2022-07-20T07:14:08,602 Created temporary directory: /tmp/pip-ephem-wheel-cache-o376fd4x
2022-07-20T07:14:08,608 Created temporary directory: /tmp/pip-build-tracker-y_agnynp
2022-07-20T07:14:08,609 Initialized build tracking at /tmp/pip-build-tracker-y_agnynp
2022-07-20T07:14:08,609 Created build tracker: /tmp/pip-build-tracker-y_agnynp
2022-07-20T07:14:08,609 Entered build tracker: /tmp/pip-build-tracker-y_agnynp
2022-07-20T07:14:08,611 Created temporary directory: /tmp/pip-wheel-w7aerx01
2022-07-20T07:14:08,685 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-07-20T07:14:08,693 2 location(s) to search for versions of bioen:
2022-07-20T07:14:08,693 * https://pypi.org/simple/bioen/
2022-07-20T07:14:08,693 * https://www.piwheels.org/simple/bioen/
2022-07-20T07:14:08,694 Fetching project page and analyzing links: https://pypi.org/simple/bioen/
2022-07-20T07:14:08,695 Getting page https://pypi.org/simple/bioen/
2022-07-20T07:14:08,699 Found index url https://pypi.org/simple
2022-07-20T07:14:08,816   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/e8/72/d84e7a1948bb08b25c83c740546027d27b3daa601bc4eb471aed6e6d99c6/bioen-0.1.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=ff53cc30971fef7a6e0b7e3365e78532e51bbfa291db8ef5d4eb99f298670d75 (from https://pypi.org/simple/bioen/)
2022-07-20T07:14:08,816   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/65/24/a8ff33f261d69c5ca8b39f13b31076c1976a995fdb3f443d03672f993258/bioen-0.1.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=29eb29989db35401a9a23194b5b7013ff47424158cd430fb5d23d256916c04ec (from https://pypi.org/simple/bioen/)
2022-07-20T07:14:08,817   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/15/37/7c6d0827cefd20315d03ce77f1c1f70fb28caa993ca3bc4aa3b5b77e4c67/bioen-0.1.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=420071d45e82fc4bee854dc7a9889dbd29bcf43e2873800a72ee67dada8ed4da (from https://pypi.org/simple/bioen/)
2022-07-20T07:14:08,817   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/d4/d6/5e6c5ec45b33ee1174d6442ea65f0bf94af29d6121f1cc1d84242bbd8fde/bioen-0.1.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=1006dc44e50e8ad78cd142d91ee13e03108a80f406c6a90c1ae53b69add71a73 (from https://pypi.org/simple/bioen/)
2022-07-20T07:14:08,818   Found link https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz#sha256=d597387ad07e3b4aca31f23580051b63936863368dcdda1d7777df46eb57fe37 (from https://pypi.org/simple/bioen/), version: 0.1.2
2022-07-20T07:14:08,819 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioen/
2022-07-20T07:14:08,820 Getting page https://www.piwheels.org/simple/bioen/
2022-07-20T07:14:08,822 Found index url https://www.piwheels.org/simple
2022-07-20T07:14:09,036 Skipping link: not a file: https://www.piwheels.org/simple/bioen/
2022-07-20T07:14:09,037 Skipping link: not a file: https://pypi.org/simple/bioen/
2022-07-20T07:14:09,081 Given no hashes to check 1 links for project 'bioen': discarding no candidates
2022-07-20T07:14:09,123 Collecting bioen==0.1.2
2022-07-20T07:14:09,128   Created temporary directory: /tmp/pip-unpack-3mxj6zgd
2022-07-20T07:14:09,221   Downloading bioen-0.1.2.tar.gz (5.8 MB)
2022-07-20T07:14:12,432   Added bioen==0.1.2 from https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz#sha256=d597387ad07e3b4aca31f23580051b63936863368dcdda1d7777df46eb57fe37 to build tracker '/tmp/pip-build-tracker-y_agnynp'
2022-07-20T07:14:12,436   Running setup.py (path:/tmp/pip-wheel-w7aerx01/bioen_a21ff135aa924a57bad76d1aeaa02684/setup.py) egg_info for package bioen
2022-07-20T07:14:12,437   Created temporary directory: /tmp/pip-pip-egg-info-r5rcrzf4
2022-07-20T07:14:12,438   Preparing metadata (setup.py): started
2022-07-20T07:14:12,440   Running command python setup.py egg_info
2022-07-20T07:14:15,645   Traceback (most recent call last):
2022-07-20T07:14:15,646     File "<string>", line 2, in <module>
2022-07-20T07:14:15,647     File "<pip-setuptools-caller>", line 34, in <module>
2022-07-20T07:14:15,647     File "/tmp/pip-wheel-w7aerx01/bioen_a21ff135aa924a57bad76d1aeaa02684/setup.py", line 253, in <module>
2022-07-20T07:14:15,648       reqs = [l.strip() for l in open(BIOEN_REQUIREMENTS_TXT).readlines()]
2022-07-20T07:14:15,649   FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
2022-07-20T07:14:15,649   Warning: liblbfgs is not used!
2022-07-20T07:14:15,650   ---
2022-07-20T07:14:15,650   bioen v0.1.2
2022-07-20T07:14:15,650   BIOEN_OPENMP : False
2022-07-20T07:14:15,651   BIOEN_FAST_CFLAGS : True
2022-07-20T07:14:15,651   CFLAGS : ['-O3', '-fPIC', '-Wno-unknown-pragmas', '-march=native', '-std=gnu99', '-DENABLE_GSL']
2022-07-20T07:14:15,652   LDFLAGS : ['-lm', '-lgsl', '-lgslcblas']
2022-07-20T07:14:15,652   RPATH : True
2022-07-20T07:14:15,653   ---
2022-07-20T07:14:15,890   ERROR: [present-rich] python setup.py egg_info exited with 1
2022-07-20T07:14:15,930   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2022-07-20T07:14:15,930   exec(compile('"'"''"'"''"'"'
2022-07-20T07:14:15,930   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2022-07-20T07:14:15,930   #
2022-07-20T07:14:15,930   # - It imports setuptools before invoking setup.py, to enable projects that directly
2022-07-20T07:14:15,930   #   import from `distutils.core` to work with newer packaging standards.
2022-07-20T07:14:15,930   # - It provides a clear error message when setuptools is not installed.
2022-07-20T07:14:15,930   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2022-07-20T07:14:15,930   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2022-07-20T07:14:15,930   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2022-07-20T07:14:15,930   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2022-07-20T07:14:15,930   import os, sys, tokenize
2022-07-20T07:14:15,930   
2022-07-20T07:14:15,930   try:
2022-07-20T07:14:15,930       import setuptools
2022-07-20T07:14:15,930   except ImportError as error:
2022-07-20T07:14:15,930       print(
2022-07-20T07:14:15,930           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2022-07-20T07:14:15,930           "the build environment.",
2022-07-20T07:14:15,930           file=sys.stderr,
2022-07-20T07:14:15,930       )
2022-07-20T07:14:15,930       sys.exit(1)
2022-07-20T07:14:15,930   
2022-07-20T07:14:15,930   __file__ = %r
2022-07-20T07:14:15,930   sys.argv[0] = __file__
2022-07-20T07:14:15,930   
2022-07-20T07:14:15,930   if os.path.exists(__file__):
2022-07-20T07:14:15,930       filename = __file__
2022-07-20T07:14:15,930       with tokenize.open(__file__) as f:
2022-07-20T07:14:15,930           setup_py_code = f.read()
2022-07-20T07:14:15,930   else:
2022-07-20T07:14:15,930       filename = "<auto-generated setuptools caller>"
2022-07-20T07:14:15,930       setup_py_code = "from setuptools import setup; setup()"
2022-07-20T07:14:15,930   
2022-07-20T07:14:15,930   exec(compile(setup_py_code, filename, "exec"))
2022-07-20T07:14:15,930   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-w7aerx01/bioen_a21ff135aa924a57bad76d1aeaa02684/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-r5rcrzf4[/]
2022-07-20T07:14:15,930   [bold magenta]cwd[/]: /tmp/pip-wheel-w7aerx01/bioen_a21ff135aa924a57bad76d1aeaa02684/
2022-07-20T07:14:15,931   Preparing metadata (setup.py): finished with status 'error'
2022-07-20T07:14:15,934 ERROR: [present-rich] metadata generation failed
2022-07-20T07:14:15,947 Exception information:
2022-07-20T07:14:15,947 Traceback (most recent call last):
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2022-07-20T07:14:15,947     call_subprocess(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2022-07-20T07:14:15,947     raise error
2022-07-20T07:14:15,947 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2022-07-20T07:14:15,947 
2022-07-20T07:14:15,947 The above exception was the direct cause of the following exception:
2022-07-20T07:14:15,947 
2022-07-20T07:14:15,947 Traceback (most recent call last):
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper
2022-07-20T07:14:15,947     status = run_func(*args)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2022-07-20T07:14:15,947     return func(self, options, args)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 145, in run
2022-07-20T07:14:15,947     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 94, in resolve
2022-07-20T07:14:15,947     result = self._result = resolver.resolve(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve
2022-07-20T07:14:15,947     state = resolution.resolve(requirements, max_rounds=max_rounds)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve
2022-07-20T07:14:15,947     self._add_to_criteria(self.state.criteria, r, parent=None)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria
2022-07-20T07:14:15,947     if not criterion.candidates:
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__
2022-07-20T07:14:15,947     return bool(self._sequence)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2022-07-20T07:14:15,947     return any(self)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2022-07-20T07:14:15,947     return (c for c in iterator if id(c) not in self._incompatible_ids)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2022-07-20T07:14:15,947     candidate = func()
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 215, in _make_candidate_from_link
2022-07-20T07:14:15,947     self._link_candidate_cache[link] = LinkCandidate(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 291, in __init__
2022-07-20T07:14:15,947     super().__init__(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 161, in __init__
2022-07-20T07:14:15,947     self.dist = self._prepare()
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 230, in _prepare
2022-07-20T07:14:15,947     dist = self._prepare_distribution()
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 302, in _prepare_distribution
2022-07-20T07:14:15,947     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 428, in prepare_linked_requirement
2022-07-20T07:14:15,947     return self._prepare_linked_requirement(req, parallel_builds)
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 497, in _prepare_linked_requirement
2022-07-20T07:14:15,947     dist = _get_prepared_distribution(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 58, in _get_prepared_distribution
2022-07-20T07:14:15,947     abstract_dist.prepare_distribution_metadata(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2022-07-20T07:14:15,947     self.req.prepare_metadata()
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/req/req_install.py", line 532, in prepare_metadata
2022-07-20T07:14:15,947     self.metadata_directory = generate_metadata_legacy(
2022-07-20T07:14:15,947   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2022-07-20T07:14:15,947     raise MetadataGenerationFailed(package_details=details) from error
2022-07-20T07:14:15,947 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2022-07-20T07:14:15,971 Removed bioen==0.1.2 from https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz#sha256=d597387ad07e3b4aca31f23580051b63936863368dcdda1d7777df46eb57fe37 from build tracker '/tmp/pip-build-tracker-y_agnynp'
2022-07-20T07:14:15,971 Removed build tracker: '/tmp/pip-build-tracker-y_agnynp'