2022-06-28T20:58:41,138 Created temporary directory: /tmp/pip-ephem-wheel-cache-vhal6lod 2022-06-28T20:58:41,144 Created temporary directory: /tmp/pip-build-tracker-ugft54_p 2022-06-28T20:58:41,145 Initialized build tracking at /tmp/pip-build-tracker-ugft54_p 2022-06-28T20:58:41,145 Created build tracker: /tmp/pip-build-tracker-ugft54_p 2022-06-28T20:58:41,146 Entered build tracker: /tmp/pip-build-tracker-ugft54_p 2022-06-28T20:58:41,147 Created temporary directory: /tmp/pip-wheel-1hv89nd8 2022-06-28T20:58:41,211 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-28T20:58:41,219 2 location(s) to search for versions of pyhmmer: 2022-06-28T20:58:41,219 * https://pypi.org/simple/pyhmmer/ 2022-06-28T20:58:41,219 * https://www.piwheels.org/simple/pyhmmer/ 2022-06-28T20:58:41,220 Fetching project page and analyzing links: https://pypi.org/simple/pyhmmer/ 2022-06-28T20:58:41,221 Getting page https://pypi.org/simple/pyhmmer/ 2022-06-28T20:58:41,225 Found index url https://pypi.org/simple 2022-06-28T20:58:41,634 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/24/b9adc93653b83e3aa333588f8fe80cf6a058b97497a1a722e7a2cf5bc5b3/pyhmmer-0.1.0a1-cp35-cp35m-manylinux1_x86_64.whl#sha256=806fa21ffa00ebdc672bd11abb2bc4bbc04b7bc26bbd3fb93311da7cf7eddef5 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,635 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/5a/594c4415860394f14b94137e10f3b6264fbd452a9ed00371fef870bdd68e/pyhmmer-0.1.0a1-cp35-cp35m-manylinux2010_x86_64.whl#sha256=d9acf39c95d9f8d314dd53ebbc30dfc0e8150bf8ada31fd38b4f820767b40484 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,635 Skipping link: No binaries permitted for pyhmmer: 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binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/b6/b92f44fcc712bc3dd621eccefe34d569a17f0ae73133f352a47fb2029c44/pyhmmer-0.1.0a1-cp37-cp37m-manylinux1_x86_64.whl#sha256=a85404b1e4ab5dc111949aca2e3ae5733c361456ac7b9be9449269becc57de70 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,638 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/b6/0ca49ee6803d761eefc93528e9e8106151e06acf77ba9f669275c01863ac/pyhmmer-0.1.0a1-cp37-cp37m-manylinux2010_x86_64.whl#sha256=8b7af66bdcc379cfb16a580b640deb66b59a7c3a9fb052ffda8db0a710fea59d (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,638 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/0d/e2e21b3925af6887baf35a3e8993b5fe4863d93638138e7d5f236bcf2197/pyhmmer-0.1.0a1-cp38-cp38-macosx_10_13_x86_64.whl#sha256=e32db22ee7f6879674f6981e661a1a65e230e6ebd9ac2a2b868d6d3a538bbf26 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,639 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/3d/aac55b3f74ecd81ff3f619083c277ba40df45d8e6b8fc19d58eb74fab09b/pyhmmer-0.1.0a1-cp38-cp38-manylinux1_x86_64.whl#sha256=b16a8e7884646440a95a61b9f32a50d527adc4e7a6a8231d4275b1aae6c793a3 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,639 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/cc/11cb714fad98ed3c1689ce83a31a29d744ed34c822af3ae63b2450e6b159/pyhmmer-0.1.0a1-cp38-cp38-manylinux2010_x86_64.whl#sha256=8ef8b77a15b9fcd507987f5b6df4bdeca87f96110ed487392bba6f57f8d8f4cf (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,640 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/39/ca6e515c639a28632e52579a75aabe22d6bf2fe2a66cb2bd407fea81a1fe/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux1_x86_64.whl#sha256=b99bd73fe24337f1de4809aa65c954a8f2f58028295966ce1ea0dbfd40d00177 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,641 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/21/bb677b42abb107adf96a8e305659779332f1faece8c3c8b8227d6c447714/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux2010_x86_64.whl#sha256=5ec7ec4e10ea0a40cd8bfc7517e14581c4a0794ff3fe2ee792bd354977b1c735 (from https://pypi.org/simple/pyhmmer/) 2022-06-28T20:58:41,641 Found link https://files.pythonhosted.org/packages/9d/52/5dfdc7b0b49d72f6975c789255f785fb5adaed4d316dea2c1fd5752e3671/pyhmmer-0.1.0a1.tar.gz#sha256=d6df470a930be9207468581ae08b6424fb8249c8fe1fb07f132c8dc640aa728d (from https://pypi.org/simple/pyhmmer/), version: 0.1.0a1 2022-06-28T20:58:41,642 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/5a/94c8ad40e16bd1b238703a8815bd68d90b0559ac8cbaa7a027d2a886978b/pyhmmer-0.1.0a2-cp35-cp35m-manylinux1_x86_64.whl#sha256=fd8c6a990118ba73675b7017d61d788faf1d423e0076ea35fe12788ccff08f15 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,643 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/a8/b31471655d0f09813748c9d8888587e3a1e1573f0c01c748676d03cc3c51/pyhmmer-0.1.0a2-cp35-cp35m-manylinux2010_x86_64.whl#sha256=a559f03cc14b5d0ba2bac047f8779663ae42711173112fe09d142838d5652002 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,643 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/1f/4b3aef73b2a9d4e07d56700a1a11794e6c92dd9018c1008b53e6c0e903ca/pyhmmer-0.1.0a2-cp36-cp36m-macosx_10_11_x86_64.whl#sha256=bcdb5de189743c8f47ec298be0a1744e07540c4506b4dda9afc5910cd369a5b8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,644 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/83/a386d9e2350ec96fe9d0c6d8c274c72afda82745e5586926966b0c8e678f/pyhmmer-0.1.0a2-cp36-cp36m-manylinux1_x86_64.whl#sha256=c84c9db650b91567a19a964d303d696cddb9bc370f45a7759b67e7a10db88587 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,644 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/24/aaa2a74692ac30b32f7da206479021eb206ea6e7dbb7023ad8bae97db1a4/pyhmmer-0.1.0a2-cp36-cp36m-manylinux2010_x86_64.whl#sha256=81506a37f28294718b4a2815fc43bd3c5f0c4e952a6e719b9132015841249add (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,645 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/4a/d1cba5443443544a77b200f47f2ba3ab679ef974bbf51dbfefde401902f0/pyhmmer-0.1.0a2-cp37-cp37m-macosx_10_11_x86_64.whl#sha256=039d472e8a29360d9a5f2956b5e6852ea24714b500f156104ad3de563371fad4 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,645 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/bf/a7d9c65a9c2660474ad72338ca47427f6f78e6ad378026edf2fdce3019f2/pyhmmer-0.1.0a2-cp37-cp37m-manylinux1_x86_64.whl#sha256=0d41844af1e2d3b853bf009f2e8a3fe715fc192937f9f75ff65253ed589752af (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,646 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f7/10d886b6e03cdf16a6123dc48687cf1aaa025ac2b17d902bce75d4785ea4/pyhmmer-0.1.0a2-cp37-cp37m-manylinux2010_x86_64.whl#sha256=3b7596a5da7c990714d8c413b8fa379c5c6154b05a2ab7129c8377a43633097f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,646 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/54/8b3c37d0732fedc623776c24f703a10b069436039abc2cbbed14eff2d665/pyhmmer-0.1.0a2-cp38-cp38-macosx_10_11_x86_64.whl#sha256=ac824b5884fe001f171f25b463f5c92a8f031deae39f1cbd5c3b5982184ffdb3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,647 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/4d/86ff1e09e523b7d38d5d88d507f4131d4e20348855bb73603693355baf99/pyhmmer-0.1.0a2-cp38-cp38-manylinux1_x86_64.whl#sha256=23d96d7c1748dffcb82c25362707c4bf3e7d7aa28c9db58ae7565907692801d6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,648 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/d7/a10594b0c3bac79e2526c5659789b38cd98675cf8bc600c7c386482f40ad/pyhmmer-0.1.0a2-cp38-cp38-manylinux2010_x86_64.whl#sha256=9d49c89b5af661da9c4b02d8720f1a56870960cd4130edc9570cb227eb4c50be (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,648 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/f8/e76e388294f53736440bf078f3e6d407625ab53077c8da0a80c776aaf5de/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux1_x86_64.whl#sha256=cbd6e9b5f33624e5ae93d31df8e27d09ef38281707ab1f3c69b62827b7abc643 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,649 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/94/945c8e50db0e658ccbda8abb26a0becd29e414bbfc9a2aa0a07329ac86b4/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux2010_x86_64.whl#sha256=acbce675dc2acbd26b42406ce3d17fccbdcea4871d28daf6178dc83da870ee08 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,650 Found link https://files.pythonhosted.org/packages/a9/d8/7d1a3e189d29f5f57cfc2b5706e46d9c593228316d88d9791e4b6deaf818/pyhmmer-0.1.0a2.tar.gz#sha256=92f3cc34840e88b0fc601ee9bc4733b01d3132c954ed2b3d26b41753b7da4c76 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a2 2022-06-28T20:58:41,651 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/dd/ffe938b4db1f8230060a11a725500da00678d2431552685541e49f56a1cd/pyhmmer-0.1.0a3-cp35-cp35m-manylinux1_x86_64.whl#sha256=8840f3606e1efbcbcd316e5d1d9f1d1e7424c6773ce0ecf0b49b31819033b289 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,652 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0e/8634c98e9bb007edb4d9b0504cd2325f0db0303124c2285405f422d48d60/pyhmmer-0.1.0a3-cp35-cp35m-manylinux2010_x86_64.whl#sha256=39aed8d36433dd3ddb5f5a89f8758b619234981cc5bcbb2000408a5eea067a3c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,652 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/a6/5d0240be2817e6b3c876493903fdf300a05a4d27ab4ce3e71a86bb4e6e47/pyhmmer-0.1.0a3-cp36-cp36m-macosx_10_11_x86_64.whl#sha256=97c1e438ec6bc8b8300a263e4e8374a433423255c03914e6c1bed169e6aa3624 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,653 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/05/76e3a2a9e1a8d8f2cc41a56712b6f44d518d44e697d8cf4dd501540233bb/pyhmmer-0.1.0a3-cp36-cp36m-manylinux1_x86_64.whl#sha256=4ae610f9cf93c8339d38b53b6256f7791110a14b541f30473e475b7fd35fa637 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,653 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/0a/6f7079e3579f2729c0bd8d504f321336e981bb7e6d39cd17ec3077a5fff4/pyhmmer-0.1.0a3-cp36-cp36m-manylinux2010_x86_64.whl#sha256=f8f41fb14094e3b4326f63ec2b2746765662e33770cdaba4149a0de174c70502 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,654 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/43/7dd16f4ba5889baf5948f420bfb0333b10f00b247b7dc346eb1f564951e9/pyhmmer-0.1.0a3-cp37-cp37m-macosx_10_11_x86_64.whl#sha256=0b9696cc7d55db6e5ccc9265bea0fac93c21c8feb794df16217b6dbc400938e6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,654 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/e3/1ae53fd316b2f4d952c9cc566068781a0e0bd676e741f328ae2c902d1490/pyhmmer-0.1.0a3-cp37-cp37m-manylinux1_x86_64.whl#sha256=2a4a7761f7ac204472d6cd4eeac9b3e4fdda777a39923e64937ce16e883a4b3f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,655 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/ee/8fa3f99cb062863c91e73654f21024373cae0187e5e3476275c1cf9d06f5/pyhmmer-0.1.0a3-cp37-cp37m-manylinux2010_x86_64.whl#sha256=b9d93baefe6b2cf71299bd46419315914d81d1dcb9df7581c40daf611b2d16bf (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,655 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/67/4cb6f3ff89e47e060598f940d771799fdd7b1427544cd8da94ce895e9e4f/pyhmmer-0.1.0a3-cp38-cp38-macosx_10_11_x86_64.whl#sha256=6b17c640a3892b96352437cb05a9568697d5a8e583959b1588bd2fdb632761e1 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,656 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/61/e5f4b60a3ea29110b78672a95dac9bc165727c96732e34868f249e3422e1/pyhmmer-0.1.0a3-cp38-cp38-manylinux1_x86_64.whl#sha256=0dcac67c8e1509c86ce600844b04e4bc7facc6087b4ee16803489d1013efd293 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,656 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/37/df/8c9ccb8baeec522b05e956beaf899596ada02a3b383dc7a8d259b69e825b/pyhmmer-0.1.0a3-cp38-cp38-manylinux2010_x86_64.whl#sha256=b33547075e3af4c760f9ff68cb362dcad201fcf1601b1d81e6e243f4fe0618a1 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,657 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/78/7cd9016de0f1aa1ee2da0200224cb886959e62cb97c933553cdc7fd2560f/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux1_x86_64.whl#sha256=d5b7af5e0b28d5d234030a908fd5f5a6a79b23114b6707328cce760318a1f2c5 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,658 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/2a/abf43d38a2414b719e57bf5c5edb0803179f6d0e6a16fc2eed28cc77b6f5/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux2010_x86_64.whl#sha256=c082cc20848e1125e5033ed78b2f6d5a6078c8006231a01f4446c1486bcf5540 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,659 Found link https://files.pythonhosted.org/packages/54/29/75df6ece9030041c44fff57220bf48950d4c653ddca7e02a54d4d5fc21cc/pyhmmer-0.1.0a3.tar.gz#sha256=3a7da3a9637fcab449dc696312bae5c3deb08118aa45d6d4d015f86dfb1f115b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a3 2022-06-28T20:58:41,660 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/0b/15f39d875ef0cbadfd3b069916f632409989918429ec2604eec53cd7e448/pyhmmer-0.1.0a4-cp35-cp35m-manylinux1_x86_64.whl#sha256=694f514d72136a5eb4ed433e0c6dda488e0b075643f1fd106fe99858350402ba (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,660 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/3c/336700ba033d737f5e839fd63e3f0aa4946a66870f7d54f3825ac34c1a95/pyhmmer-0.1.0a4-cp35-cp35m-manylinux2010_x86_64.whl#sha256=cefcf4cccffabf5587ca5fee60970528936aac1be0378130fb1f510b6dfd97d8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,661 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/af/ed96bc98aa7c04aa0c1ecdc7bc2ff90a6fde3d4f323c23509e56a205d93d/pyhmmer-0.1.0a4-cp36-cp36m-manylinux1_x86_64.whl#sha256=bfc63059c759a4ccbef969a9489f43ef98ce89e06080399c41627a03c1896f02 (from 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https://files.pythonhosted.org/packages/8f/64/14e6ba3b80de2a4bcbfff2f876cc9b04151570d88e91d5a6496052e33072/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux1_x86_64.whl#sha256=1a6ef09eb936adea88e6a7938166cdd97529f3ae390a0fbf86b88bfb468229f6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,666 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1b/9a/288358a8964913e26cc5d10e5e5a4ec01b72a33d1072d8f4c1423d24e643/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux2010_x86_64.whl#sha256=0009f241eeaf425c9b7fd541ef7872991262c22dec63b1c5c655d2b2ce5f4451 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,667 Found link https://files.pythonhosted.org/packages/b6/28/6bbe80cb3e3fcf41e368bd852dcbd88914534b2bae2722a958b8bd4accfb/pyhmmer-0.1.0a4.tar.gz#sha256=e20af468ea1d78d0fc91746e011ef0790ca475303af752f53ba21e9518e04077 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a4 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https://files.pythonhosted.org/packages/52/f5/68b11fb13bc986885528686ac0a97bd56b719130748cdc663e96c67c8c13/pyhmmer-0.1.0a5-cp39-cp39-manylinux2010_x86_64.whl#sha256=6260ee8202e2f2827a9ebcd4659e011c11313accc318215c5792bea045e08691 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,673 Found link https://files.pythonhosted.org/packages/83/0c/dd675ccfc4ac94e305f224e20a62f85f2d69eb28a2fe182e3a8791bc10e5/pyhmmer-0.1.0a5.tar.gz#sha256=b936f72f686b246c5618f77814119886f1fb351db3ec9156e78175261da8d2f0 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a5 2022-06-28T20:58:41,674 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f8/d9/e06925b2143d7882602b3b2b18b1e39247aa395022acf660f2362e016d75/pyhmmer-0.1.0-cp36-cp36m-manylinux1_x86_64.whl#sha256=d40e27017ebf4f29a0c31f586256574884fee559f095c08cb1c39ee1dc443e0b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,674 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/bb/38717304f0071241dae861805cd3965a635716cd8e209f7a57846beb6bcb/pyhmmer-0.1.0-cp36-cp36m-manylinux2010_x86_64.whl#sha256=49089c4c1d137e609e02928a257345ee9a29ed0bed3eaf97d41d7c09a7ac7a4b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,675 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/6f/c31e9586a2f3979939d86281bf3afd2169ebc1d0ae3bd8358a155e4daa3b/pyhmmer-0.1.0-cp37-cp37m-manylinux1_x86_64.whl#sha256=0b9df445238b331a98879d463f8afa1996db6dd9ef831be293d80bbce9232ba3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2022-06-28T20:58:41,676 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/0f/8a/0031d0591da9f548894a9c642eea2093a5126607c172653f95b1a9f4e87f/pyhmmer-0.1.2-cp39-cp39-manylinux1_x86_64.whl#sha256=16e8d69d779d222371bfc71142cdf28a0cebca1e1d04842a9e0577f7dbfc9222 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,691 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/a4/6993b2c3f5fbeca7eae8db5be6d295cbda155f167446b39124e6b86d8188/pyhmmer-0.1.2-cp39-cp39-manylinux2010_x86_64.whl#sha256=57adfc1940942017ba84dc46ef9d79d940f223632ba4b8757b4fcc876b49fe4e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,692 Found link https://files.pythonhosted.org/packages/cf/c7/e12e012065479815a016011013d76b3b96f4f7f9af43796343615a3931a6/pyhmmer-0.1.2.tar.gz#sha256=c96ca0a58ef3192e142bece26feb484f5d7e82c16a519158cbaf7852fa2b6585 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.1.2 2022-06-28T20:58:41,693 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https://files.pythonhosted.org/packages/d0/a6/a707ffe2588d16487a86e29e02aebfbabca7ab7f6d634026df955ef5259f/pyhmmer-0.2.0-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=2abf19ebdc2c72d62d89999da60504e77f3a9d585856440400d0c8afb8c87477 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,713 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/33/24/f686d614d78a75a84237b6bed3dfccd2fdb7777a68ab20bd439e6006e74f/pyhmmer-0.2.0-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=b0079fa847f694ae87c59560c4497b762f9d982274e60926a44fb3f1090b32ff (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,715 Found link https://files.pythonhosted.org/packages/63/1a/fd0ed657605ef315486b0769acc1a43d3f6a37b13ea9b606a46e300617d8/pyhmmer-0.2.0.tar.gz#sha256=e532f64418d1cd43340d0615dc133c21e3d8128f43723c6502a92e1986c6ebd8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.2.0 2022-06-28T20:58:41,715 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/ed/b6538d599c328f880b949b57c432be2701ba5a6f1c032eb055d3acafd32b/pyhmmer-0.2.1-cp36-cp36m-manylinux1_x86_64.whl#sha256=f5d27aa2adc0c632bfc06af97d8ba2934c7fdff3cf224e12f2f29d56b18ea872 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,716 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/43/c2a90dd0e06d7dc09d952d80410751b02282b4ca4280fde3bde442795ce0/pyhmmer-0.2.1-cp36-cp36m-manylinux2010_x86_64.whl#sha256=aa4e462b35bebd4d4139ec3ff2f4861b2fc9212ddbdd5f292924a9179c705cca (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,716 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/7c/d3f741a6021ad34a0330c4b025dcc5b6a149e453d19b1a6955e1a6840e69/pyhmmer-0.2.1-cp37-cp37m-manylinux1_x86_64.whl#sha256=cc1eea8ab080f06f9599d00ebf7bdbd256232211841983dd151e106aa504c249 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,717 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/08/6e9cd70c963df09e626a0aa4ca3e0db88cf06aac837521fdaf4105f2a4cc/pyhmmer-0.2.1-cp37-cp37m-manylinux2010_x86_64.whl#sha256=b42d8883707dc9deb40192b9e8f7faa8d14fdf678190d878e2bc862723c273a8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,717 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/90/3d/7ea26b8136b23b600c9269c60cffc119889cbdc5bed174485cf864517875/pyhmmer-0.2.1-cp38-cp38-manylinux1_x86_64.whl#sha256=59a12e8631fac56ff7da3bcc24583a6961f32d42b2d72644d27561b7175f7615 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/86/4e/019bdee89691d26bb66acba19b354cf88270396db6000362069b0d2f86b8/pyhmmer-0.2.1-cp39-cp39-manylinux2010_x86_64.whl#sha256=22f18450a837e206b8346b206a86337dbe13d11de906a659b146ff6e22630c93 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,720 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/dc/45bc67bc9ceb8280a62259d1c018e64bc188d006b61d0ec44ae61cb7e704/pyhmmer-0.2.1-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=23e9b319804a8415bd7801f1e877f5e2048564562aab0cf97d7524f8dbec96cb (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,720 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/77/b6513032ae50e0d846b77e459e093cd829ffa46d61e6e9f8e0c93fd53f61/pyhmmer-0.2.1-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=c874d2e3b05b7af8964f4d6fb3961b54077de37acf236d4e5c421e10749e42f9 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,721 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bc/60/ff3221b612563f41a1ed356c5de3769ea1e3085bd121c685c945fcc0a7aa/pyhmmer-0.2.1-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=6b822faafb5b07300ad70c5db4e499d56c8d11d389d536a1202a7b8bef2d5e1d (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,721 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/62/b11a93e7c6caf67167ae17994708f78fccd1d09595b6091f4bf7d1ab757f/pyhmmer-0.2.1-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=0ae0cbb1ecf15795947cda7e0a08043cc61f904b92f61032d1da6a3a7324e7bd (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,723 Found link https://files.pythonhosted.org/packages/c8/46/fffe6de4f62fff6e0f9a75f7b9bd0b2ce227acceb74e5410953b40f56663/pyhmmer-0.2.1.tar.gz#sha256=676e79bdd525a25046d3bee12affbbd379a81b89193657cac1f6449cbc064d2d (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.2.1 2022-06-28T20:58:41,723 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/05/3c7ecb295bce4da5013178f0111250fd760d4cbb55c30c55b555b8b1ff69/pyhmmer-0.2.2-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=4e06605fa8de43741711c824ee06fdcaf85b15d376bd3598370e214abe2817c8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,724 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/4d/78e075fe013811b9ed0844c897829de3794379b81fea4c3c325e044d0b20/pyhmmer-0.2.2-cp36-cp36m-manylinux1_x86_64.whl#sha256=d70b436ef57d946ddc263dc958d2c78cf41e7fa6a5d6ead51273eebeeda17c81 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,724 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4d/88/9e436fe20ef2f5fd96885fbd7938606634cb979f06ce61a3b3be25cc4788/pyhmmer-0.2.2-cp36-cp36m-manylinux2010_x86_64.whl#sha256=2d07f566870662578ecebcf5f97c6e46b0315295bf0f81f03da53db69c22fb2b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,725 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ae/8f/48777edd874b877029473704164357d80de168ba7948f0d152976dbadd52/pyhmmer-0.2.2-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=f2ce945995f9fe1cdf84f1acf18585ce70e8ae61ddc2e9e9847a027897532ccf (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,726 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dc/1b/0c27f056247981a4108906e94ec44c0ded24e82c823e947549506c756f61/pyhmmer-0.2.2-cp37-cp37m-manylinux1_x86_64.whl#sha256=201c21dacf5672948c2dd9af2790e92ff1d4d26a3a09dd7b91264d89ca2a8e01 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,726 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/e1/c396899f21647a4f48b076cb71e4fd6bcdc411452f04262228b62b751b63/pyhmmer-0.2.2-cp37-cp37m-manylinux2010_x86_64.whl#sha256=9e860196252d23512be727d10ae77e6548a3656d779fb5a2a536b5d2c79f8cf8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,727 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8b/fb/c7ee650bdb19d3985f6e099595e2a2daac910e9d4df7bfdca9236545bb4f/pyhmmer-0.2.2-cp38-cp38-macosx_10_14_x86_64.whl#sha256=1af3c7d7a5c279f9874e03696102982ed9c467e3013c7731b1eeed83b9dad6e3 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/51/b3/9f25dc33a7d4f6b12fe81b298ff59d5039ea77b43e5fe841ac292071ca9c/pyhmmer-0.2.2-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=001922e7bf986b17e9d94f5c0d143f58aa55ad5dd4340aee494fa2f3ff09a987 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,731 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/b6/a3cc8673c5a8f69a3bfbcbcb27a3b01de924ebefba801930bc10c508eb60/pyhmmer-0.2.2-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=4926c0e52fe83dbc278b26c535d4994cbf56f8a96c400b41c8337e848140dc4f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,732 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/9a/9f22affc49092b582a7bca5fa683daa5c388f5e28360cccc1edd705acd40/pyhmmer-0.2.2-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=11317eeaae87ff57c529d9860c25f0e4d0f3f81b5f1e4aab46838067abb4fcce (from 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https://files.pythonhosted.org/packages/4e/f1/10ed69614333626985a2661bd5f72bb0746775e95f579cbee706f7cc2d14/pyhmmer-0.3.0-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=54359cde39ac18c2f30b48ea0392f7f5994a7baa07c0396603030039d10099fc (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,735 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/ab/166744efb3ce835c17ec8e92af58b87082ee02e1d3a5c9cb81c91762ecc8/pyhmmer-0.3.0-cp36-cp36m-manylinux1_x86_64.whl#sha256=a606054648292aa8dbc153410423e3667aaddb47ff2327fb5b66ac3bba3c3aeb (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,736 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b8/5f/42c4add1bb8a847d3a42d28b92063871f8484d2caeda8a863b5ec9cf8b4c/pyhmmer-0.3.0-cp36-cp36m-manylinux2010_x86_64.whl#sha256=af12513e437a5855960940ce371a7d498a6b214ec0aaffd00d409dcf4739174e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,736 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/12/fa/403b9d98f8042eeb9d1583bcfee400d0c355831c4bb745a5382dc3bd54b4/pyhmmer-0.3.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=cd0e7bdac41fcfece6f583722cd099427d3a3846d04d1c0cfd375454c70fbd7e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,737 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/f4/322f71a65af2f5e988dd35d06f14fe2cec32428b43ed51f464023af03c10/pyhmmer-0.3.0-cp37-cp37m-manylinux1_x86_64.whl#sha256=d6990a538d26ebdd361e6e9c3bdfd9012aedafc0ca50508d05c1fe56f62b3fd7 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,737 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e7/3f/aac20ccc3694dd3f07a2d137d8b2d34436e6f21b4f8d45e44d83ba0990c3/pyhmmer-0.3.0-cp37-cp37m-manylinux2010_x86_64.whl#sha256=83e93bc5e36083384e8afb122d74edbb6fdce0a1d73e75fbaece9d0ef6977548 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,738 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/24/f49df93d5fc0f419fd6858e2d432453c27607eca2612ccc557287375c3d3/pyhmmer-0.3.0-cp38-cp38-macosx_10_14_x86_64.whl#sha256=454ca0082747cb0da4fe143874241463e2ba8641561c0acdb0be900c509039d3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,738 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/a4/32e3f03ab68a92a564bbe27f4384d99acfdaf8b5cbddd48f91926659aaa6/pyhmmer-0.3.0-cp38-cp38-manylinux1_x86_64.whl#sha256=0233bd53e1546d6d1b73645073c189ebebcb92999ccb257d517d668c952f0c9c (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/7f/65/3dfc2ab2a1c9ad08048e043be080d6d77c1139bb6d79b787e83217a804e9/pyhmmer-0.3.0-cp39-cp39-manylinux1_x86_64.whl#sha256=c1be43c476426c12e656e4a6bd21eacd909de5c81b080f7108efb068cdae8e00 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,741 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/72/56/bd664da15d6eff0e57163598b18bcb66db853fbb80da61d41a74ddba33fb/pyhmmer-0.3.0-cp39-cp39-manylinux2010_x86_64.whl#sha256=3fcf01af6ac71e53277a2d3e687a447f841b2fc8db41b7471d1dd477bfdf6d98 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,741 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/ab/0d6313332333d9104d39748c1fbdbb312fd3a3cc9f871b4f7bbea4dc5eb8/pyhmmer-0.3.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=78d7f5270717f65f6deed5855b614cbe38ced711c8ded92fe532008786ff8881 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,742 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/6f/1bb9034ca6c811c37dcf4eb0f9304e4d575cd4855be7da0c51cad30c117d/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=b5c493cbd8792bb70f47b5366e5165f16d5ceba50c560b3e3475b9c04ef07879 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,742 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/84/801ca5f828500d3825b066c8006d6b501d67d57d43f1c8d95c62fb72ed21/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=54fb993afb156f0513019d5ea6388209d24589bc710c03242cb3c1ed31ca71fc (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,743 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/bd/c936e6aaa290135fadb7a240036567ea730c38646692ed5a161094168db7/pyhmmer-0.3.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=6bd7e465ca248d4761f608d85efe84c51c17114b1ce6971f27f039f9789d1160 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,743 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/23/486eb994a82339f2dd5e15f734dfe622c7767d41b77b48dc638cc06192be/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=9583b056b7ab4e9ee39056a92697a2dfa809d0f4cee289f256f99ec9b9dd1091 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,744 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/e9/35bc8f987689ae229a69375d849818e3e444970e5c0a506c2ae4a9b67b37/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=abe601c1bc58568e46df694aac79061186c5ba37faba9304559de5663acace9a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,745 Found link https://files.pythonhosted.org/packages/30/13/7489e047ac14f57c8b24a4ae33feebb37a07b8c419bbd4fba9f6d4e701a6/pyhmmer-0.3.0.tar.gz#sha256=fc163a0bca0dd50e9f240ece56ed8cd71cda824774b1e47e2332792f9df86fcf (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.3.0 2022-06-28T20:58:41,746 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1b/fc/a6dcd6a8fd03829823c055a2ac2ee97c7d295f755d7ffcb5a1a9f8590396/pyhmmer-0.3.1-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=5d140deddb81fef08dd3e11a8798b58bb60ce77be20501b0350e08ca8c81179f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,747 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/ba/3bcc8eddba05cf995bb5a718f904e08875159d430687c8a65f3cdcf1ea24/pyhmmer-0.3.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=e6c3df0c004bb7229b1dc62b4989762f2637a9b4ba30e0cd1887536e15b62def (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,747 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/5b/b92aa85314f24f4a19f66f18cfa3c6f3807594d7c3a23a8bfb5cfd92c282/pyhmmer-0.3.1-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=33e17ef890b430ffdd5d90ce893b60a94587cb7dc9bbc015beed56f5dc260830 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,748 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/ec/8fc61155ad090117ec91574677ffe7be2540b8ac1eda05aac39b04b2baf7/pyhmmer-0.3.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=536bdf5dd31cfbd8eea0e77d383dfb643b20fe1fcdfbfabd650d6d3ad17e2ae0 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,748 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/af/d847ec7dced017b36394aa1f1b1322f561b68831d0c82c5ed4198c10b4c6/pyhmmer-0.3.1-cp38-cp38-macosx_10_14_x86_64.whl#sha256=802c2a163bab4f9af60f72bf32f9feef9c2a48f5fa00bd38c28db8247329a72a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,749 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b6/2f/ed4c88a0ff74bce8781ecc75dd6d34d6d6c4f7dbb6f8fc7538812fb1bcb8/pyhmmer-0.3.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=6d9b494eab6e45101bdb63e13bc980ab5e5cb94dd828c388eca39aac5d215af3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,749 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/ba/2071d1002491f10b45fe057f8707b7f879546443a18ed0acb9a9486d3033/pyhmmer-0.3.1-cp39-cp39-macosx_10_14_x86_64.whl#sha256=1427f26db4b9d5d277340b30e7b7b34922c90a079f0dbe42d1d22eec8ef9d2d3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,750 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/1c/ac254f0a00b9739d4587df65f030cd15783f57feb996470cd4664e24e8b2/pyhmmer-0.3.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=176c8961395d5bb22bba5d09605b89f8c2c436ebe3861937b3e7f6307cc00a83 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,750 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/fb/d87f9c26a4b58ea330e7936c4f59f0d8ecfdbc1e76aed60eaf5dd29f04ba/pyhmmer-0.3.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=4a74af470a832fd2d17641bed3221a3e1d2f7a2c8734ca44cbbc45cc74e62183 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,751 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/15/82f4a4b0da12cdf0d044b6624cefa7cf563a60666a81196050b9f098df71/pyhmmer-0.3.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=b7f24288645f5bb8566b1a1ec9229d2805922daa9dc3ad0f89a020864da4a4f3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,752 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/c6/3990e6ea23334f641730885bcdd1a2f304a2149d9f4f6f64654de88a4693/pyhmmer-0.3.1-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=d38a113137a9eae2ca6f77b0c45b19b3252ae41a7922bf2929cf6aea0bf54665 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,752 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/8e/9bb0b9dc14993637bf411158a8a74498ab297d9207b27163b88025846d10/pyhmmer-0.3.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=4f27f5790effadeb59eca50ac19ddc9c05a7ed3369824cd259a3504401c230d4 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,753 Found link https://files.pythonhosted.org/packages/9b/00/3a84465ed08c531aa7fafc575f16840c94a75bba9ab4cd2b46e906f0431e/pyhmmer-0.3.1.tar.gz#sha256=12601de3ed60d123324c1c080c91ab43b8297a8db297fdb5842f99a2ea755d83 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.3.1 2022-06-28T20:58:41,754 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/19/9d179de61801cf015e36b58915320bc456482b86001c9e5de25cf56f7e69/pyhmmer-0.4.0-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=642dccf7df69ffb2cc48e11d251a6b2b77d40b16cb477b494debc33e681559ec (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,755 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/05/7fb226eb9c2131dd60bd56f0077e006a4e51da51272d92163b62ca4f8eea/pyhmmer-0.4.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=bc30b1d1d4d62e8bfaccccca58bc4e06b657799c656b40bacb44f6a17d03a1bd (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,755 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b8/47/dab7312b5280c80fbac69470200fbbae5056dfb4db0fa460d4624f8530ab/pyhmmer-0.4.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=ec612b28e852632cef8afd936ae8cb300ea25a393433d6d7bafd459f3cee9705 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,756 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/8a/0383377b9fde608c63c61bcde44cb8ea0c43b24c2b719bd2292201e08d6b/pyhmmer-0.4.0-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=358c9c43e4390cfdf2cd09d21945f402c99ee0e18dd7913aa8e10ee8e1f36b2a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,756 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/4c/1d63e605113d666e52d17d7e73201b3313640577f5bef5207a6bab7b06df/pyhmmer-0.4.0-cp38-cp38-macosx_10_14_x86_64.whl#sha256=78aab494713096bc935d79a7c6571d96cb1b626b08e2ed281d08678b0191ee0a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,757 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/55/929caad4036f3d97abd41694b19b773313afa4fe6bece2619bcd6cf81917/pyhmmer-0.4.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=279e52f743beb434f1b9e8d117ed8f6e5aa51744a08c7d19f2531173db1ada91 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,757 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/3a/f544d871dbcf4c96751941cce04f2d877ea48505e5af223dc40f723c442c/pyhmmer-0.4.0-cp39-cp39-macosx_10_14_x86_64.whl#sha256=bd09be1859a59c9167a32c89503c154362127e91ec05871e44c765ea2b7d1d25 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,758 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/bd/9858bf2ec674d3a6470534bc5146583b7f4667c337fd0c73292d0d1aa6c3/pyhmmer-0.4.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=502dea813299efd84b1fe8689bcc90472836b6644da8c081a384b4109b133b0f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,759 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/f6/64fc4c3df308f1d50c90469090967e8d5acfb55a9c4bea7bcbeca33aa95e/pyhmmer-0.4.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=73b729c33a2d55c370d36a3d4bef174191ea03987e53262348ed73acc754c84f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,759 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/f8/5d58d4f3f80c970010aea222b958c3f2e04a970c0573aa675fa805394f5a/pyhmmer-0.4.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=180f5ebed6912855af17385bd9ebf3d8062606b4eeeb8cfe70f30260c7ea62ff (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,760 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/f9/99d353372602557b78b6aa0ca04ae84b09cf38e1ae17a8458efc9167c571/pyhmmer-0.4.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=af72b48f2c9afba5e8ce995cfaab5a8b2506e46ce3b2a9948cef7e29fd43a0b7 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,760 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/3d/aa40c222382ac833fdfa24f9bc443dd5bfc0e0ec44ad401a6df701beb555/pyhmmer-0.4.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=cc511eb49f69ff1472f8fb7f34c8ba8e268bd5169b12a9a045211b8906e3826a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,762 Found link https://files.pythonhosted.org/packages/b8/54/9ebe75c4056daa0c0eb9f2b11fe62361d3a8b5e54818a528d8ca509e8986/pyhmmer-0.4.0.tar.gz#sha256=44401f06742c281c592d925e9ff737c63d885c9405d994d92059249eddb91b21 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.0 2022-06-28T20:58:41,762 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/f4/575177c27da35c5052bc8cfc63454f7af5b948e89f3d9350cb061c3fd679/pyhmmer-0.4.1-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=d4fc6c74a77ae34a746e72ff3a283c9ba714767734c8515196c90e85cf35d0a4 (from 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https://files.pythonhosted.org/packages/02/a8/8b04beee17f5087bd7c178fa5e1cb4ee877755dd1b0511206b6632548c29/pyhmmer-0.4.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=0dbc21004dca2259738e95042d09425ec20f0d0adb46d699f903353e931fd5bc (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,766 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/08/fde1653784e16bccae316a78694011f0cf56fe74706825db29840d06e087/pyhmmer-0.4.1-cp39-cp39-macosx_10_14_x86_64.whl#sha256=56a36fca88ae34a2f599dae67a2b771d6a16e54aec783e9a93df13f60a154499 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,766 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/bd/08e876d81d61cd14279d7cc453060e38df9c59282b389c2789bd7742813b/pyhmmer-0.4.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=25019eba70035d9a77dfa4050821dba4c6d3e9bd154d868f9c60fffb3100068e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,767 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/84/f5/5f83239790be66db9ea89781295020172d20ccc6d1262f4064dc2c1170cb/pyhmmer-0.4.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=7885a4c564b06b13915fd5d3bdb54bffa2ef51d7770fb5bf53c2da873d16bbdc (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,767 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/35/55/bd514b80616381411b763ae1a275d384bb2261abc06f8b32e95dedf7aa37/pyhmmer-0.4.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=e2e952f97af9058f12bc679e564df0112592a9cda667b424080101991b0cd6cc (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,768 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/09/c5/f6909bd330534d7afba8a9a3c4618ec0bc31510ed253d98d18b38d886120/pyhmmer-0.4.1-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=1029384ac9a601d2b8e9f4d8728fdbe82f973969b840cab4a63f08be0410e313 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,768 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/94/8c/cdb2dc2c6e4427ad1c2e0f0a2975d909444e0d7774d45a09df331f5bef53/pyhmmer-0.4.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=f6158d85c1d099464c759fd393c31296b823ddefb740b0c31398edecef07c538 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,770 Found link https://files.pythonhosted.org/packages/61/90/4a9c6bf89ac154d48db2cee3bc238d00395d80229e6ac24e6e3b576b5856/pyhmmer-0.4.1.tar.gz#sha256=8100fc4928be489eaadaed68e1306c30a49640f0f5addb6181b5ffa0c46a0cbb (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.1 2022-06-28T20:58:41,771 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/48/a36c888751b3dd9eb63c3c1c5ed163a6d154ae00f77d18a044e3fac082d0/pyhmmer-0.4.2-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=8600f38d7eb02aba96b4051d24649980c2e5dc899fb23adcb5edcca0bcee033d (from 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https://files.pythonhosted.org/packages/8a/aa/09b2d512f1b75ed279317eba38e320204f0cfa49094f83211aede16286ce/pyhmmer-0.4.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=57b59a9ff04b3475d440c75c472a45ac305b7ce73ead067e85153e435a05dd4a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,773 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/21/3a09a81de850eb81ab720eb05bb1d1362070b1cbbc6a6b7b1edf701920d4/pyhmmer-0.4.2-cp38-cp38-macosx_10_14_x86_64.whl#sha256=31ef346ba88cda4d785aed2c69be14b4dfd3508a2377381670426729ee0fa214 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,773 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/43/19411901fe99dd7038ebb98fabd2b79062b2944bec551d0b06bd9909adc4/pyhmmer-0.4.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=4954413993e48b65d6e40a2f82debdb0b176843a89e16ae7746aad173d50565c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,774 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/c9/ffa040555c4ae3673221436506c8c272c22a53bd9e6a54efe0157d9c2972/pyhmmer-0.4.2-cp39-cp39-macosx_10_14_x86_64.whl#sha256=ceabe0d00bc467efcfae335e1c565f70111002cb07038912e6b8b67dec4f1b14 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,774 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/06/a2fc008cfdd553285325cf8373f3b6af85bb7cac0e294f45948bf1f282aa/pyhmmer-0.4.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=2d6cf1902b07d330df6a64bc11ce3b0e09a2e7b6ff7934c9e804707dc27d635a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,775 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/dc/0ed9ba672cc508bc15b4faf62a6444434e824ded77cfaf60662d90cb9601/pyhmmer-0.4.2-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=d4c590729ae0e04d92f2de18a2ef7abe8f55855968dfdf6c463ad5fb32026750 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,776 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/5e/212fe49995ccad358150012abf2da8ffbc25f024436b6fdcc89173e95b32/pyhmmer-0.4.2-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=bda410a3cc88d5e4817bdcb99b45e56a0c6ece9bbc40886345a2ff0dc22cd6ad (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,776 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/9e/486d5da6d404842d00eabfbb1d7a25ffc0c49503dd7d267f1a6a701840e5/pyhmmer-0.4.2-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=27203e1a526fa03fce4e8e20cf0361bd63a8c6e9e509b1e1ff5521fd73231f1f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,777 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/88/b8bb0c20875f4638bb7d600c4c3dc65eb742b3a9833c730aa4915e94aa9a/pyhmmer-0.4.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=b8e9937cae9d37f850a3d68eede5132ccdadacd00cb4349977769eda97a179c1 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,778 Found link https://files.pythonhosted.org/packages/2f/93/fa15885ede25f87ac2fa5e2cef12831bb8747b7e8455982ca2942ba61c7b/pyhmmer-0.4.2.tar.gz#sha256=86827f9a7224ef6e23bf987a2c1774b23b5ba9cfed49f0698d07211c45905486 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.2 2022-06-28T20:58:41,779 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/da/5e42fc076686aab8588bafb9d3e5c97a6c8bb4b24060eb943836c303cf11/pyhmmer-0.4.3-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=b64af9e2852edd65d143df8407b9f8eea29445b39ee61724de5595fa3210ae93 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/f6/9a/8df126ab5ccf2278e9b3414c26f53bf01b480164abcc11c9d2d56d9f67f4/pyhmmer-0.4.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=ffd6a328a2b83396c52d8f5e095239358b8fd84d1a329c4c6b182a1df47920b2 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,782 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2d/63/9e0ac76ca6baae6f288983a7af56de078773b5c0d61004419d1319197f61/pyhmmer-0.4.3-cp39-cp39-macosx_10_14_x86_64.whl#sha256=aabfa05cb4d2b9b0420c86762010a2ca525f84d8c9413a89d2cdc1304905d768 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,783 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/ff/ba/e2347228e6bc83d22820f46bf33ed8558ce1128a60128edd2b9bd770078e/pyhmmer-0.4.3-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=4e1436704face13afdbb44817750f7005da5c5decd9a8035315f8b745865bf12 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,784 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/9a/d5447b14a91a994bd2ec38a1a4880c29c93bce74e1aa7a328a794901a870/pyhmmer-0.4.3-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=e5efab6733024019821f63795a318efd56ea6243a475becd8139eba3c528537c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,785 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/eb/87/8074c4e8896b87ef161b2490f525315f70c4783e567cfc15679bdab1f059/pyhmmer-0.4.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=18364cb8f9ebb0526ebff164290780d176d0a4c704816a099d5329b1b26bdab0 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,786 Found link https://files.pythonhosted.org/packages/4f/77/3499166ca2e4ca1b8736bebd9082787c5bb88478c98fe14970e88cdecf07/pyhmmer-0.4.3.tar.gz#sha256=c5b4b8ebeb1d416c566fbb46a95253d1b5f8f852680c28a87fc71fe4c64034c8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.3 2022-06-28T20:58:41,787 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6a/9b/b6aa00ca89a0f7a238d2f23a241416e7051d7ba24fe7505d1ec33c7a21e5/pyhmmer-0.4.4-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=ba175d49b53d42ff7019bb537a605dde72255abdfe2a3e8d878284579c5e82c5 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/b9/b0/666d105f9f9ab1881952962ae9e84beb7f4537b00deed7fda9b8ec268715/pyhmmer-0.4.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=bee560fed96764b2d31d1b5a3e2169c01a17a5c73555126b0ed06f8266b02f7e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,790 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/a1/4daf57b4a7e354dfb8ce1a4083926a7383e056d295fad8a1cfbf53a2ad0a/pyhmmer-0.4.4-cp39-cp39-macosx_10_14_x86_64.whl#sha256=0f37bb5624d5b10a344047a327bd0f5cb22fa0f329c12ac028716f740c85ec5e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,791 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/db/b387ccecb8c04aa6caa5d8ba9e2554d3e2c4e2b098b42d17c4f9369d572c/pyhmmer-0.4.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=8e1715b84ce692f42f4b1598ea146c875c515b761e35d9c7179f1b45a815a594 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,791 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/02/c2ac022076a9b264f91a0f7e6b08a89934d5e1435943cb8b39304cdb7447/pyhmmer-0.4.4-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=4283380494c92719158778415e0d89847825d39ad99503c6b45207b47ac408bb (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,792 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e9/d1/2c4a7021f650815ccddea11adf8506dba8590d6f1e1a82050766b963fe5e/pyhmmer-0.4.4-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=a1c958459f2800443ff8040e5613dc7e31007a4a33205f2586c4f0debb0d0344 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,792 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/78/eefaf55976164ad3550c2f76c6e9c732d79b7c68e1abbbfa98646d756a86/pyhmmer-0.4.4-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=43794a55f4c11ec638e5828c18bdb4040dc9bd9570f0760785d6c858f1ff3f6c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,793 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/08/8f9539ba0d0e00aa7cdd16db85ffd3ee0716b515167d95efe68b11c0f583/pyhmmer-0.4.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=7564399afdaaf25e85bf3373f9f0f563455419668d3662401baa0adb71bceeaa (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,794 Found link https://files.pythonhosted.org/packages/59/cf/064c29541b6805d8ef36046f2b0764c4ba246e887a2e263226359bc2776f/pyhmmer-0.4.4.tar.gz#sha256=341e75d407f3fd9d9457e1e62fedbbe7eecd64e26dcb4e6e1f06746c89a4eb1e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.4 2022-06-28T20:58:41,795 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/ad/76b4338792226f636651db9e66611a539847463a0f2265a571a24487fafa/pyhmmer-0.4.5-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=710450e0371ebc4d4950f01c8232f39f42945657d7054f8df131a05ef9b33db1 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/8a/3c/c22f961311a96364b2fc84ebcd25ee75ce9111f27c9eaf48c1faeeafe8c7/pyhmmer-0.4.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=6c8cfde2a6ab3dbf4c0a224b0b9fc4d784edeac79b297a5e40823c49be738de6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,798 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/94/33f25a0d8f7761ac55acd5839c50078efe810b1e1ae0006113ca92c58d90/pyhmmer-0.4.5-cp39-cp39-macosx_10_14_x86_64.whl#sha256=993a382798ad3403e917a38b1d21652bb5613adf76fe0548d0702e67ba852f5a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,799 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a3/c5f8dd1e931959d9c38df19fc937c6cf8568174e30ea2c2a86849cbd4b01/pyhmmer-0.4.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=224449b5f5b5ffb361df96f65a581521436c7897d520412415b40b99777a78ce (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,800 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/36/0407821105d77948e7d703ee4aeacd2cead5cf317179db06508f7cdf7ce3/pyhmmer-0.4.5-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=e293f30405f1efa0fb288b3215ef07f2c4c61d312443602ae071659fdf29d82e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,800 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/8f/9e/c179587a659325aa519390efba2fe7775178a111888fe32ba0978fd91205/pyhmmer-0.4.5-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=fe9d71f3ca41143af439523ddc0b81624089802ebdb1013b44ea6f03bfdbbf9a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,803 Found link https://files.pythonhosted.org/packages/c3/4c/926f71ac0913fbe2426f5f3ac8071edb4e700591b690c4acbaa7b559fb38/pyhmmer-0.4.5.tar.gz#sha256=c7360c2b820e119fa89cb2d5d1c8d79e26ed2d4b182d6b9bed0a96cada9866b3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.5 2022-06-28T20:58:41,803 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/af/85534ee68bcdcb07d92d7630536659edaf435f0e7f8784189c53af637228/pyhmmer-0.4.6-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=f97880034242607413f51303eb4e0b3c829a9fbe580fea28b459201cc6f5969a (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/3f/87/171796b7139a8a44ba960344487f474d65bb5f16c21a088bede3d3cdec33/pyhmmer-0.4.6-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=bf985e7e71caac278fbe385c3ea3ef17adede420c6af74da082a7e12bc0bb02e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,808 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/b0/5d0f1b002f50fc531485e8691224de277d329d293bde922a35f4659e73b8/pyhmmer-0.4.6-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=1543769357b42bd6d66cf0d258fa24d8ca1a906116efe5075ac41e7ae028288f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,808 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/44/cc860850904897b27fcb884a05986159a1ea08e238150aedba27f5c2a8ab/pyhmmer-0.4.6-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=8507660d9a24f7fc171b1b693fd940a57299b6e59e243def342f2d266040b0eb (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,809 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/14/ced57dff0f434c8fe2d84ed1f74b33d0dcc8b8dfd3b3a9ae9aa59f3d601f/pyhmmer-0.4.6-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=ed17d50c7daa8725c99cf44b8c71eb3c43f4b8d4a501baad65896def3259b88b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,809 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/80/ef4da6ee20a7937f2a3e3c58bf45519a91890feda2461bc18f353ce70fee/pyhmmer-0.4.6-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=f1aeda2aae853e77f3cf6d7bcec621df6fbf20852255b517e1898a00c64a67a0 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,811 Found link https://files.pythonhosted.org/packages/bd/5f/6e0db077ed2e1073b9fe7c4b18df5774bb86c2aa27f191713cd3f3aab53c/pyhmmer-0.4.6.tar.gz#sha256=d6bebae6059fa9cb56c6ae81a1f4bfead2d7db1a7b7874253e0235904ef98fd8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.6 2022-06-28T20:58:41,812 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/26/20/dc39dffff630017b87930177ac6c5e7d8621d57feca523d60c631609cb49/pyhmmer-0.4.7-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=64bc2f4c89bad2340056d8529eadaff5525ef09989358bc929da3ff0ed77c8bb (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/d8/6f/d70ebea12581688dbcf180b983186e3d3a8ad2325cc8691c837276bb3e67/pyhmmer-0.4.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=eaff5903cca9abba368ccb83d637be7b05d0d604f7d9568b7c8c8b64ff045c37 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,814 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/35/0c72fb32b8c75526ca61e74b835254a36a377ca9f7d53f33c607f7fb27a6/pyhmmer-0.4.7-cp38-cp38-macosx_10_14_x86_64.whl#sha256=e94675a5dd6a23767f8400c9f14b93af8e52893bf163705cbe1c1aed0841309f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,814 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c1/9f98c0bc9356578c3c4b14fd45a738acae7f7940a8ddc8342a8632734a3f/pyhmmer-0.4.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=dabd13d84e83d72fb2202b8ed79c1d5db32d9a86313260fc7605eb4da852bd3a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,815 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/1a/9605d23785ef8dbed1109f79c3797d2e417bda20e9207a4c8156609c808c/pyhmmer-0.4.7-cp39-cp39-macosx_10_14_x86_64.whl#sha256=cf69781b7f81751d6ae8ce2144bb8412fbd7e15df834ea143dc4f402a8a638a2 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,815 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/28/1373677589c6dff86a9c29c5340ce8f17fea4163530ad63d8c2a4a54141f/pyhmmer-0.4.7-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=cc81e9dbd9a18a95d152dbfabb2b8887dbbd22544e86f40632004680c4ad3748 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,816 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/20/89/62ec67b2d2c1b17a61c6ac8458eb95c31f28da3c69920fece52325ce6a6f/pyhmmer-0.4.7-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=3ce56892db8bb6e5574d54b6ab4b7ea4308d518e09aea03feb9c97921a481a6c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,816 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/1e/dedaa65e0af9d9e0e2e3524fed5730187f0241d75ae14a30c537aa0b06fc/pyhmmer-0.4.7-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c4cad8d8a7c0008f8cc63f888a370450c09919b9d39a013320ee0709befbefa8 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,817 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/45/d5bc13839408fcd2026afeef68619db2ea343d3a9add651214c37fde69b4/pyhmmer-0.4.7-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=b66cdda3eb7e3f95d4985abbf0f02471f05b157696040ba3ccd05b913cf5fbeb (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,818 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/04/036c8ea00e8388dba6b116f4914df1065d7856f786d5c6458a1bd1ec6576/pyhmmer-0.4.7-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=15a7739fafc18ab82c3a41d0e0b00f52a0ef033cd3ab7efdc7535da914d6421e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,819 Found link https://files.pythonhosted.org/packages/f1/eb/1328eb9c4ca58a684b9b210a51636a5294e6f6019675b0181c8a9c567ea3/pyhmmer-0.4.7.tar.gz#sha256=698c428bd694ea1df55f8d18408cc6d92348623d2a0098a5b09e26c6c1049c71 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.7 2022-06-28T20:58:41,820 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/60/97c5cfc22bf1d26475087e45455641599ca1e2910e670d9c72604508aee2/pyhmmer-0.4.8-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=e908e95cab3c2f7b7a34b2adcaeef2f5d93625c2266ba824103c81417fff8a0b (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/a9/2f/2ffaf5d537ff04d90b69c779d2e4d060630f29b25fbedb95a76e6a0ca195/pyhmmer-0.4.8-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=1ab004648077286f69adce88ae0125342af841fe6c8fd7e687ba9c93df7b8d9b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,822 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/e9/d607ccdc5e57e8bfdaf1eec1fe51bd434eb57fe61fb80d60236519ee4162/pyhmmer-0.4.8-cp38-cp38-macosx_10_14_x86_64.whl#sha256=eff5cbf8d58bfd4451946678d5cf46ba6da5f72f91ad19fb2de772063bc0952a (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,822 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/de/6af96c7b795c643e27fdb6518e64c74b7c1c6cdb7624e15c040bce58f9d6/pyhmmer-0.4.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=c03661e1a29eac46002ece005d1d59985c2243648426b84f0604ccc073c4857d (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,823 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/ec/918058530f70ad9b58ec9dc1638115362f59cfb9f5ad584732fe290b8dbb/pyhmmer-0.4.8-cp39-cp39-macosx_10_14_x86_64.whl#sha256=2bb106206ac548833ae8b734870f7dbba8d1cb5bc423251ae884fd43d5239a7b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,824 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/42/4a8ec9fdb0e57cddff194646e62360e73f6a57a3d339095df6572af0f935/pyhmmer-0.4.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=7db254141d2502c222ef2820a5096568812dfd9af101d235bd718f8713dc581e (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,824 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/68/8c577f9574bed3ac3017a76bf487b76b80c784163a9ddf15e14db3a84adc/pyhmmer-0.4.8-pp36-pypy36_pp73-macosx_10_7_x86_64.whl#sha256=e5db5678a9bfbd25e749593f38a4b867f43283f832cfe42fd3809c19036cb1c0 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,825 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/57/b2ed0c64308941872e2535eceeafb737b4871e507d54b5d68b6ffc02f8cd/pyhmmer-0.4.8-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=12bbfc25b2f24fb64026783584fd63f4a90b94d276ae9023161edf9e3c84ae6c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,825 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/22/099da301d77a3f512bde56a54fa5272e937818843f8be96aa46089071f4f/pyhmmer-0.4.8-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=56e05044eb91e5ea9ac793a86e4673cd1123e80b9dd9fb30fa3b05558c572ab9 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,826 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/76/477e37aee671104bb5d1022eb0ff641ce700d639a36961694ba9710af8b9/pyhmmer-0.4.8-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=91d0e84a7530594cdb73e0800ad49e2f41bc2bc2fd8213d448b94a68048322ad (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,827 Found link https://files.pythonhosted.org/packages/5a/91/1166980fd7eb5106ef2f34ede5ae0043daf2f276f05b0e9f93cc2d968827/pyhmmer-0.4.8.tar.gz#sha256=5bf8f5a57481b44a9a4cb382b0b00fdef49b9d73e71f2e39fb32da3a655512b2 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.8 2022-06-28T20:58:41,828 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/97/4247b2ab3b52d8ab9d4fda6619c93d428c4e364ebea041e93b7236ade4a6/pyhmmer-0.4.9-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=9230a5cf068957a280bad132ca81d94e5af3aa296c3f41dc1ea72f3e63f5b287 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/9d/46/ae84e7ae14e9b3e8026b796471844959fbb6f4043c1af329dee1e9f702c5/pyhmmer-0.4.10-pp37-pypy37_pp73-macosx_10_7_x86_64.whl#sha256=909f22fb0ec5d5a9e7f7d2365c590406d4fd5197f7c8457e2478bcc9a0cde02f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,842 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f1/6d/ef6e6e92eb4925da759c64c881ff811f5ea4073b826b2466fe08a4ef1698/pyhmmer-0.4.10-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=b13a2f99cf6762ca1aba87a637a114af4cc7ddec51cb0dd442e018c55e442317 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,843 Found link https://files.pythonhosted.org/packages/41/d9/e68b956d0a82e66223ad23fd46e15bcfe535809fe2c7fe38dc4f324c066c/pyhmmer-0.4.10.tar.gz#sha256=6e4c3630837c1322d1bf83ed90e6a04a6d6c43084bef480439c334adf8d36ea6 (from https://pypi.org/simple/pyhmmer/) 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https://files.pythonhosted.org/packages/63/9b/dc1fc0f379310382669aad49b6281cf3703f46662fc8d968b0b9ca0d7e8c/pyhmmer-0.4.11-cp38-cp38-macosx_10_14_x86_64.whl#sha256=8e66941e03a053c16c424a1392e15f83bfdfb30f2e5c24278d948de28cc14594 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,848 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/54/4cba0bf00660fb32bc4e76006a76b20eaa4f694f49f37994995c6b0a4e1e/pyhmmer-0.4.11-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=2c650f2164177f33954e43ec991b5fd58c284fa281790fa13cd0377a41b4d3c2 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,848 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/a9/ab/d4ac37a66e6344b641cc4f5bf6a99f55a9a4f1424a63a214a7862086628e/pyhmmer-0.5.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=2d32977ae0cc3e8a54446d01ecdd001c1977794f80a445cf9f5c177261aaf9b1 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,855 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/57/1488737434a2bb61340ad3c0fc732fedef52718dca20931ed2617e66bd07/pyhmmer-0.5.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=5444afffe348f8c5680e5e7f3b7ecf2f99ea35342e30bf704dd6bab2980797e1 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,855 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d3/d4/231efd3e3d8130f57875939fa9cb21160b8edc51f1749eb989673c9921b4/pyhmmer-0.5.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=278930e970cbf9cb7128c83b2e7061b7a19aba1deea5c5c0ad5cd30dbe020278 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,856 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/1c/5118252d96ee71ccad56ad081fcff29e7af31ea85b9e94b97911df3db5e3/pyhmmer-0.5.0-cp38-cp38-macosx_10_14_x86_64.whl#sha256=9b7e2a37cbd857c0c45207530c65e2ab795a1fd006e90c31641075a54576dfbf (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,856 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/e2/9bdf705fc5813f94d82ab2dc71ee9f07724caa43629235a845bc6120b5cc/pyhmmer-0.5.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=0a24ae52140f4cecad4279098faed378f5016028860c41727924f69054a029c6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,857 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/20/0926ec071a4373f167f1c3265c1fe4d2ace1d71e85e6b37bd8a66dd31925/pyhmmer-0.5.0-cp39-cp39-macosx_10_15_x86_64.whl#sha256=55bef8b32bf09b6f601a4a4c8827822811f94e5b8cfc9fb14172cd08c6877697 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,857 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d1/ab/7448d935505b12a4a865f273b51c5e6a63ebacc6d3e98acb23b2133c1c8c/pyhmmer-0.5.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=a5923611a955ac97fc316051309351faa348ef40544cb2abdc31aeaeff856962 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,858 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/15/f3b826ba98bfbc9386e628d9b6fa5237a0e761274a1e84a6e1042fa55784/pyhmmer-0.5.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=91c1fc2604a4d0bbcd9cea4e6aacbc417721b3c019768552fc048820bcf2174f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,859 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/e6/77a0ac512c431181dcb2ea9d41912a09518dd4514689bcf035a31576e479/pyhmmer-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=f8bcf037ec426fda1d9d657f44912c8c14c40bc3f2e2538bec07144a9b30d911 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,859 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/53/3e5af9674d0cb1bbe737f2253f9ade02ccb8d84835568e6d76c2de00e3e1/pyhmmer-0.5.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=6097b66d8f05da2634d0027d707d33762c031b730c3f4e3163512e377378ca25 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,860 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/8e/3030e8640238fe995a33b34bbcf073e3c37859cb8cddab5badde1c9f698d/pyhmmer-0.5.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=998b7a5e70e879215e4384efb3e5308f18d698403c062270ef595a39404db727 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,860 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/37/f35d1b12f6758bcee4c013957c23e7719e1db5795f37bf64e4367b9992b8/pyhmmer-0.5.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=da070428c619b1206968655c526847397b296513e112d42224484c88216ed994 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,862 Found link https://files.pythonhosted.org/packages/d4/b4/860e63999b6827d880f4985cae22adc88e92ab2e2b06e954abb60be2d411/pyhmmer-0.5.0.tar.gz#sha256=1d644b618b622c3194381faeb898c721b641a3e1a586a574ea6ba04e9ade71de (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.5.0 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https://files.pythonhosted.org/packages/98/b4/4fb7c0d1956678b92ba1deac8e1f26fe6391e362a88aac7a1c6743fa85e2/pyhmmer-0.6.0-cp36-cp36m-macosx_10_14_x86_64.whl#sha256=4f24ef0a662387030e8476666c34a64613a7e53cbc05f1c308a55f18aec58c8c (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,864 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/aa/cb/e9b4113ab1049e1f13828043ee41dec823111fa0d1ba95b8ed17aa2479da/pyhmmer-0.6.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=491ee8ec3ba784571a42e711d331a29a268f9584bd0e39c4012d625ff1002b95 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,865 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/16/950a9891b018accdc4cf2eac23cd4b2cc64eced8b6774a206ac9bdcfe79f/pyhmmer-0.6.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=0ad2559975cca19011be9c89bb1c802865a154aead10699e7a2e5ecdd468954d (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,865 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c6/37/9e560cd8eb371df3b31e9e60b9503b51155607f8ca1948cb4009a0c47519/pyhmmer-0.6.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=1040559f17eec8fa3f7f0a19138c3bbe79a67238de4e89b0967569af657de545 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,866 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/85/ec2e8f9b2eb9ac3c6a71f1a9cd29c43ffa2a0bdf23da96dcd6c8135b5a88/pyhmmer-0.6.0-cp38-cp38-macosx_10_14_x86_64.whl#sha256=a8b1667d4e90eab1aedc744840d7e104524f209b05c9fff5e35ec5e92c0f65e6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,866 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/6a/8a3467282158fac08ea0dc646378789abe5dfa9e77af5f25a1fb658e3a3e/pyhmmer-0.6.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=0add9591449fa3ba7e00694a4f6e7bcbf8ba3fdfd12968696cde45cd48d181c2 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,867 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/24/e5cba7b51dc391c8bc45dd7f98e61804088f8cc35346b362dedc94fae471/pyhmmer-0.6.0-cp39-cp39-macosx_10_15_x86_64.whl#sha256=2c0462a34cb3bcc62f1bb861a79d84beea453f8df1b9cd947f5692a982c792ff (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,867 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/ad/68a14e424200099462bd97c58fefe3b428a6522ae11b2e2b195bbbd6d15a/pyhmmer-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=c0803280408fee9738b71ab52b29998563840e093922c11b5f72b88b486d52d3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,868 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/2d/cd5b9729a37b0cdbe932461c79f74c75d17ac665f080f95633a8c275852d/pyhmmer-0.6.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2d6880834f5aa4b48bf161bfd577a6496ecf26b26c14ce4b04c0781c735b6860 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,868 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/e9/3a1f5a5aa46b482a3bca632fff9cb173c91ba5f02a96a3f5c0d730660519/pyhmmer-0.6.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=45b22fa4b8a70d1d687e4553192d29ee770de2b19c3c93a77dc2dd1b9fa4f58b (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,869 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7b/72/119583107572a60f86e0f8578a7bf5d03928eeb3107d3e469336c5c41245/pyhmmer-0.6.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=89982a0f9a3d6ee6671d2a45a3d26e27ad09620f0fca34b3f53f6a89098b8ecd (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,869 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/8d/2743d1944b793b1182955de2143776ec786c239e6c69fb8da18fb4db17ed/pyhmmer-0.6.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=9f00ad4b7fb881394a81c3edbf76e04dc20b07b78c2e0f09e48f5f9b2b2084f3 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,870 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/e5/7dae65e0e3f3724535d49307db46975b4eb1bc62cc77a1b2dd26ddc308a9/pyhmmer-0.6.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=678f2898262bcc9eeb8969033937bdeae754cf3583d7eb1fa63f2d94853e663f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,871 Found link https://files.pythonhosted.org/packages/66/34/775e5243113c2d97ae0ed9e6a39f145549bf85c6215840b728fa9a3f6b89/pyhmmer-0.6.0.tar.gz#sha256=9579b481e09387b97548aa7fa8920f3ff143805849e146118cceeeff27ea04e5 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.0 2022-06-28T20:58:41,872 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/87/0d2511754cabbe05b89d15eea01a63f886dcf4697934c121df79b47a281a/pyhmmer-0.6.1-cp310-cp310-macosx_10_15_universal2.whl#sha256=f26eb3a8d7634a2d64b7c9ad2d3ac51d2df042aab97cd40999ae41f8620a3852 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 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https://files.pythonhosted.org/packages/27/82/c9dbdf556c27204f3c7452f3dc6360b3d6a5a7a9d139a6dab992a0a33af6/pyhmmer-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl#sha256=9040ebd26b9b8be11c57921bf104bdc657a9e4c7c6603f3e16423267c7993f21 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,878 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/00/ba/e4a5a835581363c1a6809656518b2b5bf2b668d0cc8bba6a91aaab864023/pyhmmer-0.6.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=670da2fe6a1d3a03d8efbce28d6454979f8f31095730d136d49ed12ef46cc0ba (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,878 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/60/bd4cf94201733ee99960638e205d34547e1814a7fb95d2d5fc84df6c6423/pyhmmer-0.6.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=d6395cf3b64902cb442ac6b05948c47e5ebccf78c465a618ae787927977cde87 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,879 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/53/f6a6fd098e6ac64f2c0060e2e8696e573197898751b42fde2887ab62fe73/pyhmmer-0.6.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c09565a0bfc1eab5422c4391557c0abd06c5716cf47fd347009acf29661131f2 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,879 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/09/be194e9996ce5b9b250af009792194de38d5f38537a07b787d77bd7c2020/pyhmmer-0.6.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl#sha256=88725674808cd30056a1902387368cec658cef849a2bdc9912cf6d16f06a7f75 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,880 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7d/6b/d6adf535b346904db4dad94b57101d495fcb2a1ba2b0cb9a2b9b5c11aee4/pyhmmer-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl#sha256=dd04fc2be36e70c739167b412017dafcb3f404a28ddac3068b0f4423bf6617c6 (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2022-06-28T20:58:41,881 Found link https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz#sha256=ab0198368cddc171ff229f48e0245ed7f263ccf37a836313c833360811ac642f (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.1 2022-06-28T20:58:41,882 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyhmmer/ 2022-06-28T20:58:41,883 Getting page https://www.piwheels.org/simple/pyhmmer/ 2022-06-28T20:58:41,885 Found index url https://www.piwheels.org/simple 2022-06-28T20:58:42,106 Skipping link: not a file: https://www.piwheels.org/simple/pyhmmer/ 2022-06-28T20:58:42,107 Skipping link: not a file: https://pypi.org/simple/pyhmmer/ 2022-06-28T20:58:42,151 Given no hashes to check 1 links for project 'pyhmmer': discarding no candidates 2022-06-28T20:58:42,183 Collecting pyhmmer==0.6.1 2022-06-28T20:58:42,187 Created temporary directory: /tmp/pip-unpack-y5nmp7ka 2022-06-28T20:58:43,322 Downloading pyhmmer-0.6.1.tar.gz (9.9 MB) 2022-06-28T20:58:51,712 Added pyhmmer==0.6.1 from https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz#sha256=ab0198368cddc171ff229f48e0245ed7f263ccf37a836313c833360811ac642f to build tracker '/tmp/pip-build-tracker-ugft54_p' 2022-06-28T20:58:51,721 Created temporary directory: /tmp/pip-build-env-xfrmg_cr 2022-06-28T20:58:51,737 Created temporary directory: /tmp/pip-standalone-pip-qyet95m_ 2022-06-28T20:58:54,095 Installing build dependencies: started 2022-06-28T20:58:54,097 Running command pip subprocess to install build dependencies 2022-06-28T20:59:03,784 Using pip 22.1.2 from /tmp/pip-standalone-pip-qyet95m_/__env_pip__.zip/pip (python 3.7) 2022-06-28T20:59:05,556 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-28T20:59:09,507 Collecting setuptools>=46.4 2022-06-28T20:59:09,768 Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.6.0-py3-none-any.whl (1.2 MB) 2022-06-28T20:59:13,342 Collecting cython~=0.29.16 2022-06-28T20:59:13,805 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.30-cp37-cp37m-linux_armv7l.whl (2.3 MB) 2022-06-28T20:59:22,806 Installing collected packages: setuptools, cython 2022-06-28T20:59:32,773 Creating /tmp/pip-build-env-xfrmg_cr/overlay/bin 2022-06-28T20:59:32,777 changing mode of /tmp/pip-build-env-xfrmg_cr/overlay/bin/cygdb to 755 2022-06-28T20:59:32,782 changing mode of /tmp/pip-build-env-xfrmg_cr/overlay/bin/cython to 755 2022-06-28T20:59:32,786 changing mode of /tmp/pip-build-env-xfrmg_cr/overlay/bin/cythonize to 755 2022-06-28T20:59:32,833 Successfully installed cython-0.29.30 setuptools-62.6.0 2022-06-28T20:59:33,556 Installing build dependencies: finished with status 'done' 2022-06-28T20:59:33,583 Getting requirements to build wheel: started 2022-06-28T20:59:33,585 Running command Getting requirements to build wheel 2022-06-28T20:59:36,441 pyHMMER is not supported on CPU architecture: 'armv7l' 2022-06-28T20:59:36,670 Getting requirements to build wheel: finished with status 'done' 2022-06-28T20:59:36,708 Created temporary directory: /tmp/pip-standalone-pip-_f9j62xc 2022-06-28T20:59:38,873 Installing backend dependencies: started 2022-06-28T20:59:38,875 Running command pip subprocess to install backend dependencies 2022-06-28T20:59:48,491 Using pip 22.1.2 from /tmp/pip-standalone-pip-_f9j62xc/__env_pip__.zip/pip (python 3.7) 2022-06-28T20:59:50,229 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-28T20:59:51,095 Collecting wheel 2022-06-28T20:59:51,130 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-06-28T20:59:59,111 Installing collected packages: wheel 2022-06-28T20:59:59,391 Creating /tmp/pip-build-env-xfrmg_cr/normal/bin 2022-06-28T20:59:59,395 changing mode of /tmp/pip-build-env-xfrmg_cr/normal/bin/wheel to 755 2022-06-28T20:59:59,422 Successfully installed wheel-0.37.1 2022-06-28T21:00:00,017 Installing backend dependencies: finished with status 'done' 2022-06-28T21:00:00,039 Created temporary directory: /tmp/pip-modern-metadata-z11axdu6 2022-06-28T21:00:00,046 Preparing metadata (pyproject.toml): started 2022-06-28T21:00:00,048 Running command Preparing metadata (pyproject.toml) 2022-06-28T21:00:05,422 running dist_info 2022-06-28T21:00:06,079 creating /tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info 2022-06-28T21:00:06,709 writing /tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/PKG-INFO 2022-06-28T21:00:07,312 writing dependency_links to /tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/dependency_links.txt 2022-06-28T21:00:10,303 writing requirements to /tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/requires.txt 2022-06-28T21:00:10,902 writing top-level names to /tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/top_level.txt 2022-06-28T21:00:10,905 writing manifest file '/tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/SOURCES.txt' 2022-06-28T21:00:11,682 reading manifest file '/tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/SOURCES.txt' 2022-06-28T21:00:11,685 reading manifest template 'MANIFEST.in' 2022-06-28T21:00:12,870 pyHMMER is not supported on CPU architecture: 'armv7l' 2022-06-28T21:00:12,871 warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer' 2022-06-28T21:00:12,875 warning: no previously-included files matching '*.pl' found under directory 'vendor' 2022-06-28T21:00:12,879 no previously-included directories found matching 'vendor/easel/demotic' 2022-06-28T21:00:12,882 no previously-included directories found matching 'vendor/easel/documentation' 2022-06-28T21:00:12,886 no previously-included directories found matching 'vendor/easel/esl_msa_testfiles' 2022-06-28T21:00:12,890 no previously-included directories found matching 'vendor/easel/miniapps' 2022-06-28T21:00:12,893 no previously-included directories found matching 'vendor/easel/testsuite' 2022-06-28T21:00:12,897 no previously-included directories found matching 'vendor/hmmer/autobuild' 2022-06-28T21:00:12,900 no previously-included directories found matching 'vendor/hmmer/documentation' 2022-06-28T21:00:12,904 no previously-included directories found matching 'vendor/hmmer/contrib' 2022-06-28T21:00:12,907 no previously-included directories found matching 'vendor/hmmer/profmark' 2022-06-28T21:00:12,912 no previously-included directories found matching 'vendor/hmmer/testsuite' 2022-06-28T21:00:12,915 no previously-included directories found matching 'vendor/hmmer/test-speed' 2022-06-28T21:00:12,919 no previously-included directories found matching 'vendor/hmmer/tutorial' 2022-06-28T21:00:12,919 adding license file 'COPYING' 2022-06-28T21:00:12,985 writing manifest file '/tmp/pip-modern-metadata-z11axdu6/pyhmmer.egg-info/SOURCES.txt' 2022-06-28T21:00:12,990 creating '/tmp/pip-modern-metadata-z11axdu6/pyhmmer-0.6.1.dist-info' 2022-06-28T21:00:13,195 adding license file "COPYING" (matched pattern "COPYING*") 2022-06-28T21:00:13,465 Preparing metadata (pyproject.toml): finished with status 'done' 2022-06-28T21:00:13,482 Source in /tmp/pip-wheel-1hv89nd8/pyhmmer_c892f60b122d4235979e8c2252ae803c has version 0.6.1, which satisfies requirement pyhmmer==0.6.1 from https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz#sha256=ab0198368cddc171ff229f48e0245ed7f263ccf37a836313c833360811ac642f 2022-06-28T21:00:13,485 Removed pyhmmer==0.6.1 from https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz#sha256=ab0198368cddc171ff229f48e0245ed7f263ccf37a836313c833360811ac642f from build tracker '/tmp/pip-build-tracker-ugft54_p' 2022-06-28T21:00:13,500 Created temporary directory: /tmp/pip-unpack-7p9l9umy 2022-06-28T21:00:13,502 Building wheels for collected packages: pyhmmer 2022-06-28T21:00:13,512 Created temporary directory: /tmp/pip-wheel-httoyb2x 2022-06-28T21:00:13,512 Destination directory: /tmp/pip-wheel-httoyb2x 2022-06-28T21:00:13,517 Building wheel for pyhmmer (pyproject.toml): started 2022-06-28T21:00:13,519 Running command Building wheel for pyhmmer (pyproject.toml) 2022-06-28T21:00:18,323 running bdist_wheel 2022-06-28T21:00:18,435 running build 2022-06-28T21:00:18,435 running build_py 2022-06-28T21:00:19,066 creating build 2022-06-28T21:00:19,067 creating build/lib.linux-armv7l-cpython-37 2022-06-28T21:00:19,068 creating build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:19,070 copying pyhmmer/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:19,074 copying pyhmmer/utils.py -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:19,078 copying pyhmmer/hmmer.py -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:19,083 running egg_info 2022-06-28T21:00:20,365 writing pyhmmer.egg-info/PKG-INFO 2022-06-28T21:00:20,970 writing dependency_links to pyhmmer.egg-info/dependency_links.txt 2022-06-28T21:00:23,931 writing requirements to pyhmmer.egg-info/requires.txt 2022-06-28T21:00:24,524 writing top-level names to pyhmmer.egg-info/top_level.txt 2022-06-28T21:00:24,602 reading manifest file 'pyhmmer.egg-info/SOURCES.txt' 2022-06-28T21:00:24,776 reading manifest template 'MANIFEST.in' 2022-06-28T21:00:25,894 pyHMMER is not supported on CPU architecture: 'armv7l' 2022-06-28T21:00:25,894 warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer' 2022-06-28T21:00:25,900 warning: no previously-included files matching '*.pl' found under directory 'vendor' 2022-06-28T21:00:25,904 no previously-included directories found matching 'vendor/easel/demotic' 2022-06-28T21:00:25,908 no previously-included directories found matching 'vendor/easel/documentation' 2022-06-28T21:00:25,913 no previously-included directories found matching 'vendor/easel/esl_msa_testfiles' 2022-06-28T21:00:25,917 no previously-included directories found matching 'vendor/easel/miniapps' 2022-06-28T21:00:25,922 no previously-included directories found matching 'vendor/easel/testsuite' 2022-06-28T21:00:25,926 no previously-included directories found matching 'vendor/hmmer/autobuild' 2022-06-28T21:00:25,930 no previously-included directories found matching 'vendor/hmmer/documentation' 2022-06-28T21:00:25,935 no previously-included directories found matching 'vendor/hmmer/contrib' 2022-06-28T21:00:25,939 no previously-included directories found matching 'vendor/hmmer/profmark' 2022-06-28T21:00:25,943 no previously-included directories found matching 'vendor/hmmer/testsuite' 2022-06-28T21:00:25,948 no previously-included directories found matching 'vendor/hmmer/test-speed' 2022-06-28T21:00:25,952 no previously-included directories found matching 'vendor/hmmer/tutorial' 2022-06-28T21:00:25,952 adding license file 'COPYING' 2022-06-28T21:00:26,043 writing manifest file 'pyhmmer.egg-info/SOURCES.txt' 2022-06-28T21:00:26,069 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,070 ############################ 2022-06-28T21:00:26,071 # Package would be ignored # 2022-06-28T21:00:26,071 ############################ 2022-06-28T21:00:26,071 Python recognizes 'pyhmmer.fileobj' as an importable package, however it is 2022-06-28T21:00:26,071 included in the distribution as "data". 2022-06-28T21:00:26,072 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,072 therefore is considered deprecated). 2022-06-28T21:00:26,073 Please make sure that 'pyhmmer.fileobj' is included as a package by using 2022-06-28T21:00:26,073 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,074 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,074 documentation page. 2022-06-28T21:00:26,075 !! 2022-06-28T21:00:26,075 check.warn(importable) 2022-06-28T21:00:26,076 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,077 ############################ 2022-06-28T21:00:26,077 # Package would be ignored # 2022-06-28T21:00:26,077 ############################ 2022-06-28T21:00:26,077 Python recognizes 'pyhmmer.reexports' as an importable package, however it is 2022-06-28T21:00:26,078 included in the distribution as "data". 2022-06-28T21:00:26,078 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,078 therefore is considered deprecated). 2022-06-28T21:00:26,079 Please make sure that 'pyhmmer.reexports' is included as a package by using 2022-06-28T21:00:26,079 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,080 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,080 documentation page. 2022-06-28T21:00:26,081 !! 2022-06-28T21:00:26,082 check.warn(importable) 2022-06-28T21:00:26,082 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,083 ############################ 2022-06-28T21:00:26,083 # Package would be ignored # 2022-06-28T21:00:26,083 ############################ 2022-06-28T21:00:26,084 Python recognizes 'pyhmmer.tests' as an importable package, however it is 2022-06-28T21:00:26,084 included in the distribution as "data". 2022-06-28T21:00:26,084 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,084 therefore is considered deprecated). 2022-06-28T21:00:26,085 Please make sure that 'pyhmmer.tests' is included as a package by using 2022-06-28T21:00:26,085 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,086 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,086 documentation page. 2022-06-28T21:00:26,087 !! 2022-06-28T21:00:26,088 check.warn(importable) 2022-06-28T21:00:26,088 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,089 ############################ 2022-06-28T21:00:26,089 # Package would be ignored # 2022-06-28T21:00:26,089 ############################ 2022-06-28T21:00:26,090 Python recognizes 'pyhmmer.tests.data' as an importable package, however it is 2022-06-28T21:00:26,090 included in the distribution as "data". 2022-06-28T21:00:26,090 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,090 therefore is considered deprecated). 2022-06-28T21:00:26,091 Please make sure that 'pyhmmer.tests.data' is included as a package by using 2022-06-28T21:00:26,091 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,092 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,092 documentation page. 2022-06-28T21:00:26,093 !! 2022-06-28T21:00:26,094 check.warn(importable) 2022-06-28T21:00:26,094 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,095 ############################ 2022-06-28T21:00:26,095 # Package would be ignored # 2022-06-28T21:00:26,095 ############################ 2022-06-28T21:00:26,096 Python recognizes 'pyhmmer.tests.data.hmms' as an importable package, however it is 2022-06-28T21:00:26,096 included in the distribution as "data". 2022-06-28T21:00:26,096 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,096 therefore is considered deprecated). 2022-06-28T21:00:26,097 Please make sure that 'pyhmmer.tests.data.hmms' is included as a package by using 2022-06-28T21:00:26,097 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,098 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,098 documentation page. 2022-06-28T21:00:26,099 !! 2022-06-28T21:00:26,099 check.warn(importable) 2022-06-28T21:00:26,100 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,101 ############################ 2022-06-28T21:00:26,101 # Package would be ignored # 2022-06-28T21:00:26,101 ############################ 2022-06-28T21:00:26,101 Python recognizes 'pyhmmer.tests.data.hmms.bin' as an importable package, however it is 2022-06-28T21:00:26,102 included in the distribution as "data". 2022-06-28T21:00:26,102 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,102 therefore is considered deprecated). 2022-06-28T21:00:26,103 Please make sure that 'pyhmmer.tests.data.hmms.bin' is included as a package by using 2022-06-28T21:00:26,103 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,104 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,104 documentation page. 2022-06-28T21:00:26,105 !! 2022-06-28T21:00:26,105 check.warn(importable) 2022-06-28T21:00:26,106 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,106 ############################ 2022-06-28T21:00:26,107 # Package would be ignored # 2022-06-28T21:00:26,107 ############################ 2022-06-28T21:00:26,107 Python recognizes 'pyhmmer.tests.data.hmms.db' as an importable package, however it is 2022-06-28T21:00:26,108 included in the distribution as "data". 2022-06-28T21:00:26,108 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,108 therefore is considered deprecated). 2022-06-28T21:00:26,109 Please make sure that 'pyhmmer.tests.data.hmms.db' is included as a package by using 2022-06-28T21:00:26,109 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,110 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,110 documentation page. 2022-06-28T21:00:26,111 !! 2022-06-28T21:00:26,111 check.warn(importable) 2022-06-28T21:00:26,112 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,112 ############################ 2022-06-28T21:00:26,113 # Package would be ignored # 2022-06-28T21:00:26,113 ############################ 2022-06-28T21:00:26,113 Python recognizes 'pyhmmer.tests.data.hmms.txt' as an importable package, however it is 2022-06-28T21:00:26,113 included in the distribution as "data". 2022-06-28T21:00:26,114 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,114 therefore is considered deprecated). 2022-06-28T21:00:26,115 Please make sure that 'pyhmmer.tests.data.hmms.txt' is included as a package by using 2022-06-28T21:00:26,115 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,116 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,116 documentation page. 2022-06-28T21:00:26,117 !! 2022-06-28T21:00:26,117 check.warn(importable) 2022-06-28T21:00:26,118 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,118 ############################ 2022-06-28T21:00:26,119 # Package would be ignored # 2022-06-28T21:00:26,119 ############################ 2022-06-28T21:00:26,119 Python recognizes 'pyhmmer.tests.data.hmms.txt2' as an importable package, however it is 2022-06-28T21:00:26,120 included in the distribution as "data". 2022-06-28T21:00:26,120 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,120 therefore is considered deprecated). 2022-06-28T21:00:26,121 Please make sure that 'pyhmmer.tests.data.hmms.txt2' is included as a package by using 2022-06-28T21:00:26,121 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,122 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,122 documentation page. 2022-06-28T21:00:26,123 !! 2022-06-28T21:00:26,123 check.warn(importable) 2022-06-28T21:00:26,124 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,124 ############################ 2022-06-28T21:00:26,125 # Package would be ignored # 2022-06-28T21:00:26,125 ############################ 2022-06-28T21:00:26,125 Python recognizes 'pyhmmer.tests.data.jackhmmer' as an importable package, however it is 2022-06-28T21:00:26,126 included in the distribution as "data". 2022-06-28T21:00:26,126 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,126 therefore is considered deprecated). 2022-06-28T21:00:26,127 Please make sure that 'pyhmmer.tests.data.jackhmmer' is included as a package by using 2022-06-28T21:00:26,127 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,128 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,128 documentation page. 2022-06-28T21:00:26,129 !! 2022-06-28T21:00:26,129 check.warn(importable) 2022-06-28T21:00:26,130 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:00:26,130 ############################ 2022-06-28T21:00:26,131 # Package would be ignored # 2022-06-28T21:00:26,131 ############################ 2022-06-28T21:00:26,131 Python recognizes 'pyhmmer.tests.data.msa' as an importable package, however it is 2022-06-28T21:00:26,132 included in the distribution as "data". 2022-06-28T21:00:26,132 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:00:26,132 therefore is considered deprecated). 2022-06-28T21:00:26,133 Please make sure that 'pyhmmer.tests.data.msa' is included as a package by using 2022-06-28T21:00:26,133 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:00:26,134 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:00:26,134 documentation page. 2022-06-28T21:00:26,135 !! 2022-06-28T21:00:26,135 check.warn(importable) 2022-06-28T21:00:26,137 copying pyhmmer/daemon.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,141 copying pyhmmer/daemon.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,146 copying pyhmmer/daemon.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,152 copying pyhmmer/easel.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,157 copying pyhmmer/easel.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,163 copying pyhmmer/easel.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,177 copying pyhmmer/errors.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,181 copying pyhmmer/errors.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,185 copying pyhmmer/exceptions.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,189 copying pyhmmer/plan7.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,194 copying pyhmmer/plan7.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,200 copying pyhmmer/plan7.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,223 copying pyhmmer/py.typed -> build/lib.linux-armv7l-cpython-37/pyhmmer 2022-06-28T21:00:26,226 creating build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj 2022-06-28T21:00:26,228 copying pyhmmer/fileobj/bsd.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj 2022-06-28T21:00:26,233 copying pyhmmer/fileobj/linux.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj 2022-06-28T21:00:26,238 creating build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,239 copying pyhmmer/reexports/__init__.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,243 copying pyhmmer/reexports/esl_sqio_ascii.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,247 copying pyhmmer/reexports/esl_sqio_ascii.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,251 copying pyhmmer/reexports/p7_hmmfile.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,255 copying pyhmmer/reexports/p7_hmmfile.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,259 copying pyhmmer/reexports/p7_tophits.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,263 copying pyhmmer/reexports/p7_tophits.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports 2022-06-28T21:00:26,267 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,269 copying pyhmmer/tests/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,273 copying pyhmmer/tests/requirements.txt -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,277 copying pyhmmer/tests/test_doctest.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,281 copying pyhmmer/tests/test_errors.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,285 copying pyhmmer/tests/test_hmmer.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,291 copying pyhmmer/tests/utils.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests 2022-06-28T21:00:26,295 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data 2022-06-28T21:00:26,296 copying pyhmmer/tests/data/README.md -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data 2022-06-28T21:00:26,301 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms 2022-06-28T21:00:26,302 copying pyhmmer/tests/data/hmms/make.sh -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms 2022-06-28T21:00:26,306 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin 2022-06-28T21:00:26,308 copying pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin 2022-06-28T21:00:26,315 copying pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin 2022-06-28T21:00:26,323 copying pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin 2022-06-28T21:00:26,331 copying pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin 2022-06-28T21:00:26,477 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,478 copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,484 copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,488 copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,495 copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,501 copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,507 copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,511 copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,517 copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,525 copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,531 copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,535 copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,542 copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,549 copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,606 copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,610 copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,743 copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db 2022-06-28T21:00:26,853 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,854 copying pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,869 copying pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,878 copying pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,890 copying pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,901 copying pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,914 copying pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:26,936 copying pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt 2022-06-28T21:00:27,220 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2 2022-06-28T21:00:27,222 copying pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2 2022-06-28T21:00:27,230 copying pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2 2022-06-28T21:00:27,239 copying pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2 2022-06-28T21:00:27,248 copying pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2 2022-06-28T21:00:27,487 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer 2022-06-28T21:00:27,488 copying pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer 2022-06-28T21:00:27,493 copying pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer 2022-06-28T21:00:27,498 copying pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer 2022-06-28T21:00:27,515 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa 2022-06-28T21:00:27,517 copying pyhmmer/tests/data/msa/LuxC.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa 2022-06-28T21:00:27,522 copying pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa 2022-06-28T21:00:27,528 copying pyhmmer/tests/data/msa/LuxC.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa 2022-06-28T21:00:27,533 copying pyhmmer/tests/data/msa/laccase.clw -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa 2022-06-28T21:00:27,538 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,541 copying pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,594 copying pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,607 copying pyhmmer/tests/data/seqs/CP000560.2.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,811 copying pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,821 copying pyhmmer/tests/data/seqs/LuxC.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,825 copying pyhmmer/tests/data/seqs/PKSI.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,831 copying pyhmmer/tests/data/seqs/bmyD.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs 2022-06-28T21:00:27,835 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,836 copying pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,841 copying pyhmmer/tests/data/tables/PF02826.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,845 copying pyhmmer/tests/data/tables/PF02826.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,850 copying pyhmmer/tests/data/tables/bmyD1.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,853 copying pyhmmer/tests/data/tables/bmyD2.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,857 copying pyhmmer/tests/data/tables/bmyD3.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,861 copying pyhmmer/tests/data/tables/t2pks.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,867 copying pyhmmer/tests/data/tables/t2pks.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables 2022-06-28T21:00:27,872 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,874 copying pyhmmer/tests/test_easel/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,878 copying pyhmmer/tests/test_easel/test_alphabet.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,882 copying pyhmmer/tests/test_easel/test_bitfield.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,886 copying pyhmmer/tests/test_easel/test_keyhash.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,890 copying pyhmmer/tests/test_easel/test_matrix.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,895 copying pyhmmer/tests/test_easel/test_msa.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,899 copying pyhmmer/tests/test_easel/test_msafile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,904 copying pyhmmer/tests/test_easel/test_randomness.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,907 copying pyhmmer/tests/test_easel/test_sequence.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,912 copying pyhmmer/tests/test_easel/test_sequencefile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,917 copying pyhmmer/tests/test_easel/test_ssi.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,921 copying pyhmmer/tests/test_easel/test_vector.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel 2022-06-28T21:00:27,925 creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,927 copying pyhmmer/tests/test_plan7/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,931 copying pyhmmer/tests/test_plan7/test_background.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,934 copying pyhmmer/tests/test_plan7/test_builder.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,939 copying pyhmmer/tests/test_plan7/test_hit.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,943 copying pyhmmer/tests/test_plan7/test_hmm.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,948 copying pyhmmer/tests/test_plan7/test_hmmfile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,952 copying pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,956 copying pyhmmer/tests/test_plan7/test_pipeline.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,961 copying pyhmmer/tests/test_plan7/test_profile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,965 copying pyhmmer/tests/test_plan7/test_tophits.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,969 copying pyhmmer/tests/test_plan7/test_tracealigner.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,973 copying pyhmmer/tests/test_plan7/test_traces.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7 2022-06-28T21:00:27,979 running build_clib 2022-06-28T21:00:27,998 creating build/temp.linux-armv7l-cpython-37 2022-06-28T21:00:28,000 generating "divsufsort.h" for divsufsort library 2022-06-28T21:00:28,000 copying vendor/hmmer/libdivsufsort/divsufsort.h.in -> build/temp.linux-armv7l-cpython-37/divsufsort.h 2022-06-28T21:00:28,004 generating "esl_config.h" for easel library 2022-06-28T21:00:38,998 generating "p7_config.h" for hmmer library 2022-06-28T21:00:51,205 generating build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c from vendor/easel/esl_sqio_ascii.c 2022-06-28T21:00:51,234 generating build/temp.linux-armv7l-cpython-37/p7_hmmfile.c from vendor/hmmer/src/p7_hmmfile.c 2022-06-28T21:00:51,258 generating build/temp.linux-armv7l-cpython-37/libdivsufsort.a from vendor/hmmer/libdivsufsort/divsufsort.c 2022-06-28T21:00:51,286 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o from vendor/hmmer/libdivsufsort/divsufsort.c 2022-06-28T21:00:51,286 creating build/temp.linux-armv7l-cpython-37/vendor 2022-06-28T21:00:51,287 creating build/temp.linux-armv7l-cpython-37/vendor/hmmer 2022-06-28T21:00:51,288 creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort 2022-06-28T21:00:51,291 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/libdivsufsort/divsufsort.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o 2022-06-28T21:01:00,511 arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libdivsufsort.a build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o 2022-06-28T21:01:00,571 generating build/temp.linux-armv7l-cpython-37/libeasel.a from vendor/easel/esl_distance.c, vendor/easel/esl_wuss.c, vendor/easel/esl_sq.c, vendor/easel/esl_random.c, vendor/easel/esl_stopwatch.c, vendor/easel/esl_sse.c, vendor/easel/esl_histogram.c, vendor/easel/esl_swat.c, vendor/easel/esl_msafile_selex.c, vendor/easel/esl_exponential.c, vendor/easel/esl_msaweight.c, vendor/easel/esl_gumbel.c, vendor/easel/esl_subcmd.c, vendor/easel/esl_hmm.c, vendor/easel/esl_msafile_stockholm.c, vendor/easel/esl_msafile_a2m.c, vendor/easel/esl_composition.c, vendor/easel/interface_gsl.c, vendor/easel/esl_msa.c, vendor/easel/esl_vectorops.c, vendor/easel/esl_paml.c, vendor/easel/esl_dirichlet.c, vendor/easel/esl_tree.c, vendor/easel/esl_gev.c, vendor/easel/esl_avx512.c, vendor/easel/esl_msafile.c, vendor/easel/esl_dsqdata.c, vendor/easel/esl_msafile_phylip.c, vendor/easel/interface_lapack.c, vendor/easel/esl_vmx.c, vendor/easel/esl_minimizer.c, vendor/easel/esl_cpu.c, vendor/easel/esl_huffman.c, vendor/easel/esl_gencode.c, vendor/easel/esl_regexp.c, vendor/easel/esl_msafile2.c, vendor/easel/esl_arr3.c, vendor/easel/esl_varint.c, vendor/easel/esl_rootfinder.c, vendor/easel/esl_threads.c, vendor/easel/esl_avx.c, vendor/easel/esl_sqio.c, vendor/easel/esl_quicksort.c, vendor/easel/esl_stretchexp.c, vendor/easel/esl_scorematrix.c, vendor/easel/esl_json.c, vendor/easel/esl_red_black.c, vendor/easel/esl_ratematrix.c, vendor/easel/esl_mpi.c, vendor/easel/esl_workqueue.c, vendor/easel/esl_mem.c, vendor/easel/esl_fileparser.c, vendor/easel/esl_arr2.c, vendor/easel/esl_rand64.c, vendor/easel/esl_heap.c, vendor/easel/esl_alloc.c, vendor/easel/esl_normal.c, vendor/easel/esl_mixgev.c, vendor/easel/esl_matrixops.c, vendor/easel/esl_stack.c, vendor/easel/esl_msafile_psiblast.c, vendor/easel/esl_neon.c, vendor/easel/esl_randomseq.c, vendor/easel/esl_msashuffle.c, vendor/easel/easel.c, vendor/easel/esl_mixdchlet.c, vendor/easel/esl_buffer.c, vendor/easel/esl_weibull.c, vendor/easel/esl_alphabet.c, vendor/easel/esl_sqio_ncbi.c, vendor/easel/esl_cluster.c, vendor/easel/esl_keyhash.c, vendor/easel/esl_msafile_afa.c, vendor/easel/esl_hyperexp.c, vendor/easel/esl_msacluster.c, vendor/easel/esl_bitfield.c, vendor/easel/esl_ssi.c, vendor/easel/esl_getopts.c, vendor/easel/esl_dmatrix.c, vendor/easel/esl_graph.c, vendor/easel/esl_gamma.c, vendor/easel/esl_msafile_clustal.c, vendor/easel/esl_recorder.c, vendor/easel/esl_stats.c, build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c 2022-06-28T21:01:00,579 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o from vendor/easel/esl_distance.c 2022-06-28T21:01:00,581 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o from vendor/easel/esl_subcmd.c 2022-06-28T21:01:00,581 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o from vendor/easel/esl_msa.c 2022-06-28T21:01:00,583 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o from vendor/easel/esl_histogram.c 2022-06-28T21:01:00,584 creating build/temp.linux-armv7l-cpython-37/vendor/easel 2022-06-28T21:01:00,584 creating build/temp.linux-armv7l-cpython-37/vendor/easel 2022-06-28T21:01:00,584 creating build/temp.linux-armv7l-cpython-37/vendor/easel 2022-06-28T21:01:00,585 creating build/temp.linux-armv7l-cpython-37/vendor/easel 2022-06-28T21:01:00,586 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_distance.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o 2022-06-28T21:01:00,590 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msa.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o 2022-06-28T21:01:00,591 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_subcmd.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o 2022-06-28T21:01:00,615 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_histogram.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o 2022-06-28T21:01:01,024 vendor/easel/esl_histogram.c: In function ‘esl_histogram_GetRank’: 2022-06-28T21:01:01,025 vendor/easel/esl_histogram.c:541:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:01,026 if (rank > h->n) 2022-06-28T21:01:01,026 ^ 2022-06-28T21:01:01,225 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o from vendor/easel/esl_hmm.c 2022-06-28T21:01:01,226 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_hmm.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o 2022-06-28T21:01:01,588 In file included from vendor/easel/esl_hmm.c:9: 2022-06-28T21:01:01,588 vendor/easel/esl_hmm.c: In function ‘esl_hmx_GrowTo’: 2022-06-28T21:01:01,589 vendor/easel/easel.h:416:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:01,590 #define ESL_MIN(a,b) (((a)<(b))?(a):(b)) 2022-06-28T21:01:01,590 ^ 2022-06-28T21:01:01,591 vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’ 2022-06-28T21:01:01,591 mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR); 2022-06-28T21:01:01,592 ^~~~~~~ 2022-06-28T21:01:01,592 vendor/easel/easel.h:416:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare] 2022-06-28T21:01:01,593 #define ESL_MIN(a,b) (((a)<(b))?(a):(b)) 2022-06-28T21:01:01,594 ^~~ 2022-06-28T21:01:01,594 vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’ 2022-06-28T21:01:01,595 mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR); 2022-06-28T21:01:01,595 ^~~~~~~ 2022-06-28T21:01:03,202 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o from vendor/easel/esl_wuss.c 2022-06-28T21:01:03,204 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_wuss.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o 2022-06-28T21:01:03,458 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o from vendor/easel/esl_msafile_stockholm.c 2022-06-28T21:01:03,460 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_stockholm.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o 2022-06-28T21:01:03,920 vendor/easel/esl_wuss.c: In function ‘esl_wuss2ct’: 2022-06-28T21:01:03,921 vendor/easel/esl_wuss.c:136:10: warning: ‘status’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:03,922 return status; 2022-06-28T21:01:03,922 ^~~~~~ 2022-06-28T21:01:04,082 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o from vendor/easel/esl_swat.c 2022-06-28T21:01:04,084 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_swat.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o 2022-06-28T21:01:04,855 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o from vendor/easel/esl_msafile_selex.c 2022-06-28T21:01:04,857 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_selex.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o 2022-06-28T21:01:05,533 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o from vendor/easel/esl_sq.c 2022-06-28T21:01:05,534 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_sq.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o 2022-06-28T21:01:05,987 vendor/easel/esl_sq.c: In function ‘esl_sq_Checksum’: 2022-06-28T21:01:05,988 vendor/easel/esl_sq.c:1636:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare] 2022-06-28T21:01:05,989 for (pos = 0; pos < sq->n; pos++) 2022-06-28T21:01:05,989 ^ 2022-06-28T21:01:05,991 vendor/easel/esl_sq.c:1645:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare] 2022-06-28T21:01:05,991 for (pos = 1; pos <= sq->n; pos++) 2022-06-28T21:01:05,992 ^~ 2022-06-28T21:01:06,600 vendor/easel/esl_msafile_selex.c: In function ‘esl_msafile_selex_Read’: 2022-06-28T21:01:06,600 vendor/easel/esl_msafile_selex.c:722:71: warning: ‘p’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:06,601 for (alen = msa->alen+nleft+ntext; alen < msa->alen+nadd; alen++) p[alen] = '.'; 2022-06-28T21:01:06,602 ^ 2022-06-28T21:01:06,602 vendor/easel/esl_msafile_selex.c:645:13: note: ‘p’ was declared here 2022-06-28T21:01:06,603 char *p; 2022-06-28T21:01:06,603 ^ 2022-06-28T21:01:09,200 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o from vendor/easel/esl_exponential.c 2022-06-28T21:01:09,201 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_exponential.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o 2022-06-28T21:01:10,230 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o from vendor/easel/esl_msaweight.c 2022-06-28T21:01:10,232 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msaweight.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o 2022-06-28T21:01:10,278 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o from vendor/easel/esl_msafile_a2m.c 2022-06-28T21:01:10,280 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_a2m.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o 2022-06-28T21:01:11,002 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o from vendor/easel/esl_vectorops.c 2022-06-28T21:01:11,004 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_vectorops.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o 2022-06-28T21:01:11,454 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o from vendor/easel/esl_random.c 2022-06-28T21:01:11,455 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_random.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o 2022-06-28T21:01:11,846 vendor/easel/esl_random.c: In function ‘gamma_integer’: 2022-06-28T21:01:11,847 vendor/easel/esl_random.c:652:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2022-06-28T21:01:11,847 for (i = 0; i < a; i++) 2022-06-28T21:01:11,848 ^ 2022-06-28T21:01:13,403 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o from vendor/easel/esl_stopwatch.c 2022-06-28T21:01:13,405 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_stopwatch.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o 2022-06-28T21:01:13,537 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o from vendor/easel/esl_composition.c 2022-06-28T21:01:13,539 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_composition.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o 2022-06-28T21:01:13,823 vendor/easel/esl_stopwatch.c:15:15: warning: ‘stopwatch_getRealTime’ declared ‘static’ but never defined [-Wunused-function] 2022-06-28T21:01:13,823 static double stopwatch_getRealTime(void); 2022-06-28T21:01:13,824 ^~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:13,999 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o from vendor/easel/esl_gumbel.c 2022-06-28T21:01:14,001 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_gumbel.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o 2022-06-28T21:01:14,123 generating build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o from vendor/easel/interface_gsl.c 2022-06-28T21:01:14,124 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/interface_gsl.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o 2022-06-28T21:01:14,251 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o from vendor/easel/esl_sse.c 2022-06-28T21:01:14,252 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_sse.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o 2022-06-28T21:01:14,317 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o from vendor/easel/esl_avx512.c 2022-06-28T21:01:14,319 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_avx512.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o 2022-06-28T21:01:14,486 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o from vendor/easel/esl_minimizer.c 2022-06-28T21:01:14,488 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_minimizer.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o 2022-06-28T21:01:14,610 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o from vendor/easel/esl_msafile.c 2022-06-28T21:01:14,612 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o 2022-06-28T21:01:15,298 vendor/easel/esl_minimizer.c: In function ‘esl_min_ConjugateGradientDescent’: 2022-06-28T21:01:15,298 vendor/easel/esl_minimizer.c:243:23: warning: ‘fx’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:15,299 if (opt_fx) *opt_fx = fx; 2022-06-28T21:01:15,299 ~~~~~~~~^~~~ 2022-06-28T21:01:15,300 vendor/easel/esl_minimizer.c:711:18: warning: ‘cx’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:15,300 x=v=w= a + c*(b-a); /* initial guess of x by golden section */ 2022-06-28T21:01:15,301 ~~^~~ 2022-06-28T21:01:15,301 vendor/easel/esl_minimizer.c:118:16: note: ‘cx’ was declared here 2022-06-28T21:01:15,301 double ax,bx,cx; 2022-06-28T21:01:15,302 ^~ 2022-06-28T21:01:15,302 vendor/easel/esl_minimizer.c:711:8: warning: ‘ax’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:15,303 x=v=w= a + c*(b-a); /* initial guess of x by golden section */ 2022-06-28T21:01:15,303 ~^~~~~~~~~~~~~ 2022-06-28T21:01:15,304 vendor/easel/esl_minimizer.c:118:10: note: ‘ax’ was declared here 2022-06-28T21:01:15,304 double ax,bx,cx; 2022-06-28T21:01:15,304 ^~ 2022-06-28T21:01:15,954 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o from vendor/easel/esl_arr3.c 2022-06-28T21:01:15,955 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_arr3.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o 2022-06-28T21:01:16,145 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o from vendor/easel/esl_paml.c 2022-06-28T21:01:16,147 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_paml.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o 2022-06-28T21:01:16,502 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o from vendor/easel/esl_cpu.c 2022-06-28T21:01:16,503 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_cpu.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o 2022-06-28T21:01:16,549 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o from vendor/easel/esl_varint.c 2022-06-28T21:01:16,550 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_varint.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o 2022-06-28T21:01:16,829 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o from vendor/easel/esl_dirichlet.c 2022-06-28T21:01:16,831 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_dirichlet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o 2022-06-28T21:01:16,973 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o from vendor/easel/esl_huffman.c 2022-06-28T21:01:16,974 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_huffman.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o 2022-06-28T21:01:17,335 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o from vendor/easel/esl_dsqdata.c 2022-06-28T21:01:17,337 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_dsqdata.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o 2022-06-28T21:01:17,553 vendor/easel/esl_varint.c: In function ‘esl_varint_google_decode’: 2022-06-28T21:01:17,554 vendor/easel/esl_varint.c:474:11: warning: ‘grp’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:17,554 if (grp & cmask) { status = eslEOD; goto ERROR; } 2022-06-28T21:01:17,555 ~~~~^~~~~~~ 2022-06-28T21:01:17,635 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o from vendor/easel/esl_tree.c 2022-06-28T21:01:17,637 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_tree.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o 2022-06-28T21:01:17,776 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o from vendor/easel/esl_rootfinder.c 2022-06-28T21:01:17,778 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_rootfinder.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o 2022-06-28T21:01:17,802 vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Open’: 2022-06-28T21:01:17,803 vendor/easel/esl_dsqdata.c:253:21: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:17,804 if (alphatype != dd->abc_r->type) 2022-06-28T21:01:17,805 ^~ 2022-06-28T21:01:17,833 vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Write’: 2022-06-28T21:01:17,834 vendor/easel/esl_dsqdata.c:614:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:17,834 if (sq->n > max_seqlen) max_seqlen = sq->n; 2022-06-28T21:01:17,835 ^ 2022-06-28T21:01:17,836 vendor/easel/esl_dsqdata.c:615:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:17,837 n = strlen(sq->name); if (n > max_namelen) max_namelen = n; 2022-06-28T21:01:17,838 ^ 2022-06-28T21:01:17,840 vendor/easel/esl_dsqdata.c:616:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:17,840 n = strlen(sq->acc); if (n > max_acclen) max_acclen = n; 2022-06-28T21:01:17,841 ^ 2022-06-28T21:01:17,842 vendor/easel/esl_dsqdata.c:617:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:17,843 n = strlen(sq->desc); if (n > max_desclen) max_desclen = n; 2022-06-28T21:01:17,843 ^ 2022-06-28T21:01:17,851 vendor/easel/esl_dsqdata.c:676:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:17,851 if ( fwrite(psq, sizeof(uint32_t), plen, sfp) != plen) 2022-06-28T21:01:17,852 ^~ 2022-06-28T21:01:17,853 vendor/easel/esl_dsqdata.c:682:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:17,854 if ( fwrite(sq->name, sizeof(char), n+1, mfp) != n+1) 2022-06-28T21:01:17,854 ^~ 2022-06-28T21:01:17,856 vendor/easel/esl_dsqdata.c:687:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:17,856 if ( fwrite(sq->acc, sizeof(char), n+1, mfp) != n+1) 2022-06-28T21:01:17,857 ^~ 2022-06-28T21:01:17,858 vendor/easel/esl_dsqdata.c:692:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:17,859 if ( fwrite(sq->desc, sizeof(char), n+1, mfp) != n+1) 2022-06-28T21:01:17,860 ^~ 2022-06-28T21:01:17,939 vendor/easel/esl_dsqdata.c: In function ‘dsqdata_unpacker_thread’: 2022-06-28T21:01:17,941 vendor/easel/esl_dsqdata.c:1129:1: warning: control reaches end of non-void function [-Wreturn-type] 2022-06-28T21:01:17,942 } 2022-06-28T21:01:17,942 ^ 2022-06-28T21:01:17,959 vendor/easel/esl_dsqdata.c: In function ‘dsqdata_loader_thread’: 2022-06-28T21:01:17,961 vendor/easel/esl_dsqdata.c:1052:1: warning: control reaches end of non-void function [-Wreturn-type] 2022-06-28T21:01:17,961 } 2022-06-28T21:01:17,962 ^ 2022-06-28T21:01:18,645 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o from vendor/easel/esl_threads.c 2022-06-28T21:01:18,647 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_threads.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o 2022-06-28T21:01:18,795 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o from vendor/easel/esl_gencode.c 2022-06-28T21:01:18,797 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_gencode.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o 2022-06-28T21:01:18,836 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o from vendor/easel/esl_avx.c 2022-06-28T21:01:18,837 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_avx.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o 2022-06-28T21:01:19,114 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o from vendor/easel/esl_sqio.c 2022-06-28T21:01:19,115 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_sqio.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o 2022-06-28T21:01:21,407 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o from vendor/easel/esl_quicksort.c 2022-06-28T21:01:21,408 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_quicksort.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o 2022-06-28T21:01:21,548 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o from vendor/easel/esl_regexp.c 2022-06-28T21:01:21,550 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_regexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o 2022-06-28T21:01:22,037 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o from vendor/easel/esl_msafile_phylip.c 2022-06-28T21:01:22,039 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_phylip.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o 2022-06-28T21:01:22,097 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o from vendor/easel/esl_stretchexp.c 2022-06-28T21:01:22,098 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_stretchexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o 2022-06-28T21:01:23,360 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o from vendor/easel/esl_scorematrix.c 2022-06-28T21:01:23,360 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_scorematrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o 2022-06-28T21:01:23,421 vendor/easel/esl_regexp.c: In function ‘regbranch’: 2022-06-28T21:01:23,421 vendor/easel/esl_regexp.c:793:6: warning: ‘flags’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-06-28T21:01:23,422 int flags; 2022-06-28T21:01:23,422 ^~~~~ 2022-06-28T21:01:24,242 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o from vendor/easel/esl_gev.c 2022-06-28T21:01:24,243 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_gev.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o 2022-06-28T21:01:25,622 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o from vendor/easel/esl_mpi.c 2022-06-28T21:01:25,624 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_mpi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o 2022-06-28T21:01:25,854 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o from vendor/easel/esl_msafile2.c 2022-06-28T21:01:25,855 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile2.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o 2022-06-28T21:01:26,080 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o from vendor/easel/esl_workqueue.c 2022-06-28T21:01:26,082 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_workqueue.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o 2022-06-28T21:01:26,109 generating build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o from vendor/easel/interface_lapack.c 2022-06-28T21:01:26,112 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/interface_lapack.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o 2022-06-28T21:01:26,300 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o from vendor/easel/esl_mem.c 2022-06-28T21:01:26,301 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o from vendor/easel/esl_vmx.c 2022-06-28T21:01:26,302 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_mem.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o 2022-06-28T21:01:26,303 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_vmx.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o 2022-06-28T21:01:26,314 In file included from vendor/easel/esl_msafile2.c:26: 2022-06-28T21:01:26,314 vendor/easel/esl_msafile2.c: In function ‘esl_msafile2_ReadInfoPfam’: 2022-06-28T21:01:26,315 vendor/easel/easel.h:417:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:26,316 #define ESL_MAX(a,b) (((a)>(b))?(a):(b)) 2022-06-28T21:01:26,316 ^ 2022-06-28T21:01:26,317 vendor/easel/esl_msafile2.c:630:43: note: in expansion of macro ‘ESL_MAX’ 2022-06-28T21:01:26,317 for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i])); 2022-06-28T21:01:26,317 ^~~~~~~ 2022-06-28T21:01:26,318 vendor/easel/easel.h:417:42: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare] 2022-06-28T21:01:26,318 #define ESL_MAX(a,b) (((a)>(b))?(a):(b)) 2022-06-28T21:01:26,319 ^~~ 2022-06-28T21:01:26,319 vendor/easel/esl_msafile2.c:630:43: note: in expansion of macro ‘ESL_MAX’ 2022-06-28T21:01:26,320 for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i])); 2022-06-28T21:01:26,320 ^~~~~~~ 2022-06-28T21:01:26,320 vendor/easel/easel.h:417:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:26,321 #define ESL_MAX(a,b) (((a)>(b))?(a):(b)) 2022-06-28T21:01:26,321 ^ 2022-06-28T21:01:26,321 vendor/easel/esl_msafile2.c:639:43: note: in expansion of macro ‘ESL_MAX’ 2022-06-28T21:01:26,322 for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i])); 2022-06-28T21:01:26,322 ^~~~~~~ 2022-06-28T21:01:26,323 vendor/easel/easel.h:417:42: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare] 2022-06-28T21:01:26,323 #define ESL_MAX(a,b) (((a)>(b))?(a):(b)) 2022-06-28T21:01:26,324 ^~~ 2022-06-28T21:01:26,324 vendor/easel/esl_msafile2.c:639:43: note: in expansion of macro ‘ESL_MAX’ 2022-06-28T21:01:26,325 for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i])); 2022-06-28T21:01:26,325 ^~~~~~~ 2022-06-28T21:01:26,553 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o from vendor/easel/esl_heap.c 2022-06-28T21:01:26,554 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_heap.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o 2022-06-28T21:01:27,396 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o from vendor/easel/esl_alloc.c 2022-06-28T21:01:27,398 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_alloc.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o 2022-06-28T21:01:27,611 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o from vendor/easel/esl_json.c 2022-06-28T21:01:27,613 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_json.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o 2022-06-28T21:01:27,905 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o from vendor/easel/esl_normal.c 2022-06-28T21:01:27,907 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_normal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o 2022-06-28T21:01:28,457 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o from vendor/easel/esl_mixgev.c 2022-06-28T21:01:28,459 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_mixgev.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o 2022-06-28T21:01:28,986 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o from vendor/easel/esl_fileparser.c 2022-06-28T21:01:28,988 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_fileparser.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o 2022-06-28T21:01:30,144 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o from vendor/easel/esl_arr2.c 2022-06-28T21:01:30,146 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_arr2.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o 2022-06-28T21:01:30,339 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o from vendor/easel/esl_matrixops.c 2022-06-28T21:01:30,340 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_matrixops.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o 2022-06-28T21:01:30,696 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o from vendor/easel/esl_rand64.c 2022-06-28T21:01:30,698 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_rand64.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o 2022-06-28T21:01:32,079 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o from vendor/easel/esl_msafile_psiblast.c 2022-06-28T21:01:32,082 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_psiblast.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o 2022-06-28T21:01:32,108 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o from vendor/easel/esl_red_black.c 2022-06-28T21:01:32,110 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_red_black.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o 2022-06-28T21:01:32,122 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o from vendor/easel/esl_stack.c 2022-06-28T21:01:32,126 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_stack.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o 2022-06-28T21:01:32,166 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o from vendor/easel/esl_buffer.c 2022-06-28T21:01:32,168 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_buffer.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o 2022-06-28T21:01:33,053 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o from vendor/easel/esl_ratematrix.c 2022-06-28T21:01:33,054 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_ratematrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o 2022-06-28T21:01:33,364 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o from vendor/easel/esl_msafile_afa.c 2022-06-28T21:01:33,365 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_afa.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o 2022-06-28T21:01:34,217 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o from vendor/easel/esl_neon.c 2022-06-28T21:01:34,218 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_neon.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o 2022-06-28T21:01:34,434 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o from vendor/easel/esl_randomseq.c 2022-06-28T21:01:34,435 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_randomseq.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o 2022-06-28T21:01:34,723 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o from vendor/easel/esl_dmatrix.c 2022-06-28T21:01:34,725 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_dmatrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o 2022-06-28T21:01:34,754 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o from vendor/easel/esl_hyperexp.c 2022-06-28T21:01:34,756 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_hyperexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o 2022-06-28T21:01:35,591 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o from vendor/easel/esl_weibull.c 2022-06-28T21:01:35,593 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_weibull.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o 2022-06-28T21:01:36,770 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o from vendor/easel/esl_alphabet.c 2022-06-28T21:01:36,772 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_alphabet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o 2022-06-28T21:01:37,110 vendor/easel/esl_alphabet.c: In function ‘esl_alphabet_CreateCustom’: 2022-06-28T21:01:37,112 vendor/easel/esl_alphabet.c:107:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:37,113 if (strlen(alphabet) != Kp) ESL_XEXCEPTION(eslEINVAL, "alphabet length != Kp"); 2022-06-28T21:01:37,113 ^~ 2022-06-28T21:01:37,764 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o from vendor/easel/esl_msacluster.c 2022-06-28T21:01:37,764 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msacluster.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o 2022-06-28T21:01:38,407 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o from vendor/easel/esl_graph.c 2022-06-28T21:01:38,409 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_graph.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o 2022-06-28T21:01:38,550 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o from vendor/easel/esl_bitfield.c 2022-06-28T21:01:38,550 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_bitfield.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o 2022-06-28T21:01:38,790 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o from vendor/easel/esl_msashuffle.c 2022-06-28T21:01:38,790 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msashuffle.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o 2022-06-28T21:01:39,180 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o from vendor/easel/esl_ssi.c 2022-06-28T21:01:39,180 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_ssi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o 2022-06-28T21:01:39,193 vendor/easel/esl_msashuffle.c: In function ‘esl_msashuffle_CQRNA’: 2022-06-28T21:01:39,194 vendor/easel/esl_msashuffle.c:449:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:39,195 if (strlen(y) != L) ESL_XEXCEPTION(eslEINVAL, "sequences of different lengths in qrna shuffle"); 2022-06-28T21:01:39,195 ^~ 2022-06-28T21:01:39,316 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o from vendor/easel/esl_gamma.c 2022-06-28T21:01:39,318 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_gamma.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o 2022-06-28T21:01:39,545 vendor/easel/esl_ssi.c: In function ‘esl_ssi_FindNumber’: 2022-06-28T21:01:39,546 vendor/easel/esl_ssi.c:261:12: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,547 if (nkey >= ssi->nprimary) { status = eslENOTFOUND; goto ERROR; } 2022-06-28T21:01:39,547 ^~ 2022-06-28T21:01:39,570 vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddFile’: 2022-06-28T21:01:39,571 vendor/easel/esl_ssi.c:728:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,571 if ((n+1) > ns->flen) ns->flen = n+1; 2022-06-28T21:01:39,572 ^ 2022-06-28T21:01:39,579 vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddKey’: 2022-06-28T21:01:39,580 vendor/easel/esl_ssi.c:862:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,580 if (n > ns->plen) ns->plen = n; 2022-06-28T21:01:39,581 ^ 2022-06-28T21:01:39,583 vendor/easel/esl_ssi.c:893:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,584 for (i = ns->nprimary; i < ns->nprimary + eslSSI_KCHUNK; i++) 2022-06-28T21:01:39,585 ^ 2022-06-28T21:01:39,585 vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddAlias’: 2022-06-28T21:01:39,586 vendor/easel/esl_ssi.c:941:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,587 if (n > ns->slen) ns->slen = n; 2022-06-28T21:01:39,588 ^ 2022-06-28T21:01:39,590 vendor/easel/esl_ssi.c:957:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,590 for (i = ns->nsecondary; i < ns->nsecondary+eslSSI_KCHUNK; i++) { 2022-06-28T21:01:39,591 ^ 2022-06-28T21:01:39,602 vendor/easel/esl_ssi.c: In function ‘esl_newssi_Write’: 2022-06-28T21:01:39,603 vendor/easel/esl_ssi.c:1149:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,604 for (i = 0; i < ns->nprimary; i++) 2022-06-28T21:01:39,605 ^ 2022-06-28T21:01:39,605 vendor/easel/esl_ssi.c:1167:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,606 for (i = 0; i < ns->nprimary; i++) 2022-06-28T21:01:39,606 ^ 2022-06-28T21:01:39,608 vendor/easel/esl_ssi.c:1187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,609 for (i = 0; i < ns->nsecondary; i++) 2022-06-28T21:01:39,610 ^ 2022-06-28T21:01:39,611 vendor/easel/esl_ssi.c:1204:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,613 for (i = 0; i < ns->nsecondary; i++) 2022-06-28T21:01:39,613 ^ 2022-06-28T21:01:39,619 vendor/easel/esl_ssi.c: In function ‘esl_newssi_Close’: 2022-06-28T21:01:39,620 vendor/easel/esl_ssi.c:1253:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,620 for (i = 0; i < ns->nprimary; i++) 2022-06-28T21:01:39,621 ^ 2022-06-28T21:01:39,622 vendor/easel/esl_ssi.c:1259:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,622 for (i = 0; i < ns->nsecondary; i++) 2022-06-28T21:01:39,622 ^ 2022-06-28T21:01:39,633 vendor/easel/esl_ssi.c: In function ‘activate_external_sort’: 2022-06-28T21:01:39,633 vendor/easel/esl_ssi.c:1351:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,634 for (i = 0; i < ns->nprimary; i++) { 2022-06-28T21:01:39,634 ^ 2022-06-28T21:01:39,635 vendor/easel/esl_ssi.c:1370:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,636 for (i = 0; i < ns->nsecondary; i++) 2022-06-28T21:01:39,636 ^ 2022-06-28T21:01:39,637 vendor/easel/esl_ssi.c:1376:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,637 for (i = 0; i < ns->nprimary; i++) free(ns->pkeys[i].key); 2022-06-28T21:01:39,638 ^ 2022-06-28T21:01:39,638 vendor/easel/esl_ssi.c:1377:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,639 for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].key); 2022-06-28T21:01:39,640 ^ 2022-06-28T21:01:39,640 vendor/easel/esl_ssi.c:1378:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:39,641 for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].pkey); 2022-06-28T21:01:39,641 ^ 2022-06-28T21:01:40,553 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o from vendor/easel/esl_sqio_ncbi.c 2022-06-28T21:01:40,555 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_sqio_ncbi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o 2022-06-28T21:01:40,788 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o from vendor/easel/esl_msafile_clustal.c 2022-06-28T21:01:40,789 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_msafile_clustal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o 2022-06-28T21:01:40,952 vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ParseIndexFile’: 2022-06-28T21:01:40,953 vendor/easel/esl_sqio_ncbi.c:216:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:40,954 if (htobe32(info[1]) != dbtype) status = eslEUNIMPLEMENTED; 2022-06-28T21:01:40,954 ^~ 2022-06-28T21:01:40,955 generating build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o from vendor/easel/easel.c 2022-06-28T21:01:40,956 vendor/easel/esl_sqio_ncbi.c:226:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:40,956 if (fread(ncbi->title, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; } 2022-06-28T21:01:40,959 ^~ 2022-06-28T21:01:40,960 vendor/easel/esl_sqio_ncbi.c:233:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:40,961 if (fread(ncbi->timestamp, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; } 2022-06-28T21:01:40,961 ^~ 2022-06-28T21:01:40,962 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/easel.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o 2022-06-28T21:01:40,978 vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_Read’: 2022-06-28T21:01:40,979 vendor/easel/esl_sqio_ncbi.c:758:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:40,980 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:40,980 ^~ 2022-06-28T21:01:40,982 vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadInfo’: 2022-06-28T21:01:40,983 vendor/easel/esl_sqio_ncbi.c:809:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:40,983 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:40,984 ^~ 2022-06-28T21:01:40,985 vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadSequence’: 2022-06-28T21:01:40,985 vendor/easel/esl_sqio_ncbi.c:860:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:40,986 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:40,987 ^~ 2022-06-28T21:01:40,990 vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadWindow’: 2022-06-28T21:01:40,991 vendor/easel/esl_sqio_ncbi.c:1036:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:40,992 if (status != eslOK || nres != W) { 2022-06-28T21:01:40,992 ^~ 2022-06-28T21:01:40,993 vendor/easel/esl_sqio_ncbi.c:1059:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:40,994 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:40,994 ^~ 2022-06-28T21:01:41,014 vendor/easel/esl_sqio_ncbi.c: In function ‘volume_open’: 2022-06-28T21:01:41,015 vendor/easel/esl_sqio_ncbi.c:1421:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,016 if (volume < 0 || volume > ncbi->volumes) return eslEINVAL; 2022-06-28T21:01:41,016 ^ 2022-06-28T21:01:41,022 vendor/easel/esl_sqio_ncbi.c:1458:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,023 if (htobe32(info[1]) != dbtype) status = eslEFORMAT; 2022-06-28T21:01:41,023 ^~ 2022-06-28T21:01:41,024 vendor/easel/esl_sqio_ncbi.c: In function ‘pos_sequence’: 2022-06-28T21:01:41,025 vendor/easel/esl_sqio_ncbi.c:1513:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,025 if (inx < 0 || inx > ncbi->num_seq) return eslEINVAL; 2022-06-28T21:01:41,026 ^ 2022-06-28T21:01:41,026 vendor/easel/esl_sqio_ncbi.c:1519:25: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,027 if (ncbi->index_start == -1 || inx < start || inx > end) { 2022-06-28T21:01:41,027 ^~ 2022-06-28T21:01:41,028 vendor/easel/esl_sqio_ncbi.c:1519:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,028 if (ncbi->index_start == -1 || inx < start || inx > end) { 2022-06-28T21:01:41,029 ^ 2022-06-28T21:01:41,030 vendor/easel/esl_sqio_ncbi.c:1519:53: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,030 if (ncbi->index_start == -1 || inx < start || inx > end) { 2022-06-28T21:01:41,031 ^ 2022-06-28T21:01:41,031 vendor/easel/esl_sqio_ncbi.c:1524:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,032 if (inx < volume->start_seq || inx > volume->end_seq) { 2022-06-28T21:01:41,032 ^ 2022-06-28T21:01:41,033 vendor/easel/esl_sqio_ncbi.c:1524:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,033 if (inx < volume->start_seq || inx > volume->end_seq) { 2022-06-28T21:01:41,034 ^ 2022-06-28T21:01:41,037 vendor/easel/esl_sqio_ncbi.c:1526:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,037 for (cnt = 0; cnt < ncbi->volumes; ++cnt) { 2022-06-28T21:01:41,040 ^ 2022-06-28T21:01:41,040 vendor/easel/esl_sqio_ncbi.c:1527:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,043 if (inx < volume->end_seq) break; 2022-06-28T21:01:41,044 ^ 2022-06-28T21:01:41,048 vendor/easel/esl_sqio_ncbi.c:1532:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,048 if (cnt >= ncbi->volumes) return eslFAIL; 2022-06-28T21:01:41,049 ^~ 2022-06-28T21:01:41,058 vendor/easel/esl_sqio_ncbi.c:1539:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,058 if (ncbi->index_start == -1 || inx > end) { 2022-06-28T21:01:41,059 ^~ 2022-06-28T21:01:41,059 vendor/easel/esl_sqio_ncbi.c:1539:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,060 if (ncbi->index_start == -1 || inx > end) { 2022-06-28T21:01:41,060 ^ 2022-06-28T21:01:41,061 vendor/easel/esl_sqio_ncbi.c:1564:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,061 if (fread(ncbi->hdr_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) { 2022-06-28T21:01:41,061 ^~ 2022-06-28T21:01:41,062 vendor/easel/esl_sqio_ncbi.c:1572:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,062 if (fread(ncbi->seq_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) { 2022-06-28T21:01:41,063 ^~ 2022-06-28T21:01:41,063 vendor/easel/esl_sqio_ncbi.c:1581:72: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,064 if (fread(ncbi->amb_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) { 2022-06-28T21:01:41,064 ^~ 2022-06-28T21:01:41,064 vendor/easel/esl_sqio_ncbi.c: In function ‘read_amino’: 2022-06-28T21:01:41,065 vendor/easel/esl_sqio_ncbi.c:1623:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,065 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:41,066 ^~ 2022-06-28T21:01:41,066 vendor/easel/esl_sqio_ncbi.c:1633:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,066 if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT; 2022-06-28T21:01:41,067 ^~ 2022-06-28T21:01:41,080 vendor/easel/esl_sqio_ncbi.c:1641:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,080 if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT; 2022-06-28T21:01:41,081 ^~ 2022-06-28T21:01:41,082 vendor/easel/esl_sqio_ncbi.c: In function ‘read_dna’: 2022-06-28T21:01:41,082 vendor/easel/esl_sqio_ncbi.c:1690:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,083 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:41,083 ^~ 2022-06-28T21:01:41,083 vendor/easel/esl_sqio_ncbi.c:1701:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,084 if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT; 2022-06-28T21:01:41,085 ^~ 2022-06-28T21:01:41,085 vendor/easel/esl_sqio_ncbi.c:1754:33: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,086 if (ncbi->seq_apos - sq->doff < size) { 2022-06-28T21:01:41,086 ^ 2022-06-28T21:01:41,087 vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_amino’: 2022-06-28T21:01:41,087 vendor/easel/esl_sqio_ncbi.c:1831:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,088 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:41,088 ^~ 2022-06-28T21:01:41,088 vendor/easel/esl_sqio_ncbi.c:1856:51: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,089 if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT; 2022-06-28T21:01:41,099 ^~ 2022-06-28T21:01:41,100 vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_dna’: 2022-06-28T21:01:41,101 vendor/easel/esl_sqio_ncbi.c:2005:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,101 if (ncbi->index >= ncbi->num_seq) return eslEOF; 2022-06-28T21:01:41,102 ^~ 2022-06-28T21:01:41,102 vendor/easel/esl_sqio_ncbi.c:2047:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,103 if (fread(ncbi->hdr_buf, sizeof(char), ssize, ncbi->fppsq) != ssize) return eslEFORMAT; 2022-06-28T21:01:41,103 ^~ 2022-06-28T21:01:41,104 vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_dna’: 2022-06-28T21:01:41,105 vendor/easel/esl_sqio_ncbi.c:2178:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,106 for (x = 0; x < strlen(ncbisym); ++x) { 2022-06-28T21:01:41,107 ^ 2022-06-28T21:01:41,108 vendor/easel/esl_sqio_ncbi.c:2179:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,109 for (y = 0; y < strlen(abc->sym); ++y) { 2022-06-28T21:01:41,109 ^ 2022-06-28T21:01:41,110 vendor/easel/esl_sqio_ncbi.c:2187:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,110 if (y >= strlen(abc->sym)) return eslEFORMAT; 2022-06-28T21:01:41,110 ^~ 2022-06-28T21:01:41,111 vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_amino’: 2022-06-28T21:01:41,111 vendor/easel/esl_sqio_ncbi.c:2226:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,113 for (x = 0; x < strlen(ncbisym); ++x) { 2022-06-28T21:01:41,113 ^ 2022-06-28T21:01:41,114 vendor/easel/esl_sqio_ncbi.c:2227:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,114 for (y = 0; y < strlen(abc->sym); ++y) { 2022-06-28T21:01:41,115 ^ 2022-06-28T21:01:41,115 vendor/easel/esl_sqio_ncbi.c:2235:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:41,116 if (y >= strlen(abc->sym)) return eslEFORMAT; 2022-06-28T21:01:41,116 ^~ 2022-06-28T21:01:41,133 vendor/easel/esl_sqio_ncbi.c: In function ‘parse_header’: 2022-06-28T21:01:41,134 vendor/easel/esl_sqio_ncbi.c:2463:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:41,135 if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fpphr) != size) return eslEFORMAT; 2022-06-28T21:01:41,135 ^~ 2022-06-28T21:01:41,472 vendor/easel/easel.c: In function ‘esl_FileNewSuffix’: 2022-06-28T21:01:41,473 vendor/easel/easel.c:1807:46: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare] 2022-06-28T21:01:41,473 nf = (lastdot == NULL)? strlen(filename) : lastdot-filename; 2022-06-28T21:01:41,474 ^~~~~~~~~~~~~~~~ 2022-06-28T21:01:43,694 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o from vendor/easel/esl_getopts.c 2022-06-28T21:01:43,696 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_getopts.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o 2022-06-28T21:01:43,787 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o from vendor/easel/esl_recorder.c 2022-06-28T21:01:43,789 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_recorder.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o 2022-06-28T21:01:44,183 vendor/easel/esl_getopts.c: In function ‘get_optidx_abbrev’: 2022-06-28T21:01:44,184 vendor/easel/esl_getopts.c:1308:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:44,185 if (n == strlen(g->opt[i].name)) { nexact++; break; } /* an exact match; can stop now (xref bug #e4) */ 2022-06-28T21:01:44,185 ^~ 2022-06-28T21:01:44,403 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o from vendor/easel/esl_mixdchlet.c 2022-06-28T21:01:44,409 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_mixdchlet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o 2022-06-28T21:01:45,137 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o from vendor/easel/esl_stats.c 2022-06-28T21:01:45,139 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_stats.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o 2022-06-28T21:01:46,595 generating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o from build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c 2022-06-28T21:01:46,596 creating build/temp.linux-armv7l-cpython-37/build 2022-06-28T21:01:46,597 creating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37 2022-06-28T21:01:46,600 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c -o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o 2022-06-28T21:01:47,186 build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c: In function ‘sqascii_Echo’: 2022-06-28T21:01:47,187 build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1669:60: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:47,188 if (fwrite(ascii->buf, sizeof(char), ascii->nc, ofp) != ascii->nc) ESL_EXCEPTION(eslESYS, "fwrite() failed"); 2022-06-28T21:01:47,188 ^~ 2022-06-28T21:01:47,633 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o from vendor/easel/esl_cluster.c 2022-06-28T21:01:47,635 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_cluster.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o 2022-06-28T21:01:47,923 vendor/easel/esl_cluster.c: In function ‘esl_cluster_SingleLinkage’: 2022-06-28T21:01:47,924 vendor/easel/esl_cluster.c:151:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:47,924 for (v = 0; v < n; v++) a[v] = n-v-1; /* initialize by pushing all vertices onto available list (backwards) */ 2022-06-28T21:01:47,925 ^ 2022-06-28T21:01:48,155 generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o from vendor/easel/esl_keyhash.c 2022-06-28T21:01:48,156 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/easel/esl_keyhash.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o 2022-06-28T21:01:48,455 vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Clone’: 2022-06-28T21:01:48,455 vendor/easel/esl_keyhash.c:94:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare] 2022-06-28T21:01:48,456 for (h = 0; h < kh->hashsize; h++) 2022-06-28T21:01:48,456 ^ 2022-06-28T21:01:48,456 vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Reuse’: 2022-06-28T21:01:48,457 vendor/easel/esl_keyhash.c:171:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:48,457 for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1; 2022-06-28T21:01:48,457 ^ 2022-06-28T21:01:48,458 vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Dump’: 2022-06-28T21:01:48,458 vendor/easel/esl_keyhash.c:215:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare] 2022-06-28T21:01:48,459 for (h = 0; h < kh->hashsize; h++) 2022-06-28T21:01:48,459 ^ 2022-06-28T21:01:48,463 vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Store’: 2022-06-28T21:01:48,464 vendor/easel/esl_keyhash.c:310:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:48,464 if (kh->nkeys > 3*kh->hashsize) 2022-06-28T21:01:48,464 ^ 2022-06-28T21:01:48,467 vendor/easel/esl_keyhash.c: In function ‘keyhash_create’: 2022-06-28T21:01:48,468 vendor/easel/esl_keyhash.c:401:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:48,468 for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1; 2022-06-28T21:01:48,468 ^ 2022-06-28T21:01:48,472 vendor/easel/esl_keyhash.c: In function ‘key_upsize’: 2022-06-28T21:01:48,472 vendor/easel/esl_keyhash.c:491:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:48,473 for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1; 2022-06-28T21:01:48,473 ^ 2022-06-28T21:01:53,055 arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o 2022-06-28T21:01:53,616 generating build/temp.linux-armv7l-cpython-37/libhmmer.a from vendor/hmmer/src/build.c, vendor/hmmer/src/cachedb.c, vendor/hmmer/src/cachedb_shard.c, vendor/hmmer/src/emit.c, vendor/hmmer/src/errors.c, vendor/hmmer/src/evalues.c, vendor/hmmer/src/eweight.c, vendor/hmmer/src/generic_decoding.c, vendor/hmmer/src/generic_fwdback.c, vendor/hmmer/src/generic_fwdback_chk.c, vendor/hmmer/src/generic_fwdback_banded.c, vendor/hmmer/src/generic_null2.c, vendor/hmmer/src/generic_msv.c, vendor/hmmer/src/generic_optacc.c, vendor/hmmer/src/generic_stotrace.c, vendor/hmmer/src/generic_viterbi.c, vendor/hmmer/src/generic_vtrace.c, vendor/hmmer/src/h2_io.c, vendor/hmmer/src/heatmap.c, vendor/hmmer/src/hmmlogo.c, vendor/hmmer/src/hmmdmstr.c, vendor/hmmer/src/hmmdmstr_shard.c, vendor/hmmer/src/hmmd_search_status.c, vendor/hmmer/src/hmmdwrkr.c, vendor/hmmer/src/hmmdwrkr_shard.c, vendor/hmmer/src/hmmdutils.c, vendor/hmmer/src/hmmer.c, vendor/hmmer/src/logsum.c, vendor/hmmer/src/modelconfig.c, vendor/hmmer/src/modelstats.c, vendor/hmmer/src/mpisupport.c, vendor/hmmer/src/seqmodel.c, vendor/hmmer/src/tracealign.c, vendor/hmmer/src/p7_alidisplay.c, vendor/hmmer/src/p7_bg.c, vendor/hmmer/src/p7_builder.c, vendor/hmmer/src/p7_domain.c, vendor/hmmer/src/p7_domaindef.c, vendor/hmmer/src/p7_gbands.c, vendor/hmmer/src/p7_gmx.c, vendor/hmmer/src/p7_gmxb.c, vendor/hmmer/src/p7_gmxchk.c, vendor/hmmer/src/p7_hit.c, vendor/hmmer/src/p7_hmm.c, vendor/hmmer/src/p7_hmmcache.c, vendor/hmmer/src/p7_hmmd_search_stats.c, vendor/hmmer/src/p7_hmmwindow.c, vendor/hmmer/src/p7_pipeline.c, vendor/hmmer/src/p7_prior.c, vendor/hmmer/src/p7_profile.c, vendor/hmmer/src/p7_spensemble.c, vendor/hmmer/src/p7_tophits.c, vendor/hmmer/src/p7_trace.c, vendor/hmmer/src/p7_scoredata.c, vendor/hmmer/src/hmmpgmd2msa.c, vendor/hmmer/src/fm_alphabet.c, vendor/hmmer/src/fm_general.c, vendor/hmmer/src/fm_sse.c, vendor/hmmer/src/fm_ssv.c, build/temp.linux-armv7l-cpython-37/p7_hmmfile.c 2022-06-28T21:01:53,624 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o from vendor/hmmer/src/build.c 2022-06-28T21:01:53,625 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o from vendor/hmmer/src/errors.c 2022-06-28T21:01:53,625 creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src 2022-06-28T21:01:53,626 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o from vendor/hmmer/src/generic_fwdback.c 2022-06-28T21:01:53,627 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o from vendor/hmmer/src/generic_msv.c 2022-06-28T21:01:53,628 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/errors.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o 2022-06-28T21:01:53,629 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/build.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o 2022-06-28T21:01:53,652 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/generic_fwdback.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o 2022-06-28T21:01:53,663 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/generic_msv.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o 2022-06-28T21:01:54,055 In file included from vendor/hmmer/src/errors.c:19: 2022-06-28T21:01:54,055 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:54,056 #error "No vector implementation enabled" 2022-06-28T21:01:54,056 ^~~~~ 2022-06-28T21:01:54,057 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,058 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:54,058 ^~~~~~ 2022-06-28T21:01:54,059 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,059 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:54,060 ^~~~~~ 2022-06-28T21:01:54,061 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,061 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:54,062 ^~~~~~ 2022-06-28T21:01:54,062 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,063 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:54,064 ^~~~~~ 2022-06-28T21:01:54,065 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,066 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:54,067 ^~~~~~~~~~~ 2022-06-28T21:01:54,067 P7_PROFILE 2022-06-28T21:01:54,069 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,069 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:54,070 ^~~~~~~~~~~ 2022-06-28T21:01:54,071 P7_PROFILE 2022-06-28T21:01:54,076 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,077 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:54,078 ^~~~~~~~~~~ 2022-06-28T21:01:54,078 P7_PROFILE 2022-06-28T21:01:54,080 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,080 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:54,081 ^~~~~~~~~~~ 2022-06-28T21:01:54,081 P7_PROFILE 2022-06-28T21:01:54,092 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,093 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:54,093 ^~~~~~~~~~~ 2022-06-28T21:01:54,097 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,098 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:54,098 ^~~~~~~~~~~ 2022-06-28T21:01:54,099 P7_PROFILE 2022-06-28T21:01:54,101 In file included from vendor/hmmer/src/generic_msv.c:20: 2022-06-28T21:01:54,102 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:54,102 #error "No vector implementation enabled" 2022-06-28T21:01:54,103 ^~~~~ 2022-06-28T21:01:54,103 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,104 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:54,104 ^~~~~~~~~~~ 2022-06-28T21:01:54,105 P7_PROFILE 2022-06-28T21:01:54,105 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,106 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:54,106 ^~~~~~ 2022-06-28T21:01:54,107 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,108 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:54,108 ^~~~~~ 2022-06-28T21:01:54,109 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,110 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:54,111 ^~~~~~ 2022-06-28T21:01:54,112 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,112 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:54,113 ^~~~~~ 2022-06-28T21:01:54,114 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,115 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:54,116 ^~~~~~~~~~~ 2022-06-28T21:01:54,116 P7_PROFILE 2022-06-28T21:01:54,117 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,118 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:54,119 ^~~~~~~~~~~ 2022-06-28T21:01:54,120 P7_PROFILE 2022-06-28T21:01:54,120 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,121 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,122 ^~~~~~~~~~~ 2022-06-28T21:01:54,122 P7_PROFILE 2022-06-28T21:01:54,122 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,123 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:54,124 ^~~~~~~~~~~ 2022-06-28T21:01:54,124 P7_PROFILE 2022-06-28T21:01:54,125 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,125 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,126 ^~~~~~ 2022-06-28T21:01:54,126 P7_GMX 2022-06-28T21:01:54,127 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,127 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:54,128 ^~~~~~~~~~~ 2022-06-28T21:01:54,129 P7_PROFILE 2022-06-28T21:01:54,130 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,131 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:54,131 ^~~~~~~~~~~ 2022-06-28T21:01:54,132 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,133 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:54,133 ^~~~~~~~~~~ 2022-06-28T21:01:54,134 P7_PROFILE 2022-06-28T21:01:54,134 In file included from vendor/hmmer/src/generic_fwdback.c:15: 2022-06-28T21:01:54,135 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:54,135 #error "No vector implementation enabled" 2022-06-28T21:01:54,136 ^~~~~ 2022-06-28T21:01:54,137 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,137 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:54,138 ^~~~~~~~~~~ 2022-06-28T21:01:54,139 P7_PROFILE 2022-06-28T21:01:54,140 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,141 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:54,142 ^~~~~~ 2022-06-28T21:01:54,142 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,143 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:54,144 ^~~~~~ 2022-06-28T21:01:54,145 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,146 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:54,146 ^~~~~~ 2022-06-28T21:01:54,147 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,147 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:54,148 ^~~~~~ 2022-06-28T21:01:54,149 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,150 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,151 ^~~~~~ 2022-06-28T21:01:54,152 P7_GMX 2022-06-28T21:01:54,153 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,154 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,154 ^~~~~~~~~~~ 2022-06-28T21:01:54,155 P7_PROFILE 2022-06-28T21:01:54,155 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,156 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:54,156 ^~~~~~~~~~~ 2022-06-28T21:01:54,156 P7_PROFILE 2022-06-28T21:01:54,157 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,157 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,158 ^~~~~~ 2022-06-28T21:01:54,159 P7_GMX 2022-06-28T21:01:54,159 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,160 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,160 ^~~~~~ 2022-06-28T21:01:54,161 P7_GMX 2022-06-28T21:01:54,162 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,162 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:54,163 ^~~~~~~~~~~ 2022-06-28T21:01:54,163 P7_PROFILE 2022-06-28T21:01:54,164 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,164 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,165 ^~~~~~ 2022-06-28T21:01:54,166 P7_GMX 2022-06-28T21:01:54,167 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,167 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,168 ^~~~~~ 2022-06-28T21:01:54,168 P7_GMX 2022-06-28T21:01:54,169 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,170 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:54,170 ^~~~~~~~~~~ 2022-06-28T21:01:54,170 P7_PROFILE 2022-06-28T21:01:54,171 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,172 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,172 ^~~~~~ 2022-06-28T21:01:54,173 P7_GMX 2022-06-28T21:01:54,173 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,173 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:54,174 ^~~~~~~~~~~ 2022-06-28T21:01:54,175 P7_PROFILE 2022-06-28T21:01:54,175 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,176 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,176 ^~~~~~ 2022-06-28T21:01:54,176 P7_GMX 2022-06-28T21:01:54,177 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,177 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:54,178 ^~~~~~~~~~~ 2022-06-28T21:01:54,178 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,179 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:54,179 ^~~~~~~~~~~ 2022-06-28T21:01:54,180 P7_PROFILE 2022-06-28T21:01:54,181 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,182 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:54,182 ^~~~~~~~~~~ 2022-06-28T21:01:54,183 P7_PROFILE 2022-06-28T21:01:54,184 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,185 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:54,185 ^~~~~~~~~~~ 2022-06-28T21:01:54,186 P7_PROFILE 2022-06-28T21:01:54,187 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,187 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:54,188 ^~~~~~~~~~~ 2022-06-28T21:01:54,189 P7_PROFILE 2022-06-28T21:01:54,189 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,190 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:54,190 ^~~~~~~~~~~ 2022-06-28T21:01:54,191 P7_PROFILE 2022-06-28T21:01:54,191 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,192 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:54,192 ^~~~~~~~~~~ 2022-06-28T21:01:54,193 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,194 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:54,194 ^~~~~~~~~~~ 2022-06-28T21:01:54,195 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,196 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:54,197 ^~~~~~~~~~~ 2022-06-28T21:01:54,197 P7_PROFILE 2022-06-28T21:01:54,198 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,199 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:54,199 ^~~~~~~~~~~ 2022-06-28T21:01:54,200 P7_PROFILE 2022-06-28T21:01:54,201 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,202 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,202 ^~~~~~~~~~~ 2022-06-28T21:01:54,203 P7_PROFILE 2022-06-28T21:01:54,204 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,205 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:54,205 ^~~~~~~~~~~ 2022-06-28T21:01:54,206 P7_PROFILE 2022-06-28T21:01:54,207 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,207 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,208 ^~~~~~ 2022-06-28T21:01:54,209 P7_GMX 2022-06-28T21:01:54,209 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,210 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:54,210 ^~~~~~~~~~~ 2022-06-28T21:01:54,211 P7_PROFILE 2022-06-28T21:01:54,211 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,212 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,212 ^~~~~~ 2022-06-28T21:01:54,213 P7_GMX 2022-06-28T21:01:54,213 In file included from vendor/hmmer/src/build.c:32: 2022-06-28T21:01:54,213 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:54,214 #error "No vector implementation enabled" 2022-06-28T21:01:54,215 ^~~~~ 2022-06-28T21:01:54,216 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,216 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:54,217 ^~~~~~~~~~~ 2022-06-28T21:01:54,218 P7_PROFILE 2022-06-28T21:01:54,218 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,219 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:54,220 ^~~~~~~~~~~ 2022-06-28T21:01:54,220 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,222 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:54,223 ^~~~~~~~~~~ 2022-06-28T21:01:54,224 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,225 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:54,226 ^~~~~~ 2022-06-28T21:01:54,227 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,228 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:54,228 ^~~~~~ 2022-06-28T21:01:54,229 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,230 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:54,231 ^~~~~~ 2022-06-28T21:01:54,232 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,233 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:54,233 ^~~~~~ 2022-06-28T21:01:54,234 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,234 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:54,235 ^~~~~~~~~~~ 2022-06-28T21:01:54,236 P7_PROFILE 2022-06-28T21:01:54,237 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,237 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:54,238 ^~~~~~~~~~~ 2022-06-28T21:01:54,239 P7_PROFILE 2022-06-28T21:01:54,239 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,240 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:54,240 ^~~~~~~~~~~ 2022-06-28T21:01:54,241 P7_PROFILE 2022-06-28T21:01:54,241 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,242 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:54,243 ^~~~~~~~~~~ 2022-06-28T21:01:54,243 P7_PROFILE 2022-06-28T21:01:54,244 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,245 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,245 ^~~~~~ 2022-06-28T21:01:54,245 P7_GMX 2022-06-28T21:01:54,246 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,247 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:54,248 ^~~~~~~~~~~ 2022-06-28T21:01:54,248 P7_PROFILE 2022-06-28T21:01:54,248 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,249 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,249 ^~~~~~ 2022-06-28T21:01:54,250 P7_GMX 2022-06-28T21:01:54,250 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,251 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:54,251 ^~~~~~~~~~~ 2022-06-28T21:01:54,252 P7_PROFILE 2022-06-28T21:01:54,252 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,253 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:54,253 ^~~~~~~~~~~ 2022-06-28T21:01:54,254 P7_PROFILE 2022-06-28T21:01:54,255 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,255 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:54,256 ^~~~~~~~~~~ 2022-06-28T21:01:54,257 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,257 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:54,257 ^~~~~~~~~~~ 2022-06-28T21:01:54,258 P7_PROFILE 2022-06-28T21:01:54,258 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,259 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:54,259 ^~~~~~~~~~~ 2022-06-28T21:01:54,260 P7_PROFILE 2022-06-28T21:01:54,261 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,261 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:54,262 ^~~~~~~~~~~ 2022-06-28T21:01:54,262 P7_PROFILE 2022-06-28T21:01:54,263 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,264 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:54,264 ^~~~~~~~~~~ 2022-06-28T21:01:54,265 P7_PROFILE 2022-06-28T21:01:54,265 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,266 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:54,266 ^~~~~~~~~~~ 2022-06-28T21:01:54,267 P7_PROFILE 2022-06-28T21:01:54,267 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,267 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,268 ^~~~~~~~~~~ 2022-06-28T21:01:54,268 P7_PROFILE 2022-06-28T21:01:54,269 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,269 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,270 ^~~~~~ 2022-06-28T21:01:54,271 P7_GMX 2022-06-28T21:01:54,271 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,272 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,273 ^~~~~~ 2022-06-28T21:01:54,273 P7_GMX 2022-06-28T21:01:54,274 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,275 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,276 ^~~~~~ 2022-06-28T21:01:54,276 P7_GMX 2022-06-28T21:01:54,277 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o from vendor/hmmer/src/hmmdmstr.c 2022-06-28T21:01:54,277 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o from vendor/hmmer/src/generic_vtrace.c 2022-06-28T21:01:54,278 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,279 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:54,280 ^~~~~~~~~~~ 2022-06-28T21:01:54,280 P7_PROFILE 2022-06-28T21:01:54,281 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,282 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:54,282 ^~~~~~~~~~~ 2022-06-28T21:01:54,283 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,283 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:54,284 ^~~~~~~~~~~ 2022-06-28T21:01:54,285 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/hmmdmstr.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o 2022-06-28T21:01:54,285 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,286 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,286 ^~~~~~ 2022-06-28T21:01:54,287 P7_GMX 2022-06-28T21:01:54,287 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/generic_vtrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o 2022-06-28T21:01:54,288 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,288 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:54,289 ^~~~~~~~~~~ 2022-06-28T21:01:54,289 P7_PROFILE 2022-06-28T21:01:54,290 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,290 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:54,291 ^~~~~~~~~~~ 2022-06-28T21:01:54,291 P7_PROFILE 2022-06-28T21:01:54,292 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,293 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:54,293 ^~~~~~~~~~~ 2022-06-28T21:01:54,294 P7_PROFILE 2022-06-28T21:01:54,295 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,296 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:54,296 ^~~~~~~~~~~ 2022-06-28T21:01:54,297 P7_PROFILE 2022-06-28T21:01:54,297 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,298 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:54,298 ^~~~~~~~~~~ 2022-06-28T21:01:54,299 P7_PROFILE 2022-06-28T21:01:54,300 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,300 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:54,301 ^~~~~~~~~~~ 2022-06-28T21:01:54,302 P7_PROFILE 2022-06-28T21:01:54,302 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,303 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:54,303 ^~~~~~~~~~~ 2022-06-28T21:01:54,304 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,304 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:54,305 ^~~~~~~~~~~ 2022-06-28T21:01:54,305 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,305 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:54,306 ^~~~~~~~~~~ 2022-06-28T21:01:54,307 P7_PROFILE 2022-06-28T21:01:54,308 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,309 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:54,309 ^~~~~~~~~~~ 2022-06-28T21:01:54,310 P7_PROFILE 2022-06-28T21:01:54,311 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,312 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:54,313 ^~~~~~~~~~~ 2022-06-28T21:01:54,313 P7_PROFILE 2022-06-28T21:01:54,369 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o from vendor/hmmer/src/hmmdwrkr_shard.c 2022-06-28T21:01:54,370 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/hmmdwrkr_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o 2022-06-28T21:01:54,375 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o from vendor/hmmer/src/modelconfig.c 2022-06-28T21:01:54,378 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/modelconfig.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o 2022-06-28T21:01:54,479 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o from vendor/hmmer/src/hmmdmstr_shard.c 2022-06-28T21:01:54,480 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/hmmdmstr_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o 2022-06-28T21:01:54,570 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o from vendor/hmmer/src/hmmdutils.c 2022-06-28T21:01:54,571 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/hmmdutils.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o 2022-06-28T21:01:54,674 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o from vendor/hmmer/src/hmmd_search_status.c 2022-06-28T21:01:54,675 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/hmmd_search_status.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o 2022-06-28T21:01:54,760 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o from vendor/hmmer/src/hmmer.c 2022-06-28T21:01:54,760 In file included from vendor/hmmer/src/generic_vtrace.c:14: 2022-06-28T21:01:54,761 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:54,761 #error "No vector implementation enabled" 2022-06-28T21:01:54,762 ^~~~~ 2022-06-28T21:01:54,762 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/hmmer.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o 2022-06-28T21:01:54,763 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,763 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:54,764 ^~~~~~ 2022-06-28T21:01:54,765 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,765 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:54,766 ^~~~~~ 2022-06-28T21:01:54,766 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,766 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:54,767 ^~~~~~ 2022-06-28T21:01:54,775 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,776 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:54,776 ^~~~~~ 2022-06-28T21:01:54,777 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,777 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:54,778 ^~~~~~~~~~~ 2022-06-28T21:01:54,778 P7_PROFILE 2022-06-28T21:01:54,779 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,779 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:54,780 ^~~~~~~~~~~ 2022-06-28T21:01:54,780 P7_PROFILE 2022-06-28T21:01:54,780 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,781 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:54,781 ^~~~~~~~~~~ 2022-06-28T21:01:54,782 P7_PROFILE 2022-06-28T21:01:54,782 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,782 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:54,783 ^~~~~~~~~~~ 2022-06-28T21:01:54,783 P7_PROFILE 2022-06-28T21:01:54,784 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,785 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:54,785 ^~~~~~~~~~~ 2022-06-28T21:01:54,789 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,790 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:54,790 ^~~~~~~~~~~ 2022-06-28T21:01:54,791 P7_PROFILE 2022-06-28T21:01:54,791 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,792 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:54,792 ^~~~~~~~~~~ 2022-06-28T21:01:54,793 P7_PROFILE 2022-06-28T21:01:54,801 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,802 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,803 ^~~~~~~~~~~ 2022-06-28T21:01:54,803 P7_PROFILE 2022-06-28T21:01:54,804 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,804 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,805 ^~~~~~ 2022-06-28T21:01:54,805 P7_GMX 2022-06-28T21:01:54,806 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,807 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,807 ^~~~~~ 2022-06-28T21:01:54,808 P7_GMX 2022-06-28T21:01:54,809 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,809 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,810 ^~~~~~ 2022-06-28T21:01:54,810 P7_GMX 2022-06-28T21:01:54,811 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,811 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,812 ^~~~~~ 2022-06-28T21:01:54,812 P7_GMX 2022-06-28T21:01:54,820 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,823 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:54,826 ^~~~~~~~~~~ 2022-06-28T21:01:54,827 P7_PROFILE 2022-06-28T21:01:54,829 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,830 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:54,831 ^~~~~~~~~~~ 2022-06-28T21:01:54,831 P7_PROFILE 2022-06-28T21:01:54,832 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,833 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:54,833 ^~~~~~~~~~~ 2022-06-28T21:01:54,834 P7_PROFILE 2022-06-28T21:01:54,834 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,835 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:54,835 ^~~~~~~~~~~ 2022-06-28T21:01:54,835 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,836 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:54,836 ^~~~~~~~~~~ 2022-06-28T21:01:54,837 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,837 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:54,838 ^~~~~~~~~~~ 2022-06-28T21:01:54,838 P7_PROFILE 2022-06-28T21:01:54,839 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,839 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:54,840 ^~~~~~~~~~~ 2022-06-28T21:01:54,840 P7_PROFILE 2022-06-28T21:01:54,842 In file included from vendor/hmmer/src/modelconfig.c:25: 2022-06-28T21:01:54,843 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:54,843 #error "No vector implementation enabled" 2022-06-28T21:01:54,844 ^~~~~ 2022-06-28T21:01:54,845 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,846 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:54,846 ^~~~~~~~~~~ 2022-06-28T21:01:54,847 P7_PROFILE 2022-06-28T21:01:54,847 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,848 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:54,848 ^~~~~~ 2022-06-28T21:01:54,849 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,850 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:54,850 ^~~~~~ 2022-06-28T21:01:54,851 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,851 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:54,852 ^~~~~~ 2022-06-28T21:01:54,852 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:54,853 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:54,854 ^~~~~~ 2022-06-28T21:01:54,855 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,855 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:54,856 ^~~~~~~~~~~ 2022-06-28T21:01:54,856 P7_PROFILE 2022-06-28T21:01:54,857 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,858 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:54,858 ^~~~~~~~~~~ 2022-06-28T21:01:54,859 P7_PROFILE 2022-06-28T21:01:54,861 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,862 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:54,862 ^~~~~~~~~~~ 2022-06-28T21:01:54,863 P7_PROFILE 2022-06-28T21:01:54,864 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,865 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:54,865 ^~~~~~~~~~~ 2022-06-28T21:01:54,865 P7_PROFILE 2022-06-28T21:01:54,867 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,868 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:54,869 ^~~~~~~~~~~ 2022-06-28T21:01:54,873 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,874 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:54,874 ^~~~~~~~~~~ 2022-06-28T21:01:54,875 P7_PROFILE 2022-06-28T21:01:54,876 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,877 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:54,878 ^~~~~~~~~~~ 2022-06-28T21:01:54,879 P7_PROFILE 2022-06-28T21:01:54,881 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,882 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,883 ^~~~~~~~~~~ 2022-06-28T21:01:54,884 P7_PROFILE 2022-06-28T21:01:54,885 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,886 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,887 ^~~~~~ 2022-06-28T21:01:54,887 P7_GMX 2022-06-28T21:01:54,889 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,890 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,891 ^~~~~~ 2022-06-28T21:01:54,891 P7_GMX 2022-06-28T21:01:54,893 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,894 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,894 ^~~~~~ 2022-06-28T21:01:54,895 P7_GMX 2022-06-28T21:01:54,896 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:54,897 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:54,897 ^~~~~~ 2022-06-28T21:01:54,898 P7_GMX 2022-06-28T21:01:54,903 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,904 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:54,904 ^~~~~~~~~~~ 2022-06-28T21:01:54,905 P7_PROFILE 2022-06-28T21:01:54,908 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,909 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:54,910 ^~~~~~~~~~~ 2022-06-28T21:01:54,910 P7_PROFILE 2022-06-28T21:01:54,912 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,913 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:54,913 ^~~~~~~~~~~ 2022-06-28T21:01:54,914 P7_PROFILE 2022-06-28T21:01:54,915 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,915 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:54,916 ^~~~~~~~~~~ 2022-06-28T21:01:54,916 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:54,917 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:54,918 ^~~~~~~~~~~ 2022-06-28T21:01:54,918 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,919 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:54,920 ^~~~~~~~~~~ 2022-06-28T21:01:54,920 P7_PROFILE 2022-06-28T21:01:54,921 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,921 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:54,922 ^~~~~~~~~~~ 2022-06-28T21:01:54,922 P7_PROFILE 2022-06-28T21:01:54,929 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:54,930 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:54,930 ^~~~~~~~~~~ 2022-06-28T21:01:54,931 P7_PROFILE 2022-06-28T21:01:54,942 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o from vendor/hmmer/src/tracealign.c 2022-06-28T21:01:54,944 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/tracealign.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o 2022-06-28T21:01:54,991 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o from vendor/hmmer/src/p7_domain.c 2022-06-28T21:01:54,993 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/p7_domain.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o 2022-06-28T21:01:55,157 In file included from vendor/hmmer/src/hmmd_search_status.c:18: 2022-06-28T21:01:55,158 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:55,158 #error "No vector implementation enabled" 2022-06-28T21:01:55,158 ^~~~~ 2022-06-28T21:01:55,162 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,163 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:55,163 ^~~~~~ 2022-06-28T21:01:55,164 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,165 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:55,165 ^~~~~~ 2022-06-28T21:01:55,166 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,166 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:55,167 ^~~~~~ 2022-06-28T21:01:55,168 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,169 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:55,170 ^~~~~~ 2022-06-28T21:01:55,176 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,176 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:55,177 ^~~~~~~~~~~ 2022-06-28T21:01:55,177 P7_PROFILE 2022-06-28T21:01:55,182 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,182 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:55,183 ^~~~~~~~~~~ 2022-06-28T21:01:55,183 P7_PROFILE 2022-06-28T21:01:55,187 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,188 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:55,188 ^~~~~~~~~~~ 2022-06-28T21:01:55,189 P7_PROFILE 2022-06-28T21:01:55,193 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,193 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:55,194 ^~~~~~~~~~~ 2022-06-28T21:01:55,194 P7_PROFILE 2022-06-28T21:01:55,199 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,199 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:55,200 ^~~~~~~~~~~ 2022-06-28T21:01:55,206 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,206 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:55,207 ^~~~~~~~~~~ 2022-06-28T21:01:55,207 P7_PROFILE 2022-06-28T21:01:55,211 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,212 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:55,212 ^~~~~~~~~~~ 2022-06-28T21:01:55,213 P7_PROFILE 2022-06-28T21:01:55,218 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,218 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,219 ^~~~~~~~~~~ 2022-06-28T21:01:55,219 P7_PROFILE 2022-06-28T21:01:55,223 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,223 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,224 ^~~~~~ 2022-06-28T21:01:55,224 P7_GMX 2022-06-28T21:01:55,228 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,229 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,229 ^~~~~~ 2022-06-28T21:01:55,230 P7_GMX 2022-06-28T21:01:55,234 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,235 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,235 ^~~~~~ 2022-06-28T21:01:55,236 P7_GMX 2022-06-28T21:01:55,239 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,240 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,240 ^~~~~~ 2022-06-28T21:01:55,241 P7_GMX 2022-06-28T21:01:55,247 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,248 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:55,248 ^~~~~~~~~~~ 2022-06-28T21:01:55,249 P7_PROFILE 2022-06-28T21:01:55,253 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,253 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:55,253 ^~~~~~~~~~~ 2022-06-28T21:01:55,254 P7_PROFILE 2022-06-28T21:01:55,258 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,259 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:55,259 ^~~~~~~~~~~ 2022-06-28T21:01:55,259 P7_PROFILE 2022-06-28T21:01:55,261 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,261 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:55,262 ^~~~~~~~~~~ 2022-06-28T21:01:55,263 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,263 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:55,263 ^~~~~~~~~~~ 2022-06-28T21:01:55,267 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,268 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:55,268 ^~~~~~~~~~~ 2022-06-28T21:01:55,269 P7_PROFILE 2022-06-28T21:01:55,273 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,273 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:55,274 ^~~~~~~~~~~ 2022-06-28T21:01:55,274 P7_PROFILE 2022-06-28T21:01:55,282 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,283 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:55,283 ^~~~~~~~~~~ 2022-06-28T21:01:55,284 P7_PROFILE 2022-06-28T21:01:55,312 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o from vendor/hmmer/src/p7_gmxb.c 2022-06-28T21:01:55,314 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/p7_gmxb.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o 2022-06-28T21:01:55,323 In file included from vendor/hmmer/src/hmmer.c:18: 2022-06-28T21:01:55,323 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:55,324 #error "No vector implementation enabled" 2022-06-28T21:01:55,324 ^~~~~ 2022-06-28T21:01:55,325 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,326 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:55,326 ^~~~~~ 2022-06-28T21:01:55,327 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,327 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:55,328 ^~~~~~ 2022-06-28T21:01:55,328 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,329 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:55,330 ^~~~~~ 2022-06-28T21:01:55,330 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,332 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:55,333 ^~~~~~ 2022-06-28T21:01:55,334 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,334 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:55,335 ^~~~~~~~~~~ 2022-06-28T21:01:55,335 P7_PROFILE 2022-06-28T21:01:55,336 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,337 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:55,337 ^~~~~~~~~~~ 2022-06-28T21:01:55,338 P7_PROFILE 2022-06-28T21:01:55,341 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,341 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:55,342 ^~~~~~~~~~~ 2022-06-28T21:01:55,342 P7_PROFILE 2022-06-28T21:01:55,343 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,343 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:55,344 ^~~~~~~~~~~ 2022-06-28T21:01:55,344 P7_PROFILE 2022-06-28T21:01:55,352 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,353 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:55,353 ^~~~~~~~~~~ 2022-06-28T21:01:55,354 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,355 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:55,355 ^~~~~~~~~~~ 2022-06-28T21:01:55,356 P7_PROFILE 2022-06-28T21:01:55,361 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,362 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:55,362 ^~~~~~~~~~~ 2022-06-28T21:01:55,363 P7_PROFILE 2022-06-28T21:01:55,364 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,364 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,365 ^~~~~~~~~~~ 2022-06-28T21:01:55,365 P7_PROFILE 2022-06-28T21:01:55,368 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,371 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,371 ^~~~~~ 2022-06-28T21:01:55,372 P7_GMX 2022-06-28T21:01:55,373 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,373 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,374 ^~~~~~ 2022-06-28T21:01:55,375 P7_GMX 2022-06-28T21:01:55,375 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,376 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,376 ^~~~~~ 2022-06-28T21:01:55,377 P7_GMX 2022-06-28T21:01:55,377 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,378 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,378 ^~~~~~ 2022-06-28T21:01:55,379 P7_GMX 2022-06-28T21:01:55,384 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,385 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:55,385 ^~~~~~~~~~~ 2022-06-28T21:01:55,386 P7_PROFILE 2022-06-28T21:01:55,388 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,389 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:55,390 ^~~~~~~~~~~ 2022-06-28T21:01:55,390 P7_PROFILE 2022-06-28T21:01:55,392 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,393 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:55,394 ^~~~~~~~~~~ 2022-06-28T21:01:55,395 P7_PROFILE 2022-06-28T21:01:55,395 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,396 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:55,396 ^~~~~~~~~~~ 2022-06-28T21:01:55,397 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,397 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:55,398 ^~~~~~~~~~~ 2022-06-28T21:01:55,399 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,400 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:55,409 ^~~~~~~~~~~ 2022-06-28T21:01:55,410 P7_PROFILE 2022-06-28T21:01:55,411 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,412 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:55,412 ^~~~~~~~~~~ 2022-06-28T21:01:55,413 P7_PROFILE 2022-06-28T21:01:55,413 In file included from vendor/hmmer/src/tracealign.c:15: 2022-06-28T21:01:55,414 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:55,414 #error "No vector implementation enabled" 2022-06-28T21:01:55,415 ^~~~~ 2022-06-28T21:01:55,416 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,416 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:55,420 ^~~~~~ 2022-06-28T21:01:55,440 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,440 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:55,441 ^~~~~~ 2022-06-28T21:01:55,441 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,441 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:55,442 ^~~~~~ 2022-06-28T21:01:55,442 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,443 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:55,443 ^~~~~~ 2022-06-28T21:01:55,443 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,444 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:55,444 ^~~~~~~~~~~ 2022-06-28T21:01:55,444 P7_PROFILE 2022-06-28T21:01:55,445 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,445 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:55,446 ^~~~~~~~~~~ 2022-06-28T21:01:55,446 P7_PROFILE 2022-06-28T21:01:55,446 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,447 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:55,447 ^~~~~~~~~~~ 2022-06-28T21:01:55,448 P7_PROFILE 2022-06-28T21:01:55,448 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,449 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:55,460 ^~~~~~~~~~~ 2022-06-28T21:01:55,460 P7_PROFILE 2022-06-28T21:01:55,461 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,462 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:55,463 ^~~~~~~~~~~ 2022-06-28T21:01:55,463 P7_PROFILE 2022-06-28T21:01:55,464 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,465 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:55,466 ^~~~~~~~~~~ 2022-06-28T21:01:55,467 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,467 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:55,468 ^~~~~~~~~~~ 2022-06-28T21:01:55,468 P7_PROFILE 2022-06-28T21:01:55,469 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o from vendor/hmmer/src/p7_hmmcache.c 2022-06-28T21:01:55,470 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,470 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:55,471 ^~~~~~~~~~~ 2022-06-28T21:01:55,472 P7_PROFILE 2022-06-28T21:01:55,472 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/p7_hmmcache.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o 2022-06-28T21:01:55,474 In file included from vendor/hmmer/src/p7_domain.c:16: 2022-06-28T21:01:55,474 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:55,475 #error "No vector implementation enabled" 2022-06-28T21:01:55,476 ^~~~~ 2022-06-28T21:01:55,476 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,477 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,477 ^~~~~~~~~~~ 2022-06-28T21:01:55,478 P7_PROFILE 2022-06-28T21:01:55,479 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,490 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:55,491 ^~~~~~ 2022-06-28T21:01:55,492 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,492 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:55,493 ^~~~~~ 2022-06-28T21:01:55,493 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,494 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:55,495 ^~~~~~ 2022-06-28T21:01:55,495 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,496 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:55,496 ^~~~~~ 2022-06-28T21:01:55,497 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,497 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,498 ^~~~~~ 2022-06-28T21:01:55,499 P7_GMX 2022-06-28T21:01:55,499 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,500 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:55,501 ^~~~~~~~~~~ 2022-06-28T21:01:55,502 P7_PROFILE 2022-06-28T21:01:55,502 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,503 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:55,503 ^~~~~~~~~~~ 2022-06-28T21:01:55,504 P7_PROFILE 2022-06-28T21:01:55,504 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,504 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:55,505 ^~~~~~~~~~~ 2022-06-28T21:01:55,505 P7_PROFILE 2022-06-28T21:01:55,506 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,506 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:55,507 ^~~~~~~~~~~ 2022-06-28T21:01:55,508 P7_PROFILE 2022-06-28T21:01:55,508 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,509 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:55,510 ^~~~~~~~~~~ 2022-06-28T21:01:55,511 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,511 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,512 ^~~~~~ 2022-06-28T21:01:55,513 P7_GMX 2022-06-28T21:01:55,513 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,514 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:55,514 ^~~~~~~~~~~ 2022-06-28T21:01:55,515 P7_PROFILE 2022-06-28T21:01:55,516 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,516 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,517 ^~~~~~ 2022-06-28T21:01:55,518 P7_GMX 2022-06-28T21:01:55,518 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,519 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:55,519 ^~~~~~~~~~~ 2022-06-28T21:01:55,520 P7_PROFILE 2022-06-28T21:01:55,520 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,521 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,522 ^~~~~~ 2022-06-28T21:01:55,523 P7_GMX 2022-06-28T21:01:55,524 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,524 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,525 ^~~~~~~~~~~ 2022-06-28T21:01:55,526 P7_PROFILE 2022-06-28T21:01:55,526 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,527 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,528 ^~~~~~ 2022-06-28T21:01:55,528 P7_GMX 2022-06-28T21:01:55,529 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,529 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,530 ^~~~~~ 2022-06-28T21:01:55,531 P7_GMX 2022-06-28T21:01:55,531 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,531 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,532 ^~~~~~ 2022-06-28T21:01:55,532 P7_GMX 2022-06-28T21:01:55,533 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,533 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,534 ^~~~~~ 2022-06-28T21:01:55,535 P7_GMX 2022-06-28T21:01:55,536 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,536 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:55,537 ^~~~~~~~~~~ 2022-06-28T21:01:55,537 P7_PROFILE 2022-06-28T21:01:55,538 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,538 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:55,538 ^~~~~~~~~~~ 2022-06-28T21:01:55,539 P7_PROFILE 2022-06-28T21:01:55,539 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,540 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:55,540 ^~~~~~~~~~~ 2022-06-28T21:01:55,541 P7_PROFILE 2022-06-28T21:01:55,541 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,546 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:55,547 ^~~~~~~~~~~ 2022-06-28T21:01:55,548 P7_PROFILE 2022-06-28T21:01:55,549 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,550 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:55,550 ^~~~~~~~~~~ 2022-06-28T21:01:55,551 P7_PROFILE 2022-06-28T21:01:55,551 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,552 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:55,553 ^~~~~~~~~~~ 2022-06-28T21:01:55,554 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,554 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:55,555 ^~~~~~~~~~~ 2022-06-28T21:01:55,556 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,556 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:55,557 ^~~~~~~~~~~ 2022-06-28T21:01:55,557 P7_PROFILE 2022-06-28T21:01:55,558 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,558 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:55,559 ^~~~~~~~~~~ 2022-06-28T21:01:55,559 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,560 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:55,561 ^~~~~~~~~~~ 2022-06-28T21:01:55,562 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,562 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:55,563 ^~~~~~~~~~~ 2022-06-28T21:01:55,564 P7_PROFILE 2022-06-28T21:01:55,564 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,565 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:55,565 ^~~~~~~~~~~ 2022-06-28T21:01:55,565 P7_PROFILE 2022-06-28T21:01:55,566 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,566 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:55,567 ^~~~~~~~~~~ 2022-06-28T21:01:55,568 P7_PROFILE 2022-06-28T21:01:55,568 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,569 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:55,570 ^~~~~~~~~~~ 2022-06-28T21:01:55,570 P7_PROFILE 2022-06-28T21:01:55,571 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,572 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:55,573 ^~~~~~~~~~~ 2022-06-28T21:01:55,573 P7_PROFILE 2022-06-28T21:01:55,574 vendor/hmmer/src/tracealign.c: In function ‘p7_tracealign_computeTraces’: 2022-06-28T21:01:55,575 vendor/hmmer/src/tracealign.c:239:3: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,575 P7_OMX *oxf = NULL; /* optimized Forward matrix */ 2022-06-28T21:01:55,576 ^~~~~~ 2022-06-28T21:01:55,577 P7_GMX 2022-06-28T21:01:55,578 vendor/hmmer/src/tracealign.c:240:3: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,578 P7_OMX *oxb = NULL; /* optimized Backward matrix */ 2022-06-28T21:01:55,579 ^~~~~~ 2022-06-28T21:01:55,579 P7_GMX 2022-06-28T21:01:55,580 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,580 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:55,581 ^~~~~~~~~~~ 2022-06-28T21:01:55,581 P7_PROFILE 2022-06-28T21:01:55,582 vendor/hmmer/src/tracealign.c:244:3: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,582 P7_OPROFILE *om = NULL; 2022-06-28T21:01:55,583 ^~~~~~~~~~~ 2022-06-28T21:01:55,584 P7_PROFILE 2022-06-28T21:01:55,585 vendor/hmmer/src/tracealign.c:255:8: warning: implicit declaration of function ‘p7_oprofile_Create’; did you mean ‘p7_profile_Create’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,585 om = p7_oprofile_Create(hmm->M, hmm->abc); 2022-06-28T21:01:55,586 ^~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,586 p7_profile_Create 2022-06-28T21:01:55,587 vendor/hmmer/src/tracealign.c:255:6: warning: assignment to ‘int *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2022-06-28T21:01:55,588 om = p7_oprofile_Create(hmm->M, hmm->abc); 2022-06-28T21:01:55,588 ^ 2022-06-28T21:01:55,589 vendor/hmmer/src/tracealign.c:258:3: warning: implicit declaration of function ‘p7_oprofile_Convert’; did you mean ‘p7_profile_Compare’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,590 p7_oprofile_Convert(gm, om); 2022-06-28T21:01:55,591 ^~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,592 p7_profile_Compare 2022-06-28T21:01:55,592 vendor/hmmer/src/tracealign.c:261:9: warning: implicit declaration of function ‘p7_omx_Create’; did you mean ‘p7_gmx_Create’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,593 oxf = p7_omx_Create(hmm->M, sq[offset]->n, sq[offset]->n); 2022-06-28T21:01:55,594 ^~~~~~~~~~~~~ 2022-06-28T21:01:55,594 p7_gmx_Create 2022-06-28T21:01:55,595 vendor/hmmer/src/tracealign.c:261:7: warning: assignment to ‘int *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2022-06-28T21:01:55,596 oxf = p7_omx_Create(hmm->M, sq[offset]->n, sq[offset]->n); 2022-06-28T21:01:55,597 ^ 2022-06-28T21:01:55,597 vendor/hmmer/src/tracealign.c:262:7: warning: assignment to ‘int *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2022-06-28T21:01:55,598 oxb = p7_omx_Create(hmm->M, sq[offset]->n, sq[offset]->n); 2022-06-28T21:01:55,598 ^ 2022-06-28T21:01:55,599 vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Serialize’: 2022-06-28T21:01:55,599 vendor/hmmer/src/p7_domain.c:191:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,600 network_32bit = esl_hton32(*((uint32_t *) &(obj->envsc))); // ow, this hurts, but is probably the best way to get the 2022-06-28T21:01:55,601 ~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,601 vendor/hmmer/src/p7_domain.c:198:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,602 network_32bit = esl_hton32(*((uint32_t *) &(obj->domcorrection))); 2022-06-28T21:01:55,603 ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,603 vendor/hmmer/src/p7_domain.c:203:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,604 network_32bit = esl_hton32(*((uint32_t *) &(obj->dombias))); 2022-06-28T21:01:55,605 ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,606 vendor/hmmer/src/p7_domain.c:208:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,607 network_32bit = esl_hton32(*((uint32_t *) &(obj->oasc))); 2022-06-28T21:01:55,608 ~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,609 vendor/hmmer/src/p7_domain.c:213:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,609 network_32bit = esl_hton32(*((uint32_t *) &(obj->bitscore))); 2022-06-28T21:01:55,610 ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,610 vendor/hmmer/src/tracealign.c:271:5: warning: implicit declaration of function ‘p7_omx_GrowTo’; did you mean ‘p7_gmx_GrowTo’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,611 p7_omx_GrowTo(oxf, hmm->M, sq[idx]->n, sq[idx]->n); 2022-06-28T21:01:55,612 ^~~~~~~~~~~~~ 2022-06-28T21:01:55,612 p7_gmx_GrowTo 2022-06-28T21:01:55,613 vendor/hmmer/src/p7_domain.c:218:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,613 network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP))); 2022-06-28T21:01:55,614 ~^~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,614 vendor/hmmer/src/p7_domain.c:253:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:55,615 if (ser_size != ptr - (*buf + *n)){ 2022-06-28T21:01:55,615 ^~ 2022-06-28T21:01:55,616 vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Deserialize’: 2022-06-28T21:01:55,616 vendor/hmmer/src/p7_domain.c:341:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,617 ret_obj->envsc = *((float *) &host_32bit); 2022-06-28T21:01:55,618 ~^~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,618 vendor/hmmer/src/p7_domain.c:347:30: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,619 ret_obj->domcorrection = *((float *) &host_32bit); 2022-06-28T21:01:55,619 ~^~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,620 vendor/hmmer/src/p7_domain.c:353:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,620 ret_obj->dombias = *((float *) &host_32bit); 2022-06-28T21:01:55,621 ~^~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,621 vendor/hmmer/src/p7_domain.c:359:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,622 ret_obj->oasc = *((float *) &host_32bit); 2022-06-28T21:01:55,622 ~^~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,623 vendor/hmmer/src/p7_domain.c:365:25: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,623 ret_obj->bitscore = *((float *) &host_32bit); 2022-06-28T21:01:55,624 ~^~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,640 vendor/hmmer/src/p7_domain.c:371:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,640 ret_obj->lnP = *((double *) &host_64bit); 2022-06-28T21:01:55,641 ~^~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,641 vendor/hmmer/src/tracealign.c:274:5: warning: implicit declaration of function ‘p7_oprofile_ReconfigLength’; did you mean ‘p7_ReconfigLength’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,642 p7_oprofile_ReconfigLength(om, sq[idx]->n); 2022-06-28T21:01:55,642 ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,643 p7_ReconfigLength 2022-06-28T21:01:55,643 vendor/hmmer/src/p7_domain.c:398:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2022-06-28T21:01:55,644 ret_obj->scores_per_pos[i] = *((float *) &host_32bit); 2022-06-28T21:01:55,644 ~^~~~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,645 vendor/hmmer/src/p7_domain.c:404:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:55,645 if(ptr - (buf + *n) != obj_size){ 2022-06-28T21:01:55,645 ^~ 2022-06-28T21:01:55,646 vendor/hmmer/src/tracealign.c:276:5: warning: implicit declaration of function ‘p7_Forward’; did you mean ‘p7_GForward’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,647 p7_Forward (sq[idx]->dsq, sq[idx]->n, om, oxf, &fwdsc); 2022-06-28T21:01:55,647 ^~~~~~~~~~ 2022-06-28T21:01:55,648 p7_GForward 2022-06-28T21:01:55,649 vendor/hmmer/src/tracealign.c:277:5: warning: implicit declaration of function ‘p7_Backward’; did you mean ‘p7_GBackward’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,649 p7_Backward(sq[idx]->dsq, sq[idx]->n, om, oxf, oxb, NULL); 2022-06-28T21:01:55,660 ^~~~~~~~~~~ 2022-06-28T21:01:55,661 p7_GBackward 2022-06-28T21:01:55,662 vendor/hmmer/src/tracealign.c:279:14: warning: implicit declaration of function ‘p7_Decoding’; did you mean ‘p7_GDecoding’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,663 status = p7_Decoding(om, oxf, oxb, oxb); /* is now overwritten with post probabilities */ 2022-06-28T21:01:55,663 ^~~~~~~~~~~ 2022-06-28T21:01:55,664 p7_GDecoding 2022-06-28T21:01:55,664 vendor/hmmer/src/tracealign.c:283:9: warning: implicit declaration of function ‘p7_OptimalAccuracy’; did you mean ‘p7_GOptimalAccuracy’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,665 p7_OptimalAccuracy(om, oxb, oxf, &oasc); /* is now overwritten with OA scores */ 2022-06-28T21:01:55,665 ^~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,666 p7_GOptimalAccuracy 2022-06-28T21:01:55,666 vendor/hmmer/src/tracealign.c:284:9: warning: implicit declaration of function ‘p7_OATrace’; did you mean ‘p7_GOATrace’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,667 p7_OATrace (om, oxb, oxf, tr[idx]); /* tr[idx] is now an OA traceback for seq #idx */ 2022-06-28T21:01:55,668 ^~~~~~~~~~ 2022-06-28T21:01:55,668 p7_GOATrace 2022-06-28T21:01:55,669 vendor/hmmer/src/tracealign.c:346:5: warning: implicit declaration of function ‘p7_omx_Reuse’; did you mean ‘p7_gmx_Reuse’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,680 p7_omx_Reuse(oxf); 2022-06-28T21:01:55,681 ^~~~~~~~~~~~ 2022-06-28T21:01:55,682 p7_gmx_Reuse 2022-06-28T21:01:55,682 vendor/hmmer/src/tracealign.c:357:3: warning: implicit declaration of function ‘p7_omx_Destroy’; did you mean ‘p7_gmx_Destroy’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,683 p7_omx_Destroy(oxf); 2022-06-28T21:01:55,684 ^~~~~~~~~~~~~~ 2022-06-28T21:01:55,685 p7_gmx_Destroy 2022-06-28T21:01:55,685 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o from vendor/hmmer/src/p7_prior.c 2022-06-28T21:01:55,686 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/p7_prior.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o 2022-06-28T21:01:55,687 vendor/hmmer/src/tracealign.c:363:3: warning: implicit declaration of function ‘p7_oprofile_Destroy’; did you mean ‘p7_profile_Destroy’? [-Wimplicit-function-declaration] 2022-06-28T21:01:55,687 p7_oprofile_Destroy(om); 2022-06-28T21:01:55,688 ^~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:55,689 p7_profile_Destroy 2022-06-28T21:01:55,804 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o from vendor/hmmer/src/p7_trace.c 2022-06-28T21:01:55,806 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/p7_trace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o 2022-06-28T21:01:55,878 In file included from vendor/hmmer/src/p7_gmxb.c:4: 2022-06-28T21:01:55,879 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:55,880 #error "No vector implementation enabled" 2022-06-28T21:01:55,880 ^~~~~ 2022-06-28T21:01:55,881 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,882 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:55,882 ^~~~~~ 2022-06-28T21:01:55,882 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,883 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:55,883 ^~~~~~ 2022-06-28T21:01:55,884 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,884 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:55,885 ^~~~~~ 2022-06-28T21:01:55,886 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,886 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:55,887 ^~~~~~ 2022-06-28T21:01:55,888 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,889 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:55,889 ^~~~~~~~~~~ 2022-06-28T21:01:55,890 P7_PROFILE 2022-06-28T21:01:55,890 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,891 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:55,892 ^~~~~~~~~~~ 2022-06-28T21:01:55,892 P7_PROFILE 2022-06-28T21:01:55,901 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,901 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:55,902 ^~~~~~~~~~~ 2022-06-28T21:01:55,902 P7_PROFILE 2022-06-28T21:01:55,903 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,903 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:55,904 ^~~~~~~~~~~ 2022-06-28T21:01:55,905 P7_PROFILE 2022-06-28T21:01:55,905 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,906 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:55,907 ^~~~~~~~~~~ 2022-06-28T21:01:55,907 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,908 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:55,908 ^~~~~~~~~~~ 2022-06-28T21:01:55,909 P7_PROFILE 2022-06-28T21:01:55,919 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,920 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:55,921 ^~~~~~~~~~~ 2022-06-28T21:01:55,921 P7_PROFILE 2022-06-28T21:01:55,922 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,922 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,923 ^~~~~~~~~~~ 2022-06-28T21:01:55,924 P7_PROFILE 2022-06-28T21:01:55,924 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,925 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,925 ^~~~~~ 2022-06-28T21:01:55,926 P7_GMX 2022-06-28T21:01:55,926 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,927 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,927 ^~~~~~ 2022-06-28T21:01:55,928 P7_GMX 2022-06-28T21:01:55,929 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,937 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,937 ^~~~~~ 2022-06-28T21:01:55,938 P7_GMX 2022-06-28T21:01:55,938 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:55,939 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:55,939 ^~~~~~ 2022-06-28T21:01:55,940 P7_GMX 2022-06-28T21:01:55,941 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,941 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:55,942 ^~~~~~~~~~~ 2022-06-28T21:01:55,942 P7_PROFILE 2022-06-28T21:01:55,943 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,944 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:55,944 ^~~~~~~~~~~ 2022-06-28T21:01:55,945 P7_PROFILE 2022-06-28T21:01:55,946 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,946 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:55,947 ^~~~~~~~~~~ 2022-06-28T21:01:55,947 P7_PROFILE 2022-06-28T21:01:55,948 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,948 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:55,949 ^~~~~~~~~~~ 2022-06-28T21:01:55,949 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,950 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:55,950 ^~~~~~~~~~~ 2022-06-28T21:01:55,951 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,952 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:55,953 ^~~~~~~~~~~ 2022-06-28T21:01:55,953 P7_PROFILE 2022-06-28T21:01:55,954 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,954 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:55,955 ^~~~~~~~~~~ 2022-06-28T21:01:55,955 P7_PROFILE 2022-06-28T21:01:55,956 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,957 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:55,957 ^~~~~~~~~~~ 2022-06-28T21:01:55,958 P7_PROFILE 2022-06-28T21:01:55,959 In file included from vendor/hmmer/src/p7_hmmcache.c:15: 2022-06-28T21:01:55,960 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:55,960 #error "No vector implementation enabled" 2022-06-28T21:01:55,961 ^~~~~ 2022-06-28T21:01:55,962 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,963 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:55,964 ^~~~~~ 2022-06-28T21:01:55,964 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,965 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:55,965 ^~~~~~ 2022-06-28T21:01:55,966 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,967 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:55,967 ^~~~~~ 2022-06-28T21:01:55,968 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:55,968 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:55,969 ^~~~~~ 2022-06-28T21:01:55,970 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,971 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:55,971 ^~~~~~~~~~~ 2022-06-28T21:01:55,972 P7_PROFILE 2022-06-28T21:01:55,974 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,975 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:55,976 ^~~~~~~~~~~ 2022-06-28T21:01:55,976 P7_PROFILE 2022-06-28T21:01:55,978 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,979 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:55,980 ^~~~~~~~~~~ 2022-06-28T21:01:55,980 P7_PROFILE 2022-06-28T21:01:55,981 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,982 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:55,982 ^~~~~~~~~~~ 2022-06-28T21:01:55,983 P7_PROFILE 2022-06-28T21:01:55,986 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:55,987 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:55,987 ^~~~~~~~~~~ 2022-06-28T21:01:55,991 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,992 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:55,993 ^~~~~~~~~~~ 2022-06-28T21:01:55,994 P7_PROFILE 2022-06-28T21:01:55,995 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,996 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:55,997 ^~~~~~~~~~~ 2022-06-28T21:01:55,997 P7_PROFILE 2022-06-28T21:01:55,997 generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o from vendor/hmmer/src/fm_general.c 2022-06-28T21:01:55,998 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -c vendor/hmmer/src/fm_general.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o 2022-06-28T21:01:55,998 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:55,999 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,000 ^~~~~~~~~~~ 2022-06-28T21:01:56,000 P7_PROFILE 2022-06-28T21:01:56,002 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,003 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,003 ^~~~~~ 2022-06-28T21:01:56,004 P7_GMX 2022-06-28T21:01:56,007 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,008 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,008 ^~~~~~ 2022-06-28T21:01:56,010 P7_GMX 2022-06-28T21:01:56,011 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,011 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,012 ^~~~~~ 2022-06-28T21:01:56,012 P7_GMX 2022-06-28T21:01:56,013 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,014 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,014 ^~~~~~ 2022-06-28T21:01:56,015 P7_GMX 2022-06-28T21:01:56,020 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,021 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:56,021 ^~~~~~~~~~~ 2022-06-28T21:01:56,022 P7_PROFILE 2022-06-28T21:01:56,027 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,028 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:56,028 ^~~~~~~~~~~ 2022-06-28T21:01:56,029 P7_PROFILE 2022-06-28T21:01:56,030 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,031 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:56,031 ^~~~~~~~~~~ 2022-06-28T21:01:56,032 P7_PROFILE 2022-06-28T21:01:56,032 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,033 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:56,033 ^~~~~~~~~~~ 2022-06-28T21:01:56,034 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,035 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:56,035 ^~~~~~~~~~~ 2022-06-28T21:01:56,036 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,036 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:56,037 ^~~~~~~~~~~ 2022-06-28T21:01:56,037 P7_PROFILE 2022-06-28T21:01:56,038 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,038 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:56,038 ^~~~~~~~~~~ 2022-06-28T21:01:56,039 P7_PROFILE 2022-06-28T21:01:56,047 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,049 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:56,050 ^~~~~~~~~~~ 2022-06-28T21:01:56,051 P7_PROFILE 2022-06-28T21:01:56,051 In file included from vendor/hmmer/src/p7_hmmcache.c:16: 2022-06-28T21:01:56,052 vendor/hmmer/src/p7_hmmcache.h:13:3: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,052 P7_OPROFILE **list; /* list of profiles [0 .. n-1] */ 2022-06-28T21:01:56,053 ^~~~~~~~~~~ 2022-06-28T21:01:56,054 vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Open’: 2022-06-28T21:01:56,057 vendor/hmmer/src/p7_hmmcache.c:55:3: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,057 P7_OPROFILE *om = NULL; /* target profile */ 2022-06-28T21:01:56,058 ^~~~~~~~~~~ 2022-06-28T21:01:56,058 P7_PROFILE 2022-06-28T21:01:56,063 In file included from vendor/hmmer/src/p7_hmmcache.c:13: 2022-06-28T21:01:56,064 vendor/hmmer/src/p7_hmmcache.c:66:33: error: ‘P7_OPROFILE’ undeclared (first use in this function); did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,064 ESL_ALLOC(cache->list, sizeof(P7_OPROFILE *) * cache->lalloc); 2022-06-28T21:01:56,065 ^~~~~~~~~~~ 2022-06-28T21:01:56,065 vendor/easel/easel.h:158:10: note: in definition of macro ‘ESL_ALLOC’ 2022-06-28T21:01:56,065 if ( size <= 0 ) { \ 2022-06-28T21:01:56,066 ^~~~ 2022-06-28T21:01:56,066 vendor/hmmer/src/p7_hmmcache.c:66:33: note: each undeclared identifier is reported only once for each function it appears in 2022-06-28T21:01:56,067 ESL_ALLOC(cache->list, sizeof(P7_OPROFILE *) * cache->lalloc); 2022-06-28T21:01:56,067 ^~~~~~~~~~~ 2022-06-28T21:01:56,068 vendor/easel/easel.h:158:10: note: in definition of macro ‘ESL_ALLOC’ 2022-06-28T21:01:56,068 if ( size <= 0 ) { \ 2022-06-28T21:01:56,069 ^~~~ 2022-06-28T21:01:56,070 vendor/hmmer/src/p7_hmmcache.c:66:46: error: expected expression before ‘)’ token 2022-06-28T21:01:56,070 ESL_ALLOC(cache->list, sizeof(P7_OPROFILE *) * cache->lalloc); 2022-06-28T21:01:56,071 ^ 2022-06-28T21:01:56,071 vendor/easel/easel.h:158:10: note: in definition of macro ‘ESL_ALLOC’ 2022-06-28T21:01:56,072 if ( size <= 0 ) { \ 2022-06-28T21:01:56,072 ^~~~ 2022-06-28T21:01:56,073 vendor/hmmer/src/p7_hmmcache.c:66:46: error: expected expression before ‘)’ token 2022-06-28T21:01:56,073 ESL_ALLOC(cache->list, sizeof(P7_OPROFILE *) * cache->lalloc); 2022-06-28T21:01:56,074 ^ 2022-06-28T21:01:56,074 vendor/easel/easel.h:164:24: note: in definition of macro ‘ESL_ALLOC’ 2022-06-28T21:01:56,075 if ( ((p) = malloc(size)) == NULL) { \ 2022-06-28T21:01:56,075 ^~~~ 2022-06-28T21:01:56,075 vendor/hmmer/src/p7_hmmcache.c:66:46: error: expected expression before ‘)’ token 2022-06-28T21:01:56,076 ESL_ALLOC(cache->list, sizeof(P7_OPROFILE *) * cache->lalloc); 2022-06-28T21:01:56,076 ^ 2022-06-28T21:01:56,077 vendor/easel/easel.h:166:85: note: in definition of macro ‘ESL_ALLOC’ 2022-06-28T21:01:56,078 esl_exception(status, FALSE, __FILE__, __LINE__, "malloc of size %d failed", size); \ 2022-06-28T21:01:56,078 ^~~~ 2022-06-28T21:01:56,079 vendor/hmmer/src/p7_hmmcache.c:70:20: warning: implicit declaration of function ‘p7_oprofile_ReadMSV’; did you mean ‘p7_profile_Reuse’? [-Wimplicit-function-declaration] 2022-06-28T21:01:56,079 while ((status = p7_oprofile_ReadMSV(hfp, &(cache->abc), &om)) == eslOK) /* eslEFORMAT | eslEINCOMPAT */ 2022-06-28T21:01:56,083 ^~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:56,087 p7_profile_Reuse 2022-06-28T21:01:56,093 vendor/hmmer/src/p7_hmmcache.c:72:22: warning: implicit declaration of function ‘p7_oprofile_ReadRest’; did you mean ‘p7_profile_Reuse’? [-Wimplicit-function-declaration] 2022-06-28T21:01:56,094 if (( status = p7_oprofile_ReadRest(hfp, om)) != eslOK) break; /* eslEFORMAT */ 2022-06-28T21:01:56,095 ^~~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:56,095 p7_profile_Reuse 2022-06-28T21:01:56,096 vendor/hmmer/src/p7_hmmcache.c:91:14: warning: implicit declaration of function ‘p7_oprofile_Destroy’; did you mean ‘p7_profile_Destroy’? [-Wimplicit-function-declaration] 2022-06-28T21:01:56,097 if (om) p7_oprofile_Destroy(om); 2022-06-28T21:01:56,098 ^~~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:56,099 p7_profile_Destroy 2022-06-28T21:01:56,099 In file included from vendor/hmmer/src/p7_prior.c:11: 2022-06-28T21:01:56,102 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:56,110 #error "No vector implementation enabled" 2022-06-28T21:01:56,111 ^~~~~ 2022-06-28T21:01:56,111 vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Sizeof’: 2022-06-28T21:01:56,112 vendor/hmmer/src/p7_hmmcache.c:108:15: error: ‘P7_OPROFILE’ undeclared (first use in this function); did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,112 n += sizeof(P7_OPROFILE *) * cache->lalloc; /* cache->list */ 2022-06-28T21:01:56,113 ^~~~~~~~~~~ 2022-06-28T21:01:56,113 P7_PROFILE 2022-06-28T21:01:56,114 vendor/hmmer/src/p7_hmmcache.c:108:28: error: expected expression before ‘)’ token 2022-06-28T21:01:56,115 n += sizeof(P7_OPROFILE *) * cache->lalloc; /* cache->list */ 2022-06-28T21:01:56,115 ^ 2022-06-28T21:01:56,116 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,117 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:56,117 ^~~~~~ 2022-06-28T21:01:56,118 vendor/hmmer/src/p7_hmmcache.c:110:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,118 for (i = 0; i < cache->n; i++) 2022-06-28T21:01:56,119 ^ 2022-06-28T21:01:56,136 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,137 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:56,138 ^~~~~~ 2022-06-28T21:01:56,138 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,138 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:56,139 ^~~~~~ 2022-06-28T21:01:56,139 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,139 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:56,140 ^~~~~~ 2022-06-28T21:01:56,140 vendor/hmmer/src/p7_hmmcache.c:111:10: warning: implicit declaration of function ‘p7_oprofile_Sizeof’; did you mean ‘p7_profile_Sizeof’? [-Wimplicit-function-declaration] 2022-06-28T21:01:56,141 n += p7_oprofile_Sizeof(cache->list[i]); 2022-06-28T21:01:56,141 ^~~~~~~~~~~~~~~~~~ 2022-06-28T21:01:56,141 p7_profile_Sizeof 2022-06-28T21:01:56,142 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,142 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:56,143 ^~~~~~~~~~~ 2022-06-28T21:01:56,143 P7_PROFILE 2022-06-28T21:01:56,143 vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_SetNumericNames’: 2022-06-28T21:01:56,144 vendor/hmmer/src/p7_hmmcache.c:134:3: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,144 P7_OPROFILE *om; 2022-06-28T21:01:56,145 ^~~~~~~~~~~ 2022-06-28T21:01:56,145 P7_PROFILE 2022-06-28T21:01:56,145 vendor/hmmer/src/p7_hmmcache.c:138:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,146 for (i = 0; i < cache->n; i++) 2022-06-28T21:01:56,146 ^ 2022-06-28T21:01:56,146 vendor/hmmer/src/p7_hmmcache.c:141:13: error: request for member ‘name’ in something not a structure or union 2022-06-28T21:01:56,147 if (om->name) free(om->name); 2022-06-28T21:01:56,147 ^~ 2022-06-28T21:01:56,147 vendor/hmmer/src/p7_hmmcache.c:141:28: error: request for member ‘name’ in something not a structure or union 2022-06-28T21:01:56,148 if (om->name) free(om->name); 2022-06-28T21:01:56,148 ^~ 2022-06-28T21:01:56,148 vendor/hmmer/src/p7_hmmcache.c:142:38: error: request for member ‘name’ in something not a structure or union 2022-06-28T21:01:56,149 if (( status = esl_sprintf(&(om->name), "%0*d", namelen, i+1)) != eslOK) return status; 2022-06-28T21:01:56,149 ^~ 2022-06-28T21:01:56,159 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,160 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:56,161 ^~~~~~~~~~~ 2022-06-28T21:01:56,161 P7_PROFILE 2022-06-28T21:01:56,162 vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Close’: 2022-06-28T21:01:56,162 vendor/hmmer/src/p7_hmmcache.c:161:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,163 for (i = 0; i < cache->n; i++) 2022-06-28T21:01:56,163 ^ 2022-06-28T21:01:56,164 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,164 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:56,165 ^~~~~~~~~~~ 2022-06-28T21:01:56,166 P7_PROFILE 2022-06-28T21:01:56,166 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,166 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:56,167 ^~~~~~~~~~~ 2022-06-28T21:01:56,168 P7_PROFILE 2022-06-28T21:01:56,168 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,169 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:56,170 ^~~~~~~~~~~ 2022-06-28T21:01:56,170 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,171 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:56,171 ^~~~~~~~~~~ 2022-06-28T21:01:56,172 P7_PROFILE 2022-06-28T21:01:56,172 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,173 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:56,174 ^~~~~~~~~~~ 2022-06-28T21:01:56,174 P7_PROFILE 2022-06-28T21:01:56,175 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,175 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,176 ^~~~~~~~~~~ 2022-06-28T21:01:56,176 P7_PROFILE 2022-06-28T21:01:56,177 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,177 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,178 ^~~~~~ 2022-06-28T21:01:56,178 P7_GMX 2022-06-28T21:01:56,178 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,179 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,179 ^~~~~~ 2022-06-28T21:01:56,180 P7_GMX 2022-06-28T21:01:56,180 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,181 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,181 ^~~~~~ 2022-06-28T21:01:56,182 P7_GMX 2022-06-28T21:01:56,182 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,183 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,183 ^~~~~~ 2022-06-28T21:01:56,184 P7_GMX 2022-06-28T21:01:56,184 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,185 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:56,185 ^~~~~~~~~~~ 2022-06-28T21:01:56,186 P7_PROFILE 2022-06-28T21:01:56,186 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,187 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:56,187 ^~~~~~~~~~~ 2022-06-28T21:01:56,188 P7_PROFILE 2022-06-28T21:01:56,188 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,188 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:56,189 ^~~~~~~~~~~ 2022-06-28T21:01:56,189 P7_PROFILE 2022-06-28T21:01:56,190 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,190 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:56,191 ^~~~~~~~~~~ 2022-06-28T21:01:56,191 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,191 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:56,192 ^~~~~~~~~~~ 2022-06-28T21:01:56,192 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,193 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:56,193 ^~~~~~~~~~~ 2022-06-28T21:01:56,193 P7_PROFILE 2022-06-28T21:01:56,193 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,194 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:56,194 ^~~~~~~~~~~ 2022-06-28T21:01:56,194 P7_PROFILE 2022-06-28T21:01:56,195 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,195 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:56,195 ^~~~~~~~~~~ 2022-06-28T21:01:56,196 P7_PROFILE 2022-06-28T21:01:56,314 In file included from vendor/hmmer/src/p7_trace.c:22: 2022-06-28T21:01:56,315 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:56,315 #error "No vector implementation enabled" 2022-06-28T21:01:56,315 ^~~~~ 2022-06-28T21:01:56,317 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,317 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:56,317 ^~~~~~ 2022-06-28T21:01:56,318 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,318 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:56,319 ^~~~~~ 2022-06-28T21:01:56,319 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,319 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:56,320 ^~~~~~ 2022-06-28T21:01:56,321 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,321 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:56,321 ^~~~~~ 2022-06-28T21:01:56,322 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,323 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:56,324 ^~~~~~~~~~~ 2022-06-28T21:01:56,324 P7_PROFILE 2022-06-28T21:01:56,326 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,326 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:56,327 ^~~~~~~~~~~ 2022-06-28T21:01:56,327 P7_PROFILE 2022-06-28T21:01:56,329 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,330 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:56,330 ^~~~~~~~~~~ 2022-06-28T21:01:56,331 P7_PROFILE 2022-06-28T21:01:56,332 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,332 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:56,333 ^~~~~~~~~~~ 2022-06-28T21:01:56,333 P7_PROFILE 2022-06-28T21:01:56,335 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,336 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:56,336 ^~~~~~~~~~~ 2022-06-28T21:01:56,340 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,341 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:56,341 ^~~~~~~~~~~ 2022-06-28T21:01:56,342 P7_PROFILE 2022-06-28T21:01:56,343 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,344 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:56,345 ^~~~~~~~~~~ 2022-06-28T21:01:56,345 P7_PROFILE 2022-06-28T21:01:56,347 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,348 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,349 ^~~~~~~~~~~ 2022-06-28T21:01:56,349 P7_PROFILE 2022-06-28T21:01:56,351 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,351 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,352 ^~~~~~ 2022-06-28T21:01:56,352 P7_GMX 2022-06-28T21:01:56,354 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,355 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,355 ^~~~~~ 2022-06-28T21:01:56,355 P7_GMX 2022-06-28T21:01:56,357 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,358 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,358 ^~~~~~ 2022-06-28T21:01:56,358 P7_GMX 2022-06-28T21:01:56,360 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,360 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,361 ^~~~~~ 2022-06-28T21:01:56,361 P7_GMX 2022-06-28T21:01:56,366 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,367 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:56,367 ^~~~~~~~~~~ 2022-06-28T21:01:56,368 P7_PROFILE 2022-06-28T21:01:56,371 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,371 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:56,372 ^~~~~~~~~~~ 2022-06-28T21:01:56,372 P7_PROFILE 2022-06-28T21:01:56,375 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,375 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:56,375 ^~~~~~~~~~~ 2022-06-28T21:01:56,376 P7_PROFILE 2022-06-28T21:01:56,377 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,377 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:56,378 ^~~~~~~~~~~ 2022-06-28T21:01:56,378 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,379 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:56,379 ^~~~~~~~~~~ 2022-06-28T21:01:56,380 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,381 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:56,381 ^~~~~~~~~~~ 2022-06-28T21:01:56,381 P7_PROFILE 2022-06-28T21:01:56,382 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,382 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:56,383 ^~~~~~~~~~~ 2022-06-28T21:01:56,383 P7_PROFILE 2022-06-28T21:01:56,390 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,390 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:56,390 ^~~~~~~~~~~ 2022-06-28T21:01:56,391 P7_PROFILE 2022-06-28T21:01:56,486 In file included from vendor/hmmer/src/fm_general.c:14: 2022-06-28T21:01:56,486 vendor/hmmer/src/hmmer.h:829:2: error: #error "No vector implementation enabled" 2022-06-28T21:01:56,487 #error "No vector implementation enabled" 2022-06-28T21:01:56,487 ^~~~~ 2022-06-28T21:01:56,488 vendor/hmmer/src/hmmer.h:1179:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,488 P7_OMX *oxf; /* one-row Forward matrix, accel pipe */ 2022-06-28T21:01:56,489 ^~~~~~ 2022-06-28T21:01:56,489 vendor/hmmer/src/hmmer.h:1180:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,490 P7_OMX *oxb; /* one-row Backward matrix, accel pipe */ 2022-06-28T21:01:56,490 ^~~~~~ 2022-06-28T21:01:56,490 vendor/hmmer/src/hmmer.h:1181:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,491 P7_OMX *fwd; /* full Fwd matrix for domain envelopes */ 2022-06-28T21:01:56,491 ^~~~~~ 2022-06-28T21:01:56,492 vendor/hmmer/src/hmmer.h:1182:3: error: unknown type name ‘P7_OMX’ 2022-06-28T21:01:56,492 P7_OMX *bck; /* full Bck matrix for domain envelopes */ 2022-06-28T21:01:56,493 ^~~~~~ 2022-06-28T21:01:56,494 vendor/hmmer/src/hmmer.h:1333:120: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,495 extern int p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE **byp_gm, P7_OPROFILE **byp_om); 2022-06-28T21:01:56,495 ^~~~~~~~~~~ 2022-06-28T21:01:56,496 P7_PROFILE 2022-06-28T21:01:56,498 vendor/hmmer/src/hmmer.h:1335:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,499 extern int p7_MSVMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_mmu); 2022-06-28T21:01:56,499 ^~~~~~~~~~~ 2022-06-28T21:01:56,500 P7_PROFILE 2022-06-28T21:01:56,501 vendor/hmmer/src/hmmer.h:1336:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,502 extern int p7_ViterbiMu (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double *ret_vmu); 2022-06-28T21:01:56,502 ^~~~~~~~~~~ 2022-06-28T21:01:56,503 P7_PROFILE 2022-06-28T21:01:56,504 vendor/hmmer/src/hmmer.h:1337:45: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,505 extern int p7_Tau (ESL_RANDOMNESS *r, P7_OPROFILE *om, P7_BG *bg, int L, int N, double lambda, double tailp, double *ret_tau); 2022-06-28T21:01:56,505 ^~~~~~~~~~~ 2022-06-28T21:01:56,505 P7_PROFILE 2022-06-28T21:01:56,508 vendor/hmmer/src/hmmer.h:1468:81: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,508 extern P7_ALIDISPLAY *p7_alidisplay_Create(const P7_TRACE *tr, int which, const P7_OPROFILE *om, const ESL_SQ *sq, const ESL_SQ *ntsq); 2022-06-28T21:01:56,508 ^~~~~~~~~~~ 2022-06-28T21:01:56,512 vendor/hmmer/src/hmmer.h:1511:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,513 extern int p7_Builder (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa); 2022-06-28T21:01:56,514 ^~~~~~~~~~~ 2022-06-28T21:01:56,514 P7_PROFILE 2022-06-28T21:01:56,515 vendor/hmmer/src/hmmer.h:1512:133: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,516 extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE **opt_tr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om); 2022-06-28T21:01:56,517 ^~~~~~~~~~~ 2022-06-28T21:01:56,517 P7_PROFILE 2022-06-28T21:01:56,519 vendor/hmmer/src/hmmer.h:1532:85: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,520 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,521 ^~~~~~~~~~~ 2022-06-28T21:01:56,521 P7_PROFILE 2022-06-28T21:01:56,522 vendor/hmmer/src/hmmer.h:1532:102: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,523 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,524 ^~~~~~ 2022-06-28T21:01:56,524 P7_GMX 2022-06-28T21:01:56,525 vendor/hmmer/src/hmmer.h:1532:115: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,526 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,527 ^~~~~~ 2022-06-28T21:01:56,527 P7_GMX 2022-06-28T21:01:56,528 vendor/hmmer/src/hmmer.h:1532:128: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,529 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,530 ^~~~~~ 2022-06-28T21:01:56,530 P7_GMX 2022-06-28T21:01:56,532 vendor/hmmer/src/hmmer.h:1532:141: error: unknown type name ‘P7_OMX’; did you mean ‘P7_GMX’? 2022-06-28T21:01:56,532 extern int p7_domaindef_ByPosteriorHeuristics(const ESL_SQ *sq, const ESL_SQ *ntsq, P7_OPROFILE *om, P7_OMX *oxf, P7_OMX *oxb, P7_OMX *fwd, P7_OMX *bck, 2022-06-28T21:01:56,532 ^~~~~~ 2022-06-28T21:01:56,533 P7_GMX 2022-06-28T21:01:56,537 vendor/hmmer/src/hmmer.h:1617:47: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,538 extern P7_SCOREDATA *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm ); 2022-06-28T21:01:56,539 ^~~~~~~~~~~ 2022-06-28T21:01:56,539 P7_PROFILE 2022-06-28T21:01:56,540 vendor/hmmer/src/hmmer.h:1619:51: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,541 extern int p7_hmm_ScoreDataComputeRest(P7_OPROFILE *om, P7_SCOREDATA *data ); 2022-06-28T21:01:56,541 ^~~~~~~~~~~ 2022-06-28T21:01:56,542 P7_PROFILE 2022-06-28T21:01:56,544 vendor/hmmer/src/hmmer.h:1636:42: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,544 extern int p7_pli_ExtendAndMergeWindows (P7_OPROFILE *om, const P7_SCOREDATA *msvdata, P7_HMM_WINDOWLIST *windowlist, float pct_overlap); 2022-06-28T21:01:56,545 ^~~~~~~~~~~ 2022-06-28T21:01:56,545 P7_PROFILE 2022-06-28T21:01:56,546 vendor/hmmer/src/hmmer.h:1642:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,547 extern int p7_pli_NewModel (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg); 2022-06-28T21:01:56,547 ^~~~~~~~~~~ 2022-06-28T21:01:56,548 vendor/hmmer/src/hmmer.h:1643:62: error: unknown type name ‘P7_OPROFILE’ 2022-06-28T21:01:56,548 extern int p7_pli_NewModelThresholds(P7_PIPELINE *pli, const P7_OPROFILE *om); 2022-06-28T21:01:56,549 ^~~~~~~~~~~ 2022-06-28T21:01:56,549 vendor/hmmer/src/hmmer.h:1645:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,550 extern int p7_Pipeline (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th); 2022-06-28T21:01:56,550 ^~~~~~~~~~~ 2022-06-28T21:01:56,551 P7_PROFILE 2022-06-28T21:01:56,551 vendor/hmmer/src/hmmer.h:1646:56: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,552 extern int p7_Pipeline_LongTarget (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data, 2022-06-28T21:01:56,552 ^~~~~~~~~~~ 2022-06-28T21:01:56,552 P7_PROFILE 2022-06-28T21:01:56,558 vendor/hmmer/src/hmmer.h:1803:33: error: unknown type name ‘P7_OPROFILE’; did you mean ‘P7_PROFILE’? 2022-06-28T21:01:56,559 extern int p7_SSVFM_longlarget( P7_OPROFILE *om, float nu, P7_BG *bg, double F1, 2022-06-28T21:01:56,559 ^~~~~~~~~~~ 2022-06-28T21:01:56,560 P7_PROFILE 2022-06-28T21:01:56,569 vendor/hmmer/src/fm_general.c: In function ‘fm_findOverlappingAmbiguityBlock’: 2022-06-28T21:01:56,570 vendor/hmmer/src/fm_general.c:292:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,570 if (ranges[lo].lower > end) return -1; 2022-06-28T21:01:56,570 ^ 2022-06-28T21:01:56,571 vendor/hmmer/src/fm_general.c:293:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,571 if (ranges[hi].upper < start) return -1; 2022-06-28T21:01:56,572 ^ 2022-06-28T21:01:56,572 vendor/hmmer/src/fm_general.c:297:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,573 if (ranges[mid].lower < start) lo = mid + 1; // too far left 2022-06-28T21:01:56,573 ^ 2022-06-28T21:01:56,573 vendor/hmmer/src/fm_general.c:302:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,574 if (lo>0 && ranges[lo-1].upper >= start && ranges[lo-1].lower <= end) return lo-1; 2022-06-28T21:01:56,574 ^~ 2022-06-28T21:01:56,575 vendor/hmmer/src/fm_general.c:302:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,575 if (lo>0 && ranges[lo-1].upper >= start && ranges[lo-1].lower <= end) return lo-1; 2022-06-28T21:01:56,575 ^~ 2022-06-28T21:01:56,576 vendor/hmmer/src/fm_general.c:303:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,576 else if ( ranges[lo].upper >= start && ranges[lo].lower <= end) return lo; 2022-06-28T21:01:56,576 ^~ 2022-06-28T21:01:56,577 vendor/hmmer/src/fm_general.c:303:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,577 else if ( ranges[lo].upper >= start && ranges[lo].lower <= end) return lo; 2022-06-28T21:01:56,577 ^~ 2022-06-28T21:01:56,578 vendor/hmmer/src/fm_general.c: In function ‘fm_convertRange2DSQ’: 2022-06-28T21:01:56,578 vendor/hmmer/src/fm_general.c:350:20: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2022-06-28T21:01:56,579 while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) { 2022-06-28T21:01:56,579 ^~ 2022-06-28T21:01:56,579 vendor/hmmer/src/fm_general.c:350:98: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,580 while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) { 2022-06-28T21:01:56,580 ^~ 2022-06-28T21:01:56,580 In file included from vendor/hmmer/src/fm_general.c:12: 2022-06-28T21:01:56,581 vendor/easel/easel.h:417:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,581 #define ESL_MAX(a,b) (((a)>(b))?(a):(b)) 2022-06-28T21:01:56,581 ^ 2022-06-28T21:01:56,582 vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’ 2022-06-28T21:01:56,582 int start = ESL_MAX(first, meta->ambig_list->ranges[pos].lower); 2022-06-28T21:01:56,582 ^~~~~~~ 2022-06-28T21:01:56,583 vendor/easel/easel.h:417:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare] 2022-06-28T21:01:56,583 #define ESL_MAX(a,b) (((a)>(b))?(a):(b)) 2022-06-28T21:01:56,583 ^~~ 2022-06-28T21:01:56,584 vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’ 2022-06-28T21:01:56,584 int start = ESL_MAX(first, meta->ambig_list->ranges[pos].lower); 2022-06-28T21:01:56,584 ^~~~~~~ 2022-06-28T21:01:56,585 vendor/easel/easel.h:416:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,585 #define ESL_MIN(a,b) (((a)<(b))?(a):(b)) 2022-06-28T21:01:56,585 ^ 2022-06-28T21:01:56,586 vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’ 2022-06-28T21:01:56,586 int end = ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper); 2022-06-28T21:01:56,586 ^~~~~~~ 2022-06-28T21:01:56,587 vendor/easel/easel.h:416:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare] 2022-06-28T21:01:56,587 #define ESL_MIN(a,b) (((a)<(b))?(a):(b)) 2022-06-28T21:01:56,587 ^~~ 2022-06-28T21:01:56,588 vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’ 2022-06-28T21:01:56,588 int end = ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper); 2022-06-28T21:01:56,588 ^~~~~~~ 2022-06-28T21:01:56,588 vendor/hmmer/src/fm_general.c:353:27: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,589 for (j= start; j<=end; j++) 2022-06-28T21:01:56,589 ^~ 2022-06-28T21:01:56,590 vendor/hmmer/src/fm_general.c: In function ‘fm_FM_read’: 2022-06-28T21:01:56,591 vendor/hmmer/src/fm_general.c:537:75: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 2022-06-28T21:01:56,591 (getAll && fread(fm->T, sizeof(uint8_t), compressed_bytes, meta->fp) != compressed_bytes) || 2022-06-28T21:01:56,591 ^~ 2022-06-28T21:01:56,592 vendor/hmmer/src/fm_general.c:538:68: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 2022-06-28T21:01:56,592 (fread(fm->BWT, sizeof(uint8_t), compressed_bytes, meta->fp) != compressed_bytes) || 2022-06-28T21:01:56,592 ^~ 2022-06-28T21:01:56,595 vendor/hmmer/src/fm_general.c: In function ‘fm_readFMmeta’: 2022-06-28T21:01:56,595 vendor/hmmer/src/fm_general.c:620:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,596 for (i=0; iseq_count; i++) { 2022-06-28T21:01:56,596 ^ 2022-06-28T21:01:56,600 vendor/hmmer/src/fm_general.c:638:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,601 fread(meta->seq_data[i].name, sizeof(char), meta->seq_data[i].name_length+1 , meta->fp) != meta->seq_data[i].name_length+1 || 2022-06-28T21:01:56,601 ^~ 2022-06-28T21:01:56,602 vendor/hmmer/src/fm_general.c:639:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,602 fread(meta->seq_data[i].acc, sizeof(char), meta->seq_data[i].acc_length+1 , meta->fp) != meta->seq_data[i].acc_length+1 || 2022-06-28T21:01:56,602 ^~ 2022-06-28T21:01:56,603 vendor/hmmer/src/fm_general.c:640:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,603 fread(meta->seq_data[i].source, sizeof(char), meta->seq_data[i].source_length+1 , meta->fp) != meta->seq_data[i].source_length+1 || 2022-06-28T21:01:56,603 ^~ 2022-06-28T21:01:56,604 vendor/hmmer/src/fm_general.c:641:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-06-28T21:01:56,604 fread(meta->seq_data[i].desc, sizeof(char), meta->seq_data[i].desc_length+1 , meta->fp) != meta->seq_data[i].desc_length+1 2022-06-28T21:01:56,604 ^~ 2022-06-28T21:01:56,605 vendor/hmmer/src/fm_general.c:651:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,605 for (i=0; iambig_list->count; i++) { 2022-06-28T21:01:56,605 ^ 2022-06-28T21:01:56,606 vendor/hmmer/src/fm_general.c:663:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,606 for (i=0; iseq_count; i++) 2022-06-28T21:01:56,606 ^ 2022-06-28T21:01:56,608 vendor/hmmer/src/fm_general.c: In function ‘fm_metaDestroy’: 2022-06-28T21:01:56,608 vendor/hmmer/src/fm_general.c:727:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2022-06-28T21:01:56,608 for (i=0; iseq_count; i++) { 2022-06-28T21:01:56,609 ^ 2022-06-28T21:01:56,744 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:01:56,746 ############################ 2022-06-28T21:01:56,746 # Package would be ignored # 2022-06-28T21:01:56,746 ############################ 2022-06-28T21:01:56,746 Python recognizes 'pyhmmer.tests.data.seqs' as an importable package, however it is 2022-06-28T21:01:56,747 included in the distribution as "data". 2022-06-28T21:01:56,747 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:01:56,747 therefore is considered deprecated). 2022-06-28T21:01:56,748 Please make sure that 'pyhmmer.tests.data.seqs' is included as a package by using 2022-06-28T21:01:56,748 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:01:56,749 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:01:56,749 documentation page. 2022-06-28T21:01:56,750 !! 2022-06-28T21:01:56,751 check.warn(importable) 2022-06-28T21:01:56,751 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:01:56,752 ############################ 2022-06-28T21:01:56,752 # Package would be ignored # 2022-06-28T21:01:56,753 ############################ 2022-06-28T21:01:56,753 Python recognizes 'pyhmmer.tests.data.tables' as an importable package, however it is 2022-06-28T21:01:56,753 included in the distribution as "data". 2022-06-28T21:01:56,753 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:01:56,754 therefore is considered deprecated). 2022-06-28T21:01:56,754 Please make sure that 'pyhmmer.tests.data.tables' is included as a package by using 2022-06-28T21:01:56,755 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:01:56,755 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:01:56,756 documentation page. 2022-06-28T21:01:56,756 !! 2022-06-28T21:01:56,757 check.warn(importable) 2022-06-28T21:01:56,757 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:01:56,758 ############################ 2022-06-28T21:01:56,758 # Package would be ignored # 2022-06-28T21:01:56,759 ############################ 2022-06-28T21:01:56,759 Python recognizes 'pyhmmer.tests.test_easel' as an importable package, however it is 2022-06-28T21:01:56,759 included in the distribution as "data". 2022-06-28T21:01:56,760 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:01:56,760 therefore is considered deprecated). 2022-06-28T21:01:56,761 Please make sure that 'pyhmmer.tests.test_easel' is included as a package by using 2022-06-28T21:01:56,761 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:01:56,761 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:01:56,762 documentation page. 2022-06-28T21:01:56,763 !! 2022-06-28T21:01:56,763 check.warn(importable) 2022-06-28T21:01:56,764 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-28T21:01:56,765 ############################ 2022-06-28T21:01:56,765 # Package would be ignored # 2022-06-28T21:01:56,766 ############################ 2022-06-28T21:01:56,766 Python recognizes 'pyhmmer.tests.test_plan7' as an importable package, however it is 2022-06-28T21:01:56,767 included in the distribution as "data". 2022-06-28T21:01:56,767 This behavior is likely to change in future versions of setuptools (and 2022-06-28T21:01:56,767 therefore is considered deprecated). 2022-06-28T21:01:56,769 Please make sure that 'pyhmmer.tests.test_plan7' is included as a package by using 2022-06-28T21:01:56,769 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-28T21:01:56,770 You can read more about "package discovery" and "data files" on setuptools 2022-06-28T21:01:56,770 documentation page. 2022-06-28T21:01:56,772 !! 2022-06-28T21:01:56,772 check.warn(importable) 2022-06-28T21:01:56,773 checking whether can be included... yes 2022-06-28T21:01:56,773 checking whether can be included... yes 2022-06-28T21:01:56,773 checking whether can be included... yes 2022-06-28T21:01:56,774 checking whether can be included... yes 2022-06-28T21:01:56,774 checking whether can be included... yes 2022-06-28T21:01:56,775 checking whether can be included... yes 2022-06-28T21:01:56,775 checking whether can be included... yes 2022-06-28T21:01:56,776 checking whether can be included... yes 2022-06-28T21:01:56,776 checking whether can be included... yes 2022-06-28T21:01:56,776 checking whether can be included... yes 2022-06-28T21:01:56,777 checking whether can be included... yes 2022-06-28T21:01:56,777 checking whether can be included... yes 2022-06-28T21:01:56,778 checking whether can be included... yes 2022-06-28T21:01:56,778 checking whether function 'aligned_alloc' is available... no 2022-06-28T21:01:56,779 checking whether function 'erfc' is available... no 2022-06-28T21:01:56,779 checking whether function 'getpid' is available... yes 2022-06-28T21:01:56,779 checking whether function '_mm_malloc' is available... no 2022-06-28T21:01:56,780 checking whether function 'popen' is available... yes 2022-06-28T21:01:56,780 checking whether function 'posix_memalign' is available... yes 2022-06-28T21:01:56,781 checking whether function 'strcasecmp' is available... yes 2022-06-28T21:01:56,781 checking whether function 'strsep' is available... yes 2022-06-28T21:01:56,781 checking whether function 'sysconf' is available... yes 2022-06-28T21:01:56,782 checking whether function 'sysctl' is available... yes 2022-06-28T21:01:56,782 checking whether function 'times' is available... yes 2022-06-28T21:01:56,783 checking whether function 'fseeko' is available... yes 2022-06-28T21:01:56,783 checking whether can be included... yes 2022-06-28T21:01:56,783 checking whether can be included... yes 2022-06-28T21:01:56,784 checking whether can be included... yes 2022-06-28T21:01:56,784 checking whether can be included... yes 2022-06-28T21:01:56,785 checking whether can be included... yes 2022-06-28T21:01:56,785 checking whether can be included... yes 2022-06-28T21:01:56,785 checking whether can be included... yes 2022-06-28T21:01:56,786 checking whether can be included... yes 2022-06-28T21:01:56,786 checking whether function 'mkstemp' is available... yes 2022-06-28T21:01:56,786 checking whether function 'popen' is available... yes 2022-06-28T21:01:56,787 checking whether function 'putenv' is available... yes 2022-06-28T21:01:56,787 checking whether function 'strcasecmp' is available... yes 2022-06-28T21:01:56,788 checking whether function 'strsep' is available... yes 2022-06-28T21:01:56,788 checking whether function 'times' is available... yes 2022-06-28T21:01:56,788 checking whether function 'getpid' is available... yes 2022-06-28T21:01:56,789 checking whether function 'sysctl' is available... yes 2022-06-28T21:01:56,789 checking whether function 'sysconf' is available... yes 2022-06-28T21:01:56,789 checking whether function 'getcwd' is available... yes 2022-06-28T21:01:56,790 checking whether function 'chmod' is available... yes 2022-06-28T21:01:56,790 checking whether function 'stat' is available... yes 2022-06-28T21:01:56,791 checking whether function 'fstat' is available... yes 2022-06-28T21:01:56,791 checking whether function 'erfc' is available... no 2022-06-28T21:01:56,791 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2022-06-28T21:01:57,036 ERROR: [present-rich] Building wheel for pyhmmer (pyproject.toml) exited with 1 2022-06-28T21:01:57,077 [bold magenta]full command[/]: [blue]/usr/bin/python3 /home/piwheels/.local/lib/python3.7/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmp3mbfxma_[/] 2022-06-28T21:01:57,078 [bold magenta]cwd[/]: /tmp/pip-wheel-1hv89nd8/pyhmmer_c892f60b122d4235979e8c2252ae803c 2022-06-28T21:01:57,078 Building wheel for pyhmmer (pyproject.toml): finished with status 'error' 2022-06-28T21:01:57,083 ERROR: Failed building wheel for pyhmmer 2022-06-28T21:01:57,088 Failed to build pyhmmer 2022-06-28T21:01:57,090 ERROR: Failed to build one or more wheels 2022-06-28T21:01:57,093 Exception information: 2022-06-28T21:01:57,093 Traceback (most recent call last): 2022-06-28T21:01:57,093 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper 2022-06-28T21:01:57,093 status = run_func(*args) 2022-06-28T21:01:57,093 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-06-28T21:01:57,093 return func(self, options, args) 2022-06-28T21:01:57,093 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/commands/wheel.py", line 176, in run 2022-06-28T21:01:57,093 raise CommandError("Failed to build one or more wheels") 2022-06-28T21:01:57,093 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2022-06-28T21:01:57,102 Removed build tracker: '/tmp/pip-build-tracker-ugft54_p'