2022-06-30T13:30:02,968 Created temporary directory: /tmp/pip-ephem-wheel-cache-ya_s7js_ 2022-06-30T13:30:02,974 Created temporary directory: /tmp/pip-build-tracker-3um2732q 2022-06-30T13:30:02,975 Initialized build tracking at /tmp/pip-build-tracker-3um2732q 2022-06-30T13:30:02,975 Created build tracker: /tmp/pip-build-tracker-3um2732q 2022-06-30T13:30:02,976 Entered build tracker: /tmp/pip-build-tracker-3um2732q 2022-06-30T13:30:02,977 Created temporary directory: /tmp/pip-wheel-j84paoki 2022-06-30T13:30:03,042 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-30T13:30:03,050 2 location(s) to search for versions of graphein: 2022-06-30T13:30:03,050 * https://pypi.org/simple/graphein/ 2022-06-30T13:30:03,050 * https://www.piwheels.org/simple/graphein/ 2022-06-30T13:30:03,051 Fetching project page and analyzing links: https://pypi.org/simple/graphein/ 2022-06-30T13:30:03,052 Getting page https://pypi.org/simple/graphein/ 2022-06-30T13:30:03,055 Found index url https://pypi.org/simple 2022-06-30T13:30:03,178 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/e1/df/4eceb1f0a4e2a15f293a3af97dbad5fbec1483b742f813d176d522e6b2f2/graphein-1.0.0-py2.py3-none-any.whl#sha256=7ce61ab0561abbfa7e349012db17b2b3a314e4dd13973e2e4653b5e6b040a4d2 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,178 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/1c/3c/721d31295bb62f80bd0601f5ec7ea1eed16e300cdeed67e551d11a0b9f28/graphein-1.0.0-py3-none-any.whl#sha256=53d97c60f663c8529af517bc7f25976280095862950b65aaa5176629c7a8ca11 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,180 Found link https://files.pythonhosted.org/packages/a3/03/5013dd08bf808fa89c2611704525a11c650edaf537025db2c8e78141d662/graphein-1.0.0.tar.gz#sha256=7cae0e1e1360eab504afcbc1d4023f79071b7a0c12f4b61366ee37cfced1e51c (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.0.0 2022-06-30T13:30:03,181 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/80/eb/4bd4946bb40dbb31386c574d1508098f24c654799d31efe56663106d2511/graphein-1.0.1-py2.py3-none-any.whl#sha256=f790bc3513477206b72e752953fe83a8b8d9507c83b90896882b779a6f4b6470 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,182 Found link https://files.pythonhosted.org/packages/89/6f/b26df468555a0d20537d8b6ee1f4fe4d9eaa0ac64e05c1231af0af2c3416/graphein-1.0.1.tar.gz#sha256=e03b3b83980ee07209f449d65b22d71f14e4e38715580299781e1711fccb5fd5 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.0.1 2022-06-30T13:30:03,183 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/06/e9/3f5486c9a20e79df858093d1a8a0d9f413aced6f8130b4b42d0aeed220ea/graphein-1.0.2-py2.py3-none-any.whl#sha256=54d9d75c0c6c09db656ce6e8cfe06b390e2f5dc52377ee11ece5e300a7462e18 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,184 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/72/5d/3e72490e7e504342a76fc520bd69c1af6550d13fe99f889767883adb5f76/graphein-1.0.2.tar.gz#sha256=f672bcdf2fb3e525ee5d12c24d8e7b5076a5e664cbc8af0fbca264cf4d85f298 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,185 Skipping link: 1.0.2 Requires-Python >=3.8: https://files.pythonhosted.org/packages/72/5d/3e72490e7e504342a76fc520bd69c1af6550d13fe99f889767883adb5f76/graphein-1.0.2.tar.gz#sha256=f672bcdf2fb3e525ee5d12c24d8e7b5076a5e664cbc8af0fbca264cf4d85f298 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,186 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/1d/da/cee96b84a42b058926a265f5336fcfd1b0ebb88762df7a2299d52382ce02/graphein-1.0.3-py2.py3-none-any.whl#sha256=0c6e830901c1704fcdb884833c56cfa4ecc50981b52508e5e4b8fc7d975de44a (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,186 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/98/f8/5c7e88d681fca9c214bc4e212840e281cf01e11c1b1288abac2600bba83d/graphein-1.0.3-py3-none-any.whl#sha256=8e2a20142ca049715032a75265fbbf63210833aa28eac71be2f5f8b9c0410a16 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,187 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/c0/4d/dcd09f879f83b6f76e8259529f268b53ba92e30075328b6000d12dc446f0/graphein-1.0.3.tar.gz#sha256=f6acb084af8dd90464698c6c992de4a8254c0ad777b786d164676a0e39af6fca (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,188 Skipping link: 1.0.3 Requires-Python >=3.8: https://files.pythonhosted.org/packages/c0/4d/dcd09f879f83b6f76e8259529f268b53ba92e30075328b6000d12dc446f0/graphein-1.0.3.tar.gz#sha256=f6acb084af8dd90464698c6c992de4a8254c0ad777b786d164676a0e39af6fca (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,189 Skipping link: No binaries permitted for graphein: https://files.pythonhosted.org/packages/67/ae/36d0f9a5d30ceb0948cfb14760194e2af3ec17cad898263500cea6a87c38/graphein-1.0.4-py3-none-any.whl#sha256=acab329191fc684f01b393422848045c855bfe2ee8f01990217d85be1c7724bf (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,190 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/7c/d2/52f3e53b623ec02094c2c4f9f6709b653af510fceb8c3afa5dc856c877e2/graphein-1.0.5.tar.gz#sha256=d0b0aa1143a160ac5453ab23a8eb616a63673168256c34f49f7d532b4d68f1ff (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,190 Skipping link: 1.0.5 Requires-Python >=3.8: https://files.pythonhosted.org/packages/7c/d2/52f3e53b623ec02094c2c4f9f6709b653af510fceb8c3afa5dc856c877e2/graphein-1.0.5.tar.gz#sha256=d0b0aa1143a160ac5453ab23a8eb616a63673168256c34f49f7d532b4d68f1ff (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,192 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ff/4e/f070a0a35583587d2f65c2a6c6279b47061037ece6f56e3ad5cf64ffb001/graphein-1.0.6.tar.gz#sha256=c5d32347c0638f72d520113e48322ea5831eeb06a52bafbbdf695a8dcacf1583 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,192 Skipping link: 1.0.6 Requires-Python >=3.8: https://files.pythonhosted.org/packages/ff/4e/f070a0a35583587d2f65c2a6c6279b47061037ece6f56e3ad5cf64ffb001/graphein-1.0.6.tar.gz#sha256=c5d32347c0638f72d520113e48322ea5831eeb06a52bafbbdf695a8dcacf1583 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,194 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/c0/1e/86942109d65323cdef5992c3189ef29adaf5a1df2af77f83235fa2bef5d4/graphein-1.0.7.tar.gz#sha256=2a8b42896da23338dde41f431d2caf5d4fcd79edbb19671908b48596c9b9165b (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,194 Skipping link: 1.0.7 Requires-Python >=3.8: https://files.pythonhosted.org/packages/c0/1e/86942109d65323cdef5992c3189ef29adaf5a1df2af77f83235fa2bef5d4/graphein-1.0.7.tar.gz#sha256=2a8b42896da23338dde41f431d2caf5d4fcd79edbb19671908b48596c9b9165b (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,195 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/88/19/ba458423a3873907a29173aec9ef8e88807c09f47419055b49ac07b6054f/graphein-1.0.8.tar.gz#sha256=416c54d27df94350d8c99c849ed790d64609a6900d74213b4ca751e6dde0e491 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,196 Skipping link: 1.0.8 Requires-Python >=3.8: https://files.pythonhosted.org/packages/88/19/ba458423a3873907a29173aec9ef8e88807c09f47419055b49ac07b6054f/graphein-1.0.8.tar.gz#sha256=416c54d27df94350d8c99c849ed790d64609a6900d74213b4ca751e6dde0e491 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,197 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/76/d6/290a9c52c47a9a2bf7ced78e3d5629100b0c29982affc27dfc8975109b67/graphein-1.0.9.tar.gz#sha256=f80bc3772d6b2b0a32f073ddcb157437f059c1eedd5e3265f8ff42192a988860 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,198 Skipping link: 1.0.9 Requires-Python >=3.8: https://files.pythonhosted.org/packages/76/d6/290a9c52c47a9a2bf7ced78e3d5629100b0c29982affc27dfc8975109b67/graphein-1.0.9.tar.gz#sha256=f80bc3772d6b2b0a32f073ddcb157437f059c1eedd5e3265f8ff42192a988860 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,199 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/3b/d7/f1a9e9d4ce008c1e89ee4f45964c83ffb1ebad056d72da758efe373a99be/graphein-1.0.10.tar.gz#sha256=93b265f9fad2c1f62eca1c78294051146888bf1dc5c4a25e08b0058bc11bafa1 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,199 Skipping link: 1.0.10 Requires-Python >=3.8: https://files.pythonhosted.org/packages/3b/d7/f1a9e9d4ce008c1e89ee4f45964c83ffb1ebad056d72da758efe373a99be/graphein-1.0.10.tar.gz#sha256=93b265f9fad2c1f62eca1c78294051146888bf1dc5c4a25e08b0058bc11bafa1 (from https://pypi.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,201 Found link https://files.pythonhosted.org/packages/da/65/f548cc2ca933290ad03d8e9d397d3be7a7c594804025430841b8dc122c8c/graphein-1.0.11.tar.gz#sha256=be4f880a06c0d6bcd9c0ac3e06f236a21cb319b437bc05043e6abc9dcb370634 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.0.11 2022-06-30T13:30:03,202 Found link https://files.pythonhosted.org/packages/b6/87/af6e9742d294a247570b7880f071d1a83f3533d72c830abb179bd5dd6220/graphein-1.1.0.tar.gz#sha256=e40f98f909c34051f013c4057c53678b9df7f132be5a8c73a46840cc3f4b3e0f (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.1.0 2022-06-30T13:30:03,204 Found link https://files.pythonhosted.org/packages/30/6a/bbd45a4d98796c419ca59a308f5c922114c8e62b9d4f82a1870e845bfb8d/graphein-1.1.1.tar.gz#sha256=ad6cf94bdc4d19d3a5869dc697cf8ec002077587040f10cb88528825a594cdea (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.1.1 2022-06-30T13:30:03,205 Found link https://files.pythonhosted.org/packages/11/47/0b277447627af7b09c80f8a3076d41fda8586be9005e58d9a13b2ecd9661/graphein-1.2.0.tar.gz#sha256=fa1fd8eab413394a7570fcea2801106d54c501a3186e8cb6fa54dfb3705d4b61 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.2.0 2022-06-30T13:30:03,206 Found link https://files.pythonhosted.org/packages/2f/96/51a1b3136a26034d251ad616a11f85eeb6da18fdaec6a4b56e512f484d8d/graphein-1.2.1.tar.gz#sha256=6c252059f6a6c8e3af566b8383120ab7b84ab9c00f1422ed6ee0b6a8091bbfb8 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.2.1 2022-06-30T13:30:03,208 Found link https://files.pythonhosted.org/packages/c0/01/cd844bc433848e2c7867558e96461b4af35754f113ce12c61164b580277a/graphein-1.3.0.tar.gz#sha256=01ba015efca409595b35820ef85ffbab64c2761f3b555f6ccae498b3a745c0be (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.3.0 2022-06-30T13:30:03,210 Found link https://files.pythonhosted.org/packages/f3/00/6e7d2fe8344a32b6151fa5a21eea77808cb3cd74ed950a7e2bc936930aba/graphein-1.4.0.tar.gz#sha256=c6cfcec3cd4790609598065490d14df57c74b7bb6fbdf6c4fa6fd08b6ec44fd1 (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.4.0 2022-06-30T13:30:03,211 Found link https://files.pythonhosted.org/packages/2c/d4/89d0285deed910d312fb8e7568e1771866494516502e53f3d90177b0e9ec/graphein-1.5.0rc1.tar.gz#sha256=5867b2bba513c147ec5fc4739ac98dd51b4fd40362b46d56512c7dd5af55ec7f (from https://pypi.org/simple/graphein/) (requires-python:>=3.7), version: 1.5.0rc1 2022-06-30T13:30:03,212 Fetching project page and analyzing links: https://www.piwheels.org/simple/graphein/ 2022-06-30T13:30:03,213 Getting page https://www.piwheels.org/simple/graphein/ 2022-06-30T13:30:03,215 Found index url https://www.piwheels.org/simple 2022-06-30T13:30:03,439 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.4.0-py3-none-any.whl#sha256=47c9f1af8010e0630d84661c65cc864839c5b9de29efb6b87cba83f80baf3dd9 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,439 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.3.0-py3-none-any.whl#sha256=3f3d8d40d7fe0e41321485c59beb446e1059c20230130f65e05f41f42a7f2cfd (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,440 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.2.1-py3-none-any.whl#sha256=64a567e969c56d176d660a920fbc594f8e57145381f0adc508aa8823eac9fbc5 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,441 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.2.0-py3-none-any.whl#sha256=81d9684e0d94db3d9c119d3adec4d8eaf463035b61d81358a7840ddf2a3df274 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,441 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.1.1-py3-none-any.whl#sha256=9d3678d7349525649efd7af810b18d5e580ca98f849f53af8a3d7a999f2dc989 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,442 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.1.0-py3-none-any.whl#sha256=e4f90ee7406bd6ce50d7293f4d316ca12d47937c25b3d56f3d04eaabdafb7277 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,442 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.0.11-py3-none-any.whl#sha256=c85e28c500dae9f61bef8c2b207a972cdcb7df71e664aab7554d9d1e626f7daa (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.7) 2022-06-30T13:30:03,443 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.0.10-py3-none-any.whl#sha256=679777e536b5a16495ac2832b91b51fb002948e550f85bba211c262d9309ea87 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,443 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.0.9-py3-none-any.whl#sha256=6fb031e0ae5af3c2d5b89021e514dd634f60dfa16c110dc4f3b78106236357f1 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,444 Skipping link: No binaries permitted for graphein: https://www.piwheels.org/simple/graphein/graphein-1.0.8-py3-none-any.whl#sha256=4513712c33b366001e166bedc7ec0ea9a10dfde0aa4745c7e94d154625da8108 (from https://www.piwheels.org/simple/graphein/) (requires-python:>=3.8) 2022-06-30T13:30:03,444 Skipping link: not a file: https://www.piwheels.org/simple/graphein/ 2022-06-30T13:30:03,445 Skipping link: not a file: https://pypi.org/simple/graphein/ 2022-06-30T13:30:03,485 Given no hashes to check 1 links for project 'graphein': discarding no candidates 2022-06-30T13:30:03,516 Collecting graphein==1.5.0rc1 2022-06-30T13:30:03,521 Created temporary directory: /tmp/pip-unpack-9jou9ess 2022-06-30T13:30:05,107 Downloading graphein-1.5.0rc1.tar.gz (21.5 MB) 2022-06-30T13:30:17,321 Added graphein==1.5.0rc1 from https://files.pythonhosted.org/packages/2c/d4/89d0285deed910d312fb8e7568e1771866494516502e53f3d90177b0e9ec/graphein-1.5.0rc1.tar.gz#sha256=5867b2bba513c147ec5fc4739ac98dd51b4fd40362b46d56512c7dd5af55ec7f to build tracker '/tmp/pip-build-tracker-3um2732q' 2022-06-30T13:30:17,333 Created temporary directory: /tmp/pip-build-env-nnpb9m5f 2022-06-30T13:30:17,347 Created temporary directory: /tmp/pip-standalone-pip-8irxo4_t 2022-06-30T13:30:19,897 Installing build dependencies: started 2022-06-30T13:30:19,900 Running command pip subprocess to install build dependencies 2022-06-30T13:30:29,564 Using pip 22.1.2 from /tmp/pip-standalone-pip-8irxo4_t/__env_pip__.zip/pip (python 3.7) 2022-06-30T13:30:31,284 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-06-30T13:30:35,284 Collecting setuptools>=40.8.0 2022-06-30T13:30:35,552 Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.6.0-py3-none-any.whl (1.2 MB) 2022-06-30T13:30:36,277 Collecting wheel 2022-06-30T13:30:36,310 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-06-30T13:30:44,914 Installing collected packages: wheel, setuptools 2022-06-30T13:30:45,177 Creating /tmp/pip-build-env-nnpb9m5f/overlay/bin 2022-06-30T13:30:45,181 changing mode of /tmp/pip-build-env-nnpb9m5f/overlay/bin/wheel to 755 2022-06-30T13:30:50,010 Successfully installed setuptools-62.6.0 wheel-0.37.1 2022-06-30T13:30:50,677 Installing build dependencies: finished with status 'done' 2022-06-30T13:30:50,707 Getting requirements to build wheel: started 2022-06-30T13:30:50,709 Running command Getting requirements to build wheel 2022-06-30T13:30:59,386 {'all': {'black', 2022-06-30T13:30:59,387 'flake8', 2022-06-30T13:30:59,387 'hypothesis', 2022-06-30T13:30:59,388 'interrogate', 2022-06-30T13:30:59,388 'isort', 2022-06-30T13:30:59,388 'nbstripout', 2022-06-30T13:30:59,389 'nbval', 2022-06-30T13:30:59,389 'pandoc', 2022-06-30T13:30:59,389 'pre-commit', 2022-06-30T13:30:59,390 'pycodestyle', 2022-06-30T13:30:59,390 'pydocstyle', 2022-06-30T13:30:59,391 'pytest', 2022-06-30T13:30:59,391 'pytest-cov', 2022-06-30T13:30:59,391 'pytest-xdist'}, 2022-06-30T13:30:59,392 'dev': ['black', 2022-06-30T13:30:59,392 'flake8', 2022-06-30T13:30:59,392 'hypothesis', 2022-06-30T13:30:59,393 'interrogate', 2022-06-30T13:30:59,393 'isort', 2022-06-30T13:30:59,393 'nbstripout', 2022-06-30T13:30:59,394 'nbval', 2022-06-30T13:30:59,394 'pandoc', 2022-06-30T13:30:59,395 'pre-commit', 2022-06-30T13:30:59,395 'pycodestyle', 2022-06-30T13:30:59,395 'pydocstyle', 2022-06-30T13:30:59,396 'pytest', 2022-06-30T13:30:59,396 'pytest-cov', 2022-06-30T13:30:59,397 'pytest-xdist'], 2022-06-30T13:30:59,397 'extras': ['black', 2022-06-30T13:30:59,397 'flake8', 2022-06-30T13:30:59,398 'hypothesis', 2022-06-30T13:30:59,398 'interrogate', 2022-06-30T13:30:59,398 'isort', 2022-06-30T13:30:59,399 'nbstripout', 2022-06-30T13:30:59,399 'nbval', 2022-06-30T13:30:59,399 'pandoc', 2022-06-30T13:30:59,400 'pre-commit', 2022-06-30T13:30:59,400 'pycodestyle', 2022-06-30T13:30:59,400 'pydocstyle', 2022-06-30T13:30:59,401 'pytest', 2022-06-30T13:30:59,401 'pytest-cov', 2022-06-30T13:30:59,401 'pytest-xdist']} 2022-06-30T13:30:59,402 running egg_info 2022-06-30T13:31:00,016 writing graphein.egg-info/PKG-INFO 2022-06-30T13:31:00,615 writing dependency_links to graphein.egg-info/dependency_links.txt 2022-06-30T13:31:02,394 writing entry points to graphein.egg-info/entry_points.txt 2022-06-30T13:31:03,586 writing requirements to graphein.egg-info/requires.txt 2022-06-30T13:31:04,185 writing top-level names to graphein.egg-info/top_level.txt 2022-06-30T13:31:05,025 reading manifest file 'graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:05,086 reading manifest template 'MANIFEST.in' 2022-06-30T13:31:05,192 warning: no files found matching '*include' under directory 'graphein/' 2022-06-30T13:31:05,262 warning: no files found matching 'versioneer.py' under directory 'graphein/' 2022-06-30T13:31:05,265 adding license file 'LICENSE' 2022-06-30T13:31:05,293 writing manifest file 'graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:05,515 Getting requirements to build wheel: finished with status 'done' 2022-06-30T13:31:05,536 Created temporary directory: /tmp/pip-modern-metadata-9lc4s2o3 2022-06-30T13:31:05,541 Preparing metadata (pyproject.toml): started 2022-06-30T13:31:05,543 Running command Preparing metadata (pyproject.toml) 2022-06-30T13:31:14,091 {'all': {'black', 2022-06-30T13:31:14,092 'flake8', 2022-06-30T13:31:14,092 'hypothesis', 2022-06-30T13:31:14,093 'interrogate', 2022-06-30T13:31:14,093 'isort', 2022-06-30T13:31:14,093 'nbstripout', 2022-06-30T13:31:14,094 'nbval', 2022-06-30T13:31:14,094 'pandoc', 2022-06-30T13:31:14,094 'pre-commit', 2022-06-30T13:31:14,094 'pycodestyle', 2022-06-30T13:31:14,095 'pydocstyle', 2022-06-30T13:31:14,095 'pytest', 2022-06-30T13:31:14,095 'pytest-cov', 2022-06-30T13:31:14,096 'pytest-xdist'}, 2022-06-30T13:31:14,096 'dev': ['black', 2022-06-30T13:31:14,096 'flake8', 2022-06-30T13:31:14,097 'hypothesis', 2022-06-30T13:31:14,097 'interrogate', 2022-06-30T13:31:14,097 'isort', 2022-06-30T13:31:14,097 'nbstripout', 2022-06-30T13:31:14,098 'nbval', 2022-06-30T13:31:14,098 'pandoc', 2022-06-30T13:31:14,098 'pre-commit', 2022-06-30T13:31:14,099 'pycodestyle', 2022-06-30T13:31:14,099 'pydocstyle', 2022-06-30T13:31:14,099 'pytest', 2022-06-30T13:31:14,101 'pytest-cov', 2022-06-30T13:31:14,101 'pytest-xdist'], 2022-06-30T13:31:14,101 'extras': ['black', 2022-06-30T13:31:14,102 'flake8', 2022-06-30T13:31:14,102 'hypothesis', 2022-06-30T13:31:14,102 'interrogate', 2022-06-30T13:31:14,102 'isort', 2022-06-30T13:31:14,103 'nbstripout', 2022-06-30T13:31:14,103 'nbval', 2022-06-30T13:31:14,103 'pandoc', 2022-06-30T13:31:14,104 'pre-commit', 2022-06-30T13:31:14,104 'pycodestyle', 2022-06-30T13:31:14,104 'pydocstyle', 2022-06-30T13:31:14,104 'pytest', 2022-06-30T13:31:14,105 'pytest-cov', 2022-06-30T13:31:14,105 'pytest-xdist']} 2022-06-30T13:31:14,105 running dist_info 2022-06-30T13:31:14,773 creating /tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info 2022-06-30T13:31:15,400 writing /tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/PKG-INFO 2022-06-30T13:31:15,996 writing dependency_links to /tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/dependency_links.txt 2022-06-30T13:31:17,773 writing entry points to /tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/entry_points.txt 2022-06-30T13:31:18,959 writing requirements to /tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/requires.txt 2022-06-30T13:31:19,557 writing top-level names to /tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/top_level.txt 2022-06-30T13:31:19,559 writing manifest file '/tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:20,408 reading manifest file '/tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:20,411 reading manifest template 'MANIFEST.in' 2022-06-30T13:31:20,513 warning: no files found matching '*include' under directory 'graphein/' 2022-06-30T13:31:20,575 warning: no files found matching 'versioneer.py' under directory 'graphein/' 2022-06-30T13:31:20,578 adding license file 'LICENSE' 2022-06-30T13:31:20,592 writing manifest file '/tmp/pip-modern-metadata-9lc4s2o3/graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:20,594 creating '/tmp/pip-modern-metadata-9lc4s2o3/graphein-1.5.0rc1.dist-info' 2022-06-30T13:31:20,981 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-30T13:31:21,209 Preparing metadata (pyproject.toml): finished with status 'done' 2022-06-30T13:31:21,228 Source in /tmp/pip-wheel-j84paoki/graphein_b9c5d30802fd499b89e0a71173cf6167 has version 1.5.0rc1, which satisfies requirement graphein==1.5.0rc1 from https://files.pythonhosted.org/packages/2c/d4/89d0285deed910d312fb8e7568e1771866494516502e53f3d90177b0e9ec/graphein-1.5.0rc1.tar.gz#sha256=5867b2bba513c147ec5fc4739ac98dd51b4fd40362b46d56512c7dd5af55ec7f 2022-06-30T13:31:21,230 Removed graphein==1.5.0rc1 from https://files.pythonhosted.org/packages/2c/d4/89d0285deed910d312fb8e7568e1771866494516502e53f3d90177b0e9ec/graphein-1.5.0rc1.tar.gz#sha256=5867b2bba513c147ec5fc4739ac98dd51b4fd40362b46d56512c7dd5af55ec7f from build tracker '/tmp/pip-build-tracker-3um2732q' 2022-06-30T13:31:21,249 Created temporary directory: /tmp/pip-unpack-m_bhv9ew 2022-06-30T13:31:21,250 Building wheels for collected packages: graphein 2022-06-30T13:31:21,260 Created temporary directory: /tmp/pip-wheel-twihiag0 2022-06-30T13:31:21,260 Destination directory: /tmp/pip-wheel-twihiag0 2022-06-30T13:31:21,265 Building wheel for graphein (pyproject.toml): started 2022-06-30T13:31:21,267 Running command Building wheel for graphein (pyproject.toml) 2022-06-30T13:31:29,143 {'all': {'black', 2022-06-30T13:31:29,144 'flake8', 2022-06-30T13:31:29,145 'hypothesis', 2022-06-30T13:31:29,145 'interrogate', 2022-06-30T13:31:29,145 'isort', 2022-06-30T13:31:29,146 'nbstripout', 2022-06-30T13:31:29,146 'nbval', 2022-06-30T13:31:29,146 'pandoc', 2022-06-30T13:31:29,147 'pre-commit', 2022-06-30T13:31:29,147 'pycodestyle', 2022-06-30T13:31:29,147 'pydocstyle', 2022-06-30T13:31:29,148 'pytest', 2022-06-30T13:31:29,148 'pytest-cov', 2022-06-30T13:31:29,148 'pytest-xdist'}, 2022-06-30T13:31:29,149 'dev': ['black', 2022-06-30T13:31:29,149 'flake8', 2022-06-30T13:31:29,150 'hypothesis', 2022-06-30T13:31:29,150 'interrogate', 2022-06-30T13:31:29,150 'isort', 2022-06-30T13:31:29,151 'nbstripout', 2022-06-30T13:31:29,151 'nbval', 2022-06-30T13:31:29,151 'pandoc', 2022-06-30T13:31:29,151 'pre-commit', 2022-06-30T13:31:29,152 'pycodestyle', 2022-06-30T13:31:29,152 'pydocstyle', 2022-06-30T13:31:29,152 'pytest', 2022-06-30T13:31:29,153 'pytest-cov', 2022-06-30T13:31:29,153 'pytest-xdist'], 2022-06-30T13:31:29,153 'extras': ['black', 2022-06-30T13:31:29,154 'flake8', 2022-06-30T13:31:29,154 'hypothesis', 2022-06-30T13:31:29,154 'interrogate', 2022-06-30T13:31:29,155 'isort', 2022-06-30T13:31:29,155 'nbstripout', 2022-06-30T13:31:29,155 'nbval', 2022-06-30T13:31:29,156 'pandoc', 2022-06-30T13:31:29,156 'pre-commit', 2022-06-30T13:31:29,156 'pycodestyle', 2022-06-30T13:31:29,157 'pydocstyle', 2022-06-30T13:31:29,157 'pytest', 2022-06-30T13:31:29,157 'pytest-cov', 2022-06-30T13:31:29,158 'pytest-xdist']} 2022-06-30T13:31:29,158 running bdist_wheel 2022-06-30T13:31:30,385 running build 2022-06-30T13:31:30,386 running build_py 2022-06-30T13:31:31,067 creating build 2022-06-30T13:31:31,067 creating build/lib 2022-06-30T13:31:31,069 creating build/lib/graphein 2022-06-30T13:31:31,071 copying graphein/__init__.py -> build/lib/graphein 2022-06-30T13:31:31,074 copying graphein/_version.py -> build/lib/graphein 2022-06-30T13:31:31,078 copying graphein/cli.py -> build/lib/graphein 2022-06-30T13:31:31,084 creating build/lib/graphein/protein 2022-06-30T13:31:31,085 copying graphein/protein/config.py -> build/lib/graphein/protein 2022-06-30T13:31:31,089 copying graphein/protein/graphs.py -> build/lib/graphein/protein 2022-06-30T13:31:31,095 copying graphein/protein/subgraphs.py -> build/lib/graphein/protein 2022-06-30T13:31:31,100 copying graphein/protein/meshes.py -> build/lib/graphein/protein 2022-06-30T13:31:31,104 copying graphein/protein/__init__.py -> build/lib/graphein/protein 2022-06-30T13:31:31,107 copying graphein/protein/utils.py -> build/lib/graphein/protein 2022-06-30T13:31:31,111 copying graphein/protein/resi_atoms.py -> build/lib/graphein/protein 2022-06-30T13:31:31,117 copying graphein/protein/visualisation.py -> build/lib/graphein/protein 2022-06-30T13:31:31,123 copying graphein/protein/analysis.py -> build/lib/graphein/protein 2022-06-30T13:31:31,129 creating build/lib/graphein/molecule 2022-06-30T13:31:31,131 copying graphein/molecule/config.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,134 copying graphein/molecule/graphs.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,139 copying graphein/molecule/__init__.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,142 copying graphein/molecule/utils.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,147 copying graphein/molecule/atoms.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,151 copying graphein/molecule/chembl.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,154 copying graphein/molecule/visualisation.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,158 copying graphein/molecule/zinc.py -> build/lib/graphein/molecule 2022-06-30T13:31:31,163 creating build/lib/graphein/testing 2022-06-30T13:31:31,165 copying graphein/testing/__init__.py -> build/lib/graphein/testing 2022-06-30T13:31:31,168 copying graphein/testing/utils.py -> build/lib/graphein/testing 2022-06-30T13:31:31,174 creating build/lib/graphein/utils 2022-06-30T13:31:31,175 copying graphein/utils/config.py -> build/lib/graphein/utils 2022-06-30T13:31:31,179 copying graphein/utils/config_parser.py -> build/lib/graphein/utils 2022-06-30T13:31:31,182 copying graphein/utils/__init__.py -> build/lib/graphein/utils 2022-06-30T13:31:31,185 copying graphein/utils/utils.py -> build/lib/graphein/utils 2022-06-30T13:31:31,191 creating build/lib/graphein/ppi 2022-06-30T13:31:31,192 copying graphein/ppi/config.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,196 copying graphein/ppi/graphs.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,200 copying graphein/ppi/edges.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,203 copying graphein/ppi/__init__.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,206 copying graphein/ppi/parse_biogrid.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,210 copying graphein/ppi/graph_metadata.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,213 copying graphein/ppi/parse_stringdb.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,217 copying graphein/ppi/visualisation.py -> build/lib/graphein/ppi 2022-06-30T13:31:31,222 creating build/lib/graphein/ml 2022-06-30T13:31:31,223 copying graphein/ml/__init__.py -> build/lib/graphein/ml 2022-06-30T13:31:31,227 copying graphein/ml/diffusion.py -> build/lib/graphein/ml 2022-06-30T13:31:31,230 copying graphein/ml/utils.py -> build/lib/graphein/ml 2022-06-30T13:31:31,233 copying graphein/ml/conversion.py -> build/lib/graphein/ml 2022-06-30T13:31:31,238 copying graphein/ml/clustering.py -> build/lib/graphein/ml 2022-06-30T13:31:31,243 copying graphein/ml/visualisation.py -> build/lib/graphein/ml 2022-06-30T13:31:31,248 creating build/lib/graphein/grn 2022-06-30T13:31:31,250 copying graphein/grn/config.py -> build/lib/graphein/grn 2022-06-30T13:31:31,253 copying graphein/grn/parse_trrust.py -> build/lib/graphein/grn 2022-06-30T13:31:31,257 copying graphein/grn/graphs.py -> build/lib/graphein/grn 2022-06-30T13:31:31,260 copying graphein/grn/edges.py -> build/lib/graphein/grn 2022-06-30T13:31:31,264 copying graphein/grn/__init__.py -> build/lib/graphein/grn 2022-06-30T13:31:31,266 copying graphein/grn/parse_regnetwork.py -> build/lib/graphein/grn 2022-06-30T13:31:31,272 creating build/lib/graphein/rna 2022-06-30T13:31:31,274 copying graphein/rna/config.py -> build/lib/graphein/rna 2022-06-30T13:31:31,277 copying graphein/rna/nussinov.py -> build/lib/graphein/rna 2022-06-30T13:31:31,281 copying graphein/rna/graphs.py -> build/lib/graphein/rna 2022-06-30T13:31:31,285 copying graphein/rna/subgraphs.py -> build/lib/graphein/rna 2022-06-30T13:31:31,290 copying graphein/rna/__init__.py -> build/lib/graphein/rna 2022-06-30T13:31:31,293 copying graphein/rna/utils.py -> build/lib/graphein/rna 2022-06-30T13:31:31,296 copying graphein/rna/constants.py -> build/lib/graphein/rna 2022-06-30T13:31:31,300 copying graphein/rna/visualisation.py -> build/lib/graphein/rna 2022-06-30T13:31:31,305 creating build/lib/graphein/protein/edges 2022-06-30T13:31:31,306 copying graphein/protein/edges/intramolecular.py -> build/lib/graphein/protein/edges 2022-06-30T13:31:31,311 copying graphein/protein/edges/distance.py -> build/lib/graphein/protein/edges 2022-06-30T13:31:31,316 copying graphein/protein/edges/__init__.py -> build/lib/graphein/protein/edges 2022-06-30T13:31:31,319 copying graphein/protein/edges/atomic.py -> build/lib/graphein/protein/edges 2022-06-30T13:31:31,324 creating build/lib/graphein/protein/features 2022-06-30T13:31:31,326 copying graphein/protein/features/__init__.py -> build/lib/graphein/protein/features 2022-06-30T13:31:31,330 copying graphein/protein/features/utils.py -> build/lib/graphein/protein/features 2022-06-30T13:31:31,334 creating build/lib/graphein/protein/features/graph 2022-06-30T13:31:31,335 copying graphein/protein/features/graph/structure.py -> build/lib/graphein/protein/features/graph 2022-06-30T13:31:31,339 copying graphein/protein/features/graph/__init__.py -> build/lib/graphein/protein/features/graph 2022-06-30T13:31:31,342 copying graphein/protein/features/graph/dynamics.py -> build/lib/graphein/protein/features/graph 2022-06-30T13:31:31,346 creating build/lib/graphein/protein/features/pretrained_models 2022-06-30T13:31:31,347 copying graphein/protein/features/pretrained_models/__init__.py -> build/lib/graphein/protein/features/pretrained_models 2022-06-30T13:31:31,352 creating build/lib/graphein/protein/features/nodes 2022-06-30T13:31:31,353 copying graphein/protein/features/nodes/__init__.py -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:31,357 copying graphein/protein/features/nodes/aaindex.py -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:31,360 copying graphein/protein/features/nodes/amino_acid.py -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:31,364 copying graphein/protein/features/nodes/geometry.py -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:31,368 copying graphein/protein/features/nodes/dssp.py -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:31,373 creating build/lib/graphein/protein/features/sequence 2022-06-30T13:31:31,374 copying graphein/protein/features/sequence/propy.py -> build/lib/graphein/protein/features/sequence 2022-06-30T13:31:31,381 copying graphein/protein/features/sequence/__init__.py -> build/lib/graphein/protein/features/sequence 2022-06-30T13:31:31,384 copying graphein/protein/features/sequence/embeddings.py -> build/lib/graphein/protein/features/sequence 2022-06-30T13:31:31,388 copying graphein/protein/features/sequence/utils.py -> build/lib/graphein/protein/features/sequence 2022-06-30T13:31:31,392 copying graphein/protein/features/sequence/sequence.py -> build/lib/graphein/protein/features/sequence 2022-06-30T13:31:31,396 creating build/lib/graphein/protein/features/data 2022-06-30T13:31:31,397 copying graphein/protein/features/data/__init__.py -> build/lib/graphein/protein/features/data 2022-06-30T13:31:31,401 creating build/lib/graphein/molecule/edges 2022-06-30T13:31:31,403 copying graphein/molecule/edges/distance.py -> build/lib/graphein/molecule/edges 2022-06-30T13:31:31,407 copying graphein/molecule/edges/__init__.py -> build/lib/graphein/molecule/edges 2022-06-30T13:31:31,410 copying graphein/molecule/edges/atomic.py -> build/lib/graphein/molecule/edges 2022-06-30T13:31:31,414 creating build/lib/graphein/molecule/features 2022-06-30T13:31:31,415 copying graphein/molecule/features/__init__.py -> build/lib/graphein/molecule/features 2022-06-30T13:31:31,420 creating build/lib/graphein/molecule/features/graph 2022-06-30T13:31:31,421 copying graphein/molecule/features/graph/molecule.py -> build/lib/graphein/molecule/features/graph 2022-06-30T13:31:31,426 copying graphein/molecule/features/graph/__init__.py -> build/lib/graphein/molecule/features/graph 2022-06-30T13:31:31,431 creating build/lib/graphein/molecule/features/edges 2022-06-30T13:31:31,432 copying graphein/molecule/features/edges/bonds.py -> build/lib/graphein/molecule/features/edges 2022-06-30T13:31:31,436 copying graphein/molecule/features/edges/__init__.py -> build/lib/graphein/molecule/features/edges 2022-06-30T13:31:31,440 creating build/lib/graphein/molecule/features/nodes 2022-06-30T13:31:31,441 copying graphein/molecule/features/nodes/__init__.py -> build/lib/graphein/molecule/features/nodes 2022-06-30T13:31:31,445 copying graphein/molecule/features/nodes/atom_type.py -> build/lib/graphein/molecule/features/nodes 2022-06-30T13:31:31,450 creating build/lib/graphein/utils/pymol 2022-06-30T13:31:31,451 copying graphein/utils/pymol/core.py -> build/lib/graphein/utils/pymol 2022-06-30T13:31:31,455 copying graphein/utils/pymol/__init__.py -> build/lib/graphein/utils/pymol 2022-06-30T13:31:31,458 copying graphein/utils/pymol/compat.py -> build/lib/graphein/utils/pymol 2022-06-30T13:31:31,462 creating build/lib/graphein/ppi/features 2022-06-30T13:31:31,463 copying graphein/ppi/features/__init__.py -> build/lib/graphein/ppi/features 2022-06-30T13:31:31,466 copying graphein/ppi/features/node_features.py -> build/lib/graphein/ppi/features 2022-06-30T13:31:31,470 creating build/lib/graphein/ml/datasets 2022-06-30T13:31:31,471 copying graphein/ml/datasets/torch_geometric_dataset.py -> build/lib/graphein/ml/datasets 2022-06-30T13:31:31,476 copying graphein/ml/datasets/__init__.py -> build/lib/graphein/ml/datasets 2022-06-30T13:31:31,480 creating build/lib/graphein/grn/features 2022-06-30T13:31:31,481 copying graphein/grn/features/__init__.py -> build/lib/graphein/grn/features 2022-06-30T13:31:31,484 copying graphein/grn/features/node_features.py -> build/lib/graphein/grn/features 2022-06-30T13:31:31,488 creating build/lib/graphein/rna/edges 2022-06-30T13:31:31,490 copying graphein/rna/edges/distance.py -> build/lib/graphein/rna/edges 2022-06-30T13:31:31,493 copying graphein/rna/edges/__init__.py -> build/lib/graphein/rna/edges 2022-06-30T13:31:31,496 copying graphein/rna/edges/atomic.py -> build/lib/graphein/rna/edges 2022-06-30T13:31:31,500 copying graphein/rna/edges/base_pairing.py -> build/lib/graphein/rna/edges 2022-06-30T13:31:31,505 creating build/lib/graphein/rna/features 2022-06-30T13:31:31,506 copying graphein/rna/features/__init__.py -> build/lib/graphein/rna/features 2022-06-30T13:31:31,509 copying graphein/rna/features/atom.py -> build/lib/graphein/rna/features 2022-06-30T13:31:31,513 running egg_info 2022-06-30T13:31:32,795 writing graphein.egg-info/PKG-INFO 2022-06-30T13:31:33,392 writing dependency_links to graphein.egg-info/dependency_links.txt 2022-06-30T13:31:35,170 writing entry points to graphein.egg-info/entry_points.txt 2022-06-30T13:31:36,356 writing requirements to graphein.egg-info/requires.txt 2022-06-30T13:31:36,951 writing top-level names to graphein.egg-info/top_level.txt 2022-06-30T13:31:37,056 reading manifest file 'graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:37,108 reading manifest template 'MANIFEST.in' 2022-06-30T13:31:37,219 warning: no files found matching '*include' under directory 'graphein/' 2022-06-30T13:31:37,286 warning: no files found matching 'versioneer.py' under directory 'graphein/' 2022-06-30T13:31:37,288 adding license file 'LICENSE' 2022-06-30T13:31:37,316 writing manifest file 'graphein.egg-info/SOURCES.txt' 2022-06-30T13:31:37,363 creating build/lib/graphein/examples 2022-06-30T13:31:37,364 creating build/lib/graphein/examples/contacts 2022-06-30T13:31:37,366 copying graphein/examples/contacts/3eiy_contacts.tsv -> build/lib/graphein/examples/contacts 2022-06-30T13:31:37,372 copying graphein/examples/contacts/4hhb_contacts.tsv -> build/lib/graphein/examples/contacts 2022-06-30T13:31:37,382 creating build/lib/graphein/examples/pdbs 2022-06-30T13:31:37,383 copying graphein/examples/pdbs/3eiy.pdb -> build/lib/graphein/examples/pdbs 2022-06-30T13:31:37,396 copying graphein/examples/pdbs/4hhb.pdb -> build/lib/graphein/examples/pdbs 2022-06-30T13:31:37,424 copying graphein/protein/features/pretrained_models/swissprot-reviewed-protvec.model -> build/lib/graphein/protein/features/pretrained_models 2022-06-30T13:31:37,808 copying graphein/protein/features/nodes/amino_acid_properties.csv -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:37,813 copying graphein/protein/features/nodes/meiler_embeddings.csv -> build/lib/graphein/protein/features/nodes 2022-06-30T13:31:37,817 copying graphein/utils/pymol/IPYMOL_LICENSE -> build/lib/graphein/utils/pymol 2022-06-30T13:31:39,122 installing to build/bdist.linux-armv7l/wheel 2022-06-30T13:31:39,123 running install 2022-06-30T13:31:39,184 running install_lib 2022-06-30T13:31:39,815 creating build/bdist.linux-armv7l 2022-06-30T13:31:39,816 creating build/bdist.linux-armv7l/wheel 2022-06-30T13:31:39,819 creating build/bdist.linux-armv7l/wheel/graphein 2022-06-30T13:31:39,822 creating build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:39,824 copying build/lib/graphein/protein/config.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:39,830 copying build/lib/graphein/protein/graphs.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:39,836 copying build/lib/graphein/protein/subgraphs.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:39,842 copying build/lib/graphein/protein/meshes.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:39,847 copying build/lib/graphein/protein/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:39,852 creating build/bdist.linux-armv7l/wheel/graphein/protein/edges 2022-06-30T13:31:39,854 copying build/lib/graphein/protein/edges/intramolecular.py -> build/bdist.linux-armv7l/wheel/graphein/protein/edges 2022-06-30T13:31:39,859 copying build/lib/graphein/protein/edges/distance.py -> build/bdist.linux-armv7l/wheel/graphein/protein/edges 2022-06-30T13:31:39,865 copying build/lib/graphein/protein/edges/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/edges 2022-06-30T13:31:39,868 copying build/lib/graphein/protein/edges/atomic.py -> build/bdist.linux-armv7l/wheel/graphein/protein/edges 2022-06-30T13:31:39,874 creating build/bdist.linux-armv7l/wheel/graphein/protein/features 2022-06-30T13:31:39,877 creating build/bdist.linux-armv7l/wheel/graphein/protein/features/graph 2022-06-30T13:31:39,879 copying build/lib/graphein/protein/features/graph/structure.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/graph 2022-06-30T13:31:39,883 copying build/lib/graphein/protein/features/graph/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/graph 2022-06-30T13:31:39,886 copying build/lib/graphein/protein/features/graph/dynamics.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/graph 2022-06-30T13:31:39,891 creating build/bdist.linux-armv7l/wheel/graphein/protein/features/pretrained_models 2022-06-30T13:31:39,893 copying build/lib/graphein/protein/features/pretrained_models/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/pretrained_models 2022-06-30T13:31:39,896 copying build/lib/graphein/protein/features/pretrained_models/swissprot-reviewed-protvec.model -> build/bdist.linux-armv7l/wheel/graphein/protein/features/pretrained_models 2022-06-30T13:31:40,232 copying build/lib/graphein/protein/features/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features 2022-06-30T13:31:40,237 creating build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,240 copying build/lib/graphein/protein/features/nodes/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,244 copying build/lib/graphein/protein/features/nodes/aaindex.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,247 copying build/lib/graphein/protein/features/nodes/meiler_embeddings.csv -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,251 copying build/lib/graphein/protein/features/nodes/amino_acid.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,255 copying build/lib/graphein/protein/features/nodes/amino_acid_properties.csv -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,260 copying build/lib/graphein/protein/features/nodes/geometry.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,265 copying build/lib/graphein/protein/features/nodes/dssp.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/nodes 2022-06-30T13:31:40,269 copying build/lib/graphein/protein/features/utils.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features 2022-06-30T13:31:40,274 creating build/bdist.linux-armv7l/wheel/graphein/protein/features/sequence 2022-06-30T13:31:40,276 copying build/lib/graphein/protein/features/sequence/propy.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/sequence 2022-06-30T13:31:40,283 copying build/lib/graphein/protein/features/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/sequence 2022-06-30T13:31:40,287 copying build/lib/graphein/protein/features/sequence/embeddings.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/sequence 2022-06-30T13:31:40,291 copying build/lib/graphein/protein/features/sequence/utils.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/sequence 2022-06-30T13:31:40,294 copying build/lib/graphein/protein/features/sequence/sequence.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/sequence 2022-06-30T13:31:40,298 creating build/bdist.linux-armv7l/wheel/graphein/protein/features/data 2022-06-30T13:31:40,300 copying build/lib/graphein/protein/features/data/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/protein/features/data 2022-06-30T13:31:40,302 copying build/lib/graphein/protein/utils.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:40,306 copying build/lib/graphein/protein/resi_atoms.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:40,312 copying build/lib/graphein/protein/visualisation.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:40,317 copying build/lib/graphein/protein/analysis.py -> build/bdist.linux-armv7l/wheel/graphein/protein 2022-06-30T13:31:40,322 creating build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,323 copying build/lib/graphein/molecule/config.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,327 copying build/lib/graphein/molecule/graphs.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,331 copying build/lib/graphein/molecule/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,335 creating build/bdist.linux-armv7l/wheel/graphein/molecule/edges 2022-06-30T13:31:40,336 copying build/lib/graphein/molecule/edges/distance.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/edges 2022-06-30T13:31:40,340 copying build/lib/graphein/molecule/edges/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/edges 2022-06-30T13:31:40,343 copying build/lib/graphein/molecule/edges/atomic.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/edges 2022-06-30T13:31:40,347 creating build/bdist.linux-armv7l/wheel/graphein/molecule/features 2022-06-30T13:31:40,350 creating build/bdist.linux-armv7l/wheel/graphein/molecule/features/graph 2022-06-30T13:31:40,351 copying build/lib/graphein/molecule/features/graph/molecule.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features/graph 2022-06-30T13:31:40,355 copying build/lib/graphein/molecule/features/graph/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features/graph 2022-06-30T13:31:40,358 copying build/lib/graphein/molecule/features/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features 2022-06-30T13:31:40,362 creating build/bdist.linux-armv7l/wheel/graphein/molecule/features/edges 2022-06-30T13:31:40,364 copying build/lib/graphein/molecule/features/edges/bonds.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features/edges 2022-06-30T13:31:40,368 copying build/lib/graphein/molecule/features/edges/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features/edges 2022-06-30T13:31:40,372 creating build/bdist.linux-armv7l/wheel/graphein/molecule/features/nodes 2022-06-30T13:31:40,373 copying build/lib/graphein/molecule/features/nodes/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features/nodes 2022-06-30T13:31:40,376 copying build/lib/graphein/molecule/features/nodes/atom_type.py -> build/bdist.linux-armv7l/wheel/graphein/molecule/features/nodes 2022-06-30T13:31:40,381 copying build/lib/graphein/molecule/utils.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,385 copying build/lib/graphein/molecule/atoms.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,388 copying build/lib/graphein/molecule/chembl.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,391 copying build/lib/graphein/molecule/visualisation.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,395 copying build/lib/graphein/molecule/zinc.py -> build/bdist.linux-armv7l/wheel/graphein/molecule 2022-06-30T13:31:40,398 copying build/lib/graphein/__init__.py -> build/bdist.linux-armv7l/wheel/graphein 2022-06-30T13:31:40,402 creating build/bdist.linux-armv7l/wheel/graphein/examples 2022-06-30T13:31:40,404 creating build/bdist.linux-armv7l/wheel/graphein/examples/contacts 2022-06-30T13:31:40,406 copying build/lib/graphein/examples/contacts/4hhb_contacts.tsv -> build/bdist.linux-armv7l/wheel/graphein/examples/contacts 2022-06-30T13:31:40,416 copying build/lib/graphein/examples/contacts/3eiy_contacts.tsv -> build/bdist.linux-armv7l/wheel/graphein/examples/contacts 2022-06-30T13:31:40,424 creating build/bdist.linux-armv7l/wheel/graphein/examples/pdbs 2022-06-30T13:31:40,426 copying build/lib/graphein/examples/pdbs/4hhb.pdb -> build/bdist.linux-armv7l/wheel/graphein/examples/pdbs 2022-06-30T13:31:40,454 copying build/lib/graphein/examples/pdbs/3eiy.pdb -> build/bdist.linux-armv7l/wheel/graphein/examples/pdbs 2022-06-30T13:31:40,468 copying build/lib/graphein/_version.py -> build/bdist.linux-armv7l/wheel/graphein 2022-06-30T13:31:40,474 creating build/bdist.linux-armv7l/wheel/graphein/testing 2022-06-30T13:31:40,475 copying build/lib/graphein/testing/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/testing 2022-06-30T13:31:40,479 copying build/lib/graphein/testing/utils.py -> build/bdist.linux-armv7l/wheel/graphein/testing 2022-06-30T13:31:40,484 creating build/bdist.linux-armv7l/wheel/graphein/utils 2022-06-30T13:31:40,485 copying build/lib/graphein/utils/config.py -> build/bdist.linux-armv7l/wheel/graphein/utils 2022-06-30T13:31:40,488 copying build/lib/graphein/utils/config_parser.py -> build/bdist.linux-armv7l/wheel/graphein/utils 2022-06-30T13:31:40,492 copying build/lib/graphein/utils/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/utils 2022-06-30T13:31:40,496 creating build/bdist.linux-armv7l/wheel/graphein/utils/pymol 2022-06-30T13:31:40,497 copying build/lib/graphein/utils/pymol/core.py -> build/bdist.linux-armv7l/wheel/graphein/utils/pymol 2022-06-30T13:31:40,501 copying build/lib/graphein/utils/pymol/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/utils/pymol 2022-06-30T13:31:40,504 copying build/lib/graphein/utils/pymol/IPYMOL_LICENSE -> build/bdist.linux-armv7l/wheel/graphein/utils/pymol 2022-06-30T13:31:40,507 copying build/lib/graphein/utils/pymol/compat.py -> build/bdist.linux-armv7l/wheel/graphein/utils/pymol 2022-06-30T13:31:40,511 copying build/lib/graphein/utils/utils.py -> build/bdist.linux-armv7l/wheel/graphein/utils 2022-06-30T13:31:40,515 copying build/lib/graphein/cli.py -> build/bdist.linux-armv7l/wheel/graphein 2022-06-30T13:31:40,519 creating build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,521 copying build/lib/graphein/ppi/config.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,525 copying build/lib/graphein/ppi/graphs.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,529 copying build/lib/graphein/ppi/edges.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,532 copying build/lib/graphein/ppi/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,535 copying build/lib/graphein/ppi/parse_biogrid.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,540 creating build/bdist.linux-armv7l/wheel/graphein/ppi/features 2022-06-30T13:31:40,541 copying build/lib/graphein/ppi/features/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/ppi/features 2022-06-30T13:31:40,544 copying build/lib/graphein/ppi/features/node_features.py -> build/bdist.linux-armv7l/wheel/graphein/ppi/features 2022-06-30T13:31:40,547 copying build/lib/graphein/ppi/graph_metadata.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,551 copying build/lib/graphein/ppi/parse_stringdb.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,554 copying build/lib/graphein/ppi/visualisation.py -> build/bdist.linux-armv7l/wheel/graphein/ppi 2022-06-30T13:31:40,560 creating build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,561 copying build/lib/graphein/ml/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,565 copying build/lib/graphein/ml/diffusion.py -> build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,568 copying build/lib/graphein/ml/utils.py -> build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,571 copying build/lib/graphein/ml/conversion.py -> build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,575 copying build/lib/graphein/ml/clustering.py -> build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,581 creating build/bdist.linux-armv7l/wheel/graphein/ml/datasets 2022-06-30T13:31:40,583 copying build/lib/graphein/ml/datasets/torch_geometric_dataset.py -> build/bdist.linux-armv7l/wheel/graphein/ml/datasets 2022-06-30T13:31:40,588 copying build/lib/graphein/ml/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/ml/datasets 2022-06-30T13:31:40,591 copying build/lib/graphein/ml/visualisation.py -> build/bdist.linux-armv7l/wheel/graphein/ml 2022-06-30T13:31:40,596 creating build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,597 copying build/lib/graphein/grn/config.py -> build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,602 copying build/lib/graphein/grn/parse_trrust.py -> build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,605 copying build/lib/graphein/grn/graphs.py -> build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,609 copying build/lib/graphein/grn/edges.py -> build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,613 copying build/lib/graphein/grn/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,615 copying build/lib/graphein/grn/parse_regnetwork.py -> build/bdist.linux-armv7l/wheel/graphein/grn 2022-06-30T13:31:40,620 creating build/bdist.linux-armv7l/wheel/graphein/grn/features 2022-06-30T13:31:40,622 copying build/lib/graphein/grn/features/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/grn/features 2022-06-30T13:31:40,625 copying build/lib/graphein/grn/features/node_features.py -> build/bdist.linux-armv7l/wheel/graphein/grn/features 2022-06-30T13:31:40,629 creating build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,631 copying build/lib/graphein/rna/config.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,634 copying build/lib/graphein/rna/nussinov.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,638 copying build/lib/graphein/rna/graphs.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,642 copying build/lib/graphein/rna/subgraphs.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,647 copying build/lib/graphein/rna/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,651 creating build/bdist.linux-armv7l/wheel/graphein/rna/edges 2022-06-30T13:31:40,653 copying build/lib/graphein/rna/edges/distance.py -> build/bdist.linux-armv7l/wheel/graphein/rna/edges 2022-06-30T13:31:40,656 copying build/lib/graphein/rna/edges/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/rna/edges 2022-06-30T13:31:40,660 copying build/lib/graphein/rna/edges/atomic.py -> build/bdist.linux-armv7l/wheel/graphein/rna/edges 2022-06-30T13:31:40,663 copying build/lib/graphein/rna/edges/base_pairing.py -> build/bdist.linux-armv7l/wheel/graphein/rna/edges 2022-06-30T13:31:40,668 creating build/bdist.linux-armv7l/wheel/graphein/rna/features 2022-06-30T13:31:40,670 copying build/lib/graphein/rna/features/__init__.py -> build/bdist.linux-armv7l/wheel/graphein/rna/features 2022-06-30T13:31:40,673 copying build/lib/graphein/rna/features/atom.py -> build/bdist.linux-armv7l/wheel/graphein/rna/features 2022-06-30T13:31:40,676 copying build/lib/graphein/rna/utils.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,679 copying build/lib/graphein/rna/constants.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,683 copying build/lib/graphein/rna/visualisation.py -> build/bdist.linux-armv7l/wheel/graphein/rna 2022-06-30T13:31:40,686 running install_egg_info 2022-06-30T13:31:41,328 Copying graphein.egg-info to build/bdist.linux-armv7l/wheel/graphein-1.5.0rc1-py3.7.egg-info 2022-06-30T13:31:41,353 running install_scripts 2022-06-30T13:31:41,675 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-06-30T13:31:41,683 creating build/bdist.linux-armv7l/wheel/graphein-1.5.0rc1.dist-info/WHEEL 2022-06-30T13:31:41,687 creating '/tmp/pip-wheel-twihiag0/tmp1kc8hacn/graphein-1.5.0rc1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-06-30T13:31:41,692 adding 'graphein/__init__.py' 2022-06-30T13:31:41,698 adding 'graphein/_version.py' 2022-06-30T13:31:41,701 adding 'graphein/cli.py' 2022-06-30T13:31:41,712 adding 'graphein/examples/contacts/3eiy_contacts.tsv' 2022-06-30T13:31:41,759 adding 'graphein/examples/contacts/4hhb_contacts.tsv' 2022-06-30T13:31:41,829 adding 'graphein/examples/pdbs/3eiy.pdb' 2022-06-30T13:31:42,030 adding 'graphein/examples/pdbs/4hhb.pdb' 2022-06-30T13:31:42,043 adding 'graphein/grn/__init__.py' 2022-06-30T13:31:42,046 adding 'graphein/grn/config.py' 2022-06-30T13:31:42,048 adding 'graphein/grn/edges.py' 2022-06-30T13:31:42,051 adding 'graphein/grn/graphs.py' 2022-06-30T13:31:42,054 adding 'graphein/grn/parse_regnetwork.py' 2022-06-30T13:31:42,057 adding 'graphein/grn/parse_trrust.py' 2022-06-30T13:31:42,060 adding 'graphein/grn/features/__init__.py' 2022-06-30T13:31:42,063 adding 'graphein/grn/features/node_features.py' 2022-06-30T13:31:42,066 adding 'graphein/ml/__init__.py' 2022-06-30T13:31:42,072 adding 'graphein/ml/clustering.py' 2022-06-30T13:31:42,077 adding 'graphein/ml/conversion.py' 2022-06-30T13:31:42,080 adding 'graphein/ml/diffusion.py' 2022-06-30T13:31:42,082 adding 'graphein/ml/utils.py' 2022-06-30T13:31:42,085 adding 'graphein/ml/visualisation.py' 2022-06-30T13:31:42,088 adding 'graphein/ml/datasets/__init__.py' 2022-06-30T13:31:42,093 adding 'graphein/ml/datasets/torch_geometric_dataset.py' 2022-06-30T13:31:42,097 adding 'graphein/molecule/__init__.py' 2022-06-30T13:31:42,101 adding 'graphein/molecule/atoms.py' 2022-06-30T13:31:42,103 adding 'graphein/molecule/chembl.py' 2022-06-30T13:31:42,106 adding 'graphein/molecule/config.py' 2022-06-30T13:31:42,111 adding 'graphein/molecule/graphs.py' 2022-06-30T13:31:42,115 adding 'graphein/molecule/utils.py' 2022-06-30T13:31:42,119 adding 'graphein/molecule/visualisation.py' 2022-06-30T13:31:42,121 adding 'graphein/molecule/zinc.py' 2022-06-30T13:31:42,124 adding 'graphein/molecule/edges/__init__.py' 2022-06-30T13:31:42,127 adding 'graphein/molecule/edges/atomic.py' 2022-06-30T13:31:42,130 adding 'graphein/molecule/edges/distance.py' 2022-06-30T13:31:42,133 adding 'graphein/molecule/features/__init__.py' 2022-06-30T13:31:42,136 adding 'graphein/molecule/features/edges/__init__.py' 2022-06-30T13:31:42,138 adding 'graphein/molecule/features/edges/bonds.py' 2022-06-30T13:31:42,141 adding 'graphein/molecule/features/graph/__init__.py' 2022-06-30T13:31:42,144 adding 'graphein/molecule/features/graph/molecule.py' 2022-06-30T13:31:42,147 adding 'graphein/molecule/features/nodes/__init__.py' 2022-06-30T13:31:42,151 adding 'graphein/molecule/features/nodes/atom_type.py' 2022-06-30T13:31:42,154 adding 'graphein/ppi/__init__.py' 2022-06-30T13:31:42,157 adding 'graphein/ppi/config.py' 2022-06-30T13:31:42,160 adding 'graphein/ppi/edges.py' 2022-06-30T13:31:42,163 adding 'graphein/ppi/graph_metadata.py' 2022-06-30T13:31:42,165 adding 'graphein/ppi/graphs.py' 2022-06-30T13:31:42,169 adding 'graphein/ppi/parse_biogrid.py' 2022-06-30T13:31:42,173 adding 'graphein/ppi/parse_stringdb.py' 2022-06-30T13:31:42,176 adding 'graphein/ppi/visualisation.py' 2022-06-30T13:31:42,180 adding 'graphein/ppi/features/__init__.py' 2022-06-30T13:31:42,182 adding 'graphein/ppi/features/node_features.py' 2022-06-30T13:31:42,186 adding 'graphein/protein/__init__.py' 2022-06-30T13:31:42,189 adding 'graphein/protein/analysis.py' 2022-06-30T13:31:42,193 adding 'graphein/protein/config.py' 2022-06-30T13:31:42,205 adding 'graphein/protein/graphs.py' 2022-06-30T13:31:42,210 adding 'graphein/protein/meshes.py' 2022-06-30T13:31:42,220 adding 'graphein/protein/resi_atoms.py' 2022-06-30T13:31:42,226 adding 'graphein/protein/subgraphs.py' 2022-06-30T13:31:42,231 adding 'graphein/protein/utils.py' 2022-06-30T13:31:42,240 adding 'graphein/protein/visualisation.py' 2022-06-30T13:31:42,244 adding 'graphein/protein/edges/__init__.py' 2022-06-30T13:31:42,249 adding 'graphein/protein/edges/atomic.py' 2022-06-30T13:31:42,257 adding 'graphein/protein/edges/distance.py' 2022-06-30T13:31:42,262 adding 'graphein/protein/edges/intramolecular.py' 2022-06-30T13:31:42,265 adding 'graphein/protein/features/__init__.py' 2022-06-30T13:31:42,267 adding 'graphein/protein/features/utils.py' 2022-06-30T13:31:42,270 adding 'graphein/protein/features/data/__init__.py' 2022-06-30T13:31:42,273 adding 'graphein/protein/features/graph/__init__.py' 2022-06-30T13:31:42,276 adding 'graphein/protein/features/graph/dynamics.py' 2022-06-30T13:31:42,278 adding 'graphein/protein/features/graph/structure.py' 2022-06-30T13:31:42,282 adding 'graphein/protein/features/nodes/__init__.py' 2022-06-30T13:31:42,284 adding 'graphein/protein/features/nodes/aaindex.py' 2022-06-30T13:31:42,287 adding 'graphein/protein/features/nodes/amino_acid.py' 2022-06-30T13:31:42,292 adding 'graphein/protein/features/nodes/amino_acid_properties.csv' 2022-06-30T13:31:42,295 adding 'graphein/protein/features/nodes/dssp.py' 2022-06-30T13:31:42,299 adding 'graphein/protein/features/nodes/geometry.py' 2022-06-30T13:31:42,301 adding 'graphein/protein/features/nodes/meiler_embeddings.csv' 2022-06-30T13:31:42,304 adding 'graphein/protein/features/pretrained_models/__init__.py' 2022-06-30T13:31:45,505 adding 'graphein/protein/features/pretrained_models/swissprot-reviewed-protvec.model' 2022-06-30T13:31:45,674 adding 'graphein/protein/features/sequence/__init__.py' 2022-06-30T13:31:45,678 adding 'graphein/protein/features/sequence/embeddings.py' 2022-06-30T13:31:45,685 adding 'graphein/protein/features/sequence/propy.py' 2022-06-30T13:31:45,689 adding 'graphein/protein/features/sequence/sequence.py' 2022-06-30T13:31:45,692 adding 'graphein/protein/features/sequence/utils.py' 2022-06-30T13:31:45,696 adding 'graphein/rna/__init__.py' 2022-06-30T13:31:45,698 adding 'graphein/rna/config.py' 2022-06-30T13:31:45,701 adding 'graphein/rna/constants.py' 2022-06-30T13:31:45,705 adding 'graphein/rna/graphs.py' 2022-06-30T13:31:45,709 adding 'graphein/rna/nussinov.py' 2022-06-30T13:31:45,712 adding 'graphein/rna/subgraphs.py' 2022-06-30T13:31:45,715 adding 'graphein/rna/utils.py' 2022-06-30T13:31:45,717 adding 'graphein/rna/visualisation.py' 2022-06-30T13:31:45,721 adding 'graphein/rna/edges/__init__.py' 2022-06-30T13:31:45,724 adding 'graphein/rna/edges/atomic.py' 2022-06-30T13:31:45,726 adding 'graphein/rna/edges/base_pairing.py' 2022-06-30T13:31:45,729 adding 'graphein/rna/edges/distance.py' 2022-06-30T13:31:45,732 adding 'graphein/rna/features/__init__.py' 2022-06-30T13:31:45,734 adding 'graphein/rna/features/atom.py' 2022-06-30T13:31:45,737 adding 'graphein/testing/__init__.py' 2022-06-30T13:31:45,740 adding 'graphein/testing/utils.py' 2022-06-30T13:31:45,743 adding 'graphein/utils/__init__.py' 2022-06-30T13:31:45,745 adding 'graphein/utils/config.py' 2022-06-30T13:31:45,748 adding 'graphein/utils/config_parser.py' 2022-06-30T13:31:45,753 adding 'graphein/utils/utils.py' 2022-06-30T13:31:45,756 adding 'graphein/utils/pymol/IPYMOL_LICENSE' 2022-06-30T13:31:45,758 adding 'graphein/utils/pymol/__init__.py' 2022-06-30T13:31:45,760 adding 'graphein/utils/pymol/compat.py' 2022-06-30T13:31:45,763 adding 'graphein/utils/pymol/core.py' 2022-06-30T13:31:45,768 adding 'graphein-1.5.0rc1.dist-info/LICENSE' 2022-06-30T13:31:45,773 adding 'graphein-1.5.0rc1.dist-info/METADATA' 2022-06-30T13:31:45,775 adding 'graphein-1.5.0rc1.dist-info/WHEEL' 2022-06-30T13:31:45,776 adding 'graphein-1.5.0rc1.dist-info/entry_points.txt' 2022-06-30T13:31:45,778 adding 'graphein-1.5.0rc1.dist-info/top_level.txt' 2022-06-30T13:31:45,783 adding 'graphein-1.5.0rc1.dist-info/RECORD' 2022-06-30T13:31:46,013 removing build/bdist.linux-armv7l/wheel 2022-06-30T13:31:46,098 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-30T13:31:46,099 ############################ 2022-06-30T13:31:46,100 # Package would be ignored # 2022-06-30T13:31:46,100 ############################ 2022-06-30T13:31:46,101 Python recognizes 'graphein.examples.contacts' as an importable package, however it is 2022-06-30T13:31:46,101 included in the distribution as "data". 2022-06-30T13:31:46,102 This behavior is likely to change in future versions of setuptools (and 2022-06-30T13:31:46,102 therefore is considered deprecated). 2022-06-30T13:31:46,103 Please make sure that 'graphein.examples.contacts' is included as a package by using 2022-06-30T13:31:46,104 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-30T13:31:46,104 You can read more about "package discovery" and "data files" on setuptools 2022-06-30T13:31:46,105 documentation page. 2022-06-30T13:31:46,106 !! 2022-06-30T13:31:46,107 check.warn(importable) 2022-06-30T13:31:46,108 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-06-30T13:31:46,109 ############################ 2022-06-30T13:31:46,109 # Package would be ignored # 2022-06-30T13:31:46,110 ############################ 2022-06-30T13:31:46,110 Python recognizes 'graphein.examples.pdbs' as an importable package, however it is 2022-06-30T13:31:46,110 included in the distribution as "data". 2022-06-30T13:31:46,111 This behavior is likely to change in future versions of setuptools (and 2022-06-30T13:31:46,111 therefore is considered deprecated). 2022-06-30T13:31:46,112 Please make sure that 'graphein.examples.pdbs' is included as a package by using 2022-06-30T13:31:46,112 setuptools' `packages` configuration field or the proper discovery methods. 2022-06-30T13:31:46,113 You can read more about "package discovery" and "data files" on setuptools 2022-06-30T13:31:46,114 documentation page. 2022-06-30T13:31:46,115 !! 2022-06-30T13:31:46,116 check.warn(importable) 2022-06-30T13:31:46,361 Building wheel for graphein (pyproject.toml): finished with status 'done' 2022-06-30T13:31:46,804 Created wheel for graphein: filename=graphein-1.5.0rc1-py3-none-any.whl size=7695599 sha256=39c065073e4e319423a24c307778355037a6e01fec5105db0d004d9a2aaa4ee7 2022-06-30T13:31:46,806 Stored in directory: /tmp/pip-ephem-wheel-cache-ya_s7js_/wheels/52/84/87/b28b956924c90ec7094bc18a7016c14185b1dacc770cfbf235 2022-06-30T13:31:46,852 Successfully built graphein 2022-06-30T13:31:47,342 Removed build tracker: '/tmp/pip-build-tracker-3um2732q'