2022-07-27T16:08:57,066 Created temporary directory: /tmp/pip-ephem-wheel-cache-8xtpctjk 2022-07-27T16:08:57,072 Created temporary directory: /tmp/pip-build-tracker-4desl4cq 2022-07-27T16:08:57,073 Initialized build tracking at /tmp/pip-build-tracker-4desl4cq 2022-07-27T16:08:57,073 Created build tracker: /tmp/pip-build-tracker-4desl4cq 2022-07-27T16:08:57,073 Entered build tracker: /tmp/pip-build-tracker-4desl4cq 2022-07-27T16:08:57,075 Created temporary directory: /tmp/pip-wheel-zo_0bv_v 2022-07-27T16:08:57,146 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-27T16:08:57,155 2 location(s) to search for versions of bioreader: 2022-07-27T16:08:57,155 * https://pypi.org/simple/bioreader/ 2022-07-27T16:08:57,155 * https://www.piwheels.org/simple/bioreader/ 2022-07-27T16:08:57,156 Fetching project page and analyzing links: https://pypi.org/simple/bioreader/ 2022-07-27T16:08:57,157 Getting page https://pypi.org/simple/bioreader/ 2022-07-27T16:08:57,160 Found index url https://pypi.org/simple 2022-07-27T16:08:57,349 Skipping link: No binaries permitted for bioreader: https://files.pythonhosted.org/packages/df/aa/3d254bf28e9e06d9f3976da0d18176149699393e0478aa09925ee7e9b582/bioreader-0.0.1-py2.py3-none-any.whl#sha256=4d0499a9b6089b9de3e795c44ac4dad06fbd36b6657e8b29ef3d658784a6f238 (from https://pypi.org/simple/bioreader/) 2022-07-27T16:08:57,350 Found link https://files.pythonhosted.org/packages/5f/93/e09297637bbf429638151230cab09b04947850c837bf8024056d60660463/bioreader-0.0.1.tar.gz#sha256=b45d0717c32f1ddc4def0f10d68b1649551ac7aa0e36ebd441a61f06e4724cec (from https://pypi.org/simple/bioreader/), version: 0.0.1 2022-07-27T16:08:57,351 Skipping link: No binaries permitted for bioreader: https://files.pythonhosted.org/packages/60/3a/51876c888d0eaed87dee0d8009d56e5fd5c996c511667c321bd19a5ac330/bioreader-0.0.2-py2.py3-none-any.whl#sha256=e5b208973faf3d36c05d24c5a7ddb47457e67b6aa80d3cba202ce3226ddb311b (from https://pypi.org/simple/bioreader/) 2022-07-27T16:08:57,351 Found link https://files.pythonhosted.org/packages/59/67/077ba1b0b1e7eb9b7624d65f9aeeadf48bfc048e2ee17e5c0674bcf2916d/bioreader-0.0.2.tar.gz#sha256=a6fbd8187bd0f7c5db52a5f7e65c0b86594bdca60baffeefcf295e40aee63a22 (from https://pypi.org/simple/bioreader/), version: 0.0.2 2022-07-27T16:08:57,352 Skipping link: No binaries permitted for bioreader: https://files.pythonhosted.org/packages/01/8b/be8deda8468f1e85bdaa07f7b3911e02dd31cb0141c4c3283d2cef0637ce/bioreader-0.0.3-py2.py3-none-any.whl#sha256=1fe7fb3568770f395372e62cca5075fffd7ef916d00637f65d2be3f31a187d4d (from https://pypi.org/simple/bioreader/) 2022-07-27T16:08:57,352 Found link https://files.pythonhosted.org/packages/db/dc/7150b40b968c42807f1c751897655b34cf0232f39c661cf9c21e85d5a797/bioreader-0.0.3.tar.gz#sha256=3c9fa5b39e020469188767a95fc5c2025b18b5e3edaeb8d7dfe7cb7a120bdbb0 (from https://pypi.org/simple/bioreader/), version: 0.0.3 2022-07-27T16:08:57,353 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioreader/ 2022-07-27T16:08:57,354 Getting page https://www.piwheels.org/simple/bioreader/ 2022-07-27T16:08:57,356 Found index url https://www.piwheels.org/simple 2022-07-27T16:08:57,564 Skipping link: No binaries permitted for bioreader: https://www.piwheels.org/simple/bioreader/bioreader-0.0.2-py2.py3-none-any.whl#sha256=dd2c1ff5277d36a23c6dd770013e1f6afd45b978c6310cabf78f6ea7d813c18b (from https://www.piwheels.org/simple/bioreader/) 2022-07-27T16:08:57,565 Skipping link: No binaries permitted for bioreader: https://www.piwheels.org/simple/bioreader/bioreader-0.0.1-py2.py3-none-any.whl#sha256=5edd34b685fc6d8a8640580586091d7804e3d77deeb09e5521d31b0f54668c0f (from https://www.piwheels.org/simple/bioreader/) 2022-07-27T16:08:57,565 Skipping link: not a file: https://www.piwheels.org/simple/bioreader/ 2022-07-27T16:08:57,566 Skipping link: not a file: https://pypi.org/simple/bioreader/ 2022-07-27T16:08:57,600 Given no hashes to check 1 links for project 'bioreader': discarding no candidates 2022-07-27T16:08:57,631 Collecting bioreader==0.0.3 2022-07-27T16:08:57,635 Created temporary directory: /tmp/pip-unpack-y2vap4d7 2022-07-27T16:08:58,260 Downloading bioreader-0.0.3.tar.gz (11 kB) 2022-07-27T16:08:58,389 Added bioreader==0.0.3 from https://files.pythonhosted.org/packages/db/dc/7150b40b968c42807f1c751897655b34cf0232f39c661cf9c21e85d5a797/bioreader-0.0.3.tar.gz#sha256=3c9fa5b39e020469188767a95fc5c2025b18b5e3edaeb8d7dfe7cb7a120bdbb0 to build tracker '/tmp/pip-build-tracker-4desl4cq' 2022-07-27T16:08:58,399 Created temporary directory: /tmp/pip-build-env-wwf4f4nx 2022-07-27T16:08:58,414 Created temporary directory: /tmp/pip-standalone-pip-ek7ocqy8 2022-07-27T16:09:00,727 Installing build dependencies: started 2022-07-27T16:09:00,729 Running command pip subprocess to install build dependencies 2022-07-27T16:09:10,346 Using pip 22.1.2 from /tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip (python 3.7) 2022-07-27T16:09:11,841 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-27T16:09:12,478 Collecting flit_core<4,>=3.2 2022-07-27T16:09:12,516 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.7.1-py3-none-any.whl (60 kB) 2022-07-27T16:09:17,879 Installing collected packages: flit_core 2022-07-27T16:09:18,518 Successfully installed flit_core-3.7.1 2022-07-27T16:09:18,749 --- Logging error --- 2022-07-27T16:09:18,749 Traceback (most recent call last): 2022-07-27T16:09:18,750 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-07-27T16:09:18,750 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-07-27T16:09:18,751 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-07-27T16:09:18,751 extend(render(renderable, render_options)) 2022-07-27T16:09:18,751 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-07-27T16:09:18,751 for render_output in iter_render: 2022-07-27T16:09:18,752 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-07-27T16:09:18,752 for line in lines: 2022-07-27T16:09:18,752 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-07-27T16:09:18,753 for segment in segments: 2022-07-27T16:09:18,753 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-07-27T16:09:18,753 renderable = rich_cast(renderable) 2022-07-27T16:09:18,754 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-07-27T16:09:18,754 renderable = cast_method() 2022-07-27T16:09:18,754 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-07-27T16:09:18,755 pip_cmd = get_best_invocation_for_this_pip() 2022-07-27T16:09:18,755 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-07-27T16:09:18,755 os.path.join(binary_prefix, exe_name), 2022-07-27T16:09:18,756 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-07-27T16:09:18,756 s2 = os.stat(f2) 2022-07-27T16:09:18,756 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-07-27T16:09:18,757 Call stack: 2022-07-27T16:09:18,757 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-07-27T16:09:18,757 "__main__", mod_spec) 2022-07-27T16:09:18,757 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-07-27T16:09:18,758 exec(code, run_globals) 2022-07-27T16:09:18,758 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/__main__.py", line 31, in 2022-07-27T16:09:18,758 sys.exit(_main()) 2022-07-27T16:09:18,759 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-07-27T16:09:18,759 return command.main(cmd_args) 2022-07-27T16:09:18,759 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-07-27T16:09:18,760 return self._main(args) 2022-07-27T16:09:18,760 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-07-27T16:09:18,760 self.handle_pip_version_check(options) 2022-07-27T16:09:18,761 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-07-27T16:09:18,761 pip_self_version_check(session, options) 2022-07-27T16:09:18,761 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-07-27T16:09:18,761 logger.info("[present-rich] %s", upgrade_prompt) 2022-07-27T16:09:18,762 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-07-27T16:09:18,762 self._log(INFO, msg, args, **kwargs) 2022-07-27T16:09:18,762 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-07-27T16:09:18,763 self.handle(record) 2022-07-27T16:09:18,763 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-07-27T16:09:18,763 self.callHandlers(record) 2022-07-27T16:09:18,764 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-07-27T16:09:18,764 hdlr.handle(record) 2022-07-27T16:09:18,764 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-07-27T16:09:18,765 self.emit(record) 2022-07-27T16:09:18,765 File "/tmp/pip-standalone-pip-ek7ocqy8/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-07-27T16:09:18,765 self.handleError(record) 2022-07-27T16:09:18,765 Message: '[present-rich] %s' 2022-07-27T16:09:18,766 Arguments: (UpgradePrompt(old='22.1.2', new='22.2'),) 2022-07-27T16:09:19,140 Installing build dependencies: finished with status 'done' 2022-07-27T16:09:19,168 Getting requirements to build wheel: started 2022-07-27T16:09:19,170 Running command Getting requirements to build wheel 2022-07-27T16:09:19,851 Getting requirements to build wheel: finished with status 'done' 2022-07-27T16:09:19,862 Created temporary directory: /tmp/pip-modern-metadata-_t3tkbxj 2022-07-27T16:09:19,868 Preparing metadata (pyproject.toml): started 2022-07-27T16:09:19,870 Running command Preparing metadata (pyproject.toml) 2022-07-27T16:09:20,541 Preparing metadata (pyproject.toml): finished with status 'done' 2022-07-27T16:09:20,556 Source in /tmp/pip-wheel-zo_0bv_v/bioreader_77889dd39d6b41769244693fd2e9cab5 has version 0.0.3, which satisfies requirement bioreader==0.0.3 from https://files.pythonhosted.org/packages/db/dc/7150b40b968c42807f1c751897655b34cf0232f39c661cf9c21e85d5a797/bioreader-0.0.3.tar.gz#sha256=3c9fa5b39e020469188767a95fc5c2025b18b5e3edaeb8d7dfe7cb7a120bdbb0 2022-07-27T16:09:20,558 Removed bioreader==0.0.3 from https://files.pythonhosted.org/packages/db/dc/7150b40b968c42807f1c751897655b34cf0232f39c661cf9c21e85d5a797/bioreader-0.0.3.tar.gz#sha256=3c9fa5b39e020469188767a95fc5c2025b18b5e3edaeb8d7dfe7cb7a120bdbb0 from build tracker '/tmp/pip-build-tracker-4desl4cq' 2022-07-27T16:09:20,567 Created temporary directory: /tmp/pip-unpack-0f6wetsp 2022-07-27T16:09:20,568 Building wheels for collected packages: bioreader 2022-07-27T16:09:20,578 Created temporary directory: /tmp/pip-wheel-nh5bzyjj 2022-07-27T16:09:20,579 Destination directory: /tmp/pip-wheel-nh5bzyjj 2022-07-27T16:09:20,584 Building wheel for bioreader (pyproject.toml): started 2022-07-27T16:09:20,586 Running command Building wheel for bioreader (pyproject.toml) 2022-07-27T16:09:21,260 Building wheel for bioreader (pyproject.toml): finished with status 'done' 2022-07-27T16:09:21,273 Created wheel for bioreader: filename=bioreader-0.0.3-py2.py3-none-any.whl size=6805 sha256=d1606e7f13fb307922dd3a162d5bd875b18f43d105d3b245984bf94ef0ddf22c 2022-07-27T16:09:21,275 Stored in directory: /tmp/pip-ephem-wheel-cache-8xtpctjk/wheels/36/50/d9/83d4fe60accf4f96adc1ef2d2ce4efa795b5b4d5d423496c7e 2022-07-27T16:09:21,296 Successfully built bioreader 2022-07-27T16:09:21,303 Removed build tracker: '/tmp/pip-build-tracker-4desl4cq'