2022-08-04T11:09:25,660 Created temporary directory: /tmp/pip-ephem-wheel-cache-7lks8s3l 2022-08-04T11:09:25,666 Created temporary directory: /tmp/pip-build-tracker-abe_zl5l 2022-08-04T11:09:25,666 Initialized build tracking at /tmp/pip-build-tracker-abe_zl5l 2022-08-04T11:09:25,667 Created build tracker: /tmp/pip-build-tracker-abe_zl5l 2022-08-04T11:09:25,667 Entered build tracker: /tmp/pip-build-tracker-abe_zl5l 2022-08-04T11:09:25,669 Created temporary directory: /tmp/pip-wheel-nhn0zts8 2022-08-04T11:09:25,732 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-04T11:09:25,740 2 location(s) to search for versions of checkm-genome: 2022-08-04T11:09:25,740 * https://pypi.org/simple/checkm-genome/ 2022-08-04T11:09:25,740 * https://www.piwheels.org/simple/checkm-genome/ 2022-08-04T11:09:25,741 Fetching project page and analyzing links: https://pypi.org/simple/checkm-genome/ 2022-08-04T11:09:25,742 Getting page https://pypi.org/simple/checkm-genome/ 2022-08-04T11:09:25,745 Found index url https://pypi.org/simple 2022-08-04T11:09:25,958 Found link https://files.pythonhosted.org/packages/28/18/bfa95eace6e39c78c3d59e9409a6a6bf5d6b8eb02a84fe8f1587a604cccc/checkm-genome-0.9.0.tar.gz#sha256=afdff4dfeb2702dfed0e82a79f47b892ca2a163667d1a3a76941b71eb47f23ab (from https://pypi.org/simple/checkm-genome/), version: 0.9.0 2022-08-04T11:09:25,959 Found link https://files.pythonhosted.org/packages/41/31/d1cbd54a0356a8cfabe59a3d932dc5bfc25c8a62d21e8a6c95ef5ee84a5d/checkm-genome-0.9.1.tar.gz#sha256=7aab3ef510bd9f98643b0ee9d40b39af9317860309025f28b0265617de769156 (from https://pypi.org/simple/checkm-genome/), version: 0.9.1 2022-08-04T11:09:25,959 Found link https://files.pythonhosted.org/packages/af/c9/61e0998688374f8155107e3e81cf8920658b72e2e97df8595beaf6dad498/checkm-genome-0.9.2.tar.gz#sha256=bb967c1332aee95335f68cf18320624229aead5aba1bd3141c3b9ece3acc0227 (from https://pypi.org/simple/checkm-genome/), version: 0.9.2 2022-08-04T11:09:25,960 Found link https://files.pythonhosted.org/packages/ae/51/c5173a5940663f1a25311584f322ccfd22148097eea896f3fe96071292a6/checkm-genome-0.9.4.tar.gz#sha256=60a1f602de2c50143d4a94f5e292963ff30e670f9651dda1253872d05e36d207 (from https://pypi.org/simple/checkm-genome/), version: 0.9.4 2022-08-04T11:09:25,961 Found link https://files.pythonhosted.org/packages/5c/d0/884dcda6dc25ec5b1a0dfb781b67dbf4c9cfbe2ab3ef3935b3d4cbbcd0e3/checkm-genome-0.9.5.tar.gz#sha256=b14743620f849368c2e6de3023de89bec4a45762cd5d579cf4fcd7343ac2a886 (from https://pypi.org/simple/checkm-genome/), version: 0.9.5 2022-08-04T11:09:25,962 Found link https://files.pythonhosted.org/packages/ec/7d/8ffd56d3ea47b908b869e7556f3ed2211bbd0f299ddb8bd34ee34c7cdfb2/checkm-genome-0.9.6.tar.gz#sha256=e91379d5f3ee8eb07e78d2a9b1bb44d7261ba13bc7d4ea87c8aad244b4d34570 (from https://pypi.org/simple/checkm-genome/), version: 0.9.6 2022-08-04T11:09:25,962 Found link https://files.pythonhosted.org/packages/5f/2b/d0283c04c98b60afb23a8e4220f4c99bdb5a5a4fa08e928d1e16cefc8c65/checkm-genome-0.9.7.tar.gz#sha256=c8f62d837a42be69688cb9145974ac15030addb6454a5a2843061672e9081b34 (from https://pypi.org/simple/checkm-genome/), version: 0.9.7 2022-08-04T11:09:25,963 Found link https://files.pythonhosted.org/packages/d4/0b/6b2bbcea9bb373f458ece939f7d999bbeaf47f6562f7a5b459f5b3de0ef0/checkm-genome-1.0.1.tar.gz#sha256=df1bb4217ff7039f901ba38cc92cf7e57a0c63793842bfe4fe618c7bde5c7c63 (from https://pypi.org/simple/checkm-genome/), version: 1.0.1 2022-08-04T11:09:25,964 Found link https://files.pythonhosted.org/packages/de/22/74f9a5f3c6716fb5df55e4ffe32addf3bf972771ee68e41d8b50f65bc45f/checkm-genome-1.0.2.tar.gz#sha256=ef49d0a63fde68fdad74279aa204e8b65cd0a227dca876b2f5b1c261d3c96c39 (from https://pypi.org/simple/checkm-genome/), version: 1.0.2 2022-08-04T11:09:25,965 Found link https://files.pythonhosted.org/packages/0f/28/0c0e639dbdabf29808615ffe781675b8c8376ffc176e3ec9060c53ee99bd/checkm-genome-1.0.3.tar.gz#sha256=c6a6fcc43d4360a37c94d1ec7531179378e55f6dcbe8c045509ff576d15a1e1d (from https://pypi.org/simple/checkm-genome/), version: 1.0.3 2022-08-04T11:09:25,965 Found link https://files.pythonhosted.org/packages/fe/e1/7821a08e9c5462181f4768eff196ceeab5b6cfdf40b09874cd7d42bc733d/checkm-genome-1.0.4.tar.gz#sha256=e036c7ac934de3fae1207f9fae4113cb11c87842b9477e711eba860de22ae773 (from https://pypi.org/simple/checkm-genome/), version: 1.0.4 2022-08-04T11:09:25,966 Found link https://files.pythonhosted.org/packages/d0/17/9442a51f37f3bb6f112b3dc03a6aaaca3417ec5ade8208abbccec7906757/checkm-genome-1.0.5.tar.gz#sha256=e0a08d570b3c46bd6b3d808b153ce87edae10153eef605ba879b131f0001958d (from https://pypi.org/simple/checkm-genome/), version: 1.0.5 2022-08-04T11:09:25,967 Found link https://files.pythonhosted.org/packages/55/62/35b519866fff020ef0b213e0665dc4d43cb1bb588a6575dd3270d3708095/checkm-genome-1.0.7.tar.gz#sha256=8bf038258c5b3429bcbafc1ef666d4a9ad3eaec5784213e41b46c2bdf3b0d00b (from https://pypi.org/simple/checkm-genome/), version: 1.0.7 2022-08-04T11:09:25,968 Found link https://files.pythonhosted.org/packages/e7/d4/18407c20a8f220428e9b2b42c9c5768321060965d790e2861b1a3550ac21/checkm-genome-1.0.8.tar.gz#sha256=9235dcc510139e7cf6350fa08e19c089837230a6fa7e35cf4bd3fa7ae6248ec8 (from https://pypi.org/simple/checkm-genome/), version: 1.0.8 2022-08-04T11:09:25,968 Found link https://files.pythonhosted.org/packages/a1/22/c6ffe3f10d17857c3f7125c7c2f94c0231d764e831a55684e4698147c517/checkm-genome-1.0.10.tar.gz#sha256=7fdb06c803ac0933efbbc86a775a95445b3cb6bb7b09eae4f1ae7ec77cbfbaa1 (from https://pypi.org/simple/checkm-genome/), version: 1.0.10 2022-08-04T11:09:25,969 Found link https://files.pythonhosted.org/packages/da/37/38c9a10a61ed2657a798188c83674b813d90425c73091c0106b50ce18172/checkm-genome-1.0.11.tar.gz#sha256=e475d9817d12fa771dbccc80f47758b742fc67c25261dc8ca0c0dc898c2a5190 (from https://pypi.org/simple/checkm-genome/), version: 1.0.11 2022-08-04T11:09:25,970 Found link https://files.pythonhosted.org/packages/44/cb/d6017ffa33025403c1daba046223ee3d84ea5492e99107610b970219c73c/checkm-genome-1.0.12.tar.gz#sha256=21ff9694b2c1055cb9cfa7ebaa108d9e22389090de1f0d32b60f832c058435ae (from https://pypi.org/simple/checkm-genome/), version: 1.0.12 2022-08-04T11:09:25,971 Found link https://files.pythonhosted.org/packages/db/2f/fef9adff4fd6fd52431d307a3c1095e80076a67766e6f9bba4deb573f269/checkm-genome-1.0.13.tar.gz#sha256=ffb7e4966c0fac07c7e6e7db6f6eb5b48587fa83987f8a68efbaff2afb7da82e (from https://pypi.org/simple/checkm-genome/), version: 1.0.13 2022-08-04T11:09:25,971 Found link https://files.pythonhosted.org/packages/36/1c/2bb5b99f1757e98d5d416cf8dcf72dc4ab4869406660967fd348e8c6b708/checkm-genome-1.0.15.tar.gz#sha256=b442fda2b558e3300f3512a1da903bbc5e4e6acd1a788da81e2d263c41f24be1 (from https://pypi.org/simple/checkm-genome/), version: 1.0.15 2022-08-04T11:09:25,972 Found link https://files.pythonhosted.org/packages/4a/15/84fc69c6dbab4d3ca48e7a83951d74948d6eb7a6ef46dd221d16dd80927d/checkm-genome-1.0.16.tar.gz#sha256=df6ab9d048326030342c498f22641d864d274b2daab1ef766d2efd1f4fc7f501 (from https://pypi.org/simple/checkm-genome/), version: 1.0.16 2022-08-04T11:09:25,973 Found link https://files.pythonhosted.org/packages/9d/16/4bc442eeae8f320730360d75fc1f8a83ced15181efdd36611184293da840/checkm-genome-1.0.17.tar.gz#sha256=b322e0f1a88dd27df3eba3ac9619aec5c5c498c4539cb02a700d353ade96dfe3 (from https://pypi.org/simple/checkm-genome/), version: 1.0.17 2022-08-04T11:09:25,973 Found link https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz#sha256=0dcf31eab5e340a0fff37d7a5091d46d9269b0708db8f789adcd7cbd2a09a2b7 (from https://pypi.org/simple/checkm-genome/), version: 1.0.18 2022-08-04T11:09:25,974 Found link https://files.pythonhosted.org/packages/07/29/f33ce1fdb2734cd9f44bb49b59a7b527794fad6e5cf3814c1d32eb41dcc1/checkm-genome-1.1.0.tar.gz#sha256=b1e6ac76fb94b68f601ab3c76fbdc2a506ca413e3c7232b347404408e4fe18d0 (from https://pypi.org/simple/checkm-genome/), version: 1.1.0 2022-08-04T11:09:25,975 Found link https://files.pythonhosted.org/packages/bd/60/1d695678bf00a952059946db6d1aaf753fee5f3c030cb97557e4f4b8d87c/checkm-genome-1.1.1.tar.gz#sha256=d0da6ff88bc74d6c1048eaddc594e35d582e83793de8ddf7ab7529ea4869224c (from https://pypi.org/simple/checkm-genome/), version: 1.1.1 2022-08-04T11:09:25,976 Found link https://files.pythonhosted.org/packages/3d/7d/4fdd6f38fb2af3c58e0e5feb6ec0b5c86d9571f0b2f3466e176d8829923d/checkm-genome-1.1.2.tar.gz#sha256=309c5bc4f4a895acf23c0e94fa856328d915da0d5f3aee84e5942a6ee1cc4db2 (from https://pypi.org/simple/checkm-genome/), version: 1.1.2 2022-08-04T11:09:25,976 Found link https://files.pythonhosted.org/packages/42/91/ad3bc30ca4fd15b831b7e637d59c7fbae6279077e5a4f563dca2713be2db/checkm-genome-1.1.3.tar.gz#sha256=7fda369783d3b7d6a7324ee33cc93ac3560fba509bf2139e920fa661e2b45644 (from https://pypi.org/simple/checkm-genome/), version: 1.1.3 2022-08-04T11:09:25,977 Found link https://files.pythonhosted.org/packages/71/21/cfeb30104cb1af593a70bfba38475b0632dad50b77363ae85f5e190293a1/checkm-genome-1.1.4.tar.gz#sha256=987903edffaecbb6f474dfdbd95c88a0f5e3f0bd5cf16c4b724e4352f8e8a796 (from https://pypi.org/simple/checkm-genome/), version: 1.1.4 2022-08-04T11:09:25,978 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/d6/00/f34fb4e95a3894460dd7c4be8aa842601fcbf7bb124dda310df13184a642/checkm_genome-1.1.4-py3-none-any.whl#sha256=8065fe459591523cd5373552cf4c98e435f35876cefad5580f04e4c927e57d15 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,979 Found link https://files.pythonhosted.org/packages/f8/b6/402517e75ea32bf22c7c0c33b92a394e4982d9649d130291986945798d51/checkm-genome-1.1.5.tar.gz#sha256=8c842544f468d498e4ace474c9c4e2987c8a830cb9bba249a998474827fce4e4 (from https://pypi.org/simple/checkm-genome/), version: 1.1.5 2022-08-04T11:09:25,979 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/15/11/53476838c4e9dab3439f5b2b0aa6f6712cc10ec3f92c83033a4814c57097/checkm_genome-1.1.5-py3-none-any.whl#sha256=54dccab45afa48a4c3af666250a104dc6a590b5127ff2c01fc404239c2be5ada (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,980 Found link https://files.pythonhosted.org/packages/a3/d0/e2c6d53e2bc53b4ff2f107931287480cb411003b9823c4fc0a9bbc04a323/checkm-genome-1.1.6.tar.gz#sha256=6e7c311e89b4a8108465a119d98c5d6f260d9cd7cb75ae40921b798214e7fbf4 (from https://pypi.org/simple/checkm-genome/), version: 1.1.6 2022-08-04T11:09:25,981 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/8f/6f/c2a9d242e0bd020e94ba76f9a265fc267415111b396c5a2e9afbe5c75e67/checkm_genome-1.1.6-py3-none-any.whl#sha256=d4c01ea84d142e218b248c6f11f9e29d787c520efc96e9f0d99c6a33d627b60c (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,981 Found link https://files.pythonhosted.org/packages/be/4d/a7597c6ffa017b83dbb61c39fd6b9397e8de01855f9a81200e2e6d08b26c/checkm-genome-1.1.7.tar.gz#sha256=93b7aeb737a33a3073d22abd10c4b712b4f24cc4a180a4eff8a8c7c8dd34b4f1 (from https://pypi.org/simple/checkm-genome/), version: 1.1.7 2022-08-04T11:09:25,982 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/45/af/e2262beb87ce8b0b4413b0e11e87353dafe822e9812b3cfea79dc29c5ff0/checkm_genome-1.1.7-py3-none-any.whl#sha256=c41c0be610e5ec9e53114c7099dd09fca4e30f25fc794475edd6c7ccd36295b4 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,982 Found link https://files.pythonhosted.org/packages/4c/58/93eda26ab3a3d33ccc6b345effae8ba924451178906449ae45359dde29ef/checkm-genome-1.1.8.tar.gz#sha256=20aae89ebd0d605787299343bbbb6521ad8ad23e40d47059b70cfce8862e222d (from https://pypi.org/simple/checkm-genome/), version: 1.1.8 2022-08-04T11:09:25,983 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/ed/f5/c9cfb99f450ebab6995f7130bfcf067b53d8ffcbaafd8f01bca9603bee96/checkm_genome-1.1.8-py3-none-any.whl#sha256=5b047607cef4baa7cf790c149b5727d3ba7a3f8af325e8987324cf99c4bdfcb5 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,984 Found link https://files.pythonhosted.org/packages/39/73/4e77fad2bb5c74a685c2a9f853394f8dbf2b19aaf961d38bc612dff05599/checkm-genome-1.1.9.tar.gz#sha256=64896daaf89de2acb3c2e7c39490e2de3a3ef0da3eed7dc69e8e04a0faaf8f59 (from https://pypi.org/simple/checkm-genome/), version: 1.1.9 2022-08-04T11:09:25,984 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/9c/65/f414d52ae06d32f599f1b8209dcc5a1a428287ede9cac85d4555e54c9cf7/checkm_genome-1.1.9-py3-none-any.whl#sha256=18e721887b0a632db7ce70b6fbc94a1fbd28ecd5939dfdaffa73ad30f83608e7 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,985 Found link https://files.pythonhosted.org/packages/6d/1f/b14672cc6963db24f993555d685f2d99a52b2f8f86019af5de56df89fdb4/checkm-genome-1.1.10.tar.gz#sha256=49b729fdef33cbcd799027956eb1331e1236aa0e40d997bc97513750ec80da3a (from https://pypi.org/simple/checkm-genome/), version: 1.1.10 2022-08-04T11:09:25,986 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/a8/06/a745d2525ac86e8e73994f17a73db67cc8aea25d0940bf5d2fba01e722fc/checkm_genome-1.1.10-py3-none-any.whl#sha256=476b721a31cba537837cb632f238fe757de4f3d439863d42c0b3ad8fb10d6273 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,986 Found link https://files.pythonhosted.org/packages/ec/37/7ed7d421c667e15db7714b678a6867c272d41c9ae72f36387048b82de62b/checkm-genome-1.1.11.tar.gz#sha256=3e0c495d108902544b2be5e86e7151873ecb97054b0d02067ed03ff6ab0781d5 (from https://pypi.org/simple/checkm-genome/), version: 1.1.11 2022-08-04T11:09:25,987 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/50/c9/058373b8904a483e2adb0fcc5d78ea116574d2aadd7896f23309cb4b66d8/checkm_genome-1.1.11-py3-none-any.whl#sha256=0afb378efc4a1795b63c515846a8b931faa0a1949f0da61d52b1f1305af0a34f (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,988 Found link https://files.pythonhosted.org/packages/f9/5f/6160688293fbd613360e829f2e1fb6ef724f920bb7ad39347905aa648c97/checkm-genome-1.2.0.tar.gz#sha256=7e0dcf947428a6e1b13ccc5f09943315a7381e5dff558cd38d25ae03527c4f22 (from https://pypi.org/simple/checkm-genome/), version: 1.2.0 2022-08-04T11:09:25,988 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/6d/15/c55e56dd3779f707c8c645016186768b919df7ecec12a35cdeaf5f8d30b6/checkm_genome-1.2.0-py3-none-any.whl#sha256=4d59515df30536fff5d8db79b592cd913944d48d3d6fc8508e9add0455b69688 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,989 Found link https://files.pythonhosted.org/packages/b0/03/b30dbd3892568ac8ca2ba5c3346fa8bf51e03fba42a21fa0ea162319ca99/checkm-genome-1.2.1.tar.gz#sha256=33907aa7bbf029f8345e33df80d5c89b7a719041f55ece4f7470cd061c8eff76 (from https://pypi.org/simple/checkm-genome/), version: 1.2.1 2022-08-04T11:09:25,990 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/b5/33/7d43376eb7b443dfbd88049178d2c7a9f3c638607eab957f98171ef3e3bf/checkm_genome-1.2.1-py3-none-any.whl#sha256=dcae47d7003dccf2f6d49cd7bfbdfa6d250550ef9164779522ac8e5f1158fe39 (from https://pypi.org/simple/checkm-genome/) 2022-08-04T11:09:25,991 Fetching project page and analyzing links: https://www.piwheels.org/simple/checkm-genome/ 2022-08-04T11:09:25,991 Getting page https://www.piwheels.org/simple/checkm-genome/ 2022-08-04T11:09:25,993 Found index url https://www.piwheels.org/simple 2022-08-04T11:09:26,245 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.2.0-py3-none-any.whl#sha256=d3257520d1aba66c3066f8b1f0205bb0589942655721f22b590a07bd7e0c52d8 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,246 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.11-py3-none-any.whl#sha256=9f81ff38ae175b6f1e843c070f1ac8f86b1dcd08bd8722c912bf1d311298ac6f (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,246 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.10-py3-none-any.whl#sha256=67da7b0cf792bd04f377321cb800cfea58bb8be35cb7addc6dbbead0c52b7532 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,247 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.9-py3-none-any.whl#sha256=b88982265ff163cdfb2e706571cdf019fff36feabb538c0e0ec198b80d074435 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,248 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.8-py3-none-any.whl#sha256=efd9e5598d1533e02758e57a7dec065dd75578654a61821dc85f813b534d65e7 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,248 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.7-py3-none-any.whl#sha256=8d36ebf895c73f11d328fa95477eddaa0ed18c853b6f4e6863949aa16293107d (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,249 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.6-py3-none-any.whl#sha256=e2b1bfecc6b3df92ed34f6ac244c3c5e3c323c7bbd77b301fe2b15a0b08012ef (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,249 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.5-py3-none-any.whl#sha256=ea599c3b15b5066aa4b3c47df8958232c228b5679cce1f0972e641bb39807f88 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,250 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.4-py3-none-any.whl#sha256=92fe4afbc402171f94f7c1b48adea076305effd33d027ccc76aff07daf92ea32 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,250 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.3-py3-none-any.whl#sha256=4c0e8a1653080b4b389c284101e66dc66afe8eee2cca075a324fcd5935c463b8 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,251 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.2-py3-none-any.whl#sha256=0f98daa438be26d5cb78dddfcca6abfb41cc15919b3d4be878d6f44f2fc379eb (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,251 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.1-py3-none-any.whl#sha256=9dfd4bb385531cfcb8998838631eb0048e25076d4822cd647df3ebd6379ba97b (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,252 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.0-py3-none-any.whl#sha256=b5e5e0ade8b622c15f8910008d6370b3bb52503931b19aad0a1ab6376a62533a (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,252 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.18-py3-none-any.whl#sha256=2b854b3de35c510e3dd8369eaa3c3611854db40f5767ea961e8180f260a71182 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,253 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.17-py3-none-any.whl#sha256=5a457a8365a457166f7d7b0875c36674a262bc9b078d2b9670101c57ade7e398 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,253 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.16-py3-none-any.whl#sha256=6b38ccb482035f853a89a64c6a37b1f5a76c3b28f1e31ad856bb4e90d4398793 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,254 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.15-py3-none-any.whl#sha256=c8bec3cf0074f37f1f2ddd8f5eb22dd07781238972f1fd41f40a21d81f9daaa6 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,254 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.13-py3-none-any.whl#sha256=e6771b22e33f45b56afbe0d50e5e7abe429654cec051c9745b7bf27f4322bc45 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,255 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.12-py3-none-any.whl#sha256=b66e59c8ba50666b1d667508de7af03ea5fb71fa0f369aff6f2aa30148d44649 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,255 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.11-py3-none-any.whl#sha256=059d57d5ddb379898baf787fd1f040dbd794f4d7a815cd2f746785a7898e9744 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,256 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.10-py3-none-any.whl#sha256=c122049dea296391bfe446e3cf76f39a990173f33e049ca68d562e67da9dd904 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,256 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.8-py3-none-any.whl#sha256=6ffa506342dfcd2f19798610768e84b9f7ce8bd070a6f4420efa9c8a1f2bdddf (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,257 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.7-py3-none-any.whl#sha256=618cbedd9e48ede2eb636215e3d98f88531984df605c5d01a5f21d0c72f3e66c (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,258 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.5-py3-none-any.whl#sha256=48179c156bd1703e531f09bd5380401fcfc20db7cd49ccab261eea676b2fc238 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,258 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.4-py3-none-any.whl#sha256=d310a06b080b15aa24a49bfcabac26470bf5fd97ead97651d1a466920f0053c1 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,259 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.3-py3-none-any.whl#sha256=e94785a4fedb73d59993962b1e763897a4a7f77e6096f7de802352670adaca18 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,259 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.2-py3-none-any.whl#sha256=e3eebd2b31a6d49271ac1c17a28e381955ea80379b6d41bbf41fd616a8608f95 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,260 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.1-py3-none-any.whl#sha256=0894dffa2a280e3eead5fb539269f9fd1cd2e0d6c5bc2dac3de505f95d5849f8 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,260 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.7-py3-none-any.whl#sha256=47aba65eb50a67efb0ebad4c16118d0b835af57b538aabfff9babe0acda7d68e (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,261 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.6-py3-none-any.whl#sha256=d985306302851b898b7974c98e6c05c5f29b66672d933f87f013bf6ddd0a77de (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,261 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.5-py3-none-any.whl#sha256=a58a278bad70473aae825295218d4161b80c04d3d741159a329a30561e6169db (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,262 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.4-py3-none-any.whl#sha256=3756f82037a7836255e1f78b5acdfffdcccde5e0e41493bbfdd85f90e0b6a84e (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,262 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.2-py3-none-any.whl#sha256=f88283bb4531c3f2a3e2b279906ed5faebadb3bcfe46044c9d964d52cbf3ee44 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,263 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.1-py3-none-any.whl#sha256=ba77df56fab38368ca9a0be40e0e4a4d8f1f2f4030bee8e24cea9acd3da364c7 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,263 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.0-py3-none-any.whl#sha256=3e190d470a84b4f698bcdc5ee3cb5f4c072a8133ec54e88e242712889e3beca0 (from https://www.piwheels.org/simple/checkm-genome/) 2022-08-04T11:09:26,264 Skipping link: not a file: https://www.piwheels.org/simple/checkm-genome/ 2022-08-04T11:09:26,264 Skipping link: not a file: https://pypi.org/simple/checkm-genome/ 2022-08-04T11:09:26,312 Given no hashes to check 1 links for project 'checkm-genome': discarding no candidates 2022-08-04T11:09:26,344 Collecting checkm-genome==1.2.1 2022-08-04T11:09:26,349 Created temporary directory: /tmp/pip-unpack-t_neeaoy 2022-08-04T11:09:27,486 Downloading checkm-genome-1.2.1.tar.gz (920 kB) 2022-08-04T11:09:28,501 Added checkm-genome==1.2.1 from https://files.pythonhosted.org/packages/b0/03/b30dbd3892568ac8ca2ba5c3346fa8bf51e03fba42a21fa0ea162319ca99/checkm-genome-1.2.1.tar.gz#sha256=33907aa7bbf029f8345e33df80d5c89b7a719041f55ece4f7470cd061c8eff76 to build tracker '/tmp/pip-build-tracker-abe_zl5l' 2022-08-04T11:09:28,504 Running setup.py (path:/tmp/pip-wheel-nhn0zts8/checkm-genome_1eff37108bd344b29ef7fe808d0d90f1/setup.py) egg_info for package checkm-genome 2022-08-04T11:09:28,506 Created temporary directory: /tmp/pip-pip-egg-info-j98965pd 2022-08-04T11:09:28,506 Preparing metadata (setup.py): started 2022-08-04T11:09:28,508 Running command python setup.py egg_info 2022-08-04T11:09:36,696 running egg_info 2022-08-04T11:09:36,701 creating /tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info 2022-08-04T11:09:37,433 writing /tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/PKG-INFO 2022-08-04T11:09:38,032 writing dependency_links to /tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/dependency_links.txt 2022-08-04T11:09:41,011 writing requirements to /tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/requires.txt 2022-08-04T11:09:41,610 writing top-level names to /tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/top_level.txt 2022-08-04T11:09:41,612 writing manifest file '/tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/SOURCES.txt' 2022-08-04T11:09:42,794 reading manifest file '/tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/SOURCES.txt' 2022-08-04T11:09:42,797 reading manifest template 'MANIFEST.in' 2022-08-04T11:09:42,801 warning: no files found matching '*.txt' under directory 'docs' 2022-08-04T11:09:42,806 adding license file 'LICENSE' 2022-08-04T11:09:42,816 writing manifest file '/tmp/pip-pip-egg-info-j98965pd/checkm_genome.egg-info/SOURCES.txt' 2022-08-04T11:09:43,036 Preparing metadata (setup.py): finished with status 'done' 2022-08-04T11:09:43,047 Source in /tmp/pip-wheel-nhn0zts8/checkm-genome_1eff37108bd344b29ef7fe808d0d90f1 has version 1.2.1, which satisfies requirement checkm-genome==1.2.1 from https://files.pythonhosted.org/packages/b0/03/b30dbd3892568ac8ca2ba5c3346fa8bf51e03fba42a21fa0ea162319ca99/checkm-genome-1.2.1.tar.gz#sha256=33907aa7bbf029f8345e33df80d5c89b7a719041f55ece4f7470cd061c8eff76 2022-08-04T11:09:43,049 Removed checkm-genome==1.2.1 from https://files.pythonhosted.org/packages/b0/03/b30dbd3892568ac8ca2ba5c3346fa8bf51e03fba42a21fa0ea162319ca99/checkm-genome-1.2.1.tar.gz#sha256=33907aa7bbf029f8345e33df80d5c89b7a719041f55ece4f7470cd061c8eff76 from build tracker '/tmp/pip-build-tracker-abe_zl5l' 2022-08-04T11:09:43,059 Created temporary directory: /tmp/pip-unpack-n35862zr 2022-08-04T11:09:43,060 Building wheels for collected packages: checkm-genome 2022-08-04T11:09:43,070 Created temporary directory: /tmp/pip-wheel-kk64x04c 2022-08-04T11:09:43,071 Building wheel for checkm-genome (setup.py): started 2022-08-04T11:09:43,073 Destination directory: /tmp/pip-wheel-kk64x04c 2022-08-04T11:09:43,073 Running command python setup.py bdist_wheel 2022-08-04T11:09:50,710 running bdist_wheel 2022-08-04T11:09:51,113 running build 2022-08-04T11:09:51,114 running build_py 2022-08-04T11:09:51,845 creating build 2022-08-04T11:09:51,846 creating build/lib 2022-08-04T11:09:51,847 creating build/lib/checkm 2022-08-04T11:09:51,849 copying checkm/ssuFinder.py -> build/lib/checkm 2022-08-04T11:09:51,854 copying checkm/coverage.py -> build/lib/checkm 2022-08-04T11:09:51,860 copying checkm/markerSets.py -> build/lib/checkm 2022-08-04T11:09:51,865 copying checkm/__init__.py -> build/lib/checkm 2022-08-04T11:09:51,867 copying checkm/taxonParser.py -> build/lib/checkm 2022-08-04T11:09:51,872 copying checkm/binStatistics.py -> build/lib/checkm 2022-08-04T11:09:51,876 copying checkm/manifestManager.py -> build/lib/checkm 2022-08-04T11:09:51,881 copying checkm/aminoAcidIdentity.py -> build/lib/checkm 2022-08-04T11:09:51,886 copying checkm/hmmer.py -> build/lib/checkm 2022-08-04T11:09:51,890 copying checkm/customHelpFormatter.py -> build/lib/checkm 2022-08-04T11:09:51,894 copying checkm/timeKeeper.py -> build/lib/checkm 2022-08-04T11:09:51,898 copying checkm/hmmerModelParser.py -> build/lib/checkm 2022-08-04T11:09:51,902 copying checkm/hmmerAligner.py -> build/lib/checkm 2022-08-04T11:09:51,907 copying checkm/uniqueMarkers.py -> build/lib/checkm 2022-08-04T11:09:51,911 copying checkm/coverageWindows.py -> build/lib/checkm 2022-08-04T11:09:51,915 copying checkm/logger.py -> build/lib/checkm 2022-08-04T11:09:51,919 copying checkm/pplacer.py -> build/lib/checkm 2022-08-04T11:09:51,923 copying checkm/merger.py -> build/lib/checkm 2022-08-04T11:09:51,927 copying checkm/unbinned.py -> build/lib/checkm 2022-08-04T11:09:51,931 copying checkm/checkmData.py -> build/lib/checkm 2022-08-04T11:09:51,935 copying checkm/resultsParser.py -> build/lib/checkm 2022-08-04T11:09:51,941 copying checkm/prodigal.py -> build/lib/checkm 2022-08-04T11:09:51,946 copying checkm/markerGeneFinder.py -> build/lib/checkm 2022-08-04T11:09:51,950 copying checkm/common.py -> build/lib/checkm 2022-08-04T11:09:51,954 copying checkm/main.py -> build/lib/checkm 2022-08-04T11:09:51,960 copying checkm/defaultValues.py -> build/lib/checkm 2022-08-04T11:09:51,964 copying checkm/binTools.py -> build/lib/checkm 2022-08-04T11:09:51,968 copying checkm/fileEntity.py -> build/lib/checkm 2022-08-04T11:09:51,972 copying checkm/genomicSignatures.py -> build/lib/checkm 2022-08-04T11:09:51,976 copying checkm/prettytable.py -> build/lib/checkm 2022-08-04T11:09:51,983 copying checkm/treeParser.py -> build/lib/checkm 2022-08-04T11:09:51,989 copying checkm/profile.py -> build/lib/checkm 2022-08-04T11:09:51,995 creating build/lib/checkm/plot 2022-08-04T11:09:51,997 copying checkm/plot/gcPlots.py -> build/lib/checkm/plot 2022-08-04T11:09:52,001 copying checkm/plot/__init__.py -> build/lib/checkm/plot 2022-08-04T11:09:52,004 copying checkm/plot/AbstractPlot.py -> build/lib/checkm/plot 2022-08-04T11:09:52,008 copying checkm/plot/distributionPlots.py -> build/lib/checkm/plot 2022-08-04T11:09:52,011 copying checkm/plot/codingDensityPlots.py -> build/lib/checkm/plot 2022-08-04T11:09:52,016 copying checkm/plot/tetraDistPlots.py -> build/lib/checkm/plot 2022-08-04T11:09:52,020 copying checkm/plot/markerGenePosPlot.py -> build/lib/checkm/plot 2022-08-04T11:09:52,024 copying checkm/plot/nxPlot.py -> build/lib/checkm/plot 2022-08-04T11:09:52,027 copying checkm/plot/gcBiasPlots.py -> build/lib/checkm/plot 2022-08-04T11:09:52,031 copying checkm/plot/lengthHistogram.py -> build/lib/checkm/plot 2022-08-04T11:09:52,036 creating build/lib/checkm/test 2022-08-04T11:09:52,038 copying checkm/test/__init__.py -> build/lib/checkm/test 2022-08-04T11:09:52,041 copying checkm/test/test_markerSets.py -> build/lib/checkm/test 2022-08-04T11:09:52,045 copying checkm/test/test_taxonomyUtils.py -> build/lib/checkm/test 2022-08-04T11:09:52,048 copying checkm/test/test_seqUtils.py -> build/lib/checkm/test 2022-08-04T11:09:52,052 copying checkm/test/test_aminoAcidIdentity.py -> build/lib/checkm/test 2022-08-04T11:09:52,056 copying checkm/test/test_binStatistics.py -> build/lib/checkm/test 2022-08-04T11:09:52,059 copying checkm/test/test_ecoli.py -> build/lib/checkm/test 2022-08-04T11:09:52,064 copying checkm/test/test_genomicSignatures.py -> build/lib/checkm/test 2022-08-04T11:09:52,068 creating build/lib/checkm/util 2022-08-04T11:09:52,070 copying checkm/util/__init__.py -> build/lib/checkm/util 2022-08-04T11:09:52,073 copying checkm/util/img.py -> build/lib/checkm/util 2022-08-04T11:09:52,078 copying checkm/util/pfam.py -> build/lib/checkm/util 2022-08-04T11:09:52,082 copying checkm/util/taxonomyUtils.py -> build/lib/checkm/util 2022-08-04T11:09:52,086 copying checkm/util/seqUtils.py -> build/lib/checkm/util 2022-08-04T11:09:52,089 running egg_info 2022-08-04T11:09:53,567 writing checkm_genome.egg-info/PKG-INFO 2022-08-04T11:09:54,159 writing dependency_links to checkm_genome.egg-info/dependency_links.txt 2022-08-04T11:09:57,117 writing requirements to checkm_genome.egg-info/requires.txt 2022-08-04T11:09:57,711 writing top-level names to checkm_genome.egg-info/top_level.txt 2022-08-04T11:09:57,871 reading manifest file 'checkm_genome.egg-info/SOURCES.txt' 2022-08-04T11:09:57,878 reading manifest template 'MANIFEST.in' 2022-08-04T11:09:57,881 warning: no files found matching '*.txt' under directory 'docs' 2022-08-04T11:09:57,886 adding license file 'LICENSE' 2022-08-04T11:09:57,897 writing manifest file 'checkm_genome.egg-info/SOURCES.txt' 2022-08-04T11:09:57,903 copying checkm/DATA_CONFIG -> build/lib/checkm 2022-08-04T11:09:57,907 copying checkm/VERSION -> build/lib/checkm 2022-08-04T11:09:57,921 running build_scripts 2022-08-04T11:09:57,921 creating build/scripts-3.7 2022-08-04T11:09:57,924 copying and adjusting bin/checkm -> build/scripts-3.7 2022-08-04T11:09:57,931 changing mode of build/scripts-3.7/checkm from 644 to 755 2022-08-04T11:09:58,662 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-08-04T11:09:58,663 setuptools.SetuptoolsDeprecationWarning, 2022-08-04T11:09:59,397 installing to build/bdist.linux-armv7l/wheel 2022-08-04T11:09:59,397 running install 2022-08-04T11:09:59,459 running install_lib 2022-08-04T11:10:00,195 creating build/bdist.linux-armv7l 2022-08-04T11:10:00,196 creating build/bdist.linux-armv7l/wheel 2022-08-04T11:10:00,200 creating build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,202 copying build/lib/checkm/ssuFinder.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,209 creating build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,211 copying build/lib/checkm/test/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,215 copying build/lib/checkm/test/test_markerSets.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,219 copying build/lib/checkm/test/test_taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,223 copying build/lib/checkm/test/test_seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,227 copying build/lib/checkm/test/test_aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,233 copying build/lib/checkm/test/test_binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,237 copying build/lib/checkm/test/test_ecoli.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,242 copying build/lib/checkm/test/test_genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm/test 2022-08-04T11:10:00,247 copying build/lib/checkm/coverage.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,252 copying build/lib/checkm/markerSets.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,258 copying build/lib/checkm/__init__.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,262 copying build/lib/checkm/taxonParser.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,268 creating build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,270 copying build/lib/checkm/plot/gcPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,276 copying build/lib/checkm/plot/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,279 copying build/lib/checkm/plot/AbstractPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,284 copying build/lib/checkm/plot/distributionPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,289 copying build/lib/checkm/plot/codingDensityPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,294 copying build/lib/checkm/plot/tetraDistPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,299 copying build/lib/checkm/plot/markerGenePosPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,304 copying build/lib/checkm/plot/nxPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,308 copying build/lib/checkm/plot/gcBiasPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,313 copying build/lib/checkm/plot/lengthHistogram.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2022-08-04T11:10:00,317 copying build/lib/checkm/binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,323 copying build/lib/checkm/manifestManager.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,328 copying build/lib/checkm/aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,333 copying build/lib/checkm/hmmer.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,339 creating build/bdist.linux-armv7l/wheel/checkm/util 2022-08-04T11:10:00,341 copying build/lib/checkm/util/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/util 2022-08-04T11:10:00,345 copying build/lib/checkm/util/img.py -> build/bdist.linux-armv7l/wheel/checkm/util 2022-08-04T11:10:00,353 copying build/lib/checkm/util/pfam.py -> build/bdist.linux-armv7l/wheel/checkm/util 2022-08-04T11:10:00,358 copying build/lib/checkm/util/taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util 2022-08-04T11:10:00,362 copying build/lib/checkm/util/seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util 2022-08-04T11:10:00,367 copying build/lib/checkm/DATA_CONFIG -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,371 copying build/lib/checkm/customHelpFormatter.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,375 copying build/lib/checkm/timeKeeper.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,379 copying build/lib/checkm/hmmerModelParser.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,384 copying build/lib/checkm/hmmerAligner.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,390 copying build/lib/checkm/uniqueMarkers.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,394 copying build/lib/checkm/coverageWindows.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,399 copying build/lib/checkm/logger.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,403 copying build/lib/checkm/VERSION -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,407 copying build/lib/checkm/pplacer.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,412 copying build/lib/checkm/merger.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,417 copying build/lib/checkm/unbinned.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,421 copying build/lib/checkm/checkmData.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,426 copying build/lib/checkm/resultsParser.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,432 copying build/lib/checkm/prodigal.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,437 copying build/lib/checkm/markerGeneFinder.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,442 copying build/lib/checkm/common.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,446 copying build/lib/checkm/main.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,453 copying build/lib/checkm/defaultValues.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,458 copying build/lib/checkm/binTools.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,462 copying build/lib/checkm/fileEntity.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,467 copying build/lib/checkm/genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,472 copying build/lib/checkm/prettytable.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,480 copying build/lib/checkm/treeParser.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,487 copying build/lib/checkm/profile.py -> build/bdist.linux-armv7l/wheel/checkm 2022-08-04T11:10:00,491 running install_egg_info 2022-08-04T11:10:01,281 Copying checkm_genome.egg-info to build/bdist.linux-armv7l/wheel/checkm_genome-1.2.1-py3.7.egg-info 2022-08-04T11:10:01,305 running install_scripts 2022-08-04T11:10:01,411 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.2.1.data 2022-08-04T11:10:01,412 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.2.1.data/scripts 2022-08-04T11:10:01,415 copying build/scripts-3.7/checkm -> build/bdist.linux-armv7l/wheel/checkm_genome-1.2.1.data/scripts 2022-08-04T11:10:01,422 changing mode of build/bdist.linux-armv7l/wheel/checkm_genome-1.2.1.data/scripts/checkm to 755 2022-08-04T11:10:01,471 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-04T11:10:01,482 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.2.1.dist-info/WHEEL 2022-08-04T11:10:01,487 creating '/tmp/pip-wheel-kk64x04c/checkm_genome-1.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-04T11:10:01,493 adding 'checkm/DATA_CONFIG' 2022-08-04T11:10:01,496 adding 'checkm/VERSION' 2022-08-04T11:10:01,499 adding 'checkm/__init__.py' 2022-08-04T11:10:01,503 adding 'checkm/aminoAcidIdentity.py' 2022-08-04T11:10:01,507 adding 'checkm/binStatistics.py' 2022-08-04T11:10:01,512 adding 'checkm/binTools.py' 2022-08-04T11:10:01,517 adding 'checkm/checkmData.py' 2022-08-04T11:10:01,521 adding 'checkm/common.py' 2022-08-04T11:10:01,526 adding 'checkm/coverage.py' 2022-08-04T11:10:01,530 adding 'checkm/coverageWindows.py' 2022-08-04T11:10:01,534 adding 'checkm/customHelpFormatter.py' 2022-08-04T11:10:01,537 adding 'checkm/defaultValues.py' 2022-08-04T11:10:01,541 adding 'checkm/fileEntity.py' 2022-08-04T11:10:01,545 adding 'checkm/genomicSignatures.py' 2022-08-04T11:10:01,549 adding 'checkm/hmmer.py' 2022-08-04T11:10:01,556 adding 'checkm/hmmerAligner.py' 2022-08-04T11:10:01,560 adding 'checkm/hmmerModelParser.py' 2022-08-04T11:10:01,564 adding 'checkm/logger.py' 2022-08-04T11:10:01,573 adding 'checkm/main.py' 2022-08-04T11:10:01,579 adding 'checkm/manifestManager.py' 2022-08-04T11:10:01,583 adding 'checkm/markerGeneFinder.py' 2022-08-04T11:10:01,589 adding 'checkm/markerSets.py' 2022-08-04T11:10:01,593 adding 'checkm/merger.py' 2022-08-04T11:10:01,597 adding 'checkm/pplacer.py' 2022-08-04T11:10:01,611 adding 'checkm/prettytable.py' 2022-08-04T11:10:01,617 adding 'checkm/prodigal.py' 2022-08-04T11:10:01,621 adding 'checkm/profile.py' 2022-08-04T11:10:01,631 adding 'checkm/resultsParser.py' 2022-08-04T11:10:01,637 adding 'checkm/ssuFinder.py' 2022-08-04T11:10:01,641 adding 'checkm/taxonParser.py' 2022-08-04T11:10:01,644 adding 'checkm/timeKeeper.py' 2022-08-04T11:10:01,652 adding 'checkm/treeParser.py' 2022-08-04T11:10:01,656 adding 'checkm/unbinned.py' 2022-08-04T11:10:01,660 adding 'checkm/uniqueMarkers.py' 2022-08-04T11:10:01,665 adding 'checkm/plot/AbstractPlot.py' 2022-08-04T11:10:01,668 adding 'checkm/plot/__init__.py' 2022-08-04T11:10:01,672 adding 'checkm/plot/codingDensityPlots.py' 2022-08-04T11:10:01,675 adding 'checkm/plot/distributionPlots.py' 2022-08-04T11:10:01,678 adding 'checkm/plot/gcBiasPlots.py' 2022-08-04T11:10:01,682 adding 'checkm/plot/gcPlots.py' 2022-08-04T11:10:01,686 adding 'checkm/plot/lengthHistogram.py' 2022-08-04T11:10:01,690 adding 'checkm/plot/markerGenePosPlot.py' 2022-08-04T11:10:01,693 adding 'checkm/plot/nxPlot.py' 2022-08-04T11:10:01,697 adding 'checkm/plot/tetraDistPlots.py' 2022-08-04T11:10:01,701 adding 'checkm/test/__init__.py' 2022-08-04T11:10:01,705 adding 'checkm/test/test_aminoAcidIdentity.py' 2022-08-04T11:10:01,708 adding 'checkm/test/test_binStatistics.py' 2022-08-04T11:10:01,712 adding 'checkm/test/test_ecoli.py' 2022-08-04T11:10:01,715 adding 'checkm/test/test_genomicSignatures.py' 2022-08-04T11:10:01,718 adding 'checkm/test/test_markerSets.py' 2022-08-04T11:10:01,721 adding 'checkm/test/test_seqUtils.py' 2022-08-04T11:10:01,724 adding 'checkm/test/test_taxonomyUtils.py' 2022-08-04T11:10:01,728 adding 'checkm/util/__init__.py' 2022-08-04T11:10:01,734 adding 'checkm/util/img.py' 2022-08-04T11:10:01,738 adding 'checkm/util/pfam.py' 2022-08-04T11:10:01,743 adding 'checkm/util/seqUtils.py' 2022-08-04T11:10:01,746 adding 'checkm/util/taxonomyUtils.py' 2022-08-04T11:10:01,759 adding 'checkm_genome-1.2.1.data/scripts/checkm' 2022-08-04T11:10:01,777 adding 'checkm_genome-1.2.1.dist-info/LICENSE' 2022-08-04T11:10:01,781 adding 'checkm_genome-1.2.1.dist-info/METADATA' 2022-08-04T11:10:01,783 adding 'checkm_genome-1.2.1.dist-info/WHEEL' 2022-08-04T11:10:01,785 adding 'checkm_genome-1.2.1.dist-info/top_level.txt' 2022-08-04T11:10:01,788 adding 'checkm_genome-1.2.1.dist-info/RECORD' 2022-08-04T11:10:01,798 removing build/bdist.linux-armv7l/wheel 2022-08-04T11:10:02,066 Building wheel for checkm-genome (setup.py): finished with status 'done' 2022-08-04T11:10:02,077 Created wheel for checkm-genome: filename=checkm_genome-1.2.1-py3-none-any.whl size=162947 sha256=af297501476acea53ac2471d9d57d9c41eed6a2e80db1c3f9a4cf6dd73201b49 2022-08-04T11:10:02,079 Stored in directory: /tmp/pip-ephem-wheel-cache-7lks8s3l/wheels/a2/67/56/62027f6f58a3d4fd18bd72b987526c89d177a38953c1a2b6a7 2022-08-04T11:10:02,109 Successfully built checkm-genome 2022-08-04T11:10:02,128 Removed build tracker: '/tmp/pip-build-tracker-abe_zl5l'