2022-06-28T16:04:48,655 Created temporary directory: /tmp/pip-ephem-wheel-cache-oyoiry01
2022-06-28T16:04:48,661 Created temporary directory: /tmp/pip-build-tracker-o6f5092u
2022-06-28T16:04:48,661 Initialized build tracking at /tmp/pip-build-tracker-o6f5092u
2022-06-28T16:04:48,662 Created build tracker: /tmp/pip-build-tracker-o6f5092u
2022-06-28T16:04:48,662 Entered build tracker: /tmp/pip-build-tracker-o6f5092u
2022-06-28T16:04:48,663 Created temporary directory: /tmp/pip-wheel-vg8hpypa
2022-06-28T16:04:48,734 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-06-28T16:04:48,742 2 location(s) to search for versions of metawibele:
2022-06-28T16:04:48,742 * https://pypi.org/simple/metawibele/
2022-06-28T16:04:48,742 * https://www.piwheels.org/simple/metawibele/
2022-06-28T16:04:48,743 Fetching project page and analyzing links: https://pypi.org/simple/metawibele/
2022-06-28T16:04:48,744 Getting page https://pypi.org/simple/metawibele/
2022-06-28T16:04:48,747 Found index url https://pypi.org/simple
2022-06-28T16:04:48,938   Found link https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 (from https://pypi.org/simple/metawibele/), version: 0.3.5
2022-06-28T16:04:48,939   Found link https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 (from https://pypi.org/simple/metawibele/), version: 0.3.6
2022-06-28T16:04:48,940   Found link https://files.pythonhosted.org/packages/7c/19/af84f2863d296edd894ff917a516fabb124e1921b4ca6d5bc9fa0fffb969/metawibele-0.3.7.tar.gz#sha256=26607eb78cf3bf472f5dc45577bab9db80764ee5f08482a18feb2f235e1403b0 (from https://pypi.org/simple/metawibele/), version: 0.3.7
2022-06-28T16:04:48,941   Found link https://files.pythonhosted.org/packages/c4/35/1d22d02f5576d1aa6f5e8c82ad8ff231d9e1364c56e10554cff9dab80dc0/metawibele-0.3.8.tar.gz#sha256=6b3aa05104b5be76014d82a9ff92439ba798a9e3be501fac37b5276d05e27a8d (from https://pypi.org/simple/metawibele/), version: 0.3.8
2022-06-28T16:04:48,942   Found link https://files.pythonhosted.org/packages/18/0d/c428068b3d096abb30df35c000895ae8738330312be3155e98c22b699b5c/metawibele-0.3.8.1.tar.gz#sha256=07c88fb709530bacdd77548eb7c619292349de4ccd2b82861519c0320cfd2707 (from https://pypi.org/simple/metawibele/), version: 0.3.8.1
2022-06-28T16:04:48,943   Skipping link: No binaries permitted for metawibele: https://files.pythonhosted.org/packages/ab/ce/00f6b75e334842a289899dab3b4f82f76617682dc84dcc369968f01ce1d3/metawibele-0.4.2-py3-none-any.whl#sha256=a8ff4c085d449abeca86ab3317e0e337899f9d2c343386f05bd0598dbc958a80 (from https://pypi.org/simple/metawibele/)
2022-06-28T16:04:48,943   Found link https://files.pythonhosted.org/packages/08/0f/c88b89605f54653cb844b33a11db8f28062784f4c6fb239f6f453160c6e1/metawibele-0.4.2.tar.gz#sha256=67c86605cc3f34249d33d3eb9fea35bdeb94b562b2be1d3c2c047b0945214d14 (from https://pypi.org/simple/metawibele/), version: 0.4.2
2022-06-28T16:04:48,944   Skipping link: No binaries permitted for metawibele: https://files.pythonhosted.org/packages/90/ab/12be30a49002f83196d21e5c4bdce8b4225174dc35c61292443ebd5214c8/metawibele-0.4.4-py3-none-any.whl#sha256=943f821d256575150262e498b8e1119406f128679f99263d640a189914a2c9a4 (from https://pypi.org/simple/metawibele/)
2022-06-28T16:04:48,944   Found link https://files.pythonhosted.org/packages/ec/b5/1d91e306ea9b2cce23ecfb0ab29492bce93756858f3004e60483fa44878e/metawibele-0.4.4.tar.gz#sha256=64eb49d8bbad741691a0dcf1caa2ae37e3b910cea686a19b3eac6939c7b1aecd (from https://pypi.org/simple/metawibele/), version: 0.4.4
2022-06-28T16:04:48,945   Found link https://files.pythonhosted.org/packages/83/b0/18a6cced507457a008ccedbec22807ce62887da2581ad8403bdd5079a484/metawibele-0.4.5.tar.gz#sha256=5a4845e13300932fd3351f81ee53d38b925b78d74122a36c6579bba4516f85db (from https://pypi.org/simple/metawibele/), version: 0.4.5
2022-06-28T16:04:48,946 Fetching project page and analyzing links: https://www.piwheels.org/simple/metawibele/
2022-06-28T16:04:48,947 Getting page https://www.piwheels.org/simple/metawibele/
2022-06-28T16:04:48,949 Found index url https://www.piwheels.org/simple
2022-06-28T16:04:49,163   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.4.4-py3-none-any.whl#sha256=5885c288c7e5e51195aa1a8047d469baf52a37367f9fb2e8ce96c93d0d678ddd (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,163   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.4.2-py3-none-any.whl#sha256=d4a783aa655cb02ed40fe46ee54ced29e34fe8b5fe7e61339dfaf8174cd6153b (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,164   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.3.8.1-py3-none-any.whl#sha256=3aec339ab17bf253203dd089f09472a4097c2eef98937a16ded9023b196f757c (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,164   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.3.8-py3-none-any.whl#sha256=24bd645d52d57f0b4c26fbb00aef3c88337c65a659c6446727dfbe72fc6447ac (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,165   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.3.7-py3-none-any.whl#sha256=b56669f31a78a05ed5401ac62e468a48e63ecc63dc4931cf2a55c3b6987a50ad (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,165   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.3.6-py3-none-any.whl#sha256=03b55d9f46bd54f37123113aea5c00299a9ed72cc564bd0638ffd79634f31927 (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,166   Skipping link: No binaries permitted for metawibele: https://www.piwheels.org/simple/metawibele/metawibele-0.3.5-py3-none-any.whl#sha256=095d16bf0df2c8f7e8bc1a2f938b4ecc0f3a0fa8cf1b45726e57058fec015503 (from https://www.piwheels.org/simple/metawibele/)
2022-06-28T16:04:49,167 Skipping link: not a file: https://www.piwheels.org/simple/metawibele/
2022-06-28T16:04:49,167 Skipping link: not a file: https://pypi.org/simple/metawibele/
2022-06-28T16:04:49,210 Given no hashes to check 1 links for project 'metawibele': discarding no candidates
2022-06-28T16:04:49,241 Collecting metawibele==0.4.5
2022-06-28T16:04:49,245   Created temporary directory: /tmp/pip-unpack-qt9e5_d7
2022-06-28T16:04:49,336   Downloading metawibele-0.4.5.tar.gz (93.3 MB)
2022-06-28T16:05:20,385   Added metawibele==0.4.5 from https://files.pythonhosted.org/packages/83/b0/18a6cced507457a008ccedbec22807ce62887da2581ad8403bdd5079a484/metawibele-0.4.5.tar.gz#sha256=5a4845e13300932fd3351f81ee53d38b925b78d74122a36c6579bba4516f85db to build tracker '/tmp/pip-build-tracker-o6f5092u'
2022-06-28T16:05:20,388   Running setup.py (path:/tmp/pip-wheel-vg8hpypa/metawibele_e2d1f7b1c8ee48a180765c8835ba8d8f/setup.py) egg_info for package metawibele
2022-06-28T16:05:20,390   Created temporary directory: /tmp/pip-pip-egg-info-baidjotf
2022-06-28T16:05:20,390   Preparing metadata (setup.py): started
2022-06-28T16:05:20,392   Running command python setup.py egg_info
2022-06-28T16:05:27,761   running egg_info
2022-06-28T16:05:27,766   creating /tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info
2022-06-28T16:05:28,464   writing /tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/PKG-INFO
2022-06-28T16:05:29,055   writing dependency_links to /tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/dependency_links.txt
2022-06-28T16:05:30,834   writing entry points to /tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/entry_points.txt
2022-06-28T16:05:32,605   writing top-level names to /tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/top_level.txt
2022-06-28T16:05:32,609   writing manifest file '/tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/SOURCES.txt'
2022-06-28T16:05:33,683   reading manifest file '/tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/SOURCES.txt'
2022-06-28T16:05:33,686   reading manifest template 'MANIFEST.in'
2022-06-28T16:05:33,689   warning: no files found matching 'readme.md'
2022-06-28T16:05:33,737   adding license file 'LICENSE'
2022-06-28T16:05:33,756   writing manifest file '/tmp/pip-pip-egg-info-baidjotf/metawibele.egg-info/SOURCES.txt'
2022-06-28T16:05:33,982   Preparing metadata (setup.py): finished with status 'done'
2022-06-28T16:05:33,993   Source in /tmp/pip-wheel-vg8hpypa/metawibele_e2d1f7b1c8ee48a180765c8835ba8d8f has version 0.4.5, which satisfies requirement metawibele==0.4.5 from https://files.pythonhosted.org/packages/83/b0/18a6cced507457a008ccedbec22807ce62887da2581ad8403bdd5079a484/metawibele-0.4.5.tar.gz#sha256=5a4845e13300932fd3351f81ee53d38b925b78d74122a36c6579bba4516f85db
2022-06-28T16:05:33,995   Removed metawibele==0.4.5 from https://files.pythonhosted.org/packages/83/b0/18a6cced507457a008ccedbec22807ce62887da2581ad8403bdd5079a484/metawibele-0.4.5.tar.gz#sha256=5a4845e13300932fd3351f81ee53d38b925b78d74122a36c6579bba4516f85db from build tracker '/tmp/pip-build-tracker-o6f5092u'
2022-06-28T16:05:34,004 Created temporary directory: /tmp/pip-unpack-71infyay
2022-06-28T16:05:34,005 Building wheels for collected packages: metawibele
2022-06-28T16:05:34,014   Created temporary directory: /tmp/pip-wheel-5ljk3fo8
2022-06-28T16:05:34,015   Building wheel for metawibele (setup.py): started
2022-06-28T16:05:34,017   Destination directory: /tmp/pip-wheel-5ljk3fo8
2022-06-28T16:05:34,017   Running command python setup.py bdist_wheel
2022-06-28T16:05:40,668   running bdist_wheel
2022-06-28T16:05:40,992   running build
2022-06-28T16:05:40,993   running build_py
2022-06-28T16:05:41,675   creating build
2022-06-28T16:05:41,676   creating build/lib
2022-06-28T16:05:41,677   creating build/lib/metawibele
2022-06-28T16:05:41,679   copying metawibele/config.py -> build/lib/metawibele
2022-06-28T16:05:41,685   copying metawibele/utilities.py -> build/lib/metawibele
2022-06-28T16:05:41,690   copying metawibele/__init__.py -> build/lib/metawibele
2022-06-28T16:05:41,693   copying metawibele/metawibele.py -> build/lib/metawibele
2022-06-28T16:05:41,696   copying metawibele/check.py -> build/lib/metawibele
2022-06-28T16:05:41,702   creating build/lib/metawibele/prioritize
2022-06-28T16:05:41,703   copying metawibele/prioritize/quantify_prioritization.py -> build/lib/metawibele/prioritize
2022-06-28T16:05:41,709   copying metawibele/prioritize/filter_prioritization.py -> build/lib/metawibele/prioritize
2022-06-28T16:05:41,713   copying metawibele/prioritize/__init__.py -> build/lib/metawibele/prioritize
2022-06-28T16:05:41,716   copying metawibele/prioritize/finalize_prioritization.py -> build/lib/metawibele/prioritize
2022-06-28T16:05:41,722   creating build/lib/metawibele/tasks
2022-06-28T16:05:41,724   copying metawibele/tasks/__init__.py -> build/lib/metawibele/tasks
2022-06-28T16:05:41,727   copying metawibele/tasks/prioritization.py -> build/lib/metawibele/tasks
2022-06-28T16:05:41,732   copying metawibele/tasks/characterization.py -> build/lib/metawibele/tasks
2022-06-28T16:05:41,745   creating build/lib/metawibele/characterize
2022-06-28T16:05:41,747   copying metawibele/characterize/summary_all_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,752   copying metawibele/characterize/maaslin2_annotator.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,757   copying metawibele/characterize/interproscan_annotator.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,761   copying metawibele/characterize/psortb_annotator.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,766   copying metawibele/characterize/maaslin2_summary.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,771   copying metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,776   copying metawibele/characterize/summary_protein_uniref_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,782   copying metawibele/characterize/maaslin2.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,787   copying metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,792   copying metawibele/characterize/uniref_annotator.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,796   copying metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,801   copying metawibele/characterize/finalize_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,806   copying metawibele/characterize/pfam2go.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,811   copying metawibele/characterize/msp_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,816   copying metawibele/characterize/uniref_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,821   copying metawibele/characterize/ddi_DOMINE_protein.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,826   copying metawibele/characterize/interproscan_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,831   copying metawibele/characterize/__init__.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,834   copying metawibele/characterize/interproscan_protein.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,839   copying metawibele/characterize/ddi_DOMINE_ann.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,843   copying metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,848   copying metawibele/characterize/psortb_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,853   copying metawibele/characterize/maaslin2_collection.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,857   copying metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,861   copying metawibele/characterize/interproscan_signalp_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,865   copying metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,869   copying metawibele/characterize/mspminer_msp.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,872   copying metawibele/characterize/interproscan_phobius_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,877   copying metawibele/characterize/utils.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,881   copying metawibele/characterize/denovo_TM_SP.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,886   copying metawibele/characterize/psortb_protein.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,890   copying metawibele/characterize/uniref_annotator_stat.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,895   copying metawibele/characterize/mspminer_protein.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,900   copying metawibele/characterize/sum_to_protein_family_abundance.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,904   copying metawibele/characterize/abundance_annotator.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,909   copying metawibele/characterize/uniref_protein.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,913   copying metawibele/characterize/metadata_format.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,917   copying metawibele/characterize/interproscan_pfam_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,920   copying metawibele/characterize/summary_function_annotation.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,925   copying metawibele/characterize/mspminer_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,929   copying metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,934   copying metawibele/characterize/ddi_DOMINE_protein_family.py -> build/lib/metawibele/characterize
2022-06-28T16:05:41,942   creating build/lib/metawibele/common
2022-06-28T16:05:41,944   copying metawibele/common/abundance_normalization.py -> build/lib/metawibele/common
2022-06-28T16:05:41,949   copying metawibele/common/filter_clusters.py -> build/lib/metawibele/common
2022-06-28T16:05:41,953   copying metawibele/common/prepare_uniprot_annotation.py -> build/lib/metawibele/common
2022-06-28T16:05:41,957   copying metawibele/common/abundance_RPK.py -> build/lib/metawibele/common
2022-06-28T16:05:41,961   copying metawibele/common/filter_prevalence.py -> build/lib/metawibele/common
2022-06-28T16:05:41,964   copying metawibele/common/combine_abundance_annotation.py -> build/lib/metawibele/common
2022-06-28T16:05:41,968   copying metawibele/common/join_family_abundance.py -> build/lib/metawibele/common
2022-06-28T16:05:41,972   copying metawibele/common/abundance_smoothing.py -> build/lib/metawibele/common
2022-06-28T16:05:41,975   copying metawibele/common/__init__.py -> build/lib/metawibele/common
2022-06-28T16:05:41,978   copying metawibele/common/extract_abundance_feature_subset.py -> build/lib/metawibele/common
2022-06-28T16:05:41,981   copying metawibele/common/prepare_uniprot_taxonomy.py -> build/lib/metawibele/common
2022-06-28T16:05:41,985   copying metawibele/common/split_family_abundance.py -> build/lib/metawibele/common
2022-06-28T16:05:41,988   copying metawibele/common/extract_abundance_sample_subset.py -> build/lib/metawibele/common
2022-06-28T16:05:41,991   copying metawibele/common/prepare_uniref_annotation.py -> build/lib/metawibele/common
2022-06-28T16:05:41,995   copying metawibele/common/split_fasta_file.py -> build/lib/metawibele/common
2022-06-28T16:05:41,999   copying metawibele/common/utils.py -> build/lib/metawibele/common
2022-06-28T16:05:42,002   copying metawibele/common/transpose.py -> build/lib/metawibele/common
2022-06-28T16:05:42,006   copying metawibele/common/download_config_file.py -> build/lib/metawibele/common
2022-06-28T16:05:42,010   copying metawibele/common/extract_uniprot_pfam.py -> build/lib/metawibele/common
2022-06-28T16:05:42,014   copying metawibele/common/download_database.py -> build/lib/metawibele/common
2022-06-28T16:05:42,018   copying metawibele/common/abundance_filtering.py -> build/lib/metawibele/common
2022-06-28T16:05:42,022   copying metawibele/common/check_install.py -> build/lib/metawibele/common
2022-06-28T16:05:42,026   copying metawibele/common/prepare_domain_databases.py -> build/lib/metawibele/common
2022-06-28T16:05:42,032   creating build/lib/metawibele/tools
2022-06-28T16:05:42,034   copying metawibele/tools/format_protein_sequences.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,038   copying metawibele/tools/combine_gene_sequences.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,042   copying metawibele/tools/extract_non_redundance_seq.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,045   copying metawibele/tools/format_contig_sequences.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,049   copying metawibele/tools/extract_cluster_CD_hit.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,053   copying metawibele/tools/gene_abundance_indexRef.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,056   copying metawibele/tools/__init__.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,059   copying metawibele/tools/gene_catalog_abundance.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,064   copying metawibele/tools/extract_protein_coding_genes.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,067   copying metawibele/tools/extract_complete_ORF_seq.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,071   copying metawibele/tools/preprocessing_tasks.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,076   copying metawibele/tools/gene_abundance.py -> build/lib/metawibele/tools
2022-06-28T16:05:42,101   creating build/lib/metawibele/workflows
2022-06-28T16:05:42,103   copying metawibele/workflows/preprocess.py -> build/lib/metawibele/workflows
2022-06-28T16:05:42,108   copying metawibele/workflows/prioritize.py -> build/lib/metawibele/workflows
2022-06-28T16:05:42,112   copying metawibele/workflows/characterize.py -> build/lib/metawibele/workflows
2022-06-28T16:05:42,117   creating build/lib/metawibele/configs
2022-06-28T16:05:42,118   copying metawibele/configs/characterization.cfg -> build/lib/metawibele/configs
2022-06-28T16:05:42,122   copying metawibele/configs/metawibele.cfg -> build/lib/metawibele/configs
2022-06-28T16:05:42,127   copying metawibele/configs/prioritization.cfg -> build/lib/metawibele/configs
2022-06-28T16:05:42,131   copying metawibele/configs/MSPminer_setting.cfg -> build/lib/metawibele/configs
2022-06-28T16:05:42,134   creating build/lib/metawibele/data
2022-06-28T16:05:42,135   creating build/lib/metawibele/data/domain
2022-06-28T16:05:42,137   copying metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,148   copying metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,159   copying metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,172   copying metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,288   copying metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,301   copying metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,307   copying metawibele/data/domain/pfam_descriptions.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,323   copying metawibele/data/domain/README.txt -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,327   copying metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:42,339   copying metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:43,515   copying metawibele/data/domain/gene_ontology.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:43,525   copying metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:43,539   copying metawibele/data/domain/INTERACTION.txt.gz -> build/lib/metawibele/data/domain
2022-06-28T16:05:43,550   creating build/lib/metawibele/data/uniref
2022-06-28T16:05:43,551   copying metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:43,557   copying metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:43,660   copying metawibele/data/uniref/map_TaxID_uniref90.demo.txt.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:43,895   copying metawibele/data/uniref/uniref90.demo.fasta.dmnd -> build/lib/metawibele/data/uniref
2022-06-28T16:05:43,934   copying metawibele/data/uniref/map_Rep_TaxID_uniref90.demo.txt.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:44,030   copying metawibele/data/uniref/README.txt -> build/lib/metawibele/data/uniref
2022-06-28T16:05:44,034   copying metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:45,672   copying metawibele/data/uniref/map_Tax_uniref90.demo.txt.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:45,850   copying metawibele/data/uniref/map_Rep_Tax_uniref90.demo.txt.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:45,947   copying metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/lib/metawibele/data/uniref
2022-06-28T16:05:46,060   creating build/lib/metawibele/data/misc
2022-06-28T16:05:46,061   copying metawibele/data/misc/vignette_function.tsv -> build/lib/metawibele/data/misc
2022-06-28T16:05:46,065   creating build/lib/metawibele/Rscripts
2022-06-28T16:05:46,067   copying metawibele/Rscripts/pcl_utils.R -> build/lib/metawibele/Rscripts
2022-06-28T16:05:46,074   copying metawibele/Rscripts/maaslin2_utils.R -> build/lib/metawibele/Rscripts
2022-06-28T16:05:46,095   running build_scripts
2022-06-28T16:05:46,096   creating build/scripts-3.7
2022-06-28T16:05:46,098   copying and adjusting metawibele/workflows/preprocess.py -> build/scripts-3.7
2022-06-28T16:05:46,102   copying and adjusting metawibele/workflows/prioritize.py -> build/scripts-3.7
2022-06-28T16:05:46,106   copying and adjusting metawibele/workflows/characterize.py -> build/scripts-3.7
2022-06-28T16:05:46,110   changing mode of build/scripts-3.7/preprocess.py from 644 to 755
2022-06-28T16:05:46,111   changing mode of build/scripts-3.7/prioritize.py from 644 to 755
2022-06-28T16:05:46,111   changing mode of build/scripts-3.7/characterize.py from 644 to 755
2022-06-28T16:05:46,799   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-06-28T16:05:46,799     setuptools.SetuptoolsDeprecationWarning,
2022-06-28T16:05:47,490   installing to build/bdist.linux-armv7l/wheel
2022-06-28T16:05:47,491   running install
2022-06-28T16:05:47,552   running install_lib
2022-06-28T16:05:48,246   creating build/bdist.linux-armv7l
2022-06-28T16:05:48,247   creating build/bdist.linux-armv7l/wheel
2022-06-28T16:05:48,250   creating build/bdist.linux-armv7l/wheel/metawibele
2022-06-28T16:05:48,252   copying build/lib/metawibele/config.py -> build/bdist.linux-armv7l/wheel/metawibele
2022-06-28T16:05:48,258   creating build/bdist.linux-armv7l/wheel/metawibele/prioritize
2022-06-28T16:05:48,260   copying build/lib/metawibele/prioritize/quantify_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize
2022-06-28T16:05:48,265   copying build/lib/metawibele/prioritize/filter_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize
2022-06-28T16:05:48,270   copying build/lib/metawibele/prioritize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize
2022-06-28T16:05:48,273   copying build/lib/metawibele/prioritize/finalize_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize
2022-06-28T16:05:48,278   creating build/bdist.linux-armv7l/wheel/metawibele/tasks
2022-06-28T16:05:48,279   copying build/lib/metawibele/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks
2022-06-28T16:05:48,282   copying build/lib/metawibele/tasks/prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks
2022-06-28T16:05:48,286   copying build/lib/metawibele/tasks/characterization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks
2022-06-28T16:05:48,295   creating build/bdist.linux-armv7l/wheel/metawibele/workflows
2022-06-28T16:05:48,297   copying build/lib/metawibele/workflows/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows
2022-06-28T16:05:48,301   copying build/lib/metawibele/workflows/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows
2022-06-28T16:05:48,305   copying build/lib/metawibele/workflows/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows
2022-06-28T16:05:48,310   copying build/lib/metawibele/utilities.py -> build/bdist.linux-armv7l/wheel/metawibele
2022-06-28T16:05:48,318   creating build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,319   copying build/lib/metawibele/characterize/summary_all_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,324   copying build/lib/metawibele/characterize/maaslin2_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,328   copying build/lib/metawibele/characterize/interproscan_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,332   copying build/lib/metawibele/characterize/psortb_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,336   copying build/lib/metawibele/characterize/maaslin2_summary.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,341   copying build/lib/metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,345   copying build/lib/metawibele/characterize/summary_protein_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,349   copying build/lib/metawibele/characterize/maaslin2.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,353   copying build/lib/metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,358   copying build/lib/metawibele/characterize/uniref_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,362   copying build/lib/metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,367   copying build/lib/metawibele/characterize/finalize_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,372   copying build/lib/metawibele/characterize/pfam2go.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,376   copying build/lib/metawibele/characterize/msp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,380   copying build/lib/metawibele/characterize/uniref_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,385   copying build/lib/metawibele/characterize/ddi_DOMINE_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,389   copying build/lib/metawibele/characterize/interproscan_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,393   copying build/lib/metawibele/characterize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,396   copying build/lib/metawibele/characterize/interproscan_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,400   copying build/lib/metawibele/characterize/ddi_DOMINE_ann.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,404   copying build/lib/metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,409   copying build/lib/metawibele/characterize/psortb_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,414   copying build/lib/metawibele/characterize/maaslin2_collection.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,419   copying build/lib/metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,423   copying build/lib/metawibele/characterize/interproscan_signalp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,427   copying build/lib/metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,431   copying build/lib/metawibele/characterize/mspminer_msp.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,435   copying build/lib/metawibele/characterize/interproscan_phobius_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,439   copying build/lib/metawibele/characterize/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,443   copying build/lib/metawibele/characterize/denovo_TM_SP.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,447   copying build/lib/metawibele/characterize/psortb_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,451   copying build/lib/metawibele/characterize/uniref_annotator_stat.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,455   copying build/lib/metawibele/characterize/mspminer_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,459   copying build/lib/metawibele/characterize/sum_to_protein_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,463   copying build/lib/metawibele/characterize/abundance_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,467   copying build/lib/metawibele/characterize/uniref_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,471   copying build/lib/metawibele/characterize/metadata_format.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,474   copying build/lib/metawibele/characterize/interproscan_pfam_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,478   copying build/lib/metawibele/characterize/summary_function_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,483   copying build/lib/metawibele/characterize/mspminer_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,487   copying build/lib/metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,491   copying build/lib/metawibele/characterize/ddi_DOMINE_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize
2022-06-28T16:05:48,496   copying build/lib/metawibele/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele
2022-06-28T16:05:48,499   creating build/bdist.linux-armv7l/wheel/metawibele/configs
2022-06-28T16:05:48,501   copying build/lib/metawibele/configs/characterization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs
2022-06-28T16:05:48,505   copying build/lib/metawibele/configs/metawibele.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs
2022-06-28T16:05:48,509   copying build/lib/metawibele/configs/prioritization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs
2022-06-28T16:05:48,513   copying build/lib/metawibele/configs/MSPminer_setting.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs
2022-06-28T16:05:48,517   copying build/lib/metawibele/metawibele.py -> build/bdist.linux-armv7l/wheel/metawibele
2022-06-28T16:05:48,523   creating build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,525   copying build/lib/metawibele/common/abundance_normalization.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,529   copying build/lib/metawibele/common/filter_clusters.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,534   copying build/lib/metawibele/common/prepare_uniprot_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,538   copying build/lib/metawibele/common/abundance_RPK.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,543   copying build/lib/metawibele/common/filter_prevalence.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,547   copying build/lib/metawibele/common/combine_abundance_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,551   copying build/lib/metawibele/common/join_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,555   copying build/lib/metawibele/common/abundance_smoothing.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,559   copying build/lib/metawibele/common/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,562   copying build/lib/metawibele/common/extract_abundance_feature_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,565   copying build/lib/metawibele/common/prepare_uniprot_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,569   copying build/lib/metawibele/common/split_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,573   copying build/lib/metawibele/common/extract_abundance_sample_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,577   copying build/lib/metawibele/common/prepare_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,582   copying build/lib/metawibele/common/split_fasta_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,586   copying build/lib/metawibele/common/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,591   copying build/lib/metawibele/common/transpose.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,595   copying build/lib/metawibele/common/download_config_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,599   copying build/lib/metawibele/common/extract_uniprot_pfam.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,615   copying build/lib/metawibele/common/download_database.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,619   copying build/lib/metawibele/common/abundance_filtering.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,624   copying build/lib/metawibele/common/check_install.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,628   copying build/lib/metawibele/common/prepare_domain_databases.py -> build/bdist.linux-armv7l/wheel/metawibele/common
2022-06-28T16:05:48,633   copying build/lib/metawibele/check.py -> build/bdist.linux-armv7l/wheel/metawibele
2022-06-28T16:05:48,638   creating build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,640   copying build/lib/metawibele/tools/format_protein_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,645   copying build/lib/metawibele/tools/combine_gene_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,650   copying build/lib/metawibele/tools/extract_non_redundance_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,654   copying build/lib/metawibele/tools/format_contig_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,657   copying build/lib/metawibele/tools/extract_cluster_CD_hit.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,662   copying build/lib/metawibele/tools/gene_abundance_indexRef.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,666   copying build/lib/metawibele/tools/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,669   copying build/lib/metawibele/tools/gene_catalog_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,673   copying build/lib/metawibele/tools/extract_protein_coding_genes.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,677   copying build/lib/metawibele/tools/extract_complete_ORF_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,681   copying build/lib/metawibele/tools/preprocessing_tasks.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,686   copying build/lib/metawibele/tools/gene_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools
2022-06-28T16:05:48,692   creating build/bdist.linux-armv7l/wheel/metawibele/Rscripts
2022-06-28T16:05:48,694   copying build/lib/metawibele/Rscripts/pcl_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts
2022-06-28T16:05:48,701   copying build/lib/metawibele/Rscripts/maaslin2_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts
2022-06-28T16:05:48,707   creating build/bdist.linux-armv7l/wheel/metawibele/data
2022-06-28T16:05:48,710   creating build/bdist.linux-armv7l/wheel/metawibele/data/misc
2022-06-28T16:05:48,712   copying build/lib/metawibele/data/misc/vignette_function.tsv -> build/bdist.linux-armv7l/wheel/metawibele/data/misc
2022-06-28T16:05:48,718   creating build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:48,720   copying build/lib/metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:48,725   copying build/lib/metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:48,827   copying build/lib/metawibele/data/uniref/map_TaxID_uniref90.demo.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:49,031   copying build/lib/metawibele/data/uniref/uniref90.demo.fasta.dmnd -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:49,070   copying build/lib/metawibele/data/uniref/map_Rep_TaxID_uniref90.demo.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:49,142   copying build/lib/metawibele/data/uniref/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:49,146   copying build/lib/metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:51,343   copying build/lib/metawibele/data/uniref/map_Tax_uniref90.demo.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:51,571   copying build/lib/metawibele/data/uniref/map_Rep_Tax_uniref90.demo.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:51,659   copying build/lib/metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref
2022-06-28T16:05:51,776   creating build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,777   copying build/lib/metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,788   copying build/lib/metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,798   copying build/lib/metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,811   copying build/lib/metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,927   copying build/lib/metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,936   copying build/lib/metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,941   copying build/lib/metawibele/data/domain/pfam_descriptions.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,961   copying build/lib/metawibele/data/domain/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,964   copying build/lib/metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:51,976   copying build/lib/metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:53,087   copying build/lib/metawibele/data/domain/gene_ontology.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:53,096   copying build/lib/metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:53,109   copying build/lib/metawibele/data/domain/INTERACTION.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain
2022-06-28T16:05:53,120   running install_egg_info
2022-06-28T16:05:54,517   running egg_info
2022-06-28T16:05:55,197   writing metawibele.egg-info/PKG-INFO
2022-06-28T16:05:55,780   writing dependency_links to metawibele.egg-info/dependency_links.txt
2022-06-28T16:05:57,532   writing entry points to metawibele.egg-info/entry_points.txt
2022-06-28T16:05:59,277   writing top-level names to metawibele.egg-info/top_level.txt
2022-06-28T16:05:59,445   reading manifest file 'metawibele.egg-info/SOURCES.txt'
2022-06-28T16:05:59,466   reading manifest template 'MANIFEST.in'
2022-06-28T16:05:59,468   warning: no files found matching 'readme.md'
2022-06-28T16:05:59,506   adding license file 'LICENSE'
2022-06-28T16:05:59,531   writing manifest file 'metawibele.egg-info/SOURCES.txt'
2022-06-28T16:05:59,534   Copying metawibele.egg-info to build/bdist.linux-armv7l/wheel/metawibele-0.4.5-py3.7.egg-info
2022-06-28T16:05:59,559   running install_scripts
2022-06-28T16:05:59,613   creating build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data
2022-06-28T16:05:59,614   creating build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts
2022-06-28T16:05:59,616   copying build/scripts-3.7/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts
2022-06-28T16:05:59,620   copying build/scripts-3.7/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts
2022-06-28T16:05:59,624   copying build/scripts-3.7/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts
2022-06-28T16:05:59,628   changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts/preprocess.py to 755
2022-06-28T16:05:59,629   changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts/prioritize.py to 755
2022-06-28T16:05:59,629   changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.4.5.data/scripts/characterize.py to 755
2022-06-28T16:05:59,661   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-06-28T16:05:59,669   creating build/bdist.linux-armv7l/wheel/metawibele-0.4.5.dist-info/WHEEL
2022-06-28T16:05:59,673   creating '/tmp/pip-wheel-5ljk3fo8/metawibele-0.4.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-06-28T16:05:59,678   adding 'metawibele/__init__.py'
2022-06-28T16:05:59,680   adding 'metawibele/check.py'
2022-06-28T16:05:59,687   adding 'metawibele/config.py'
2022-06-28T16:05:59,690   adding 'metawibele/metawibele.py'
2022-06-28T16:05:59,699   adding 'metawibele/utilities.py'
2022-06-28T16:05:59,703   adding 'metawibele/Rscripts/maaslin2_utils.R'
2022-06-28T16:05:59,719   adding 'metawibele/Rscripts/pcl_utils.R'
2022-06-28T16:05:59,724   adding 'metawibele/characterize/__init__.py'
2022-06-28T16:05:59,728   adding 'metawibele/characterize/abundance_annotator.py'
2022-06-28T16:05:59,732   adding 'metawibele/characterize/ddi_DOMINE_ExpAtlas.py'
2022-06-28T16:05:59,736   adding 'metawibele/characterize/ddi_DOMINE_SIFTS.py'
2022-06-28T16:05:59,740   adding 'metawibele/characterize/ddi_DOMINE_ann.py'
2022-06-28T16:05:59,744   adding 'metawibele/characterize/ddi_DOMINE_protein.py'
2022-06-28T16:05:59,748   adding 'metawibele/characterize/ddi_DOMINE_protein_family.py'
2022-06-28T16:05:59,752   adding 'metawibele/characterize/denovo_TM_SP.py'
2022-06-28T16:05:59,757   adding 'metawibele/characterize/finalize_annotation.py'
2022-06-28T16:05:59,760   adding 'metawibele/characterize/interproscan_annotator.py'
2022-06-28T16:05:59,764   adding 'metawibele/characterize/interproscan_pfam_protein_family.py'
2022-06-28T16:05:59,768   adding 'metawibele/characterize/interproscan_phobius_protein_family.py'
2022-06-28T16:05:59,772   adding 'metawibele/characterize/interproscan_protein.py'
2022-06-28T16:05:59,776   adding 'metawibele/characterize/interproscan_protein_family.py'
2022-06-28T16:05:59,780   adding 'metawibele/characterize/interproscan_signalp_protein_family.py'
2022-06-28T16:05:59,783   adding 'metawibele/characterize/interproscan_tmhmm_protein_family.py'
2022-06-28T16:05:59,787   adding 'metawibele/characterize/maaslin2.py'
2022-06-28T16:05:59,790   adding 'metawibele/characterize/maaslin2_annotator.py'
2022-06-28T16:05:59,796   adding 'metawibele/characterize/maaslin2_collection.py'
2022-06-28T16:05:59,801   adding 'metawibele/characterize/maaslin2_summary.py'
2022-06-28T16:05:59,804   adding 'metawibele/characterize/metadata_format.py'
2022-06-28T16:05:59,807   adding 'metawibele/characterize/msp_protein_family.py'
2022-06-28T16:05:59,811   adding 'metawibele/characterize/mspminer_msp.py'
2022-06-28T16:05:59,815   adding 'metawibele/characterize/mspminer_msp_taxonomy_annotation.py'
2022-06-28T16:05:59,818   adding 'metawibele/characterize/mspminer_msp_uniref_annotation.py'
2022-06-28T16:05:59,822   adding 'metawibele/characterize/mspminer_protein.py'
2022-06-28T16:05:59,827   adding 'metawibele/characterize/mspminer_protein_family.py'
2022-06-28T16:05:59,832   adding 'metawibele/characterize/mspminer_protein_family_taxonomy.py'
2022-06-28T16:05:59,836   adding 'metawibele/characterize/pfam2go.py'
2022-06-28T16:05:59,838   adding 'metawibele/characterize/psortb_annotator.py'
2022-06-28T16:05:59,841   adding 'metawibele/characterize/psortb_protein.py'
2022-06-28T16:05:59,846   adding 'metawibele/characterize/psortb_protein_family.py'
2022-06-28T16:05:59,849   adding 'metawibele/characterize/sum_to_protein_family_abundance.py'
2022-06-28T16:05:59,853   adding 'metawibele/characterize/summary_all_annotation.py'
2022-06-28T16:05:59,857   adding 'metawibele/characterize/summary_function_annotation.py'
2022-06-28T16:05:59,863   adding 'metawibele/characterize/summary_protein_family_uniref_annotation.py'
2022-06-28T16:05:59,868   adding 'metawibele/characterize/summary_protein_uniref_annotation.py'
2022-06-28T16:05:59,872   adding 'metawibele/characterize/uniref_annotator.py'
2022-06-28T16:05:59,876   adding 'metawibele/characterize/uniref_annotator_stat.py'
2022-06-28T16:05:59,880   adding 'metawibele/characterize/uniref_protein.py'
2022-06-28T16:05:59,886   adding 'metawibele/characterize/uniref_protein_family.py'
2022-06-28T16:05:59,889   adding 'metawibele/characterize/utils.py'
2022-06-28T16:05:59,893   adding 'metawibele/common/__init__.py'
2022-06-28T16:05:59,896   adding 'metawibele/common/abundance_RPK.py'
2022-06-28T16:05:59,899   adding 'metawibele/common/abundance_filtering.py'
2022-06-28T16:05:59,902   adding 'metawibele/common/abundance_normalization.py'
2022-06-28T16:05:59,906   adding 'metawibele/common/abundance_smoothing.py'
2022-06-28T16:05:59,910   adding 'metawibele/common/check_install.py'
2022-06-28T16:05:59,913   adding 'metawibele/common/combine_abundance_annotation.py'
2022-06-28T16:05:59,916   adding 'metawibele/common/download_config_file.py'
2022-06-28T16:05:59,919   adding 'metawibele/common/download_database.py'
2022-06-28T16:05:59,922   adding 'metawibele/common/extract_abundance_feature_subset.py'
2022-06-28T16:05:59,924   adding 'metawibele/common/extract_abundance_sample_subset.py'
2022-06-28T16:05:59,927   adding 'metawibele/common/extract_uniprot_pfam.py'
2022-06-28T16:05:59,930   adding 'metawibele/common/filter_clusters.py'
2022-06-28T16:05:59,933   adding 'metawibele/common/filter_prevalence.py'
2022-06-28T16:05:59,936   adding 'metawibele/common/join_family_abundance.py'
2022-06-28T16:05:59,939   adding 'metawibele/common/prepare_domain_databases.py'
2022-06-28T16:05:59,943   adding 'metawibele/common/prepare_uniprot_annotation.py'
2022-06-28T16:05:59,946   adding 'metawibele/common/prepare_uniprot_taxonomy.py'
2022-06-28T16:05:59,951   adding 'metawibele/common/prepare_uniref_annotation.py'
2022-06-28T16:05:59,954   adding 'metawibele/common/split_family_abundance.py'
2022-06-28T16:05:59,957   adding 'metawibele/common/split_fasta_file.py'
2022-06-28T16:05:59,960   adding 'metawibele/common/transpose.py'
2022-06-28T16:05:59,964   adding 'metawibele/common/utils.py'
2022-06-28T16:05:59,967   adding 'metawibele/configs/MSPminer_setting.cfg'
2022-06-28T16:05:59,970   adding 'metawibele/configs/characterization.cfg'
2022-06-28T16:05:59,973   adding 'metawibele/configs/metawibele.cfg'
2022-06-28T16:05:59,975   adding 'metawibele/configs/prioritization.cfg'
2022-06-28T16:06:00,029   adding 'metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz'
2022-06-28T16:06:00,066   adding 'metawibele/data/domain/Encode_sigmoid_colon.txt.gz'
2022-06-28T16:06:00,107   adding 'metawibele/data/domain/FANTOM5_colon_rectum.txt.gz'
2022-06-28T16:06:00,159   adding 'metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz'
2022-06-28T16:06:00,171   adding 'metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz'
2022-06-28T16:06:00,195   adding 'metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz'
2022-06-28T16:06:00,238   adding 'metawibele/data/domain/INTERACTION.txt.gz'
2022-06-28T16:06:00,277   adding 'metawibele/data/domain/Illumina_Body_Map_colon.txt.gz'
2022-06-28T16:06:00,282   adding 'metawibele/data/domain/README.txt'
2022-06-28T16:06:00,308   adding 'metawibele/data/domain/gene_ontology.txt.gz'
2022-06-28T16:06:00,982   adding 'metawibele/data/domain/pdb_chain_pfam.tsv.gz'
2022-06-28T16:06:08,487   adding 'metawibele/data/domain/pdb_chain_taxonomy.tsv.gz'
2022-06-28T16:06:09,103   adding 'metawibele/data/domain/pfam_descriptions.txt.gz'
2022-06-28T16:06:09,111   adding 'metawibele/data/misc/vignette_function.tsv'
2022-06-28T16:06:09,115   adding 'metawibele/data/uniref/README.txt'
2022-06-28T16:06:09,629   adding 'metawibele/data/uniref/map_Rep_TaxID_uniref90.demo.txt.gz'
2022-06-28T16:06:10,178   adding 'metawibele/data/uniref/map_Rep_Tax_uniref90.demo.txt.gz'
2022-06-28T16:06:11,653   adding 'metawibele/data/uniref/map_TaxID_uniref90.demo.txt.gz'
2022-06-28T16:06:13,183   adding 'metawibele/data/uniref/map_Tax_uniref90.demo.txt.gz'
2022-06-28T16:06:13,887   adding 'metawibele/data/uniref/uniprot_human_pfam.tsv.gz'
2022-06-28T16:06:13,939   adding 'metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz'
2022-06-28T16:06:14,428   adding 'metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz'
2022-06-28T16:06:28,097   adding 'metawibele/data/uniref/uniprot_taxonomy.tsv.gz'
2022-06-28T16:06:29,349   adding 'metawibele/data/uniref/uniref90.demo.fasta.dmnd'
2022-06-28T16:06:29,365   adding 'metawibele/prioritize/__init__.py'
2022-06-28T16:06:29,369   adding 'metawibele/prioritize/filter_prioritization.py'
2022-06-28T16:06:29,372   adding 'metawibele/prioritize/finalize_prioritization.py'
2022-06-28T16:06:29,379   adding 'metawibele/prioritize/quantify_prioritization.py'
2022-06-28T16:06:29,382   adding 'metawibele/tasks/__init__.py'
2022-06-28T16:06:29,396   adding 'metawibele/tasks/characterization.py'
2022-06-28T16:06:29,401   adding 'metawibele/tasks/prioritization.py'
2022-06-28T16:06:29,405   adding 'metawibele/tools/__init__.py'
2022-06-28T16:06:29,408   adding 'metawibele/tools/combine_gene_sequences.py'
2022-06-28T16:06:29,411   adding 'metawibele/tools/extract_cluster_CD_hit.py'
2022-06-28T16:06:29,414   adding 'metawibele/tools/extract_complete_ORF_seq.py'
2022-06-28T16:06:29,416   adding 'metawibele/tools/extract_non_redundance_seq.py'
2022-06-28T16:06:29,419   adding 'metawibele/tools/extract_protein_coding_genes.py'
2022-06-28T16:06:29,422   adding 'metawibele/tools/format_contig_sequences.py'
2022-06-28T16:06:29,426   adding 'metawibele/tools/format_protein_sequences.py'
2022-06-28T16:06:29,429   adding 'metawibele/tools/gene_abundance.py'
2022-06-28T16:06:29,432   adding 'metawibele/tools/gene_abundance_indexRef.py'
2022-06-28T16:06:29,435   adding 'metawibele/tools/gene_catalog_abundance.py'
2022-06-28T16:06:29,441   adding 'metawibele/tools/preprocessing_tasks.py'
2022-06-28T16:06:29,447   adding 'metawibele/workflows/characterize.py'
2022-06-28T16:06:29,451   adding 'metawibele/workflows/preprocess.py'
2022-06-28T16:06:29,455   adding 'metawibele/workflows/prioritize.py'
2022-06-28T16:06:29,461   adding 'metawibele-0.4.5.data/scripts/characterize.py'
2022-06-28T16:06:29,465   adding 'metawibele-0.4.5.data/scripts/preprocess.py'
2022-06-28T16:06:29,468   adding 'metawibele-0.4.5.data/scripts/prioritize.py'
2022-06-28T16:06:29,474   adding 'metawibele-0.4.5.dist-info/LICENSE'
2022-06-28T16:06:29,476   adding 'metawibele-0.4.5.dist-info/METADATA'
2022-06-28T16:06:29,477   adding 'metawibele-0.4.5.dist-info/WHEEL'
2022-06-28T16:06:29,480   adding 'metawibele-0.4.5.dist-info/entry_points.txt'
2022-06-28T16:06:29,481   adding 'metawibele-0.4.5.dist-info/top_level.txt'
2022-06-28T16:06:29,485   adding 'metawibele-0.4.5.dist-info/RECORD'
2022-06-28T16:06:30,626   removing build/bdist.linux-armv7l/wheel
2022-06-28T16:06:31,011   Building wheel for metawibele (setup.py): finished with status 'done'
2022-06-28T16:06:33,484   Created wheel for metawibele: filename=metawibele-0.4.5-py3-none-any.whl size=84126782 sha256=10f643bf273369d90945c26493c25e40502703122fa41c0085b8b1e465918e03
2022-06-28T16:06:33,486   Stored in directory: /tmp/pip-ephem-wheel-cache-oyoiry01/wheels/12/60/60/e477576570a41635e0f9fc7598aa516c08c62db82ba696f0f5
2022-06-28T16:06:33,614 Successfully built metawibele
2022-06-28T16:06:39,192 Removed build tracker: '/tmp/pip-build-tracker-o6f5092u'