2022-07-27T15:21:50,767 Created temporary directory: /tmp/pip-ephem-wheel-cache-moxs9hn6 2022-07-27T15:21:50,773 Created temporary directory: /tmp/pip-build-tracker-03ld_xbm 2022-07-27T15:21:50,774 Initialized build tracking at /tmp/pip-build-tracker-03ld_xbm 2022-07-27T15:21:50,775 Created build tracker: /tmp/pip-build-tracker-03ld_xbm 2022-07-27T15:21:50,775 Entered build tracker: /tmp/pip-build-tracker-03ld_xbm 2022-07-27T15:21:50,776 Created temporary directory: /tmp/pip-wheel-vnm6_2zo 2022-07-27T15:21:50,840 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-27T15:21:50,849 2 location(s) to search for versions of bioreader: 2022-07-27T15:21:50,849 * https://pypi.org/simple/bioreader/ 2022-07-27T15:21:50,849 * https://www.piwheels.org/simple/bioreader/ 2022-07-27T15:21:50,850 Fetching project page and analyzing links: https://pypi.org/simple/bioreader/ 2022-07-27T15:21:50,851 Getting page https://pypi.org/simple/bioreader/ 2022-07-27T15:21:50,854 Found index url https://pypi.org/simple 2022-07-27T15:21:51,039 Skipping link: No binaries permitted for bioreader: https://files.pythonhosted.org/packages/df/aa/3d254bf28e9e06d9f3976da0d18176149699393e0478aa09925ee7e9b582/bioreader-0.0.1-py2.py3-none-any.whl#sha256=4d0499a9b6089b9de3e795c44ac4dad06fbd36b6657e8b29ef3d658784a6f238 (from https://pypi.org/simple/bioreader/) 2022-07-27T15:21:51,039 Found link https://files.pythonhosted.org/packages/5f/93/e09297637bbf429638151230cab09b04947850c837bf8024056d60660463/bioreader-0.0.1.tar.gz#sha256=b45d0717c32f1ddc4def0f10d68b1649551ac7aa0e36ebd441a61f06e4724cec (from https://pypi.org/simple/bioreader/), version: 0.0.1 2022-07-27T15:21:51,040 Skipping link: No binaries permitted for bioreader: https://files.pythonhosted.org/packages/60/3a/51876c888d0eaed87dee0d8009d56e5fd5c996c511667c321bd19a5ac330/bioreader-0.0.2-py2.py3-none-any.whl#sha256=e5b208973faf3d36c05d24c5a7ddb47457e67b6aa80d3cba202ce3226ddb311b (from https://pypi.org/simple/bioreader/) 2022-07-27T15:21:51,041 Found link https://files.pythonhosted.org/packages/59/67/077ba1b0b1e7eb9b7624d65f9aeeadf48bfc048e2ee17e5c0674bcf2916d/bioreader-0.0.2.tar.gz#sha256=a6fbd8187bd0f7c5db52a5f7e65c0b86594bdca60baffeefcf295e40aee63a22 (from https://pypi.org/simple/bioreader/), version: 0.0.2 2022-07-27T15:21:51,042 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioreader/ 2022-07-27T15:21:51,042 Getting page https://www.piwheels.org/simple/bioreader/ 2022-07-27T15:21:51,044 Found index url https://www.piwheels.org/simple 2022-07-27T15:21:51,253 Skipping link: No binaries permitted for bioreader: https://www.piwheels.org/simple/bioreader/bioreader-0.0.1-py2.py3-none-any.whl#sha256=5edd34b685fc6d8a8640580586091d7804e3d77deeb09e5521d31b0f54668c0f (from https://www.piwheels.org/simple/bioreader/) 2022-07-27T15:21:51,253 Skipping link: not a file: https://www.piwheels.org/simple/bioreader/ 2022-07-27T15:21:51,254 Skipping link: not a file: https://pypi.org/simple/bioreader/ 2022-07-27T15:21:51,287 Given no hashes to check 1 links for project 'bioreader': discarding no candidates 2022-07-27T15:21:51,318 Collecting bioreader==0.0.2 2022-07-27T15:21:51,323 Created temporary directory: /tmp/pip-unpack-bvxkswlt 2022-07-27T15:21:51,546 Downloading bioreader-0.0.2.tar.gz (11 kB) 2022-07-27T15:21:51,670 Added bioreader==0.0.2 from https://files.pythonhosted.org/packages/59/67/077ba1b0b1e7eb9b7624d65f9aeeadf48bfc048e2ee17e5c0674bcf2916d/bioreader-0.0.2.tar.gz#sha256=a6fbd8187bd0f7c5db52a5f7e65c0b86594bdca60baffeefcf295e40aee63a22 to build tracker '/tmp/pip-build-tracker-03ld_xbm' 2022-07-27T15:21:51,680 Created temporary directory: /tmp/pip-build-env-zvrvtnlv 2022-07-27T15:21:51,694 Created temporary directory: /tmp/pip-standalone-pip-fjwm4r5b 2022-07-27T15:21:53,939 Installing build dependencies: started 2022-07-27T15:21:53,941 Running command pip subprocess to install build dependencies 2022-07-27T15:22:03,583 Using pip 22.1.2 from /tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip (python 3.7) 2022-07-27T15:22:05,044 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-27T15:22:05,663 Collecting flit_core<4,>=3.2 2022-07-27T15:22:05,765 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.7.1-py3-none-any.whl (60 kB) 2022-07-27T15:22:10,962 Installing collected packages: flit_core 2022-07-27T15:22:11,608 Successfully installed flit_core-3.7.1 2022-07-27T15:22:11,826 --- Logging error --- 2022-07-27T15:22:11,826 Traceback (most recent call last): 2022-07-27T15:22:11,827 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-07-27T15:22:11,827 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-07-27T15:22:11,827 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-07-27T15:22:11,828 extend(render(renderable, render_options)) 2022-07-27T15:22:11,828 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-07-27T15:22:11,828 for render_output in iter_render: 2022-07-27T15:22:11,829 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-07-27T15:22:11,829 for line in lines: 2022-07-27T15:22:11,829 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-07-27T15:22:11,830 for segment in segments: 2022-07-27T15:22:11,830 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-07-27T15:22:11,830 renderable = rich_cast(renderable) 2022-07-27T15:22:11,831 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-07-27T15:22:11,831 renderable = cast_method() 2022-07-27T15:22:11,831 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-07-27T15:22:11,832 pip_cmd = get_best_invocation_for_this_pip() 2022-07-27T15:22:11,832 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-07-27T15:22:11,832 os.path.join(binary_prefix, exe_name), 2022-07-27T15:22:11,833 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-07-27T15:22:11,833 s2 = os.stat(f2) 2022-07-27T15:22:11,833 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-07-27T15:22:11,833 Call stack: 2022-07-27T15:22:11,834 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-07-27T15:22:11,834 "__main__", mod_spec) 2022-07-27T15:22:11,835 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-07-27T15:22:11,835 exec(code, run_globals) 2022-07-27T15:22:11,835 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/__main__.py", line 31, in 2022-07-27T15:22:11,835 sys.exit(_main()) 2022-07-27T15:22:11,836 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-07-27T15:22:11,836 return command.main(cmd_args) 2022-07-27T15:22:11,836 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-07-27T15:22:11,837 return self._main(args) 2022-07-27T15:22:11,837 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-07-27T15:22:11,837 self.handle_pip_version_check(options) 2022-07-27T15:22:11,838 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-07-27T15:22:11,838 pip_self_version_check(session, options) 2022-07-27T15:22:11,838 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-07-27T15:22:11,839 logger.info("[present-rich] %s", upgrade_prompt) 2022-07-27T15:22:11,839 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-07-27T15:22:11,839 self._log(INFO, msg, args, **kwargs) 2022-07-27T15:22:11,840 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-07-27T15:22:11,840 self.handle(record) 2022-07-27T15:22:11,840 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-07-27T15:22:11,840 self.callHandlers(record) 2022-07-27T15:22:11,841 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-07-27T15:22:11,841 hdlr.handle(record) 2022-07-27T15:22:11,841 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-07-27T15:22:11,842 self.emit(record) 2022-07-27T15:22:11,842 File "/tmp/pip-standalone-pip-fjwm4r5b/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-07-27T15:22:11,842 self.handleError(record) 2022-07-27T15:22:11,843 Message: '[present-rich] %s' 2022-07-27T15:22:11,843 Arguments: (UpgradePrompt(old='22.1.2', new='22.2'),) 2022-07-27T15:22:12,218 Installing build dependencies: finished with status 'done' 2022-07-27T15:22:12,244 Getting requirements to build wheel: started 2022-07-27T15:22:12,246 Running command Getting requirements to build wheel 2022-07-27T15:22:12,912 Getting requirements to build wheel: finished with status 'done' 2022-07-27T15:22:12,922 Created temporary directory: /tmp/pip-modern-metadata-hq551qxo 2022-07-27T15:22:12,928 Preparing metadata (pyproject.toml): started 2022-07-27T15:22:12,930 Running command Preparing metadata (pyproject.toml) 2022-07-27T15:22:13,599 Preparing metadata (pyproject.toml): finished with status 'done' 2022-07-27T15:22:13,614 Source in /tmp/pip-wheel-vnm6_2zo/bioreader_4822381237574961991a43582ffd201e has version 0.0.2, which satisfies requirement bioreader==0.0.2 from https://files.pythonhosted.org/packages/59/67/077ba1b0b1e7eb9b7624d65f9aeeadf48bfc048e2ee17e5c0674bcf2916d/bioreader-0.0.2.tar.gz#sha256=a6fbd8187bd0f7c5db52a5f7e65c0b86594bdca60baffeefcf295e40aee63a22 2022-07-27T15:22:13,616 Removed bioreader==0.0.2 from https://files.pythonhosted.org/packages/59/67/077ba1b0b1e7eb9b7624d65f9aeeadf48bfc048e2ee17e5c0674bcf2916d/bioreader-0.0.2.tar.gz#sha256=a6fbd8187bd0f7c5db52a5f7e65c0b86594bdca60baffeefcf295e40aee63a22 from build tracker '/tmp/pip-build-tracker-03ld_xbm' 2022-07-27T15:22:13,624 Created temporary directory: /tmp/pip-unpack-xa67d8vy 2022-07-27T15:22:13,626 Building wheels for collected packages: bioreader 2022-07-27T15:22:13,635 Created temporary directory: /tmp/pip-wheel-0u4py5k5 2022-07-27T15:22:13,635 Destination directory: /tmp/pip-wheel-0u4py5k5 2022-07-27T15:22:13,640 Building wheel for bioreader (pyproject.toml): started 2022-07-27T15:22:13,642 Running command Building wheel for bioreader (pyproject.toml) 2022-07-27T15:22:14,313 Building wheel for bioreader (pyproject.toml): finished with status 'done' 2022-07-27T15:22:14,324 Created wheel for bioreader: filename=bioreader-0.0.2-py2.py3-none-any.whl size=6761 sha256=dd2c1ff5277d36a23c6dd770013e1f6afd45b978c6310cabf78f6ea7d813c18b 2022-07-27T15:22:14,327 Stored in directory: /tmp/pip-ephem-wheel-cache-moxs9hn6/wheels/1d/a6/70/35d62f770b0ddb0256b24dc5628d04f7852550313e757accfa 2022-07-27T15:22:14,347 Successfully built bioreader 2022-07-27T15:22:14,353 Removed build tracker: '/tmp/pip-build-tracker-03ld_xbm'