2022-08-04T10:06:10,327 Created temporary directory: /tmp/pip-ephem-wheel-cache-149dk9eb 2022-08-04T10:06:10,333 Created temporary directory: /tmp/pip-build-tracker-55e1l_qu 2022-08-04T10:06:10,333 Initialized build tracking at /tmp/pip-build-tracker-55e1l_qu 2022-08-04T10:06:10,334 Created build tracker: /tmp/pip-build-tracker-55e1l_qu 2022-08-04T10:06:10,334 Entered build tracker: /tmp/pip-build-tracker-55e1l_qu 2022-08-04T10:06:10,335 Created temporary directory: /tmp/pip-wheel-ymjuo1uf 2022-08-04T10:06:10,403 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-04T10:06:10,412 2 location(s) to search for versions of ukat: 2022-08-04T10:06:10,412 * https://pypi.org/simple/ukat/ 2022-08-04T10:06:10,412 * https://www.piwheels.org/simple/ukat/ 2022-08-04T10:06:10,413 Fetching project page and analyzing links: https://pypi.org/simple/ukat/ 2022-08-04T10:06:10,414 Getting page https://pypi.org/simple/ukat/ 2022-08-04T10:06:10,417 Found index url https://pypi.org/simple 2022-08-04T10:06:10,539 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,541 Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz#sha256=25a9c52f7cfffe0200540cb1d58dedf44179895a1497eb5734f2d9b6eb1bcb10 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2 2022-08-04T10:06:10,542 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,544 Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz#sha256=8ef8bd041fd890a7ee675fef6147b5ffcc28035c5610521700d7388588b4af5c (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1 2022-08-04T10:06:10,544 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,546 Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz#sha256=a8b5320f2573ed8bab957ce0586e31d93bcb35b37ba1c67a015daacfff9dbe72 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2 2022-08-04T10:06:10,547 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,548 Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz#sha256=6196c64a7222252aaa28439335953207e99a1fa626faa3798bac45d538ab28ea (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0 2022-08-04T10:06:10,549 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl#sha256=b3fc505ef43643236b13eca125d09ec7accfde740c67784b6d01e40612c0b001 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,551 Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz#sha256=c67be1f753fa1ae71c9a0906f9f8155a2f8ce134f5443ad0cbca5786c0ea9587 (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0 2022-08-04T10:06:10,551 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl#sha256=180dbbd1ce63be5e98d0f05e44410efd3ea1dfb0a1961ab6ea35c6dbee31a7c8 (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-08-04T10:06:10,553 Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz#sha256=f0636443684c047882b6770105e20b8a872b25206ca6d268a0ae5508c1c9d6cb (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0 2022-08-04T10:06:10,554 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl#sha256=b9f59a9574c92592553614dd2ce0ac3b394fa62325c2da815f799ca42de488cc (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-08-04T10:06:10,555 Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz#sha256=84694c2608c74bc3771b8586cc1ee18bf8d807a29f4ef95d570aff06f2202e0d (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0 2022-08-04T10:06:10,556 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4b/22/cc8a211608efaad7ee71fa6409ec13fc59ed8edf4c7d2d1a06dd2d70e036/ukat-0.6.1-py3-none-any.whl#sha256=2fe0545ba62a8121d057c04a2af86d80b17deba1145f49d9f461ab287cb4918a (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-08-04T10:06:10,557 Found link https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz#sha256=d21ea405048855f2b288f2dcea8936ef07c5aa45e69ddf1e385bb90a785bed9b (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.1 2022-08-04T10:06:10,558 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/ 2022-08-04T10:06:10,559 Getting page https://www.piwheels.org/simple/ukat/ 2022-08-04T10:06:10,561 Found index url https://www.piwheels.org/simple 2022-08-04T10:06:10,785 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.0-py3-none-any.whl#sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-08-04T10:06:10,786 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-08-04T10:06:10,787 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,787 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,788 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,788 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,789 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-08-04T10:06:10,789 Skipping link: not a file: https://www.piwheels.org/simple/ukat/ 2022-08-04T10:06:10,790 Skipping link: not a file: https://pypi.org/simple/ukat/ 2022-08-04T10:06:10,837 Given no hashes to check 1 links for project 'ukat': discarding no candidates 2022-08-04T10:06:10,879 Collecting ukat==0.6.1 2022-08-04T10:06:10,883 Created temporary directory: /tmp/pip-unpack-wf3n2xeg 2022-08-04T10:06:10,975 Downloading ukat-0.6.1.tar.gz (70 kB) 2022-08-04T10:06:11,308 Added ukat==0.6.1 from https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz#sha256=d21ea405048855f2b288f2dcea8936ef07c5aa45e69ddf1e385bb90a785bed9b to build tracker '/tmp/pip-build-tracker-55e1l_qu' 2022-08-04T10:06:11,311 Running setup.py (path:/tmp/pip-wheel-ymjuo1uf/ukat_aac3f76f94334435b7887103c497f761/setup.py) egg_info for package ukat 2022-08-04T10:06:11,312 Created temporary directory: /tmp/pip-pip-egg-info-fnsk544r 2022-08-04T10:06:11,313 Preparing metadata (setup.py): started 2022-08-04T10:06:11,315 Running command python setup.py egg_info 2022-08-04T10:06:18,642 running egg_info 2022-08-04T10:06:18,646 creating /tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info 2022-08-04T10:06:19,299 writing /tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/PKG-INFO 2022-08-04T10:06:19,861 writing dependency_links to /tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/dependency_links.txt 2022-08-04T10:06:22,652 writing requirements to /tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/requires.txt 2022-08-04T10:06:23,210 writing top-level names to /tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/top_level.txt 2022-08-04T10:06:23,212 writing manifest file '/tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/SOURCES.txt' 2022-08-04T10:06:24,093 reading manifest file '/tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/SOURCES.txt' 2022-08-04T10:06:24,096 reading manifest template 'MANIFEST.in' 2022-08-04T10:06:24,126 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-08-04T10:06:24,127 no previously-included directories found matching 'doc' 2022-08-04T10:06:24,128 no previously-included directories found matching 'experiments' 2022-08-04T10:06:24,128 adding license file 'LICENSE' 2022-08-04T10:06:24,136 writing manifest file '/tmp/pip-pip-egg-info-fnsk544r/ukat.egg-info/SOURCES.txt' 2022-08-04T10:06:24,342 Preparing metadata (setup.py): finished with status 'done' 2022-08-04T10:06:24,353 Source in /tmp/pip-wheel-ymjuo1uf/ukat_aac3f76f94334435b7887103c497f761 has version 0.6.1, which satisfies requirement ukat==0.6.1 from https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz#sha256=d21ea405048855f2b288f2dcea8936ef07c5aa45e69ddf1e385bb90a785bed9b 2022-08-04T10:06:24,356 Removed ukat==0.6.1 from https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz#sha256=d21ea405048855f2b288f2dcea8936ef07c5aa45e69ddf1e385bb90a785bed9b from build tracker '/tmp/pip-build-tracker-55e1l_qu' 2022-08-04T10:06:24,370 Created temporary directory: /tmp/pip-unpack-p5_qbuqh 2022-08-04T10:06:24,371 Building wheels for collected packages: ukat 2022-08-04T10:06:24,381 Created temporary directory: /tmp/pip-wheel-zlve60pd 2022-08-04T10:06:24,381 Building wheel for ukat (setup.py): started 2022-08-04T10:06:24,383 Destination directory: /tmp/pip-wheel-zlve60pd 2022-08-04T10:06:24,384 Running command python setup.py bdist_wheel 2022-08-04T10:06:31,379 running bdist_wheel 2022-08-04T10:06:32,794 running build 2022-08-04T10:06:32,795 running build_py 2022-08-04T10:06:33,475 creating build 2022-08-04T10:06:33,476 creating build/lib 2022-08-04T10:06:33,477 creating build/lib/ukat 2022-08-04T10:06:33,479 copying ukat/__init__.py -> build/lib/ukat 2022-08-04T10:06:33,484 creating build/lib/ukat/data 2022-08-04T10:06:33,486 copying ukat/data/__init__.py -> build/lib/ukat/data 2022-08-04T10:06:33,489 copying ukat/data/fetch.py -> build/lib/ukat/data 2022-08-04T10:06:33,498 creating build/lib/ukat/mapping 2022-08-04T10:06:33,500 copying ukat/mapping/mtr.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,504 copying ukat/mapping/t2.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,509 copying ukat/mapping/t1.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,514 copying ukat/mapping/b0.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,518 copying ukat/mapping/__init__.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,521 copying ukat/mapping/t2star.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,526 copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping 2022-08-04T10:06:33,532 creating build/lib/ukat/qa 2022-08-04T10:06:33,533 copying ukat/qa/__init__.py -> build/lib/ukat/qa 2022-08-04T10:06:33,537 copying ukat/qa/snr.py -> build/lib/ukat/qa 2022-08-04T10:06:33,542 creating build/lib/ukat/segmentation 2022-08-04T10:06:33,543 copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation 2022-08-04T10:06:33,547 copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation 2022-08-04T10:06:33,552 creating build/lib/ukat/vessels 2022-08-04T10:06:33,553 copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels 2022-08-04T10:06:33,558 copying ukat/vessels/__init__.py -> build/lib/ukat/vessels 2022-08-04T10:06:33,562 creating build/lib/ukat/utils 2022-08-04T10:06:33,564 copying ukat/utils/siemens.py -> build/lib/ukat/utils 2022-08-04T10:06:33,568 copying ukat/utils/arraystats.py -> build/lib/ukat/utils 2022-08-04T10:06:33,573 copying ukat/utils/tools.py -> build/lib/ukat/utils 2022-08-04T10:06:33,577 copying ukat/utils/__init__.py -> build/lib/ukat/utils 2022-08-04T10:06:33,582 creating build/lib/ukat/data/tests 2022-08-04T10:06:33,583 copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests 2022-08-04T10:06:33,588 copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests 2022-08-04T10:06:33,593 creating build/lib/ukat/mapping/tests 2022-08-04T10:06:33,594 copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,599 copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,603 copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,607 copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,612 copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,616 copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,622 copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests 2022-08-04T10:06:33,628 creating build/lib/ukat/qa/tests 2022-08-04T10:06:33,629 copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests 2022-08-04T10:06:33,634 copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests 2022-08-04T10:06:33,639 creating build/lib/ukat/segmentation/tests 2022-08-04T10:06:33,641 copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests 2022-08-04T10:06:33,645 copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests 2022-08-04T10:06:33,650 creating build/lib/ukat/vessels/tests 2022-08-04T10:06:33,651 copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests 2022-08-04T10:06:33,656 copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests 2022-08-04T10:06:33,661 creating build/lib/ukat/utils/tests 2022-08-04T10:06:33,663 copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests 2022-08-04T10:06:33,668 copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests 2022-08-04T10:06:33,672 copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests 2022-08-04T10:06:33,676 copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests 2022-08-04T10:06:33,679 running egg_info 2022-08-04T10:06:35,074 writing ukat.egg-info/PKG-INFO 2022-08-04T10:06:35,640 writing dependency_links to ukat.egg-info/dependency_links.txt 2022-08-04T10:06:38,456 writing requirements to ukat.egg-info/requires.txt 2022-08-04T10:06:39,019 writing top-level names to ukat.egg-info/top_level.txt 2022-08-04T10:06:39,139 reading manifest file 'ukat.egg-info/SOURCES.txt' 2022-08-04T10:06:39,146 reading manifest template 'MANIFEST.in' 2022-08-04T10:06:39,198 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-08-04T10:06:39,199 no previously-included directories found matching 'doc' 2022-08-04T10:06:39,200 no previously-included directories found matching 'experiments' 2022-08-04T10:06:39,201 adding license file 'LICENSE' 2022-08-04T10:06:39,209 writing manifest file 'ukat.egg-info/SOURCES.txt' 2022-08-04T10:06:39,214 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-04T10:06:39,215 ############################ 2022-08-04T10:06:39,215 # Package would be ignored # 2022-08-04T10:06:39,216 ############################ 2022-08-04T10:06:39,216 Python recognizes 'ukat.utils.tests.test_data' as an importable package, however it is 2022-08-04T10:06:39,216 included in the distribution as "data". 2022-08-04T10:06:39,216 This behavior is likely to change in future versions of setuptools (and 2022-08-04T10:06:39,217 therefore is considered deprecated). 2022-08-04T10:06:39,218 Please make sure that 'ukat.utils.tests.test_data' is included as a package by using 2022-08-04T10:06:39,218 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-04T10:06:39,219 You can read more about "package discovery" and "data files" on setuptools 2022-08-04T10:06:39,219 documentation page. 2022-08-04T10:06:39,220 !! 2022-08-04T10:06:39,220 check.warn(importable) 2022-08-04T10:06:39,221 creating build/lib/ukat/utils/tests/test_data 2022-08-04T10:06:39,221 copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data 2022-08-04T10:06:39,224 copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data 2022-08-04T10:06:39,228 copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data 2022-08-04T10:06:39,910 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-08-04T10:06:39,910 warnings.warn( 2022-08-04T10:06:40,571 installing to build/bdist.linux-armv7l/wheel 2022-08-04T10:06:40,571 running install 2022-08-04T10:06:40,632 running install_lib 2022-08-04T10:06:41,294 creating build/bdist.linux-armv7l 2022-08-04T10:06:41,295 creating build/bdist.linux-armv7l/wheel 2022-08-04T10:06:41,298 creating build/bdist.linux-armv7l/wheel/ukat 2022-08-04T10:06:41,300 creating build/bdist.linux-armv7l/wheel/ukat/data 2022-08-04T10:06:41,302 copying build/lib/ukat/data/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data 2022-08-04T10:06:41,306 copying build/lib/ukat/data/fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data 2022-08-04T10:06:41,313 creating build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-08-04T10:06:41,315 copying build/lib/ukat/data/tests/test_fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-08-04T10:06:41,320 copying build/lib/ukat/data/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-08-04T10:06:41,324 creating build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,326 copying build/lib/ukat/mapping/mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,330 copying build/lib/ukat/mapping/t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,335 copying build/lib/ukat/mapping/t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,340 copying build/lib/ukat/mapping/b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,344 copying build/lib/ukat/mapping/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,348 copying build/lib/ukat/mapping/t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,352 copying build/lib/ukat/mapping/diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-08-04T10:06:41,358 creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,360 copying build/lib/ukat/mapping/tests/test_t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,365 copying build/lib/ukat/mapping/tests/test_mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,369 copying build/lib/ukat/mapping/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,372 copying build/lib/ukat/mapping/tests/test_diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,377 copying build/lib/ukat/mapping/tests/test_b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,381 copying build/lib/ukat/mapping/tests/test_t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,386 copying build/lib/ukat/mapping/tests/test_t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-08-04T10:06:41,392 creating build/bdist.linux-armv7l/wheel/ukat/qa 2022-08-04T10:06:41,393 copying build/lib/ukat/qa/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2022-08-04T10:06:41,397 copying build/lib/ukat/qa/snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2022-08-04T10:06:41,402 creating build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-08-04T10:06:41,403 copying build/lib/ukat/qa/tests/test_snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-08-04T10:06:41,408 copying build/lib/ukat/qa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-08-04T10:06:41,412 copying build/lib/ukat/__init__.py -> build/bdist.linux-armv7l/wheel/ukat 2022-08-04T10:06:41,416 creating build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-08-04T10:06:41,418 copying build/lib/ukat/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-08-04T10:06:41,422 copying build/lib/ukat/segmentation/whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-08-04T10:06:41,426 creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-08-04T10:06:41,428 copying build/lib/ukat/segmentation/tests/test_whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-08-04T10:06:41,432 copying build/lib/ukat/segmentation/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-08-04T10:06:41,436 creating build/bdist.linux-armv7l/wheel/ukat/vessels 2022-08-04T10:06:41,438 copying build/lib/ukat/vessels/phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2022-08-04T10:06:41,443 copying build/lib/ukat/vessels/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2022-08-04T10:06:41,447 creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-08-04T10:06:41,448 copying build/lib/ukat/vessels/tests/test_phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-08-04T10:06:41,454 copying build/lib/ukat/vessels/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-08-04T10:06:41,458 creating build/bdist.linux-armv7l/wheel/ukat/utils 2022-08-04T10:06:41,459 copying build/lib/ukat/utils/siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-08-04T10:06:41,464 copying build/lib/ukat/utils/arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-08-04T10:06:41,469 copying build/lib/ukat/utils/tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-08-04T10:06:41,473 copying build/lib/ukat/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-08-04T10:06:41,477 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-08-04T10:06:41,479 copying build/lib/ukat/utils/tests/test_arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-08-04T10:06:41,484 copying build/lib/ukat/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-08-04T10:06:41,488 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-08-04T10:06:41,490 copying build/lib/ukat/utils/tests/test_data/expected_from_txt.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-08-04T10:06:41,494 copying build/lib/ukat/utils/tests/test_data/diffusion_scheme.txt -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-08-04T10:06:41,498 copying build/lib/ukat/utils/tests/test_data/expected_from_str.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-08-04T10:06:41,501 copying build/lib/ukat/utils/tests/test_tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-08-04T10:06:41,506 copying build/lib/ukat/utils/tests/test_siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-08-04T10:06:41,509 running install_egg_info 2022-08-04T10:06:42,180 Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.6.1-py3.9.egg-info 2022-08-04T10:06:42,202 running install_scripts 2022-08-04T10:06:42,395 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-04T10:06:42,406 creating build/bdist.linux-armv7l/wheel/ukat-0.6.1.dist-info/WHEEL 2022-08-04T10:06:42,411 creating '/tmp/pip-wheel-zlve60pd/ukat-0.6.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-04T10:06:42,417 adding 'ukat/__init__.py' 2022-08-04T10:06:42,421 adding 'ukat/data/__init__.py' 2022-08-04T10:06:42,429 adding 'ukat/data/fetch.py' 2022-08-04T10:06:42,433 adding 'ukat/data/tests/__init__.py' 2022-08-04T10:06:42,436 adding 'ukat/data/tests/test_fetch.py' 2022-08-04T10:06:42,439 adding 'ukat/mapping/__init__.py' 2022-08-04T10:06:42,443 adding 'ukat/mapping/b0.py' 2022-08-04T10:06:42,448 adding 'ukat/mapping/diffusion.py' 2022-08-04T10:06:42,451 adding 'ukat/mapping/mtr.py' 2022-08-04T10:06:42,456 adding 'ukat/mapping/t1.py' 2022-08-04T10:06:42,461 adding 'ukat/mapping/t2.py' 2022-08-04T10:06:42,466 adding 'ukat/mapping/t2star.py' 2022-08-04T10:06:42,470 adding 'ukat/mapping/tests/__init__.py' 2022-08-04T10:06:42,473 adding 'ukat/mapping/tests/test_b0.py' 2022-08-04T10:06:42,477 adding 'ukat/mapping/tests/test_diffusion.py' 2022-08-04T10:06:42,480 adding 'ukat/mapping/tests/test_mtr.py' 2022-08-04T10:06:42,485 adding 'ukat/mapping/tests/test_t1.py' 2022-08-04T10:06:42,488 adding 'ukat/mapping/tests/test_t2.py' 2022-08-04T10:06:42,492 adding 'ukat/mapping/tests/test_t2star.py' 2022-08-04T10:06:42,495 adding 'ukat/qa/__init__.py' 2022-08-04T10:06:42,499 adding 'ukat/qa/snr.py' 2022-08-04T10:06:42,502 adding 'ukat/qa/tests/__init__.py' 2022-08-04T10:06:42,505 adding 'ukat/qa/tests/test_snr.py' 2022-08-04T10:06:42,508 adding 'ukat/segmentation/__init__.py' 2022-08-04T10:06:42,511 adding 'ukat/segmentation/whole_kidney.py' 2022-08-04T10:06:42,514 adding 'ukat/segmentation/tests/__init__.py' 2022-08-04T10:06:42,517 adding 'ukat/segmentation/tests/test_whole_kidney.py' 2022-08-04T10:06:42,520 adding 'ukat/utils/__init__.py' 2022-08-04T10:06:42,524 adding 'ukat/utils/arraystats.py' 2022-08-04T10:06:42,527 adding 'ukat/utils/siemens.py' 2022-08-04T10:06:42,530 adding 'ukat/utils/tools.py' 2022-08-04T10:06:42,533 adding 'ukat/utils/tests/__init__.py' 2022-08-04T10:06:42,538 adding 'ukat/utils/tests/test_arraystats.py' 2022-08-04T10:06:42,541 adding 'ukat/utils/tests/test_siemens.py' 2022-08-04T10:06:42,543 adding 'ukat/utils/tests/test_tools.py' 2022-08-04T10:06:42,547 adding 'ukat/utils/tests/test_data/diffusion_scheme.txt' 2022-08-04T10:06:42,549 adding 'ukat/utils/tests/test_data/expected_from_str.dvs' 2022-08-04T10:06:42,551 adding 'ukat/utils/tests/test_data/expected_from_txt.dvs' 2022-08-04T10:06:42,554 adding 'ukat/vessels/__init__.py' 2022-08-04T10:06:42,558 adding 'ukat/vessels/phase_contrast.py' 2022-08-04T10:06:42,562 adding 'ukat/vessels/tests/__init__.py' 2022-08-04T10:06:42,565 adding 'ukat/vessels/tests/test_phase_contrast.py' 2022-08-04T10:06:42,582 adding 'ukat-0.6.1.dist-info/LICENSE' 2022-08-04T10:06:42,586 adding 'ukat-0.6.1.dist-info/METADATA' 2022-08-04T10:06:42,588 adding 'ukat-0.6.1.dist-info/WHEEL' 2022-08-04T10:06:42,590 adding 'ukat-0.6.1.dist-info/top_level.txt' 2022-08-04T10:06:42,592 adding 'ukat-0.6.1.dist-info/RECORD' 2022-08-04T10:06:42,600 removing build/bdist.linux-armv7l/wheel 2022-08-04T10:06:42,884 Building wheel for ukat (setup.py): finished with status 'done' 2022-08-04T10:06:42,893 Created wheel for ukat: filename=ukat-0.6.1-py3-none-any.whl size=87795 sha256=7d16a51c8a1b641c0e66a07b621739800aeee67a63bca23aae04440ea692a180 2022-08-04T10:06:42,895 Stored in directory: /tmp/pip-ephem-wheel-cache-149dk9eb/wheels/32/87/aa/b30de1b498fe7cfabd9fb86f059b91883b7252882b02d16c37 2022-08-04T10:06:42,924 Successfully built ukat 2022-08-04T10:06:42,939 Removed build tracker: '/tmp/pip-build-tracker-55e1l_qu'