2022-07-29T19:43:03,296 Created temporary directory: /tmp/pip-ephem-wheel-cache-sec365e5 2022-07-29T19:43:03,301 Created temporary directory: /tmp/pip-build-tracker-3bjtv9ax 2022-07-29T19:43:03,302 Initialized build tracking at /tmp/pip-build-tracker-3bjtv9ax 2022-07-29T19:43:03,302 Created build tracker: /tmp/pip-build-tracker-3bjtv9ax 2022-07-29T19:43:03,303 Entered build tracker: /tmp/pip-build-tracker-3bjtv9ax 2022-07-29T19:43:03,304 Created temporary directory: /tmp/pip-wheel-_3t07soc 2022-07-29T19:43:03,367 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-29T19:43:03,375 2 location(s) to search for versions of bioontologies: 2022-07-29T19:43:03,375 * https://pypi.org/simple/bioontologies/ 2022-07-29T19:43:03,375 * https://www.piwheels.org/simple/bioontologies/ 2022-07-29T19:43:03,377 Fetching project page and analyzing links: https://pypi.org/simple/bioontologies/ 2022-07-29T19:43:03,378 Getting page https://pypi.org/simple/bioontologies/ 2022-07-29T19:43:03,381 Found index url https://pypi.org/simple 2022-07-29T19:43:03,570 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/02/70/0e872793ea49436026685bb3d51079af3947bb9a699e4ed5ff9550c83310/bioontologies-0.0.1-py3-none-any.whl#sha256=5072a0b9840de2b223ab07d7e645bbbb6df545a6248b1e9056144b47ebb0af2b (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,572 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e8/9d/8acb7f9144335763c181e32d20062cc121aa2faf6c7d00a44b57533cb766/bioontologies-0.0.1.tar.gz#sha256=8d638acb2eea4506dc531708b9f614d82db8c0b7964d81eff067e56bcf62557d (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,573 Skipping link: 0.0.1 Requires-Python >=3.8: https://files.pythonhosted.org/packages/e8/9d/8acb7f9144335763c181e32d20062cc121aa2faf6c7d00a44b57533cb766/bioontologies-0.0.1.tar.gz#sha256=8d638acb2eea4506dc531708b9f614d82db8c0b7964d81eff067e56bcf62557d (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,573 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/09/50/0e253b578e62eafa162c52627a5f737f83403f62253ce52f40415b75e7c8/bioontologies-0.0.2-py3-none-any.whl#sha256=4c7fa23f0c793d908ada4b66c2d055a55e66ce8b0e252ce8746c8eb4da1e038b (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,575 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/26/5e/66b7a336501576cd1abdec05eeba85455bf8dff4f57f4e7f0f51a1815b31/bioontologies-0.0.2.tar.gz#sha256=6479e9c4e629b0e130430ab8560384241929862a1af5ade721fbbe7762a8e7c2 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,575 Skipping link: 0.0.2 Requires-Python >=3.8: https://files.pythonhosted.org/packages/26/5e/66b7a336501576cd1abdec05eeba85455bf8dff4f57f4e7f0f51a1815b31/bioontologies-0.0.2.tar.gz#sha256=6479e9c4e629b0e130430ab8560384241929862a1af5ade721fbbe7762a8e7c2 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,576 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/f1/b4/e8645504342369e0d6600f6273507f8d629bd36445925f1efd76bd7ce189/bioontologies-0.0.3-py3-none-any.whl#sha256=e465dbce0f51014e7cb09b588d14d3b700b3899490a5ca47f0de776a1671fb66 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,577 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/89/18/7aef50c5fe0330315d874bad225d0c826e68d2a2a2fbaa749ebe025bd42a/bioontologies-0.0.3.tar.gz#sha256=c6c0eb605e5cf162a190ef2f0c8960384184bcc07730a6af048aff825615414c (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,578 Skipping link: 0.0.3 Requires-Python >=3.8: https://files.pythonhosted.org/packages/89/18/7aef50c5fe0330315d874bad225d0c826e68d2a2a2fbaa749ebe025bd42a/bioontologies-0.0.3.tar.gz#sha256=c6c0eb605e5cf162a190ef2f0c8960384184bcc07730a6af048aff825615414c (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,578 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/30/2c/9522cb9b1ce05156b116dce08c4488079059c73e42b26865503b130d83fd/bioontologies-0.0.4-py3-none-any.whl#sha256=320bfc75260a33895e9559fc573a5946281dbec93ed26d1d54c6398864607133 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,580 Found link https://files.pythonhosted.org/packages/7c/3b/7adedad217cbcf5fd1a182023db493943b7b07e38971e8a30b3c84802758/bioontologies-0.0.4.tar.gz#sha256=a624ee76a9712ccde10795091b3a583ee82194abaf3e589fe92701da3004b177 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.0.4 2022-07-29T19:43:03,580 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/b4/fa/d769f824f33305b01902985e08d42c22ede00839e1b7c59db3d3943c62ec/bioontologies-0.0.5-py3-none-any.whl#sha256=6d540f193226dfb47da940bd713f852c125d77312bc26109ad05d8c4f0218f71 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,582 Found link https://files.pythonhosted.org/packages/0d/f5/902b5d8471b8b9ae9491b07619159e365ab8bbd509c604a445a8d9e47433/bioontologies-0.0.5.tar.gz#sha256=21ddd45d8457027c9ba309952e401792b1ffc8bc3fb10c8c7dbe3b3f963716fe (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.0.5 2022-07-29T19:43:03,582 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/e6/d9/75a47d8460fac7bf8cadfd62fa5fb868214a3fadc91cdf83b75ca7b08f7f/bioontologies-0.1.0-py3-none-any.whl#sha256=1133d637760bdc2e624a82fa1c9fc2863e8abb275b991cd8ba3bc4c25864335c (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,584 Found link https://files.pythonhosted.org/packages/3a/61/e3a5584bec3fa16118f3834905aacd6d38984029c69459e47f7fdbbb6c7c/bioontologies-0.1.0.tar.gz#sha256=a351338096b34545eb0fab9bcc88ea12615696640f158441e8f919037812043a (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.1.0 2022-07-29T19:43:03,584 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/e4/f5/c66135d5f4737c398395950cfdeaa6793af6474308714bc3984c82feaf86/bioontologies-0.1.1-py3-none-any.whl#sha256=5371ac6455629fad3b76ab1aaac9d36036dd62e460a8c219ff85adefdd8e31a2 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,586 Found link https://files.pythonhosted.org/packages/48/59/a9863e733647722d56d58472671f91dc2f08ed5bbb028029fea6f5bd737c/bioontologies-0.1.1.tar.gz#sha256=d9e0d705e6282d5d3d15ad6f85aac85588b56a5814d8ab6787cf816e97cc2c13 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.1.1 2022-07-29T19:43:03,587 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioontologies/ 2022-07-29T19:43:03,587 Getting page https://www.piwheels.org/simple/bioontologies/ 2022-07-29T19:43:03,590 Found index url https://www.piwheels.org/simple 2022-07-29T19:43:03,812 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.1.0-py3-none-any.whl#sha256=6b2521788855b76e2f16e3ec55bcbe578508c5e860badaa6f5fb3ae85a665648 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,812 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.5-py3-none-any.whl#sha256=d3bf993999fa7233d2cc31a0fb44bcb35b3d96c91c4e658a2ee1df703edc990f (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,813 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.4-py3-none-any.whl#sha256=66bef33f75863d0e93f29b8a0dc2aadbbd63ce22ad7154c1d2a7f418ef5f5d4c (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-07-29T19:43:03,814 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.3-py3-none-any.whl#sha256=b5867e31daa04edec6c19aefe40d2fb800c6dc6e3efeeb648ff9705976b5ff3e (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,814 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.2-py3-none-any.whl#sha256=15a6029a370c2eb76d9c80ab6a4a61f34d97c2336cc3cde43a7d9d33a60a4328 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,815 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.1-py3-none-any.whl#sha256=451449226ac2c5784b10d63cdb52cea7fcc466897d1cc58bc103c14aa3f3234c (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.8) 2022-07-29T19:43:03,815 Skipping link: not a file: https://www.piwheels.org/simple/bioontologies/ 2022-07-29T19:43:03,816 Skipping link: not a file: https://pypi.org/simple/bioontologies/ 2022-07-29T19:43:03,850 Given no hashes to check 1 links for project 'bioontologies': discarding no candidates 2022-07-29T19:43:03,880 Collecting bioontologies==0.1.1 2022-07-29T19:43:03,885 Created temporary directory: /tmp/pip-unpack-xh95b02k 2022-07-29T19:43:04,115 Downloading bioontologies-0.1.1.tar.gz (19 kB) 2022-07-29T19:43:04,254 Added bioontologies==0.1.1 from https://files.pythonhosted.org/packages/48/59/a9863e733647722d56d58472671f91dc2f08ed5bbb028029fea6f5bd737c/bioontologies-0.1.1.tar.gz#sha256=d9e0d705e6282d5d3d15ad6f85aac85588b56a5814d8ab6787cf816e97cc2c13 to build tracker '/tmp/pip-build-tracker-3bjtv9ax' 2022-07-29T19:43:04,267 Created temporary directory: /tmp/pip-build-env-4xiaiyx5 2022-07-29T19:43:04,281 Created temporary directory: /tmp/pip-standalone-pip-ryp8yyb_ 2022-07-29T19:43:06,416 Installing build dependencies: started 2022-07-29T19:43:06,418 Running command pip subprocess to install build dependencies 2022-07-29T19:43:16,512 Using pip 22.1.2 from /tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip (python 3.7) 2022-07-29T19:43:17,999 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-29T19:43:22,249 Collecting setuptools 2022-07-29T19:43:22,737 Using cached https://www.piwheels.org/simple/setuptools/setuptools-63.2.0-py3-none-any.whl (1.2 MB) 2022-07-29T19:43:23,475 Collecting wheel 2022-07-29T19:43:23,509 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-07-29T19:43:29,377 Installing collected packages: wheel, setuptools 2022-07-29T19:43:29,655 Creating /tmp/pip-build-env-4xiaiyx5/overlay/bin 2022-07-29T19:43:29,660 changing mode of /tmp/pip-build-env-4xiaiyx5/overlay/bin/wheel to 755 2022-07-29T19:43:34,593 Successfully installed setuptools-63.2.0 wheel-0.37.1 2022-07-29T19:43:34,820 --- Logging error --- 2022-07-29T19:43:34,821 Traceback (most recent call last): 2022-07-29T19:43:34,821 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-07-29T19:43:34,821 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-07-29T19:43:34,822 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-07-29T19:43:34,822 extend(render(renderable, render_options)) 2022-07-29T19:43:34,822 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-07-29T19:43:34,823 for render_output in iter_render: 2022-07-29T19:43:34,823 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-07-29T19:43:34,823 for line in lines: 2022-07-29T19:43:34,824 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-07-29T19:43:34,824 for segment in segments: 2022-07-29T19:43:34,825 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-07-29T19:43:34,825 renderable = rich_cast(renderable) 2022-07-29T19:43:34,825 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-07-29T19:43:34,826 renderable = cast_method() 2022-07-29T19:43:34,826 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-07-29T19:43:34,826 pip_cmd = get_best_invocation_for_this_pip() 2022-07-29T19:43:34,826 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-07-29T19:43:34,827 os.path.join(binary_prefix, exe_name), 2022-07-29T19:43:34,827 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-07-29T19:43:34,827 s2 = os.stat(f2) 2022-07-29T19:43:34,828 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-07-29T19:43:34,828 Call stack: 2022-07-29T19:43:34,828 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-07-29T19:43:34,829 "__main__", mod_spec) 2022-07-29T19:43:34,829 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-07-29T19:43:34,829 exec(code, run_globals) 2022-07-29T19:43:34,830 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/__main__.py", line 31, in 2022-07-29T19:43:34,830 sys.exit(_main()) 2022-07-29T19:43:34,830 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-07-29T19:43:34,831 return command.main(cmd_args) 2022-07-29T19:43:34,831 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-07-29T19:43:34,831 return self._main(args) 2022-07-29T19:43:34,832 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-07-29T19:43:34,832 self.handle_pip_version_check(options) 2022-07-29T19:43:34,832 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-07-29T19:43:34,832 pip_self_version_check(session, options) 2022-07-29T19:43:34,833 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-07-29T19:43:34,833 logger.info("[present-rich] %s", upgrade_prompt) 2022-07-29T19:43:34,833 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-07-29T19:43:34,834 self._log(INFO, msg, args, **kwargs) 2022-07-29T19:43:34,834 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-07-29T19:43:34,834 self.handle(record) 2022-07-29T19:43:34,835 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-07-29T19:43:34,835 self.callHandlers(record) 2022-07-29T19:43:34,835 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-07-29T19:43:34,836 hdlr.handle(record) 2022-07-29T19:43:34,836 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-07-29T19:43:34,836 self.emit(record) 2022-07-29T19:43:34,837 File "/tmp/pip-standalone-pip-ryp8yyb_/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-07-29T19:43:34,837 self.handleError(record) 2022-07-29T19:43:34,837 Message: '[present-rich] %s' 2022-07-29T19:43:34,838 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.1'),) 2022-07-29T19:43:35,267 Installing build dependencies: finished with status 'done' 2022-07-29T19:43:35,295 Getting requirements to build wheel: started 2022-07-29T19:43:35,297 Running command Getting requirements to build wheel 2022-07-29T19:43:40,282 running egg_info 2022-07-29T19:43:40,910 writing src/bioontologies.egg-info/PKG-INFO 2022-07-29T19:43:41,502 writing dependency_links to src/bioontologies.egg-info/dependency_links.txt 2022-07-29T19:43:43,272 writing entry points to src/bioontologies.egg-info/entry_points.txt 2022-07-29T19:43:44,453 writing requirements to src/bioontologies.egg-info/requires.txt 2022-07-29T19:43:45,047 writing top-level names to src/bioontologies.egg-info/top_level.txt 2022-07-29T19:43:45,772 reading manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:43:45,780 reading manifest template 'MANIFEST.in' 2022-07-29T19:43:45,787 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-07-29T19:43:45,788 warnings.warn(msg, warning_class) 2022-07-29T19:43:45,788 no previously-included directories found matching 'scripts' 2022-07-29T19:43:45,789 no previously-included directories found matching 'notebooks' 2022-07-29T19:43:45,790 no previously-included directories found matching 'tests/.pytest_cache' 2022-07-29T19:43:45,807 warning: no files found matching '*.png' under directory 'docs/source' 2022-07-29T19:43:45,809 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-07-29T19:43:45,810 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-07-29T19:43:45,811 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-07-29T19:43:45,813 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-07-29T19:43:45,814 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2022-07-29T19:43:45,815 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2022-07-29T19:43:45,817 warning: no previously-included files found matching 'tox.ini' 2022-07-29T19:43:45,817 warning: no previously-included files found matching '.flake8' 2022-07-29T19:43:45,818 warning: no previously-included files found matching '.bumpversion.cfg' 2022-07-29T19:43:45,819 warning: no previously-included files found matching '.readthedocs.yml' 2022-07-29T19:43:45,819 adding license file 'LICENSE' 2022-07-29T19:43:45,826 writing manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:43:46,045 Getting requirements to build wheel: finished with status 'done' 2022-07-29T19:43:46,065 Created temporary directory: /tmp/pip-modern-metadata-yy9ef8si 2022-07-29T19:43:46,071 Preparing metadata (pyproject.toml): started 2022-07-29T19:43:46,073 Running command Preparing metadata (pyproject.toml) 2022-07-29T19:43:50,799 running dist_info 2022-07-29T19:43:51,463 creating /tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info 2022-07-29T19:43:52,093 writing /tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/PKG-INFO 2022-07-29T19:43:52,695 writing dependency_links to /tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/dependency_links.txt 2022-07-29T19:43:54,486 writing entry points to /tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/entry_points.txt 2022-07-29T19:43:55,682 writing requirements to /tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/requires.txt 2022-07-29T19:43:56,283 writing top-level names to /tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/top_level.txt 2022-07-29T19:43:56,286 writing manifest file '/tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:43:57,003 reading manifest file '/tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:43:57,007 reading manifest template 'MANIFEST.in' 2022-07-29T19:43:57,015 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-07-29T19:43:57,016 warnings.warn(msg, warning_class) 2022-07-29T19:43:57,016 no previously-included directories found matching 'scripts' 2022-07-29T19:43:57,016 no previously-included directories found matching 'notebooks' 2022-07-29T19:43:57,017 no previously-included directories found matching 'tests/.pytest_cache' 2022-07-29T19:43:57,033 warning: no files found matching '*.png' under directory 'docs/source' 2022-07-29T19:43:57,035 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-07-29T19:43:57,036 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-07-29T19:43:57,037 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-07-29T19:43:57,038 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-07-29T19:43:57,039 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2022-07-29T19:43:57,040 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2022-07-29T19:43:57,042 warning: no previously-included files found matching 'tox.ini' 2022-07-29T19:43:57,042 warning: no previously-included files found matching '.flake8' 2022-07-29T19:43:57,043 warning: no previously-included files found matching '.bumpversion.cfg' 2022-07-29T19:43:57,044 warning: no previously-included files found matching '.readthedocs.yml' 2022-07-29T19:43:57,044 adding license file 'LICENSE' 2022-07-29T19:43:57,050 writing manifest file '/tmp/pip-modern-metadata-yy9ef8si/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:43:57,053 creating '/tmp/pip-modern-metadata-yy9ef8si/bioontologies-0.1.1.dist-info' 2022-07-29T19:43:57,524 Preparing metadata (pyproject.toml): finished with status 'done' 2022-07-29T19:43:57,540 Source in /tmp/pip-wheel-_3t07soc/bioontologies_4012c4a7f4b84d7cb35805457d9b53ca has version 0.1.1, which satisfies requirement bioontologies==0.1.1 from https://files.pythonhosted.org/packages/48/59/a9863e733647722d56d58472671f91dc2f08ed5bbb028029fea6f5bd737c/bioontologies-0.1.1.tar.gz#sha256=d9e0d705e6282d5d3d15ad6f85aac85588b56a5814d8ab6787cf816e97cc2c13 2022-07-29T19:43:57,543 Removed bioontologies==0.1.1 from https://files.pythonhosted.org/packages/48/59/a9863e733647722d56d58472671f91dc2f08ed5bbb028029fea6f5bd737c/bioontologies-0.1.1.tar.gz#sha256=d9e0d705e6282d5d3d15ad6f85aac85588b56a5814d8ab6787cf816e97cc2c13 from build tracker '/tmp/pip-build-tracker-3bjtv9ax' 2022-07-29T19:43:57,558 Created temporary directory: /tmp/pip-unpack-sx528oa6 2022-07-29T19:43:57,559 Building wheels for collected packages: bioontologies 2022-07-29T19:43:57,568 Created temporary directory: /tmp/pip-wheel-3q76v37u 2022-07-29T19:43:57,569 Destination directory: /tmp/pip-wheel-3q76v37u 2022-07-29T19:43:57,574 Building wheel for bioontologies (pyproject.toml): started 2022-07-29T19:43:57,576 Running command Building wheel for bioontologies (pyproject.toml) 2022-07-29T19:44:01,689 running bdist_wheel 2022-07-29T19:44:02,909 running build 2022-07-29T19:44:02,910 running build_py 2022-07-29T19:44:03,535 creating build 2022-07-29T19:44:03,536 creating build/lib 2022-07-29T19:44:03,537 creating build/lib/bioontologies 2022-07-29T19:44:03,539 copying src/bioontologies/__init__.py -> build/lib/bioontologies 2022-07-29T19:44:03,543 copying src/bioontologies/obograph.py -> build/lib/bioontologies 2022-07-29T19:44:03,547 copying src/bioontologies/robot.py -> build/lib/bioontologies 2022-07-29T19:44:03,551 copying src/bioontologies/version.py -> build/lib/bioontologies 2022-07-29T19:44:03,554 copying src/bioontologies/cli.py -> build/lib/bioontologies 2022-07-29T19:44:03,558 copying src/bioontologies/__main__.py -> build/lib/bioontologies 2022-07-29T19:44:03,560 running egg_info 2022-07-29T19:44:04,823 writing src/bioontologies.egg-info/PKG-INFO 2022-07-29T19:44:05,408 writing dependency_links to src/bioontologies.egg-info/dependency_links.txt 2022-07-29T19:44:07,216 writing entry points to src/bioontologies.egg-info/entry_points.txt 2022-07-29T19:44:08,389 writing requirements to src/bioontologies.egg-info/requires.txt 2022-07-29T19:44:08,978 writing top-level names to src/bioontologies.egg-info/top_level.txt 2022-07-29T19:44:09,020 reading manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:44:09,026 reading manifest template 'MANIFEST.in' 2022-07-29T19:44:09,032 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-07-29T19:44:09,032 warnings.warn(msg, warning_class) 2022-07-29T19:44:09,033 no previously-included directories found matching 'scripts' 2022-07-29T19:44:09,033 no previously-included directories found matching 'notebooks' 2022-07-29T19:44:09,034 no previously-included directories found matching 'tests/.pytest_cache' 2022-07-29T19:44:09,051 warning: no files found matching '*.png' under directory 'docs/source' 2022-07-29T19:44:09,052 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-07-29T19:44:09,054 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-07-29T19:44:09,055 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-07-29T19:44:09,056 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-07-29T19:44:09,057 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2022-07-29T19:44:09,059 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2022-07-29T19:44:09,060 warning: no previously-included files found matching 'tox.ini' 2022-07-29T19:44:09,061 warning: no previously-included files found matching '.flake8' 2022-07-29T19:44:09,061 warning: no previously-included files found matching '.bumpversion.cfg' 2022-07-29T19:44:09,062 warning: no previously-included files found matching '.readthedocs.yml' 2022-07-29T19:44:09,063 adding license file 'LICENSE' 2022-07-29T19:44:09,069 writing manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-07-29T19:44:09,074 copying src/bioontologies/py.typed -> build/lib/bioontologies 2022-07-29T19:44:10,336 installing to build/bdist.linux-armv7l/wheel 2022-07-29T19:44:10,336 running install 2022-07-29T19:44:10,398 running install_lib 2022-07-29T19:44:11,028 creating build/bdist.linux-armv7l 2022-07-29T19:44:11,028 creating build/bdist.linux-armv7l/wheel 2022-07-29T19:44:11,031 creating build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,033 copying build/lib/bioontologies/__init__.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,036 copying build/lib/bioontologies/obograph.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,041 copying build/lib/bioontologies/py.typed -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,044 copying build/lib/bioontologies/robot.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,048 copying build/lib/bioontologies/version.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,051 copying build/lib/bioontologies/cli.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,054 copying build/lib/bioontologies/__main__.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-07-29T19:44:11,057 running install_egg_info 2022-07-29T19:44:11,694 Copying src/bioontologies.egg-info to build/bdist.linux-armv7l/wheel/bioontologies-0.1.1-py3.7.egg-info 2022-07-29T19:44:11,721 running install_scripts 2022-07-29T19:44:11,916 creating build/bdist.linux-armv7l/wheel/bioontologies-0.1.1.dist-info/WHEEL 2022-07-29T19:44:11,921 creating '/tmp/pip-wheel-3q76v37u/tmp6x3e24vc/bioontologies-0.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-07-29T19:44:11,925 adding 'bioontologies/__init__.py' 2022-07-29T19:44:11,927 adding 'bioontologies/__main__.py' 2022-07-29T19:44:11,929 adding 'bioontologies/cli.py' 2022-07-29T19:44:11,934 adding 'bioontologies/obograph.py' 2022-07-29T19:44:11,936 adding 'bioontologies/py.typed' 2022-07-29T19:44:11,939 adding 'bioontologies/robot.py' 2022-07-29T19:44:11,942 adding 'bioontologies/version.py' 2022-07-29T19:44:11,946 adding 'bioontologies-0.1.1.dist-info/LICENSE' 2022-07-29T19:44:11,949 adding 'bioontologies-0.1.1.dist-info/METADATA' 2022-07-29T19:44:11,951 adding 'bioontologies-0.1.1.dist-info/WHEEL' 2022-07-29T19:44:11,953 adding 'bioontologies-0.1.1.dist-info/entry_points.txt' 2022-07-29T19:44:11,954 adding 'bioontologies-0.1.1.dist-info/top_level.txt' 2022-07-29T19:44:11,956 adding 'bioontologies-0.1.1.dist-info/RECORD' 2022-07-29T19:44:11,959 removing build/bdist.linux-armv7l/wheel 2022-07-29T19:44:12,225 Building wheel for bioontologies (pyproject.toml): finished with status 'done' 2022-07-29T19:44:12,237 Created wheel for bioontologies: filename=bioontologies-0.1.1-py3-none-any.whl size=13368 sha256=88d6734db023167440ca13719d9900571fed79570cffb5c77594885ee21180b7 2022-07-29T19:44:12,239 Stored in directory: /tmp/pip-ephem-wheel-cache-sec365e5/wheels/09/2c/2e/7fdea7c70afe8ce25654c80bb392a308d4f46e953b3e20bd9f 2022-07-29T19:44:12,265 Successfully built bioontologies 2022-07-29T19:44:12,272 Removed build tracker: '/tmp/pip-build-tracker-3bjtv9ax'