:29,883   copying calorine/data_analysis.py -> build/lib.linux-armv7l-cpython-39/calorine
2022-06-25T15:09:29,887   copying calorine/analysis.py -> build/lib.linux-armv7l-cpython-39/calorine
2022-06-25T15:09:29,892   copying calorine/gpunep_calculator.py -> build/lib.linux-armv7l-cpython-39/calorine
2022-06-25T15:09:29,897   copying calorine/__init__.py -> build/lib.linux-armv7l-cpython-39/calorine
2022-06-25T15:09:29,900   copying calorine/io.py -> build/lib.linux-armv7l-cpython-39/calorine
2022-06-25T15:09:29,906   creating build/lib.linux-armv7l-cpython-39/calorine/nepy
2022-06-25T15:09:29,908   copying calorine/nepy/cpunep_calculator.py -> build/lib.linux-armv7l-cpython-39/calorine/nepy
2022-06-25T15:09:29,912   copying calorine/nepy/nep.py -> build/lib.linux-armv7l-cpython-39/calorine/nepy
2022-06-25T15:09:29,916   copying calorine/nepy/__init__.py -> build/lib.linux-armv7l-cpython-39/calorine/nepy
2022-06-25T15:09:29,921   running build_ext
2022-06-25T15:09:29,939   creating tmp
2022-06-25T15:09:29,940   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpwslwqj1g.cpp -o tmp/tmpwslwqj1g.o -std=c++14
2022-06-25T15:09:30,210   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpdh2bkmak.cpp -o tmp/tmpdh2bkmak.o -fvisibility=hidden
2022-06-25T15:09:30,387   building '_nepy' extension
2022-06-25T15:09:30,388   creating build/temp.linux-armv7l-cpython-39
2022-06-25T15:09:30,389   creating build/temp.linux-armv7l-cpython-39/src
2022-06-25T15:09:30,390   creating build/temp.linux-armv7l-cpython-39/src/nepy
2022-06-25T15:09:30,392   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/nepy/pybind11/include/ -I/usr/include/python3.9 -c src/nepy/nepy.cpp -o build/temp.linux-armv7l-cpython-39/src/nepy/nepy.o -DVERSION_INFO='1.1' -std=c++14 -O3 -fvisibility=hidden
2022-06-25T15:09:34,450   In file included from src/nepy/nepy.cpp:2:
2022-06-25T15:09:34,451   src/nepy/nep.cpp: In member function ‘void NEP3::compute(const std::vector<int>&, const std::vector<double>&, const std::vector<double>&, std::vector<double>&, std::vector<double>&, std::vector<double>&)’:
2022-06-25T15:09:34,451   src/nepy/nep.cpp:1445:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,452    1445 |   if (N * 3 != position.size()) {
2022-06-25T15:09:34,452         |       ~~~~~~^~~~~~~~~~~~~~~~~~
2022-06-25T15:09:34,453   src/nepy/nep.cpp:1449:9: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,453    1449 |   if (N != potential.size()) {
2022-06-25T15:09:34,453         |       ~~^~~~~~~~~~~~~~~~~~~
2022-06-25T15:09:34,455   src/nepy/nep.cpp:1454:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,455    1454 |   if (N * 3 != force.size()) {
2022-06-25T15:09:34,456         |       ~~~~~~^~~~~~~~~~~~~~~
2022-06-25T15:09:34,457   src/nepy/nep.cpp:1458:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,457    1458 |   if (N * 9 != virial.size()) {
2022-06-25T15:09:34,458         |       ~~~~~~^~~~~~~~~~~~~~~~
2022-06-25T15:09:34,459   src/nepy/nep.cpp:1465:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,460    1465 |   for (int n = 0; n < potential.size(); ++n) {
2022-06-25T15:09:34,460         |                   ~~^~~~~~~~~~~~~~~~~~
2022-06-25T15:09:34,460   src/nepy/nep.cpp:1468:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,461    1468 |   for (int n = 0; n < force.size(); ++n) {
2022-06-25T15:09:34,461         |                   ~~^~~~~~~~~~~~~~
2022-06-25T15:09:34,461   src/nepy/nep.cpp:1471:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,462    1471 |   for (int n = 0; n < virial.size(); ++n) {
2022-06-25T15:09:34,462         |                   ~~^~~~~~~~~~~~~~~
2022-06-25T15:09:34,469   src/nepy/nep.cpp: In member function ‘void NEP3::find_descriptor(const std::vector<int>&, const std::vector<double>&, const std::vector<double>&, std::vector<double>&)’:
2022-06-25T15:09:34,469   src/nepy/nep.cpp:1512:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,470    1512 |   if (N * 3 != position.size()) {
2022-06-25T15:09:34,470         |       ~~~~~~^~~~~~~~~~~~~~~~~~
2022-06-25T15:09:34,471   src/nepy/nep.cpp:1516:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-06-25T15:09:34,471    1516 |   if (N * annmb.dim != descriptor.size()) {
2022-06-25T15:09:34,471         |       ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
2022-06-25T15:09:59,813   src/nepy/nep.cpp: In function ‘void {anonymous}::find_force_angular_small_box(NEP3::ParaMB, NEP3::ANN, int, const int*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, double*, double*, double*, double*)’:
2022-06-25T15:09:59,814   src/nepy/nep.cpp:211:14: warning: ‘t2’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-06-25T15:09:59,814     211 |     fn = (t2 + 1.0) * 0.5;
2022-06-25T15:09:59,814         |          ~~~~^~~~~~
2022-06-25T15:09:59,815   src/nepy/nep.cpp:199:12: note: ‘t2’ was declared here
2022-06-25T15:09:59,815     199 |     double t2;
2022-06-25T15:09:59,815         |            ^~
2022-06-25T15:10:03,627   src/nepy/nep.cpp: In function ‘void {anonymous}::find_descriptor_small_box(bool, NEP3::ParaMB, NEP3::ANN, int, const int*, const int*, const int*, const int*, const int*, const double*, const double*, const double*, const double*, const double*, const double*, double*, double*, double*)’:
2022-06-25T15:10:03,628   src/nepy/nep.cpp:174:14: warning: ‘t2’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-06-25T15:10:03,628     174 |     fn = (t2 + 1.0) * 0.5 * fc12;
2022-06-25T15:10:03,629         |          ~~~~^~~~~~
2022-06-25T15:10:03,629   src/nepy/nep.cpp:168:12: note: ‘t2’ was declared here
2022-06-25T15:10:03,629     168 |     double t2;
2022-06-25T15:10:03,630         |            ^~
2022-06-25T15:10:52,466   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/nepy/nepy.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/_nepy.cpython-39-arm-linux-gnueabihf.so -DVERSION_INFO='1.1' -std=c++14 -O3 -fvisibility=hidden
2022-06-25T15:10:54,362   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-06-25T15:10:54,363     warnings.warn(
2022-06-25T15:10:55,002   installing to build/bdist.linux-armv7l/wheel
2022-06-25T15:10:55,003   running install
2022-06-25T15:10:55,066   running install_lib
2022-06-25T15:10:55,707   creating build/bdist.linux-armv7l
2022-06-25T15:10:55,708   creating build/bdist.linux-armv7l/wheel
2022-06-25T15:10:55,711   creating build/bdist.linux-armv7l/wheel/calorine
2022-06-25T15:10:55,713   copying build/lib.linux-armv7l-cpython-39/calorine/data_analysis.py -> build/bdist.linux-armv7l/wheel/calorine
2022-06-25T15:10:55,718   creating build/bdist.linux-armv7l/wheel/calorine/nepy
2022-06-25T15:10:55,720   copying build/lib.linux-armv7l-cpython-39/calorine/nepy/cpunep_calculator.py -> build/bdist.linux-armv7l/wheel/calorine/nepy
2022-06-25T15:10:55,724   copying build/lib.linux-armv7l-cpython-39/calorine/nepy/nep.py -> build/bdist.linux-armv7l/wheel/calorine/nepy
2022-06-25T15:10:55,729   copying build/lib.linux-armv7l-cpython-39/calorine/nepy/__init__.py -> build/bdist.linux-armv7l/wheel/calorine/nepy
2022-06-25T15:10:55,732   copying build/lib.linux-armv7l-cpython-39/calorine/analysis.py -> build/bdist.linux-armv7l/wheel/calorine
2022-06-25T15:10:55,737   copying build/lib.linux-armv7l-cpython-39/calorine/gpunep_calculator.py -> build/bdist.linux-armv7l/wheel/calorine
2022-06-25T15:10:55,742   copying build/lib.linux-armv7l-cpython-39/calorine/__init__.py -> build/bdist.linux-armv7l/wheel/calorine
2022-06-25T15:10:55,746   copying build/lib.linux-armv7l-cpython-39/calorine/io.py -> build/bdist.linux-armv7l/wheel/calorine
2022-06-25T15:10:55,752   copying build/lib.linux-armv7l-cpython-39/_nepy.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2022-06-25T15:10:55,957   running install_egg_info
2022-06-25T15:10:57,269   running egg_info
2022-06-25T15:10:57,905   writing calorine.egg-info/PKG-INFO
2022-06-25T15:10:58,468   writing dependency_links to calorine.egg-info/dependency_links.txt
2022-06-25T15:11:01,266   writing requirements to calorine.egg-info/requires.txt
2022-06-25T15:11:01,827   writing top-level names to calorine.egg-info/top_level.txt
2022-06-25T15:11:01,913   reading manifest file 'calorine.egg-info/SOURCES.txt'
2022-06-25T15:11:01,962   writing manifest file 'calorine.egg-info/SOURCES.txt'
2022-06-25T15:11:01,965   Copying calorine.egg-info to build/bdist.linux-armv7l/wheel/calorine-1.1-py3.9.egg-info
2022-06-25T15:11:01,988   running install_scripts
2022-06-25T15:11:02,221   creating build/bdist.linux-armv7l/wheel/calorine-1.1.dist-info/WHEEL
2022-06-25T15:11:02,226   creating '/tmp/pip-wheel-r1lc__h3/calorine-1.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-06-25T15:11:03,619   adding '_nepy.cpython-39-arm-linux-gnueabihf.so'
2022-06-25T15:11:03,699   adding 'calorine/__init__.py'
2022-06-25T15:11:03,703   adding 'calorine/analysis.py'
2022-06-25T15:11:03,706   adding 'calorine/data_analysis.py'
2022-06-25T15:11:03,710   adding 'calorine/gpunep_calculator.py'
2022-06-25T15:11:03,717   adding 'calorine/io.py'
2022-06-25T15:11:03,721   adding 'calorine/nepy/__init__.py'
2022-06-25T15:11:03,724   adding 'calorine/nepy/cpunep_calculator.py'
2022-06-25T15:11:03,728   adding 'calorine/nepy/nep.py'
2022-06-25T15:11:03,732   adding 'calorine-1.1.dist-info/METADATA'
2022-06-25T15:11:03,733   adding 'calorine-1.1.dist-info/WHEEL'
2022-06-25T15:11:03,735   adding 'calorine-1.1.dist-info/top_level.txt'
2022-06-25T15:11:03,737   adding 'calorine-1.1.dist-info/RECORD'
2022-06-25T15:11:03,783   removing build/bdist.linux-armv7l/wheel
2022-06-25T15:11:04,055   Building wheel for calorine (setup.py): finished with status 'done'
2022-06-25T15:11:04,098   Created wheel for calorine: filename=calorine-1.1-cp39-cp39-linux_armv7l.whl size=1161878 sha256=5c00ade16905a545571aed57f971200d98887fab563d4c5c7b9676915ec2aceb
2022-06-25T15:11:04,101   Stored in directory: /tmp/pip-ephem-wheel-cache-k_np5jz1/wheels/a7/12/98/dbcd32c24917b034ac22a212e41551f0dd6c648c93398e3fde
2022-06-25T15:11:04,123 Successfully built calorine
2022-06-25T15:11:04,217 Removed build tracker: '/tmp/pip-build-tracker-u0u0m24t'