2022-08-02T14:45:37,417 Created temporary directory: /tmp/pip-ephem-wheel-cache-hqzmewa1
2022-08-02T14:45:37,422 Created temporary directory: /tmp/pip-build-tracker-lmyqhel7
2022-08-02T14:45:37,423 Initialized build tracking at /tmp/pip-build-tracker-lmyqhel7
2022-08-02T14:45:37,423 Created build tracker: /tmp/pip-build-tracker-lmyqhel7
2022-08-02T14:45:37,424 Entered build tracker: /tmp/pip-build-tracker-lmyqhel7
2022-08-02T14:45:37,425 Created temporary directory: /tmp/pip-wheel-_8g49mek
2022-08-02T14:45:37,493 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-08-02T14:45:37,502 2 location(s) to search for versions of liftofftools:
2022-08-02T14:45:37,502 * https://pypi.org/simple/liftofftools/
2022-08-02T14:45:37,502 * https://www.piwheels.org/simple/liftofftools/
2022-08-02T14:45:37,503 Fetching project page and analyzing links: https://pypi.org/simple/liftofftools/
2022-08-02T14:45:37,504 Getting page https://pypi.org/simple/liftofftools/
2022-08-02T14:45:37,507 Found index url https://pypi.org/simple
2022-08-02T14:45:37,720   Found link https://files.pythonhosted.org/packages/64/e4/dbd9d0b263ed1cb3125bc8710bd6257bea8a5e408b63d24d93cc6a96f0a4/LiftoffTools-0.3.0.tar.gz#sha256=f36d1eba4cbe3c9cd4ecd568fa9eabb6cbea1c17a19a00db1b79f66a6b276feb (from https://pypi.org/simple/liftofftools/) (requires-python:>=3.6), version: 0.3.0
2022-08-02T14:45:37,721   Found link https://files.pythonhosted.org/packages/5b/b0/05822a17173cebb88ff33b76ebe9cc84b6086432abb91824d6c8ba5a649e/LiftoffTools-0.3.1.tar.gz#sha256=91c82cca5674cdb46025aa0defb966f855deeaa947dc5bbee3eb5201b589c278 (from https://pypi.org/simple/liftofftools/) (requires-python:>=3.6), version: 0.3.1
2022-08-02T14:45:37,723   Found link https://files.pythonhosted.org/packages/ea/78/76f1304aa56278bdf985dc5bd49c89f213ac2c647275feaef380608f12fa/LiftoffTools-0.4.tar.gz#sha256=4d153344238e27048447d726623ac6f9e2adcb54451b619ac5c8673dbaba64c4 (from https://pypi.org/simple/liftofftools/) (requires-python:>=3.6), version: 0.4
2022-08-02T14:45:37,724   Found link https://files.pythonhosted.org/packages/7d/d4/e08037d9ea4722890c29741846507b86ee5a222cfac388b4298300c97e3c/LiftoffTools-0.4.1.tar.gz#sha256=1a74f60f99b5c0395d032504704713a9cc9e0805b74d8b1e2beac4a074d04357 (from https://pypi.org/simple/liftofftools/) (requires-python:>=3.6), version: 0.4.1
2022-08-02T14:45:37,726   Found link https://files.pythonhosted.org/packages/d9/72/5c953331024dcb2ca13f3fc2584ebaa7b96acc24bd435a4119f5067dd36a/LiftoffTools-0.4.2.tar.gz#sha256=a0ca8b5384e67dc37be6f5c931142c4174f414becc6818754538e31e347795e2 (from https://pypi.org/simple/liftofftools/) (requires-python:>=3.6), version: 0.4.2
2022-08-02T14:45:37,727   Found link https://files.pythonhosted.org/packages/76/68/e32c47499084db2c92780aaa1cc1d55a754c94cc3ca274f51184575d7c39/LiftoffTools-0.4.3.tar.gz#sha256=d2717bb653e60d4548204a6e11e519ffd7e9ada5b5e5feec8abe2d1e9f1b9c5f (from https://pypi.org/simple/liftofftools/) (requires-python:>=3.6), version: 0.4.3
2022-08-02T14:45:37,728 Fetching project page and analyzing links: https://www.piwheels.org/simple/liftofftools/
2022-08-02T14:45:37,729 Getting page https://www.piwheels.org/simple/liftofftools/
2022-08-02T14:45:37,731 Found index url https://www.piwheels.org/simple
2022-08-02T14:45:38,013   Skipping link: No binaries permitted for liftofftools: https://www.piwheels.org/simple/liftofftools/LiftoffTools-0.4.1-py3-none-any.whl#sha256=8f66eeb3911ec224668edb179e9a25ee769d032d4a44cb1c3dc1037df7c6fb57 (from https://www.piwheels.org/simple/liftofftools/) (requires-python:>=3.6)
2022-08-02T14:45:38,014   Skipping link: No binaries permitted for liftofftools: https://www.piwheels.org/simple/liftofftools/LiftoffTools-0.4-py3-none-any.whl#sha256=a4132a138386e47dd5016defc9d8331fbe6a801edd3da6ce29214d6587b6d2eb (from https://www.piwheels.org/simple/liftofftools/) (requires-python:>=3.6)
2022-08-02T14:45:38,015   Skipping link: No binaries permitted for liftofftools: https://www.piwheels.org/simple/liftofftools/LiftoffTools-0.3.1-py3-none-any.whl#sha256=27209759ac60f195ffa4379f4930b89fb066f41a7be568ed8418b24183e6ea82 (from https://www.piwheels.org/simple/liftofftools/) (requires-python:>=3.6)
2022-08-02T14:45:38,015   Skipping link: No binaries permitted for liftofftools: https://www.piwheels.org/simple/liftofftools/LiftoffTools-0.3.0-py3-none-any.whl#sha256=feeceae87ffc8bdc4077f56d6f9a59de79f2e5bdccea7c71ad41e890991a3797 (from https://www.piwheels.org/simple/liftofftools/) (requires-python:>=3.6)
2022-08-02T14:45:38,016 Skipping link: not a file: https://www.piwheels.org/simple/liftofftools/
2022-08-02T14:45:38,016 Skipping link: not a file: https://pypi.org/simple/liftofftools/
2022-08-02T14:45:38,052 Given no hashes to check 1 links for project 'liftofftools': discarding no candidates
2022-08-02T14:45:38,083 Collecting liftofftools==0.4.2
2022-08-02T14:45:38,088   Created temporary directory: /tmp/pip-unpack-1dj4vb5o
2022-08-02T14:45:38,312   Downloading LiftoffTools-0.4.2.tar.gz (17 kB)
2022-08-02T14:45:38,461   Added liftofftools==0.4.2 from https://files.pythonhosted.org/packages/d9/72/5c953331024dcb2ca13f3fc2584ebaa7b96acc24bd435a4119f5067dd36a/LiftoffTools-0.4.2.tar.gz#sha256=a0ca8b5384e67dc37be6f5c931142c4174f414becc6818754538e31e347795e2 to build tracker '/tmp/pip-build-tracker-lmyqhel7'
2022-08-02T14:45:38,463   Running setup.py (path:/tmp/pip-wheel-_8g49mek/liftofftools_1370c06c26c64a90ac20a79d9bce8dd4/setup.py) egg_info for package liftofftools
2022-08-02T14:45:38,465   Created temporary directory: /tmp/pip-pip-egg-info-kryd8uap
2022-08-02T14:45:38,466   Preparing metadata (setup.py): started
2022-08-02T14:45:38,468   Running command python setup.py egg_info
2022-08-02T14:45:45,821   running egg_info
2022-08-02T14:45:45,825   creating /tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info
2022-08-02T14:45:46,488   writing /tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/PKG-INFO
2022-08-02T14:45:47,079   writing dependency_links to /tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/dependency_links.txt
2022-08-02T14:45:48,849   writing entry points to /tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/entry_points.txt
2022-08-02T14:45:50,028   writing requirements to /tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/requires.txt
2022-08-02T14:45:50,619   writing top-level names to /tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/top_level.txt
2022-08-02T14:45:50,622   writing manifest file '/tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/SOURCES.txt'
2022-08-02T14:45:51,460   reading manifest file '/tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/SOURCES.txt'
2022-08-02T14:45:51,469   writing manifest file '/tmp/pip-pip-egg-info-kryd8uap/LiftoffTools.egg-info/SOURCES.txt'
2022-08-02T14:45:51,685   Preparing metadata (setup.py): finished with status 'done'
2022-08-02T14:45:51,695   Source in /tmp/pip-wheel-_8g49mek/liftofftools_1370c06c26c64a90ac20a79d9bce8dd4 has version 0.4.2, which satisfies requirement liftofftools==0.4.2 from https://files.pythonhosted.org/packages/d9/72/5c953331024dcb2ca13f3fc2584ebaa7b96acc24bd435a4119f5067dd36a/LiftoffTools-0.4.2.tar.gz#sha256=a0ca8b5384e67dc37be6f5c931142c4174f414becc6818754538e31e347795e2
2022-08-02T14:45:51,698   Removed liftofftools==0.4.2 from https://files.pythonhosted.org/packages/d9/72/5c953331024dcb2ca13f3fc2584ebaa7b96acc24bd435a4119f5067dd36a/LiftoffTools-0.4.2.tar.gz#sha256=a0ca8b5384e67dc37be6f5c931142c4174f414becc6818754538e31e347795e2 from build tracker '/tmp/pip-build-tracker-lmyqhel7'
2022-08-02T14:45:51,710 Created temporary directory: /tmp/pip-unpack-_b9e9_un
2022-08-02T14:45:51,711 Building wheels for collected packages: liftofftools
2022-08-02T14:45:51,721   Created temporary directory: /tmp/pip-wheel-r95wb2dp
2022-08-02T14:45:51,722   Building wheel for liftofftools (setup.py): started
2022-08-02T14:45:51,724   Destination directory: /tmp/pip-wheel-r95wb2dp
2022-08-02T14:45:51,724   Running command python setup.py bdist_wheel
2022-08-02T14:45:58,612   running bdist_wheel
2022-08-02T14:45:59,983   running build
2022-08-02T14:45:59,984   running build_py
2022-08-02T14:46:00,658   creating build
2022-08-02T14:46:00,658   creating build/lib
2022-08-02T14:46:00,660   creating build/lib/liftofftools
2022-08-02T14:46:00,662   copying liftofftools/alignment.py -> build/lib/liftofftools
2022-08-02T14:46:00,666   copying liftofftools/__init__.py -> build/lib/liftofftools
2022-08-02T14:46:00,669   copying liftofftools/filepaths.py -> build/lib/liftofftools
2022-08-02T14:46:00,673   copying liftofftools/build_database.py -> build/lib/liftofftools
2022-08-02T14:46:00,676   copying liftofftools/cli_arguments.py -> build/lib/liftofftools
2022-08-02T14:46:00,680   copying liftofftools/annotation.py -> build/lib/liftofftools
2022-08-02T14:46:00,684   copying liftofftools/subprocesses.py -> build/lib/liftofftools
2022-08-02T14:46:00,688   copying liftofftools/liftofftools.py -> build/lib/liftofftools
2022-08-02T14:46:00,692   copying liftofftools/sequences.py -> build/lib/liftofftools
2022-08-02T14:46:00,697   creating build/lib/liftofftools/cluster_analysis
2022-08-02T14:46:00,699   copying liftofftools/cluster_analysis/__init__.py -> build/lib/liftofftools/cluster_analysis
2022-08-02T14:46:00,703   copying liftofftools/cluster_analysis/analyze_clusters.py -> build/lib/liftofftools/cluster_analysis
2022-08-02T14:46:00,707   copying liftofftools/cluster_analysis/mmseqs_workflow.py -> build/lib/liftofftools/cluster_analysis
2022-08-02T14:46:00,710   copying liftofftools/cluster_analysis/clusters.py -> build/lib/liftofftools/cluster_analysis
2022-08-02T14:46:00,715   creating build/lib/liftofftools/variants
2022-08-02T14:46:00,716   copying liftofftools/variants/__init__.py -> build/lib/liftofftools/variants
2022-08-02T14:46:00,719   copying liftofftools/variants/variants.py -> build/lib/liftofftools/variants
2022-08-02T14:46:00,725   creating build/lib/liftofftools/tests
2022-08-02T14:46:00,726   copying liftofftools/tests/test_all.py -> build/lib/liftofftools/tests
2022-08-02T14:46:00,729   copying liftofftools/tests/__init__.py -> build/lib/liftofftools/tests
2022-08-02T14:46:00,733   creating build/lib/liftofftools/synteny
2022-08-02T14:46:00,735   copying liftofftools/synteny/__init__.py -> build/lib/liftofftools/synteny
2022-08-02T14:46:00,738   copying liftofftools/synteny/synteny.py -> build/lib/liftofftools/synteny
2022-08-02T14:46:00,742   copying liftofftools/synteny/plot_gene_order.py -> build/lib/liftofftools/synteny
2022-08-02T14:46:01,485   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-08-02T14:46:01,486     setuptools.SetuptoolsDeprecationWarning,
2022-08-02T14:46:02,155   installing to build/bdist.linux-armv7l/wheel
2022-08-02T14:46:02,155   running install
2022-08-02T14:46:02,217   running install_lib
2022-08-02T14:46:02,889   creating build/bdist.linux-armv7l
2022-08-02T14:46:02,890   creating build/bdist.linux-armv7l/wheel
2022-08-02T14:46:02,893   creating build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,895   copying build/lib/liftofftools/alignment.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,900   creating build/bdist.linux-armv7l/wheel/liftofftools/cluster_analysis
2022-08-02T14:46:02,901   copying build/lib/liftofftools/cluster_analysis/__init__.py -> build/bdist.linux-armv7l/wheel/liftofftools/cluster_analysis
2022-08-02T14:46:02,905   copying build/lib/liftofftools/cluster_analysis/analyze_clusters.py -> build/bdist.linux-armv7l/wheel/liftofftools/cluster_analysis
2022-08-02T14:46:02,909   copying build/lib/liftofftools/cluster_analysis/mmseqs_workflow.py -> build/bdist.linux-armv7l/wheel/liftofftools/cluster_analysis
2022-08-02T14:46:02,913   copying build/lib/liftofftools/cluster_analysis/clusters.py -> build/bdist.linux-armv7l/wheel/liftofftools/cluster_analysis
2022-08-02T14:46:02,916   copying build/lib/liftofftools/__init__.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,920   copying build/lib/liftofftools/filepaths.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,923   copying build/lib/liftofftools/build_database.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,927   copying build/lib/liftofftools/cli_arguments.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,930   copying build/lib/liftofftools/annotation.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,935   creating build/bdist.linux-armv7l/wheel/liftofftools/variants
2022-08-02T14:46:02,937   copying build/lib/liftofftools/variants/__init__.py -> build/bdist.linux-armv7l/wheel/liftofftools/variants
2022-08-02T14:46:02,940   copying build/lib/liftofftools/variants/variants.py -> build/bdist.linux-armv7l/wheel/liftofftools/variants
2022-08-02T14:46:02,946   creating build/bdist.linux-armv7l/wheel/liftofftools/tests
2022-08-02T14:46:02,947   copying build/lib/liftofftools/tests/test_all.py -> build/bdist.linux-armv7l/wheel/liftofftools/tests
2022-08-02T14:46:02,951   copying build/lib/liftofftools/tests/__init__.py -> build/bdist.linux-armv7l/wheel/liftofftools/tests
2022-08-02T14:46:02,955   creating build/bdist.linux-armv7l/wheel/liftofftools/synteny
2022-08-02T14:46:02,956   copying build/lib/liftofftools/synteny/__init__.py -> build/bdist.linux-armv7l/wheel/liftofftools/synteny
2022-08-02T14:46:02,960   copying build/lib/liftofftools/synteny/synteny.py -> build/bdist.linux-armv7l/wheel/liftofftools/synteny
2022-08-02T14:46:02,965   copying build/lib/liftofftools/synteny/plot_gene_order.py -> build/bdist.linux-armv7l/wheel/liftofftools/synteny
2022-08-02T14:46:02,969   copying build/lib/liftofftools/subprocesses.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,973   copying build/lib/liftofftools/liftofftools.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,977   copying build/lib/liftofftools/sequences.py -> build/bdist.linux-armv7l/wheel/liftofftools
2022-08-02T14:46:02,980   running install_egg_info
2022-08-02T14:46:04,349   running egg_info
2022-08-02T14:46:05,012   writing LiftoffTools.egg-info/PKG-INFO
2022-08-02T14:46:05,607   writing dependency_links to LiftoffTools.egg-info/dependency_links.txt
2022-08-02T14:46:07,379   writing entry points to LiftoffTools.egg-info/entry_points.txt
2022-08-02T14:46:08,561   writing requirements to LiftoffTools.egg-info/requires.txt
2022-08-02T14:46:09,155   writing top-level names to LiftoffTools.egg-info/top_level.txt
2022-08-02T14:46:09,242   reading manifest file 'LiftoffTools.egg-info/SOURCES.txt'
2022-08-02T14:46:09,253   writing manifest file 'LiftoffTools.egg-info/SOURCES.txt'
2022-08-02T14:46:09,255   Copying LiftoffTools.egg-info to build/bdist.linux-armv7l/wheel/LiftoffTools-0.4.2-py3.7.egg-info
2022-08-02T14:46:09,277   running install_scripts
2022-08-02T14:46:09,444   creating build/bdist.linux-armv7l/wheel/LiftoffTools-0.4.2.dist-info/WHEEL
2022-08-02T14:46:09,448   creating '/tmp/pip-wheel-r95wb2dp/LiftoffTools-0.4.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-08-02T14:46:09,455   adding 'liftofftools/__init__.py'
2022-08-02T14:46:09,457   adding 'liftofftools/alignment.py'
2022-08-02T14:46:09,461   adding 'liftofftools/annotation.py'
2022-08-02T14:46:09,463   adding 'liftofftools/build_database.py'
2022-08-02T14:46:09,465   adding 'liftofftools/cli_arguments.py'
2022-08-02T14:46:09,468   adding 'liftofftools/filepaths.py'
2022-08-02T14:46:09,470   adding 'liftofftools/liftofftools.py'
2022-08-02T14:46:09,473   adding 'liftofftools/sequences.py'
2022-08-02T14:46:09,475   adding 'liftofftools/subprocesses.py'
2022-08-02T14:46:09,479   adding 'liftofftools/cluster_analysis/__init__.py'
2022-08-02T14:46:09,482   adding 'liftofftools/cluster_analysis/analyze_clusters.py'
2022-08-02T14:46:09,485   adding 'liftofftools/cluster_analysis/clusters.py'
2022-08-02T14:46:09,487   adding 'liftofftools/cluster_analysis/mmseqs_workflow.py'
2022-08-02T14:46:09,490   adding 'liftofftools/synteny/__init__.py'
2022-08-02T14:46:09,493   adding 'liftofftools/synteny/plot_gene_order.py'
2022-08-02T14:46:09,496   adding 'liftofftools/synteny/synteny.py'
2022-08-02T14:46:09,500   adding 'liftofftools/tests/__init__.py'
2022-08-02T14:46:09,502   adding 'liftofftools/tests/test_all.py'
2022-08-02T14:46:09,506   adding 'liftofftools/variants/__init__.py'
2022-08-02T14:46:09,508   adding 'liftofftools/variants/variants.py'
2022-08-02T14:46:09,510   adding 'LiftoffTools-0.4.2.dist-info/METADATA'
2022-08-02T14:46:09,512   adding 'LiftoffTools-0.4.2.dist-info/WHEEL'
2022-08-02T14:46:09,514   adding 'LiftoffTools-0.4.2.dist-info/entry_points.txt'
2022-08-02T14:46:09,516   adding 'LiftoffTools-0.4.2.dist-info/top_level.txt'
2022-08-02T14:46:09,518   adding 'LiftoffTools-0.4.2.dist-info/RECORD'
2022-08-02T14:46:09,521   removing build/bdist.linux-armv7l/wheel
2022-08-02T14:46:09,794   Building wheel for liftofftools (setup.py): finished with status 'done'
2022-08-02T14:46:09,802   Created wheel for liftofftools: filename=LiftoffTools-0.4.2-py3-none-any.whl size=19149 sha256=bd217473d81335b9893dc325609017f56455216e904f47e41de613d2f3088193
2022-08-02T14:46:09,804   Stored in directory: /tmp/pip-ephem-wheel-cache-hqzmewa1/wheels/d2/c0/f3/5069adba7416dbe98e983c044a008a64f2344d70cc6e7cd550
2022-08-02T14:46:09,831 Successfully built liftofftools
2022-08-02T14:46:09,839 Removed build tracker: '/tmp/pip-build-tracker-lmyqhel7'