2022-07-30T07:27:27,252 Created temporary directory: /tmp/pip-ephem-wheel-cache-0t9_ksuf
2022-07-30T07:27:27,258 Created temporary directory: /tmp/pip-build-tracker-q48sfl7r
2022-07-30T07:27:27,259 Initialized build tracking at /tmp/pip-build-tracker-q48sfl7r
2022-07-30T07:27:27,259 Created build tracker: /tmp/pip-build-tracker-q48sfl7r
2022-07-30T07:27:27,259 Entered build tracker: /tmp/pip-build-tracker-q48sfl7r
2022-07-30T07:27:27,261 Created temporary directory: /tmp/pip-wheel-ecpqz136
2022-07-30T07:27:27,330 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-07-30T07:27:27,339 2 location(s) to search for versions of frag-pele:
2022-07-30T07:27:27,339 * https://pypi.org/simple/frag-pele/
2022-07-30T07:27:27,339 * https://www.piwheels.org/simple/frag-pele/
2022-07-30T07:27:27,340 Fetching project page and analyzing links: https://pypi.org/simple/frag-pele/
2022-07-30T07:27:27,341 Getting page https://pypi.org/simple/frag-pele/
2022-07-30T07:27:27,345 Found index url https://pypi.org/simple
2022-07-30T07:27:27,548   Found link https://files.pythonhosted.org/packages/04/68/6d6d1e835589a4b25dc8606c3afc9365f6391d2f8deaf20a505280a1d1f4/frag_pele-1.1.0.tar.gz#sha256=dd58277af0db3fa42c95f96b546fcc3b5ea844d36d2626987dd133411f8bf0d3 (from https://pypi.org/simple/frag-pele/), version: 1.1.0
2022-07-30T07:27:27,549   Found link https://files.pythonhosted.org/packages/d0/f0/86387845e4a8f6e60d4a4c22522f839fc3beda80130663bd03382b28a1f4/frag_pele-1.1.0.1.tar.gz#sha256=c489e75d2c39a7d5aebf4c1b62eee5ee379c9de7801588146f19244877117ec0 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.1
2022-07-30T07:27:27,550   Found link https://files.pythonhosted.org/packages/6f/ac/a7720cdad2c4885cb41e28005d05cd1897364e24aa1d2c5ca777e8f74536/frag_pele-1.1.0.2.tar.gz#sha256=a2c7046a9bd88a952d6abcccbee64e400ec6f55cc5e59cd2f929f9bf5f925b36 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.2
2022-07-30T07:27:27,550   Found link https://files.pythonhosted.org/packages/b5/51/ed7816753a4eeed924b5890507ebcfe9a413d63070b08ac248f683cefac2/frag_pele-1.1.0.3.tar.gz#sha256=520f8442ed7f0f9d0508d8cb737fc530584f92af11ccf5de499b756ed5406272 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.3
2022-07-30T07:27:27,551   Found link https://files.pythonhosted.org/packages/61/ea/5ce7db4a2a80a6869779d2aa19a9a3218a25787860ce16c0765e83bb01fe/frag_pele-1.1.0.4.tar.gz#sha256=02eeff856281090a6b00a9f57a887c51dc012936068b74908a6c00ab5109f034 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.4
2022-07-30T07:27:27,552   Found link https://files.pythonhosted.org/packages/ed/d4/6648da9cb9257d09439502d43db14a4942c4d1dd35d40377d4ce46c3c466/frag_pele-2.1.1.tar.gz#sha256=ef6b789f430e2222a5e0627e64b503dd74b4c66f0321e35daeab2d856e314d0a (from https://pypi.org/simple/frag-pele/), version: 2.1.1
2022-07-30T07:27:27,553   Found link https://files.pythonhosted.org/packages/ee/f5/0400b73f5f6be4e6fb5a1792db7698af6084f6930a9abeb89cb1535f1bdd/frag_pele-2.1.2.tar.gz#sha256=625300b3f32c23c7e8a14c263eded89b7adf11893eb85e4718800ee2f9d89a54 (from https://pypi.org/simple/frag-pele/), version: 2.1.2
2022-07-30T07:27:27,553   Found link https://files.pythonhosted.org/packages/90/35/ace23ab99bc3e98a8269a3a3d33e8e717768ff6db75754077efd94323e16/frag_pele-2.1.3.tar.gz#sha256=7411cc49a09a9565a7713d5554d57957e4dc8457361f6f8ba8b5ab53a4bca573 (from https://pypi.org/simple/frag-pele/), version: 2.1.3
2022-07-30T07:27:27,554   Found link https://files.pythonhosted.org/packages/79/a5/050e2ac47772096b1906f154e7c704d2e3d121823fe04772618f4e288289/frag_pele-2.2.1.tar.gz#sha256=2960112e018694cb1ede57429964732a12fe6a485d11ee542ef70d48e650fb37 (from https://pypi.org/simple/frag-pele/), version: 2.2.1
2022-07-30T07:27:27,555   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/4a/93/046a93fe08f3f658c27530aadccb6b6e9e9a1cb25aae99d86940af5adce0/frag_pele-3.0.0-py3-none-any.whl#sha256=1793462d15783e1f0cf560b62550e3dfd2d27b4ee54d8ad026a23114f0386b42 (from https://pypi.org/simple/frag-pele/)
2022-07-30T07:27:27,555   Found link https://files.pythonhosted.org/packages/33/76/a0f81fd6c76ea115357677bb529efebf25ae6b905c2bcccb17a2f6f1718b/frag_pele-3.0.0.tar.gz#sha256=540ee2c709f070752bdebe6cf7af110dd071287a01611bf76a2299be30c2697d (from https://pypi.org/simple/frag-pele/), version: 3.0.0
2022-07-30T07:27:27,556   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/94/4c/1549b7349fec873e2c06fae6013fbcfcb2bd626e06d864b313d01d62d955/frag_pele-3.1.0-py3-none-any.whl#sha256=398507cf87b710bae4a6b7ad57ad77928c05a537c15b4d36d25e7f876a571f30 (from https://pypi.org/simple/frag-pele/)
2022-07-30T07:27:27,557   Found link https://files.pythonhosted.org/packages/5d/e6/51b6246b18f137175acd3ba628369d5608cff0de6b73bba3e8e6cd24a031/frag_pele-3.1.0.tar.gz#sha256=d8ef0d39ae6b71825be83c189253754d68c6307fdfef9633fcc11e4dc5078721 (from https://pypi.org/simple/frag-pele/), version: 3.1.0
2022-07-30T07:27:27,558   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/16/15/e3132e52417b05a0c88ed42ea62498b2641052cf42e6a42b4d204754c9ae/frag_pele-3.1.1-py3-none-any.whl#sha256=476b2ce89142c0f2b96593cd4d190ba4f7e1918aee7e623a827b6c201041b855 (from https://pypi.org/simple/frag-pele/)
2022-07-30T07:27:27,558   Found link https://files.pythonhosted.org/packages/cc/2d/7ff1c9faf26cf8824380629807559002692ffef0b42dddbc1823b9abc521/frag_pele-3.1.1.tar.gz#sha256=f3d9a1c5858167db0d6d6094175627f5232a531c0dafc06434c2f57e68719e1a (from https://pypi.org/simple/frag-pele/), version: 3.1.1
2022-07-30T07:27:27,559   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/32/ad/92e938dfbde9c8a3d98125a92eddd37b260ab4ebc40746c048d03ad98318/frag_pele-3.1.2-py3-none-any.whl#sha256=02afd1f7564096e08c705103253de5727f39631cf5344c823c44e2afba34eb40 (from https://pypi.org/simple/frag-pele/)
2022-07-30T07:27:27,559   Found link https://files.pythonhosted.org/packages/5a/ef/977fde423ae01b491519f8028f7e286848c51f01a3eefa51593996d91ceb/frag_pele-3.1.2.tar.gz#sha256=fd3757aca3d19b78b329200d809c61773f90dc4f00767ae122e281cbfff2a3aa (from https://pypi.org/simple/frag-pele/), version: 3.1.2
2022-07-30T07:27:27,560   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/ff/b0/1a7d694865bc6c8bb32d7d2693ae1b3bbe074ad5b6dad5cfdbb8b7fe076d/frag_pele-3.1.3-py3-none-any.whl#sha256=2c1be406914fec434950d8514c9852576d51fa36149121c70ed824f4d66f5c89 (from https://pypi.org/simple/frag-pele/)
2022-07-30T07:27:27,561   Found link https://files.pythonhosted.org/packages/bd/8b/8754c70b54071cc0e9b5c49ddf360d8278611f4b6a6b05a6162c9b7fb0a1/frag_pele-3.1.3.tar.gz#sha256=aed1a2ec6ca7369677ce0cad283d272333d2d02e9370291827045798cc3c94a6 (from https://pypi.org/simple/frag-pele/), version: 3.1.3
2022-07-30T07:27:27,562 Fetching project page and analyzing links: https://www.piwheels.org/simple/frag-pele/
2022-07-30T07:27:27,562 Getting page https://www.piwheels.org/simple/frag-pele/
2022-07-30T07:27:27,564 Found index url https://www.piwheels.org/simple
2022-07-30T07:27:27,860   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-3.1.2-py3-none-any.whl#sha256=75868403d44d58091fd2ee6662e81489116cedf3da152a42ea37be4b02a2e040 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,861   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-3.1.1-py3-none-any.whl#sha256=a36f94ff40e24eb6335bebdcdb7dfdc7ccff725ccf542f2972162d336ea4458e (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,862   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-3.1.0-py3-none-any.whl#sha256=9455207f1075adb67362805e3a8593d2a670b5d0e3c593fed14264c0356faad7 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,862   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-3.0.0-py3-none-any.whl#sha256=1793462d15783e1f0cf560b62550e3dfd2d27b4ee54d8ad026a23114f0386b42 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,863   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-2.2.1-py3-none-any.whl#sha256=dac51d1ee2aae573ddceba053c9b3710c17dfad54dd9868508c09b2b78ef562b (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,864   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-2.1.3-py3-none-any.whl#sha256=6f92a9b1a982e5de58bb9ddad669b8bf101cb931228adc6af0490116f05c251d (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,864   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-2.1.2-py3-none-any.whl#sha256=62b6da24477854ebf1cdaa132a0fc842846a7cf0537a57f8c5b495c9704e6e85 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,865   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-2.1.1-py3-none-any.whl#sha256=3cdd313a3e30f08a1ee8a11f0e8e77faac7f8fc7b5c59092751030c27dd488c7 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,865   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp39-cp39-linux_armv7l.whl#sha256=fded52cf53bcd8944e76b691093e2fbd3f031d25dc750aa82083161a65b2c358 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,866   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp39-cp39-linux_armv6l.whl#sha256=fded52cf53bcd8944e76b691093e2fbd3f031d25dc750aa82083161a65b2c358 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,866   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp35-cp35m-linux_armv6l.whl#sha256=ecbc03d97775d35e2e7de4c4a50a95cf82132f1d9720ad35e939f4a4b81df1e1 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,867   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp35-cp35m-linux_armv7l.whl#sha256=ecbc03d97775d35e2e7de4c4a50a95cf82132f1d9720ad35e939f4a4b81df1e1 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,867   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp34-cp34m-linux_armv6l.whl#sha256=d2a41b35404590d3eaaac367a1ae968b147a62bf0cf08f61b759c95da4f09824 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,868   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp34-cp34m-linux_armv7l.whl#sha256=d2a41b35404590d3eaaac367a1ae968b147a62bf0cf08f61b759c95da4f09824 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,868   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=c25edd25bda1a186feb908f0e3d69c70abbb71d27579bb61a4c9b8b9d909e58c (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,869   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=c25edd25bda1a186feb908f0e3d69c70abbb71d27579bb61a4c9b8b9d909e58c (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,869   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp39-cp39-linux_armv7l.whl#sha256=63262fc334d8ad3a159032168f846626e7bf8813d7db00e2be5551fca184913d (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,870   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp39-cp39-linux_armv6l.whl#sha256=63262fc334d8ad3a159032168f846626e7bf8813d7db00e2be5551fca184913d (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,870   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp34-cp34m-linux_armv6l.whl#sha256=6ae3a6312c856611ae9b7250efcbeac51812b52fda47ad11a2b7cfd42cf34078 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,871   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp34-cp34m-linux_armv7l.whl#sha256=6ae3a6312c856611ae9b7250efcbeac51812b52fda47ad11a2b7cfd42cf34078 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,872   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp35-cp35m-linux_armv6l.whl#sha256=956dc65e7b2172f4d87591bbdda984a3c93fadffe2c39699b770702f9e6c7df4 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,872   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp35-cp35m-linux_armv7l.whl#sha256=956dc65e7b2172f4d87591bbdda984a3c93fadffe2c39699b770702f9e6c7df4 (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,873   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=df4eebeb3a3755b2931d10bc8550eee5cde15b72829fcad88ffef825bdcaa47a (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,873   Skipping link: No binaries permitted for frag-pele: https://www.piwheels.org/simple/frag-pele/frag_pele-1.1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=df4eebeb3a3755b2931d10bc8550eee5cde15b72829fcad88ffef825bdcaa47a (from https://www.piwheels.org/simple/frag-pele/)
2022-07-30T07:27:27,874 Skipping link: not a file: https://www.piwheels.org/simple/frag-pele/
2022-07-30T07:27:27,874 Skipping link: not a file: https://pypi.org/simple/frag-pele/
2022-07-30T07:27:27,913 Given no hashes to check 1 links for project 'frag-pele': discarding no candidates
2022-07-30T07:27:27,944 Collecting frag-pele==3.1.3
2022-07-30T07:27:27,949   Created temporary directory: /tmp/pip-unpack-ab1lyo7p
2022-07-30T07:27:28,219   Downloading frag_pele-3.1.3.tar.gz (162 kB)
2022-07-30T07:27:28,691   Added frag-pele==3.1.3 from https://files.pythonhosted.org/packages/bd/8b/8754c70b54071cc0e9b5c49ddf360d8278611f4b6a6b05a6162c9b7fb0a1/frag_pele-3.1.3.tar.gz#sha256=aed1a2ec6ca7369677ce0cad283d272333d2d02e9370291827045798cc3c94a6 to build tracker '/tmp/pip-build-tracker-q48sfl7r'
2022-07-30T07:27:28,695   Running setup.py (path:/tmp/pip-wheel-ecpqz136/frag-pele_f8b234abaafb4338895f6a3407bc10ac/setup.py) egg_info for package frag-pele
2022-07-30T07:27:28,696   Created temporary directory: /tmp/pip-pip-egg-info-pmjzyshl
2022-07-30T07:27:28,697   Preparing metadata (setup.py): started
2022-07-30T07:27:28,699   Running command python setup.py egg_info
2022-07-30T07:27:32,478   Warning: 'classifiers' should be a list, got type 'tuple'
2022-07-30T07:27:36,940   running egg_info
2022-07-30T07:27:36,946   creating /tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info
2022-07-30T07:27:37,610   writing /tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/PKG-INFO
2022-07-30T07:27:38,198   writing dependency_links to /tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/dependency_links.txt
2022-07-30T07:27:41,131   writing requirements to /tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/requires.txt
2022-07-30T07:27:41,723   writing top-level names to /tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/top_level.txt
2022-07-30T07:27:41,726   writing manifest file '/tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/SOURCES.txt'
2022-07-30T07:27:42,588   reading manifest file '/tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/SOURCES.txt'
2022-07-30T07:27:42,591   reading manifest template 'MANIFEST.in'
2022-07-30T07:27:42,597   warning: no files found matching 'frag_pele/AdaptivePELE_repo/AdaptivePELE/atomset/*'
2022-07-30T07:27:42,598   adding license file 'LICENSE'
2022-07-30T07:27:42,608   writing manifest file '/tmp/pip-pip-egg-info-pmjzyshl/frag_pele.egg-info/SOURCES.txt'
2022-07-30T07:27:42,884   Preparing metadata (setup.py): finished with status 'done'
2022-07-30T07:27:42,895   Source in /tmp/pip-wheel-ecpqz136/frag-pele_f8b234abaafb4338895f6a3407bc10ac has version 3.1.3, which satisfies requirement frag-pele==3.1.3 from https://files.pythonhosted.org/packages/bd/8b/8754c70b54071cc0e9b5c49ddf360d8278611f4b6a6b05a6162c9b7fb0a1/frag_pele-3.1.3.tar.gz#sha256=aed1a2ec6ca7369677ce0cad283d272333d2d02e9370291827045798cc3c94a6
2022-07-30T07:27:42,897   Removed frag-pele==3.1.3 from https://files.pythonhosted.org/packages/bd/8b/8754c70b54071cc0e9b5c49ddf360d8278611f4b6a6b05a6162c9b7fb0a1/frag_pele-3.1.3.tar.gz#sha256=aed1a2ec6ca7369677ce0cad283d272333d2d02e9370291827045798cc3c94a6 from build tracker '/tmp/pip-build-tracker-q48sfl7r'
2022-07-30T07:27:42,906 Created temporary directory: /tmp/pip-unpack-m0dxni7k
2022-07-30T07:27:42,907 Building wheels for collected packages: frag-pele
2022-07-30T07:27:42,917   Created temporary directory: /tmp/pip-wheel-slvd2mdn
2022-07-30T07:27:42,918   Building wheel for frag-pele (setup.py): started
2022-07-30T07:27:42,920   Destination directory: /tmp/pip-wheel-slvd2mdn
2022-07-30T07:27:42,920   Running command python setup.py bdist_wheel
2022-07-30T07:27:46,510   Warning: 'classifiers' should be a list, got type 'tuple'
2022-07-30T07:27:50,414   running bdist_wheel
2022-07-30T07:27:50,649   running build
2022-07-30T07:27:50,650   running build_py
2022-07-30T07:27:51,315   creating build
2022-07-30T07:27:51,316   creating build/lib
2022-07-30T07:27:51,317   creating build/lib/frag_pele
2022-07-30T07:27:51,319   copying frag_pele/__init__.py -> build/lib/frag_pele
2022-07-30T07:27:51,323   copying frag_pele/serie_handler.py -> build/lib/frag_pele
2022-07-30T07:27:51,327   copying frag_pele/constants.py -> build/lib/frag_pele
2022-07-30T07:27:51,330   copying frag_pele/main.py -> build/lib/frag_pele
2022-07-30T07:27:51,340   creating build/lib/frag_pele/Covalent
2022-07-30T07:27:51,341   copying frag_pele/Covalent/__init__.py -> build/lib/frag_pele/Covalent
2022-07-30T07:27:51,344   copying frag_pele/Covalent/pdb_corrector.py -> build/lib/frag_pele/Covalent
2022-07-30T07:27:51,348   copying frag_pele/Covalent/correct_pdb_to_covalent_res.py -> build/lib/frag_pele/Covalent
2022-07-30T07:27:51,352   copying frag_pele/Covalent/prepare_pdb_to_cov_heteroatom.py -> build/lib/frag_pele/Covalent
2022-07-30T07:27:51,355   copying frag_pele/Covalent/correct_template_of_backbone_res.py -> build/lib/frag_pele/Covalent
2022-07-30T07:27:51,358   copying frag_pele/Covalent/correct_rotamer_library.py -> build/lib/frag_pele/Covalent
2022-07-30T07:27:51,363   creating build/lib/frag_pele/Growing
2022-07-30T07:27:51,364   copying frag_pele/Growing/__init__.py -> build/lib/frag_pele/Growing
2022-07-30T07:27:51,367   copying frag_pele/Growing/template_selector.py -> build/lib/frag_pele/Growing
2022-07-30T07:27:51,370   copying frag_pele/Growing/template_fragmenter.py -> build/lib/frag_pele/Growing
2022-07-30T07:27:51,376   copying frag_pele/Growing/bestStructs.py -> build/lib/frag_pele/Growing
2022-07-30T07:27:51,380   copying frag_pele/Growing/simulations_linker.py -> build/lib/frag_pele/Growing
2022-07-30T07:27:51,383   copying frag_pele/Growing/add_fragment_from_pdbs.py -> build/lib/frag_pele/Growing
2022-07-30T07:27:51,391   creating build/lib/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:51,392   copying frag_pele/PlopRotTemp_S_2017/__init__.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:51,395   copying frag_pele/PlopRotTemp_S_2017/PlopRotTemp.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:51,405   copying frag_pele/PlopRotTemp_S_2017/ligand_prep.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:51,407   copying frag_pele/PlopRotTemp_S_2017/main.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:51,414   creating build/lib/frag_pele/Helpers
2022-07-30T07:27:51,416   copying frag_pele/Helpers/plop_rot_temp.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,420   copying frag_pele/Helpers/__init__.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,423   copying frag_pele/Helpers/runner.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,427   copying frag_pele/Helpers/clusterizer.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,430   copying frag_pele/Helpers/folder_handler.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,433   copying frag_pele/Helpers/center_of_mass.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,436   copying frag_pele/Helpers/checker.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,439   copying frag_pele/Helpers/create_templates.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,443   copying frag_pele/Helpers/correct_fragment_names.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,446   copying frag_pele/Helpers/constraints.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,450   copying frag_pele/Helpers/helpers.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,453   copying frag_pele/Helpers/find_dihedrals.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,456   copying frag_pele/Helpers/templatize.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,459   copying frag_pele/Helpers/check_constants.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,462   copying frag_pele/Helpers/conda_deploy.py -> build/lib/frag_pele/Helpers
2022-07-30T07:27:51,467   creating build/lib/frag_pele/Analysis
2022-07-30T07:27:51,468   copying frag_pele/Analysis/__init__.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,471   copying frag_pele/Analysis/interaction_detector.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,476   copying frag_pele/Analysis/sidecahins_analyser.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,480   copying frag_pele/Analysis/compute_atom_atom_distance.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,483   copying frag_pele/Analysis/rmsd_computer.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,486   copying frag_pele/Analysis/output_files.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,489   copying frag_pele/Analysis/backtrackFragTrajectory.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,493   copying frag_pele/Analysis/forcefield_analysis.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,496   copying frag_pele/Analysis/backtrackConnectivity.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,499   copying frag_pele/Analysis/analyser.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,503   copying frag_pele/Analysis/get_plots.py -> build/lib/frag_pele/Analysis
2022-07-30T07:27:51,508   creating build/lib/frag_pele/Banner
2022-07-30T07:27:51,510   copying frag_pele/Banner/__init__.py -> build/lib/frag_pele/Banner
2022-07-30T07:27:51,512   copying frag_pele/Banner/Detector.py -> build/lib/frag_pele/Banner
2022-07-30T07:27:51,517   creating build/lib/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:51,518   copying frag_pele/Growing/AddingFragHelpers/__init__.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:51,521   copying frag_pele/Growing/AddingFragHelpers/pdb_joiner.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:51,525   copying frag_pele/Growing/AddingFragHelpers/atom_constants.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:51,528   copying frag_pele/Growing/AddingFragHelpers/complex_to_prody.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:51,532   creating build/lib/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:51,533   copying frag_pele/PlopRotTemp_S_2017/template/__init__.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:51,536   copying frag_pele/PlopRotTemp_S_2017/template/tmp_helpers.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:51,539   copying frag_pele/PlopRotTemp_S_2017/template/templateBuilder.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:51,544   copying frag_pele/PlopRotTemp_S_2017/template/chargeHandler.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:51,546   running egg_info
2022-07-30T07:27:52,887   writing frag_pele.egg-info/PKG-INFO
2022-07-30T07:27:53,474   writing dependency_links to frag_pele.egg-info/dependency_links.txt
2022-07-30T07:27:56,456   writing requirements to frag_pele.egg-info/requires.txt
2022-07-30T07:27:57,043   writing top-level names to frag_pele.egg-info/top_level.txt
2022-07-30T07:27:57,143   reading manifest file 'frag_pele.egg-info/SOURCES.txt'
2022-07-30T07:27:57,153   reading manifest template 'MANIFEST.in'
2022-07-30T07:27:57,159   warning: no files found matching 'frag_pele/AdaptivePELE_repo/AdaptivePELE/atomset/*'
2022-07-30T07:27:57,160   adding license file 'LICENSE'
2022-07-30T07:27:57,172   writing manifest file 'frag_pele.egg-info/SOURCES.txt'
2022-07-30T07:27:57,179   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning:     !!


2022-07-30T07:27:57,180       ############################
2022-07-30T07:27:57,180       # Package would be ignored #
2022-07-30T07:27:57,181       ############################
2022-07-30T07:27:57,181       Python recognizes 'frag_pele.PlopRotTemp_S_2017.param' as an importable package, however it is
2022-07-30T07:27:57,181       included in the distribution as "data".
2022-07-30T07:27:57,182       This behavior is likely to change in future versions of setuptools (and
2022-07-30T07:27:57,182       therefore is considered deprecated).

2022-07-30T07:27:57,182       Please make sure that 'frag_pele.PlopRotTemp_S_2017.param' is included as a package by using
2022-07-30T07:27:57,183       setuptools' `packages` configuration field or the proper discovery methods.

2022-07-30T07:27:57,183       You can read more about "package discovery" and "data files" on setuptools
2022-07-30T07:27:57,184       documentation page.


2022-07-30T07:27:57,185   !!

2022-07-30T07:27:57,185     check.warn(importable)
2022-07-30T07:27:57,186   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning:     !!


2022-07-30T07:27:57,186       ############################
2022-07-30T07:27:57,187       # Package would be ignored #
2022-07-30T07:27:57,187       ############################
2022-07-30T07:27:57,187       Python recognizes 'frag_pele.Templates' as an importable package, however it is
2022-07-30T07:27:57,188       included in the distribution as "data".
2022-07-30T07:27:57,188       This behavior is likely to change in future versions of setuptools (and
2022-07-30T07:27:57,188       therefore is considered deprecated).

2022-07-30T07:27:57,189       Please make sure that 'frag_pele.Templates' is included as a package by using
2022-07-30T07:27:57,189       setuptools' `packages` configuration field or the proper discovery methods.

2022-07-30T07:27:57,190       You can read more about "package discovery" and "data files" on setuptools
2022-07-30T07:27:57,190       documentation page.


2022-07-30T07:27:57,191   !!

2022-07-30T07:27:57,192     check.warn(importable)
2022-07-30T07:27:57,192   copying frag_pele/log_configure.ini -> build/lib/frag_pele
2022-07-30T07:27:57,193   creating build/lib/frag_pele/Templates
2022-07-30T07:27:57,194   copying frag_pele/Templates/constants.py -> build/lib/frag_pele/Templates
2022-07-30T07:27:57,199   copying frag_pele/Templates/control_covalent.conf -> build/lib/frag_pele/Templates
2022-07-30T07:27:57,204   copying frag_pele/Templates/control_off.conf -> build/lib/frag_pele/Templates
2022-07-30T07:27:57,209   copying frag_pele/Templates/control_template.conf -> build/lib/frag_pele/Templates
2022-07-30T07:27:57,215   creating build/lib/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:57,217   copying frag_pele/PlopRotTemp_S_2017/param/f14_sgbnp.param -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:57,222   copying frag_pele/PlopRotTemp_S_2017/param/params.cov -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:57,234   copying frag_pele/PlopRotTemp_S_2017/param/params.nb -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:57,240   copying frag_pele/PlopRotTemp_S_2017/param/sgbnp.param -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:57,246   copying frag_pele/PlopRotTemp_S_2017/param/similarity.param -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:57,934   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-07-30T07:27:57,935     setuptools.SetuptoolsDeprecationWarning,
2022-07-30T07:27:58,605   installing to build/bdist.linux-armv7l/wheel
2022-07-30T07:27:58,605   running install
2022-07-30T07:27:58,668   running install_lib
2022-07-30T07:27:59,339   creating build/bdist.linux-armv7l
2022-07-30T07:27:59,340   creating build/bdist.linux-armv7l/wheel
2022-07-30T07:27:59,344   creating build/bdist.linux-armv7l/wheel/frag_pele
2022-07-30T07:27:59,348   creating build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,350   copying build/lib/frag_pele/Covalent/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,354   copying build/lib/frag_pele/Covalent/pdb_corrector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,359   copying build/lib/frag_pele/Covalent/correct_pdb_to_covalent_res.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,364   copying build/lib/frag_pele/Covalent/prepare_pdb_to_cov_heteroatom.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,370   copying build/lib/frag_pele/Covalent/correct_template_of_backbone_res.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,374   copying build/lib/frag_pele/Covalent/correct_rotamer_library.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2022-07-30T07:27:59,379   creating build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,383   creating build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:59,385   copying build/lib/frag_pele/Growing/AddingFragHelpers/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:59,389   copying build/lib/frag_pele/Growing/AddingFragHelpers/pdb_joiner.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:59,394   copying build/lib/frag_pele/Growing/AddingFragHelpers/atom_constants.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:59,399   copying build/lib/frag_pele/Growing/AddingFragHelpers/complex_to_prody.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2022-07-30T07:27:59,403   copying build/lib/frag_pele/Growing/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,407   copying build/lib/frag_pele/Growing/template_selector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,411   copying build/lib/frag_pele/Growing/template_fragmenter.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,418   copying build/lib/frag_pele/Growing/bestStructs.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,423   copying build/lib/frag_pele/Growing/simulations_linker.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,428   copying build/lib/frag_pele/Growing/add_fragment_from_pdbs.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2022-07-30T07:27:59,437   creating build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:59,439   copying build/lib/frag_pele/PlopRotTemp_S_2017/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:59,443   copying build/lib/frag_pele/PlopRotTemp_S_2017/PlopRotTemp.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:59,457   creating build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:59,460   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/params.nb -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:59,466   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/sgbnp.param -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:59,471   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/f14_sgbnp.param -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:59,476   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/similarity.param -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:59,481   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/params.cov -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2022-07-30T07:27:59,494   creating build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:59,496   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:59,500   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/tmp_helpers.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:59,504   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/templateBuilder.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:59,510   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/chargeHandler.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2022-07-30T07:27:59,514   copying build/lib/frag_pele/PlopRotTemp_S_2017/ligand_prep.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:59,518   copying build/lib/frag_pele/PlopRotTemp_S_2017/main.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2022-07-30T07:27:59,524   copying build/lib/frag_pele/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele
2022-07-30T07:27:59,529   creating build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,531   copying build/lib/frag_pele/Helpers/plop_rot_temp.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,535   copying build/lib/frag_pele/Helpers/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,538   copying build/lib/frag_pele/Helpers/runner.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,543   copying build/lib/frag_pele/Helpers/clusterizer.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,547   copying build/lib/frag_pele/Helpers/folder_handler.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,551   copying build/lib/frag_pele/Helpers/center_of_mass.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,556   copying build/lib/frag_pele/Helpers/checker.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,560   copying build/lib/frag_pele/Helpers/create_templates.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,564   copying build/lib/frag_pele/Helpers/correct_fragment_names.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,568   copying build/lib/frag_pele/Helpers/constraints.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,573   copying build/lib/frag_pele/Helpers/helpers.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,577   copying build/lib/frag_pele/Helpers/find_dihedrals.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,581   copying build/lib/frag_pele/Helpers/templatize.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,585   copying build/lib/frag_pele/Helpers/check_constants.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,589   copying build/lib/frag_pele/Helpers/conda_deploy.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2022-07-30T07:27:59,594   creating build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,596   copying build/lib/frag_pele/Analysis/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,600   copying build/lib/frag_pele/Analysis/interaction_detector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,605   copying build/lib/frag_pele/Analysis/sidecahins_analyser.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,609   copying build/lib/frag_pele/Analysis/compute_atom_atom_distance.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,613   copying build/lib/frag_pele/Analysis/rmsd_computer.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,618   copying build/lib/frag_pele/Analysis/output_files.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,622   copying build/lib/frag_pele/Analysis/backtrackFragTrajectory.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,627   copying build/lib/frag_pele/Analysis/forcefield_analysis.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,631   copying build/lib/frag_pele/Analysis/backtrackConnectivity.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,635   copying build/lib/frag_pele/Analysis/analyser.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,640   copying build/lib/frag_pele/Analysis/get_plots.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2022-07-30T07:27:59,645   copying build/lib/frag_pele/log_configure.ini -> build/bdist.linux-armv7l/wheel/frag_pele
2022-07-30T07:27:59,650   creating build/bdist.linux-armv7l/wheel/frag_pele/Banner
2022-07-30T07:27:59,652   copying build/lib/frag_pele/Banner/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Banner
2022-07-30T07:27:59,655   copying build/lib/frag_pele/Banner/Detector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Banner
2022-07-30T07:27:59,659   copying build/lib/frag_pele/serie_handler.py -> build/bdist.linux-armv7l/wheel/frag_pele
2022-07-30T07:27:59,665   creating build/bdist.linux-armv7l/wheel/frag_pele/Templates
2022-07-30T07:27:59,667   copying build/lib/frag_pele/Templates/control_template.conf -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2022-07-30T07:27:59,672   copying build/lib/frag_pele/Templates/control_covalent.conf -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2022-07-30T07:27:59,676   copying build/lib/frag_pele/Templates/constants.py -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2022-07-30T07:27:59,680   copying build/lib/frag_pele/Templates/control_off.conf -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2022-07-30T07:27:59,684   copying build/lib/frag_pele/constants.py -> build/bdist.linux-armv7l/wheel/frag_pele
2022-07-30T07:27:59,688   copying build/lib/frag_pele/main.py -> build/bdist.linux-armv7l/wheel/frag_pele
2022-07-30T07:27:59,695   running install_egg_info
2022-07-30T07:28:00,371   Copying frag_pele.egg-info to build/bdist.linux-armv7l/wheel/frag_pele-3.1.3-py3.7.egg-info
2022-07-30T07:28:00,392   running install_scripts
2022-07-30T07:28:00,551   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-07-30T07:28:00,560   creating build/bdist.linux-armv7l/wheel/frag_pele-3.1.3.dist-info/WHEEL
2022-07-30T07:28:00,566   creating '/tmp/pip-wheel-slvd2mdn/frag_pele-3.1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-07-30T07:28:00,571   adding 'frag_pele/__init__.py'
2022-07-30T07:28:00,574   adding 'frag_pele/constants.py'
2022-07-30T07:28:00,577   adding 'frag_pele/log_configure.ini'
2022-07-30T07:28:00,595   adding 'frag_pele/main.py'
2022-07-30T07:28:00,600   adding 'frag_pele/serie_handler.py'
2022-07-30T07:28:00,604   adding 'frag_pele/Analysis/__init__.py'
2022-07-30T07:28:00,608   adding 'frag_pele/Analysis/analyser.py'
2022-07-30T07:28:00,612   adding 'frag_pele/Analysis/backtrackConnectivity.py'
2022-07-30T07:28:00,615   adding 'frag_pele/Analysis/backtrackFragTrajectory.py'
2022-07-30T07:28:00,619   adding 'frag_pele/Analysis/compute_atom_atom_distance.py'
2022-07-30T07:28:00,622   adding 'frag_pele/Analysis/forcefield_analysis.py'
2022-07-30T07:28:00,627   adding 'frag_pele/Analysis/get_plots.py'
2022-07-30T07:28:00,632   adding 'frag_pele/Analysis/interaction_detector.py'
2022-07-30T07:28:00,636   adding 'frag_pele/Analysis/output_files.py'
2022-07-30T07:28:00,641   adding 'frag_pele/Analysis/rmsd_computer.py'
2022-07-30T07:28:00,646   adding 'frag_pele/Analysis/sidecahins_analyser.py'
2022-07-30T07:28:00,650   adding 'frag_pele/Banner/Detector.py'
2022-07-30T07:28:00,653   adding 'frag_pele/Banner/__init__.py'
2022-07-30T07:28:00,657   adding 'frag_pele/Covalent/__init__.py'
2022-07-30T07:28:00,660   adding 'frag_pele/Covalent/correct_pdb_to_covalent_res.py'
2022-07-30T07:28:00,663   adding 'frag_pele/Covalent/correct_rotamer_library.py'
2022-07-30T07:28:00,667   adding 'frag_pele/Covalent/correct_template_of_backbone_res.py'
2022-07-30T07:28:00,671   adding 'frag_pele/Covalent/pdb_corrector.py'
2022-07-30T07:28:00,676   adding 'frag_pele/Covalent/prepare_pdb_to_cov_heteroatom.py'
2022-07-30T07:28:00,680   adding 'frag_pele/Growing/__init__.py'
2022-07-30T07:28:00,696   adding 'frag_pele/Growing/add_fragment_from_pdbs.py'
2022-07-30T07:28:00,701   adding 'frag_pele/Growing/bestStructs.py'
2022-07-30T07:28:00,705   adding 'frag_pele/Growing/simulations_linker.py'
2022-07-30T07:28:00,717   adding 'frag_pele/Growing/template_fragmenter.py'
2022-07-30T07:28:00,722   adding 'frag_pele/Growing/template_selector.py'
2022-07-30T07:28:00,725   adding 'frag_pele/Growing/AddingFragHelpers/__init__.py'
2022-07-30T07:28:00,729   adding 'frag_pele/Growing/AddingFragHelpers/atom_constants.py'
2022-07-30T07:28:00,732   adding 'frag_pele/Growing/AddingFragHelpers/complex_to_prody.py'
2022-07-30T07:28:00,737   adding 'frag_pele/Growing/AddingFragHelpers/pdb_joiner.py'
2022-07-30T07:28:00,741   adding 'frag_pele/Helpers/__init__.py'
2022-07-30T07:28:00,745   adding 'frag_pele/Helpers/center_of_mass.py'
2022-07-30T07:28:00,748   adding 'frag_pele/Helpers/check_constants.py'
2022-07-30T07:28:00,751   adding 'frag_pele/Helpers/checker.py'
2022-07-30T07:28:00,754   adding 'frag_pele/Helpers/clusterizer.py'
2022-07-30T07:28:00,757   adding 'frag_pele/Helpers/conda_deploy.py'
2022-07-30T07:28:00,761   adding 'frag_pele/Helpers/constraints.py'
2022-07-30T07:28:00,764   adding 'frag_pele/Helpers/correct_fragment_names.py'
2022-07-30T07:28:00,768   adding 'frag_pele/Helpers/create_templates.py'
2022-07-30T07:28:00,771   adding 'frag_pele/Helpers/find_dihedrals.py'
2022-07-30T07:28:00,774   adding 'frag_pele/Helpers/folder_handler.py'
2022-07-30T07:28:00,778   adding 'frag_pele/Helpers/helpers.py'
2022-07-30T07:28:00,781   adding 'frag_pele/Helpers/plop_rot_temp.py'
2022-07-30T07:28:00,784   adding 'frag_pele/Helpers/runner.py'
2022-07-30T07:28:00,787   adding 'frag_pele/Helpers/templatize.py'
2022-07-30T07:28:00,826   adding 'frag_pele/PlopRotTemp_S_2017/PlopRotTemp.py'
2022-07-30T07:28:00,831   adding 'frag_pele/PlopRotTemp_S_2017/__init__.py'
2022-07-30T07:28:00,835   adding 'frag_pele/PlopRotTemp_S_2017/ligand_prep.py'
2022-07-30T07:28:00,840   adding 'frag_pele/PlopRotTemp_S_2017/main.py'
2022-07-30T07:28:00,846   adding 'frag_pele/PlopRotTemp_S_2017/param/f14_sgbnp.param'
2022-07-30T07:28:00,877   adding 'frag_pele/PlopRotTemp_S_2017/param/params.cov'
2022-07-30T07:28:00,887   adding 'frag_pele/PlopRotTemp_S_2017/param/params.nb'
2022-07-30T07:28:00,894   adding 'frag_pele/PlopRotTemp_S_2017/param/sgbnp.param'
2022-07-30T07:28:00,903   adding 'frag_pele/PlopRotTemp_S_2017/param/similarity.param'
2022-07-30T07:28:00,907   adding 'frag_pele/PlopRotTemp_S_2017/template/__init__.py'
2022-07-30T07:28:00,910   adding 'frag_pele/PlopRotTemp_S_2017/template/chargeHandler.py'
2022-07-30T07:28:00,918   adding 'frag_pele/PlopRotTemp_S_2017/template/templateBuilder.py'
2022-07-30T07:28:00,922   adding 'frag_pele/PlopRotTemp_S_2017/template/tmp_helpers.py'
2022-07-30T07:28:00,926   adding 'frag_pele/Templates/constants.py'
2022-07-30T07:28:00,930   adding 'frag_pele/Templates/control_covalent.conf'
2022-07-30T07:28:00,933   adding 'frag_pele/Templates/control_off.conf'
2022-07-30T07:28:00,937   adding 'frag_pele/Templates/control_template.conf'
2022-07-30T07:28:00,942   adding 'frag_pele-3.1.3.dist-info/LICENSE'
2022-07-30T07:28:00,945   adding 'frag_pele-3.1.3.dist-info/METADATA'
2022-07-30T07:28:00,947   adding 'frag_pele-3.1.3.dist-info/WHEEL'
2022-07-30T07:28:00,949   adding 'frag_pele-3.1.3.dist-info/top_level.txt'
2022-07-30T07:28:00,952   adding 'frag_pele-3.1.3.dist-info/RECORD'
2022-07-30T07:28:00,964   removing build/bdist.linux-armv7l/wheel
2022-07-30T07:28:01,303   Building wheel for frag-pele (setup.py): finished with status 'done'
2022-07-30T07:28:01,315   Created wheel for frag-pele: filename=frag_pele-3.1.3-py3-none-any.whl size=185140 sha256=f90dd9e42465039b6c71ff6cbee5a10d12aa624692b3a90f567dbf6d0f7ba5fd
2022-07-30T07:28:01,317   Stored in directory: /tmp/pip-ephem-wheel-cache-0t9_ksuf/wheels/83/75/57/3c17de46e3527702e1dbb77bacf0935e2ca992bcbba5d5bde2
2022-07-30T07:28:01,344 Successfully built frag-pele
2022-07-30T07:28:01,365 Removed build tracker: '/tmp/pip-build-tracker-q48sfl7r'