2022-08-11T15:38:15,993 Created temporary directory: /tmp/pip-ephem-wheel-cache-pk6fddje 2022-08-11T15:38:15,999 Created temporary directory: /tmp/pip-build-tracker-lanwa89f 2022-08-11T15:38:15,999 Initialized build tracking at /tmp/pip-build-tracker-lanwa89f 2022-08-11T15:38:16,000 Created build tracker: /tmp/pip-build-tracker-lanwa89f 2022-08-11T15:38:16,000 Entered build tracker: /tmp/pip-build-tracker-lanwa89f 2022-08-11T15:38:16,001 Created temporary directory: /tmp/pip-wheel-4uz9qaus 2022-08-11T15:38:16,070 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-11T15:38:16,079 2 location(s) to search for versions of mmdf: 2022-08-11T15:38:16,079 * https://pypi.org/simple/mmdf/ 2022-08-11T15:38:16,079 * https://www.piwheels.org/simple/mmdf/ 2022-08-11T15:38:16,080 Fetching project page and analyzing links: https://pypi.org/simple/mmdf/ 2022-08-11T15:38:16,081 Getting page https://pypi.org/simple/mmdf/ 2022-08-11T15:38:16,084 Found index url https://pypi.org/simple 2022-08-11T15:38:16,268 Skipping link: No binaries permitted for mmdf: https://files.pythonhosted.org/packages/a6/54/fcf9c5ae7bd22c6d2e9a89988f7699d386696ff82ca08a92fa13b811d0f1/mmdf-0.0.1-py2.py3-none-any.whl#sha256=f6abca1dd94a6a1a94f175e157006186c5e4df9aab1c3e476abf024ca6d841c0 (from https://pypi.org/simple/mmdf/) (requires-python:>=3.7) 2022-08-11T15:38:16,270 Found link https://files.pythonhosted.org/packages/97/24/31439e285d95e46c0e551a8f85ecf9b4e8c086a32b1228b11e74337e28b9/mmdf-0.0.1.tar.gz#sha256=0a0d7f8d5b39b1c859c324f16d28ed0db5b5502a7db0516e390b1cd14a458f9f (from https://pypi.org/simple/mmdf/) (requires-python:>=3.7), version: 0.0.1 2022-08-11T15:38:16,271 Fetching project page and analyzing links: https://www.piwheels.org/simple/mmdf/ 2022-08-11T15:38:16,272 Getting page https://www.piwheels.org/simple/mmdf/ 2022-08-11T15:38:16,274 Found index url https://www.piwheels.org/simple 2022-08-11T15:38:16,488 Skipping link: not a file: https://www.piwheels.org/simple/mmdf/ 2022-08-11T15:38:16,489 Skipping link: not a file: https://pypi.org/simple/mmdf/ 2022-08-11T15:38:16,522 Given no hashes to check 1 links for project 'mmdf': discarding no candidates 2022-08-11T15:38:16,553 Collecting mmdf==0.0.1 2022-08-11T15:38:16,557 Created temporary directory: /tmp/pip-unpack-sk9_h0dn 2022-08-11T15:38:16,785 Downloading mmdf-0.0.1.tar.gz (4.6 kB) 2022-08-11T15:38:16,877 Added mmdf==0.0.1 from https://files.pythonhosted.org/packages/97/24/31439e285d95e46c0e551a8f85ecf9b4e8c086a32b1228b11e74337e28b9/mmdf-0.0.1.tar.gz#sha256=0a0d7f8d5b39b1c859c324f16d28ed0db5b5502a7db0516e390b1cd14a458f9f to build tracker '/tmp/pip-build-tracker-lanwa89f' 2022-08-11T15:38:16,895 Created temporary directory: /tmp/pip-build-env-dx6lyjfd 2022-08-11T15:38:16,909 Created temporary directory: /tmp/pip-standalone-pip-3wrsk0i2 2022-08-11T15:38:19,216 Installing build dependencies: started 2022-08-11T15:38:19,219 Running command pip subprocess to install build dependencies 2022-08-11T15:38:28,917 Using pip 22.1.2 from /tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip (python 3.7) 2022-08-11T15:38:30,378 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-11T15:38:34,492 Collecting setuptools>=42 2022-08-11T15:38:34,762 Using cached https://www.piwheels.org/simple/setuptools/setuptools-64.0.0-py3-none-any.whl (1.2 MB) 2022-08-11T15:38:35,416 Collecting wheel 2022-08-11T15:38:35,450 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-08-11T15:38:36,336 Collecting setuptools_scm[toml]>=3.4 2022-08-11T15:38:36,374 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-08-11T15:38:36,752 Collecting tomli>=1.0.0 2022-08-11T15:38:36,783 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-08-11T15:38:37,199 Collecting packaging>=20.0 2022-08-11T15:38:37,232 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-08-11T15:38:38,213 Collecting importlib-metadata 2022-08-11T15:38:38,246 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-4.12.0-py3-none-any.whl (21 kB) 2022-08-11T15:38:38,482 Collecting typing-extensions 2022-08-11T15:38:38,517 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.3.0-py3-none-any.whl (25 kB) 2022-08-11T15:38:39,215 Collecting pyparsing!=3.0.5,>=2.0.2 2022-08-11T15:38:39,261 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-08-11T15:38:39,845 Collecting zipp>=0.5 2022-08-11T15:38:39,877 Using cached https://www.piwheels.org/simple/zipp/zipp-3.8.1-py3-none-any.whl (5.6 kB) 2022-08-11T15:38:46,471 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, pyparsing, packaging, importlib-metadata, setuptools_scm 2022-08-11T15:38:46,803 Creating /tmp/pip-build-env-dx6lyjfd/overlay/bin 2022-08-11T15:38:46,808 changing mode of /tmp/pip-build-env-dx6lyjfd/overlay/bin/wheel to 755 2022-08-11T15:38:53,143 Successfully installed importlib-metadata-4.12.0 packaging-21.3 pyparsing-3.0.9 setuptools-64.0.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.3.0 wheel-0.37.1 zipp-3.8.1 2022-08-11T15:38:53,387 --- Logging error --- 2022-08-11T15:38:53,388 Traceback (most recent call last): 2022-08-11T15:38:53,388 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-08-11T15:38:53,389 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-08-11T15:38:53,389 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-08-11T15:38:53,389 extend(render(renderable, render_options)) 2022-08-11T15:38:53,390 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-08-11T15:38:53,390 for render_output in iter_render: 2022-08-11T15:38:53,391 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-08-11T15:38:53,391 for line in lines: 2022-08-11T15:38:53,391 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-08-11T15:38:53,391 for segment in segments: 2022-08-11T15:38:53,392 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-08-11T15:38:53,392 renderable = rich_cast(renderable) 2022-08-11T15:38:53,392 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-08-11T15:38:53,393 renderable = cast_method() 2022-08-11T15:38:53,393 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-08-11T15:38:53,393 pip_cmd = get_best_invocation_for_this_pip() 2022-08-11T15:38:53,394 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-08-11T15:38:53,394 os.path.join(binary_prefix, exe_name), 2022-08-11T15:38:53,394 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-08-11T15:38:53,395 s2 = os.stat(f2) 2022-08-11T15:38:53,395 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-08-11T15:38:53,395 Call stack: 2022-08-11T15:38:53,396 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-08-11T15:38:53,396 "__main__", mod_spec) 2022-08-11T15:38:53,396 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-08-11T15:38:53,397 exec(code, run_globals) 2022-08-11T15:38:53,397 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/__main__.py", line 31, in 2022-08-11T15:38:53,397 sys.exit(_main()) 2022-08-11T15:38:53,397 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-08-11T15:38:53,398 return command.main(cmd_args) 2022-08-11T15:38:53,398 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-08-11T15:38:53,398 return self._main(args) 2022-08-11T15:38:53,399 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-08-11T15:38:53,399 self.handle_pip_version_check(options) 2022-08-11T15:38:53,399 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-08-11T15:38:53,400 pip_self_version_check(session, options) 2022-08-11T15:38:53,400 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-08-11T15:38:53,400 logger.info("[present-rich] %s", upgrade_prompt) 2022-08-11T15:38:53,401 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-08-11T15:38:53,401 self._log(INFO, msg, args, **kwargs) 2022-08-11T15:38:53,401 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-08-11T15:38:53,401 self.handle(record) 2022-08-11T15:38:53,402 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-08-11T15:38:53,402 self.callHandlers(record) 2022-08-11T15:38:53,402 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-08-11T15:38:53,403 hdlr.handle(record) 2022-08-11T15:38:53,403 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-08-11T15:38:53,403 self.emit(record) 2022-08-11T15:38:53,404 File "/tmp/pip-standalone-pip-3wrsk0i2/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-08-11T15:38:53,404 self.handleError(record) 2022-08-11T15:38:53,404 Message: '[present-rich] %s' 2022-08-11T15:38:53,405 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-08-11T15:38:53,897 Installing build dependencies: finished with status 'done' 2022-08-11T15:38:53,924 Getting requirements to build wheel: started 2022-08-11T15:38:53,926 Running command Getting requirements to build wheel 2022-08-11T15:38:56,320 Getting requirements to build wheel: finished with status 'done' 2022-08-11T15:38:56,352 Created temporary directory: /tmp/pip-modern-metadata-zib0764x 2022-08-11T15:38:56,358 Preparing metadata (pyproject.toml): started 2022-08-11T15:38:56,360 Running command Preparing metadata (pyproject.toml) 2022-08-11T15:39:01,121 running dist_info 2022-08-11T15:39:01,774 creating /tmp/pip-modern-metadata-zib0764x/mmdf.egg-info 2022-08-11T15:39:02,400 writing /tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/PKG-INFO 2022-08-11T15:39:02,988 writing dependency_links to /tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/dependency_links.txt 2022-08-11T15:39:05,912 writing requirements to /tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/requires.txt 2022-08-11T15:39:06,499 writing top-level names to /tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/top_level.txt 2022-08-11T15:39:06,501 writing manifest file '/tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/SOURCES.txt' 2022-08-11T15:39:07,290 listing git files failed - pretending there aren't any 2022-08-11T15:39:07,309 reading manifest file '/tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/SOURCES.txt' 2022-08-11T15:39:07,313 adding license file 'LICENSE' 2022-08-11T15:39:07,319 writing manifest file '/tmp/pip-modern-metadata-zib0764x/mmdf.egg-info/SOURCES.txt' 2022-08-11T15:39:07,322 creating '/tmp/pip-modern-metadata-zib0764x/mmdf-0.0.1.dist-info' 2022-08-11T15:39:07,574 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-11T15:39:07,821 Preparing metadata (pyproject.toml): finished with status 'done' 2022-08-11T15:39:07,836 Source in /tmp/pip-wheel-4uz9qaus/mmdf_d87e1c7296b542a29e64ca9efc558dbb has version 0.0.1, which satisfies requirement mmdf==0.0.1 from https://files.pythonhosted.org/packages/97/24/31439e285d95e46c0e551a8f85ecf9b4e8c086a32b1228b11e74337e28b9/mmdf-0.0.1.tar.gz#sha256=0a0d7f8d5b39b1c859c324f16d28ed0db5b5502a7db0516e390b1cd14a458f9f 2022-08-11T15:39:07,838 Removed mmdf==0.0.1 from https://files.pythonhosted.org/packages/97/24/31439e285d95e46c0e551a8f85ecf9b4e8c086a32b1228b11e74337e28b9/mmdf-0.0.1.tar.gz#sha256=0a0d7f8d5b39b1c859c324f16d28ed0db5b5502a7db0516e390b1cd14a458f9f from build tracker '/tmp/pip-build-tracker-lanwa89f' 2022-08-11T15:39:07,851 Created temporary directory: /tmp/pip-unpack-cf3bx_pu 2022-08-11T15:39:07,852 Building wheels for collected packages: mmdf 2022-08-11T15:39:07,862 Created temporary directory: /tmp/pip-wheel-258w7e0g 2022-08-11T15:39:07,863 Destination directory: /tmp/pip-wheel-258w7e0g 2022-08-11T15:39:07,869 Building wheel for mmdf (pyproject.toml): started 2022-08-11T15:39:07,871 Running command Building wheel for mmdf (pyproject.toml) 2022-08-11T15:39:12,208 running bdist_wheel 2022-08-11T15:39:13,470 running build 2022-08-11T15:39:13,471 running build_py 2022-08-11T15:39:14,102 creating build 2022-08-11T15:39:14,102 creating build/lib 2022-08-11T15:39:14,103 creating build/lib/mmdf 2022-08-11T15:39:14,105 copying mmdf/functions.py -> build/lib/mmdf 2022-08-11T15:39:14,108 copying mmdf/gemmi.py -> build/lib/mmdf 2022-08-11T15:39:14,111 copying mmdf/_version.py -> build/lib/mmdf 2022-08-11T15:39:14,114 copying mmdf/__init__.py -> build/lib/mmdf 2022-08-11T15:39:15,380 installing to build/bdist.linux-armv7l/wheel 2022-08-11T15:39:15,380 running install 2022-08-11T15:39:15,446 running install_lib 2022-08-11T15:39:16,080 creating build/bdist.linux-armv7l 2022-08-11T15:39:16,081 creating build/bdist.linux-armv7l/wheel 2022-08-11T15:39:16,084 creating build/bdist.linux-armv7l/wheel/mmdf 2022-08-11T15:39:16,086 copying build/lib/mmdf/functions.py -> build/bdist.linux-armv7l/wheel/mmdf 2022-08-11T15:39:16,089 copying build/lib/mmdf/gemmi.py -> build/bdist.linux-armv7l/wheel/mmdf 2022-08-11T15:39:16,093 copying build/lib/mmdf/_version.py -> build/bdist.linux-armv7l/wheel/mmdf 2022-08-11T15:39:16,096 copying build/lib/mmdf/__init__.py -> build/bdist.linux-armv7l/wheel/mmdf 2022-08-11T15:39:16,099 running install_egg_info 2022-08-11T15:39:17,440 running egg_info 2022-08-11T15:39:18,074 writing mmdf.egg-info/PKG-INFO 2022-08-11T15:39:18,667 writing dependency_links to mmdf.egg-info/dependency_links.txt 2022-08-11T15:39:21,639 writing requirements to mmdf.egg-info/requires.txt 2022-08-11T15:39:22,228 writing top-level names to mmdf.egg-info/top_level.txt 2022-08-11T15:39:22,344 listing git files failed - pretending there aren't any 2022-08-11T15:39:22,362 reading manifest file 'mmdf.egg-info/SOURCES.txt' 2022-08-11T15:39:22,368 adding license file 'LICENSE' 2022-08-11T15:39:22,375 writing manifest file 'mmdf.egg-info/SOURCES.txt' 2022-08-11T15:39:22,378 Copying mmdf.egg-info to build/bdist.linux-armv7l/wheel/mmdf-0.0.1-py3.7.egg-info 2022-08-11T15:39:22,402 running install_scripts 2022-08-11T15:39:22,587 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-11T15:39:22,595 creating build/bdist.linux-armv7l/wheel/mmdf-0.0.1.dist-info/WHEEL 2022-08-11T15:39:22,600 creating '/tmp/pip-wheel-258w7e0g/tmphp16v19o/mmdf-0.0.1-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-11T15:39:22,604 adding 'mmdf/__init__.py' 2022-08-11T15:39:22,607 adding 'mmdf/_version.py' 2022-08-11T15:39:22,609 adding 'mmdf/functions.py' 2022-08-11T15:39:22,611 adding 'mmdf/gemmi.py' 2022-08-11T15:39:22,616 adding 'mmdf-0.0.1.dist-info/LICENSE' 2022-08-11T15:39:22,618 adding 'mmdf-0.0.1.dist-info/METADATA' 2022-08-11T15:39:22,620 adding 'mmdf-0.0.1.dist-info/WHEEL' 2022-08-11T15:39:22,621 adding 'mmdf-0.0.1.dist-info/top_level.txt' 2022-08-11T15:39:22,623 adding 'mmdf-0.0.1.dist-info/RECORD' 2022-08-11T15:39:22,624 removing build/bdist.linux-armv7l/wheel 2022-08-11T15:39:22,915 Building wheel for mmdf (pyproject.toml): finished with status 'done' 2022-08-11T15:39:22,926 Created wheel for mmdf: filename=mmdf-0.0.1-py2.py3-none-any.whl size=3913 sha256=f953673dc81236a804244a05252c118b6b55da21acaa5f7d52f4fc1054a60ed3 2022-08-11T15:39:22,928 Stored in directory: /tmp/pip-ephem-wheel-cache-pk6fddje/wheels/ed/7c/dd/1b6b0dfbba819c9719e4d81ac76dec07018fb55d64716bbd43 2022-08-11T15:39:22,949 Successfully built mmdf 2022-08-11T15:39:22,956 Removed build tracker: '/tmp/pip-build-tracker-lanwa89f'