2022-08-19T15:27:09,413 Created temporary directory: /tmp/pip-ephem-wheel-cache-5ikq6kap 2022-08-19T15:27:09,419 Created temporary directory: /tmp/pip-build-tracker-5i8w8ifn 2022-08-19T15:27:09,420 Initialized build tracking at /tmp/pip-build-tracker-5i8w8ifn 2022-08-19T15:27:09,420 Created build tracker: /tmp/pip-build-tracker-5i8w8ifn 2022-08-19T15:27:09,421 Entered build tracker: /tmp/pip-build-tracker-5i8w8ifn 2022-08-19T15:27:09,422 Created temporary directory: /tmp/pip-wheel-odu1kg86 2022-08-19T15:27:09,489 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-19T15:27:09,497 2 location(s) to search for versions of ga4gh-vrs: 2022-08-19T15:27:09,497 * https://pypi.org/simple/ga4gh-vrs/ 2022-08-19T15:27:09,497 * https://www.piwheels.org/simple/ga4gh-vrs/ 2022-08-19T15:27:09,498 Fetching project page and analyzing links: https://pypi.org/simple/ga4gh-vrs/ 2022-08-19T15:27:09,499 Getting page https://pypi.org/simple/ga4gh-vrs/ 2022-08-19T15:27:09,502 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(requires-python:>=3.6), version: 0.7.5 2022-08-19T15:27:09,769 Skipping link: No binaries permitted for ga4gh-vrs: https://files.pythonhosted.org/packages/9a/b0/292e880f3310e14ac10b058ea5eef60863285403b789bcb0cef1e5946714/ga4gh.vrs-0.7.6-py2.py3-none-any.whl#sha256=3c00e0092183619572210f4cd983d86d817d27b22b69cab69c650b0e5f4057b6 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:09,770 Found link https://files.pythonhosted.org/packages/11/12/9c45b18a228487bcc67ced64a047a59fdb8e92c790888d1c3a8c3444af9c/ga4gh.vrs-0.7.6.tar.gz#sha256=f049dfff5c2cc0fd07fb4e8aa310896dfec3cc9c0cb4e126e53fe3ef49891e66 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.7.6 2022-08-19T15:27:09,771 Skipping link: No binaries permitted for ga4gh-vrs: 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2022-08-19T15:27:09,775 Found link https://files.pythonhosted.org/packages/b3/18/d4ce78ab6c5e07d2e633b80e528b916b7c983165b55068afc77b86779210/ga4gh.vrs-0.8.0.dev1.tar.gz#sha256=fac0e7bdd0ecb5809ea0307f70e5bbf19ff7cded6ebd809542cf3f050fbdba1c (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.8.0.dev1 2022-08-19T15:27:09,775 Skipping link: No binaries permitted for ga4gh-vrs: https://files.pythonhosted.org/packages/cd/a4/dd4c93f6378bd6f6b2ad75ceb4ffd9e748a0faaf6c33746c36efb9e065f0/ga4gh.vrs-0.8a0-py2.py3-none-any.whl#sha256=ec4130ba373af9be18488b644204d3a75894c1f2a2af162970a103c2591ca360 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:09,777 Found link https://files.pythonhosted.org/packages/1b/b0/03860b80207d39a6fa3d120fe28c49d6918e7dce62911be505a0ea2c3fbe/ga4gh.vrs-0.8a0.tar.gz#sha256=82b5a6e5f05651d6a27b3d7b4b34390ca9ff93a2820ac3d2557d9420116ea6eb (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.8a0 2022-08-19T15:27:09,777 Skipping link: No binaries permitted for ga4gh-vrs: https://files.pythonhosted.org/packages/82/4e/482f26e093f9e2affaf5b59060dd3ab2132c60d620d48570f3bde656e31e/ga4gh.vrs-0.8.1.dev0-py2.py3-none-any.whl#sha256=0453543b68c8d339538e0cd62baa34265d4b7c15ba7bb58857521f342a1de0fa (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:09,779 Found link https://files.pythonhosted.org/packages/f8/7a/eb7a2ed63db82141c218783836c5bbac1b617ea273f03bcb153455cd7a53/ga4gh.vrs-0.8.1.dev0.tar.gz#sha256=ca6bf7614ae70e6cb0f62ec1771e521485e726b3bc44174456ba6b9e04c59625 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.8.1.dev0 2022-08-19T15:27:09,779 Skipping link: No binaries permitted for ga4gh-vrs: https://files.pythonhosted.org/packages/2c/dd/e3e23111dee4957d5b1ee6898d088495305fa456681db299ff7eccb0ded1/ga4gh.vrs-0.8.4.dev0-py2.py3-none-any.whl#sha256=46c733b577b62cd76238bac2b9f3ec6a52dffe333a4ba663a824afab5be11117 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:09,781 Found link https://files.pythonhosted.org/packages/51/d4/fd53b17129029465794e21e4bff969e693ac994fce4330f4af47e33eac69/ga4gh.vrs-0.8.4.dev0.tar.gz#sha256=fae10fd24e57f029742c1702d4dbd3526cb87d603fd3db93b187c7723d03ee78 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.8.4.dev0 2022-08-19T15:27:09,781 Skipping link: No binaries permitted for ga4gh-vrs: https://files.pythonhosted.org/packages/20/7b/726a498c020070226c458417b5b365b297badd716a78f8912bc2ebe6dc99/ga4gh.vrs-0.8.5.dev0-py2.py3-none-any.whl#sha256=d06f1c17f391c0d8ecad6588f91b22d506c43a9ad7fcadffdc8d4cdea8ce3c49 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:09,783 Found link https://files.pythonhosted.org/packages/bb/e0/8c7c9b9989203ba3e3e46b1d9cf539f1480eb5bc77e4cd229b6de64e6e92/ga4gh.vrs-0.8.5.dev0.tar.gz#sha256=8b5c7911e3a2eaaa42ddc1132fea2b46780b3cd1ed5062038cc3862d1146c55d (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.8.5.dev0 2022-08-19T15:27:09,783 Skipping link: No binaries permitted for ga4gh-vrs: https://files.pythonhosted.org/packages/fb/c5/4474c6ce38aca2864116b7a587f63b5ff45c176ed78e56836f911a49a5f2/ga4gh.vrs-0.8.6.dev0-py2.py3-none-any.whl#sha256=b963300e5111ef72f55af264db6e30a1dbd06f45e26758586e3f478bc6895507 (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:09,785 Found link https://files.pythonhosted.org/packages/16/91/14ce5f34eae9d74b6406c96a78f4c2182f997f13453943cc2e5c8acf82f6/ga4gh.vrs-0.8.6.dev0.tar.gz#sha256=37c1eb128e749ad0b76e4f4e796fb37947ebc8291f6f7f5e03650242f051d0ad (from https://pypi.org/simple/ga4gh-vrs/) (requires-python:>=3.6), version: 0.8.6.dev0 2022-08-19T15:27:09,786 Fetching project page and analyzing links: https://www.piwheels.org/simple/ga4gh-vrs/ 2022-08-19T15:27:09,786 Getting page https://www.piwheels.org/simple/ga4gh-vrs/ 2022-08-19T15:27:09,788 Found index url https://www.piwheels.org/simple 2022-08-19T15:27:10,044 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.8.5.dev0-py2.py3-none-any.whl#sha256=d25b4fd551eceaf8103a1093cb283b76e3269fc26978284a56cd501c089cf8d2 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,044 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.8.4.dev0-py2.py3-none-any.whl#sha256=580df155e17de62c80087a61b34562e3c288c73174c5c53bd9355c4c5299e994 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,045 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.8.1.dev0-py2.py3-none-any.whl#sha256=1428e445bb08d7c6660aed53497675f2449cb39d8bdd72e61a1bc74a05d5acf4 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,046 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.8a0-py2.py3-none-any.whl#sha256=5177887fb1f23add4b0ea7823398569dc6c4c57431466f883ba022410ed5363e (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,046 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.8.0.dev1-py2.py3-none-any.whl#sha256=ae4d9318d03a6b3fba6a665685ef5897a978b7a0b076d56b5cf186ba5726bc16 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,047 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.8.0.dev0-py2.py3-none-any.whl#sha256=d84edc3c4926502cadb088792273d7cdcf43567537e5f71074b4bc4e35e0ca31 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,047 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.6-py2.py3-none-any.whl#sha256=cdc678bb92ee79eeb7a73c19cb4d1bbcea813a6319fe804e7a1d1c23988d529d (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,048 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.5-py2.py3-none-any.whl#sha256=23c814dfdee04d6f3deb7b82e31e55cd13f78b6ec23481c237d30d13d7fb846c (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,048 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.5.dev1-py2.py3-none-any.whl#sha256=043d0499718c371c9864d4a05d870f4355b5928ba8f709351af268b25f31feee (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,049 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.5.dev0-py2.py3-none-any.whl#sha256=33cb103a2f98955e925103f16582aab135db999196fd3706d4434e630dc9af42 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,049 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.4-py2.py3-none-any.whl#sha256=930d0adc2c2a52b0a70bede66207a146a45878b6e0f131a0438024d779c768c3 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,050 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.3-py2.py3-none-any.whl#sha256=1fd24beb743e5a51a919394d858bd7e5caae5ade7db1c9df3b9bb9c356c68944 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,050 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.2-py2.py3-none-any.whl#sha256=55b8b9593024471a8108529ebad9f842835559c01e14bfd377660914d0e39dd2 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,051 Skipping link: No binaries permitted for ga4gh-vrs: https://www.piwheels.org/simple/ga4gh-vrs/ga4gh.vrs-0.7.1-py2.py3-none-any.whl#sha256=4eed3cebd00ce9d03f8284a183cf5eb25b298f72dd285c77e64f3c336c702438 (from https://www.piwheels.org/simple/ga4gh-vrs/) (requires-python:>=3.6) 2022-08-19T15:27:10,051 Skipping link: not a file: https://www.piwheels.org/simple/ga4gh-vrs/ 2022-08-19T15:27:10,052 Skipping link: not a file: https://pypi.org/simple/ga4gh-vrs/ 2022-08-19T15:27:10,091 Given no hashes to check 1 links for project 'ga4gh-vrs': discarding no candidates 2022-08-19T15:27:10,121 Collecting ga4gh-vrs==0.8.6.dev0 2022-08-19T15:27:10,126 Created temporary directory: /tmp/pip-unpack-8ily77tt 2022-08-19T15:27:11,733 Downloading ga4gh.vrs-0.8.6.dev0.tar.gz (17.1 MB) 2022-08-19T15:27:17,246 Added ga4gh-vrs==0.8.6.dev0 from https://files.pythonhosted.org/packages/16/91/14ce5f34eae9d74b6406c96a78f4c2182f997f13453943cc2e5c8acf82f6/ga4gh.vrs-0.8.6.dev0.tar.gz#sha256=37c1eb128e749ad0b76e4f4e796fb37947ebc8291f6f7f5e03650242f051d0ad to build tracker '/tmp/pip-build-tracker-5i8w8ifn' 2022-08-19T15:27:17,249 Running setup.py (path:/tmp/pip-wheel-odu1kg86/ga4gh-vrs_fb9c20a7ff974087afa14e6fcdb39af1/setup.py) egg_info for package ga4gh-vrs 2022-08-19T15:27:17,250 Created temporary directory: /tmp/pip-pip-egg-info-mta7c18c 2022-08-19T15:27:17,251 Preparing metadata (setup.py): started 2022-08-19T15:27:17,253 Running command python setup.py egg_info 2022-08-19T15:27:56,831 running egg_info 2022-08-19T15:27:56,836 creating /tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info 2022-08-19T15:27:57,546 writing /tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/PKG-INFO 2022-08-19T15:27:58,135 writing dependency_links to /tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/dependency_links.txt 2022-08-19T15:28:01,067 writing requirements to /tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/requires.txt 2022-08-19T15:28:01,714 writing top-level names to /tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/top_level.txt 2022-08-19T15:28:01,717 writing manifest file '/tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/SOURCES.txt' 2022-08-19T15:28:02,565 /usr/local/lib/python3.7/dist-packages/setuptools/config/expand.py:144: UserWarning: File '/tmp/pip-wheel-odu1kg86/ga4gh-vrs_fb9c20a7ff974087afa14e6fcdb39af1/README.rst' cannot be found 2022-08-19T15:28:02,565 warnings.warn(f"File {path!r} cannot be found") 2022-08-19T15:28:02,565 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-08-19T15:28:02,566 warnings.warn(msg, warning_class) 2022-08-19T15:28:02,566 /usr/local/lib/python3.7/dist-packages/setuptools/installer.py:30: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. 2022-08-19T15:28:02,566 SetuptoolsDeprecationWarning, 2022-08-19T15:28:02,567 package init file 'src/ga4gh/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,572 package init file 'src/ga4gh/core/_internal/data/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,573 package init file 'src/ga4gh/core/_internal/data/schemas/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,575 package init file 'src/ga4gh/core/_internal/data/schemas/vrsatile/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,576 package init file 'src/ga4gh/core/_internal/data/schemas/vrs/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,580 package init file 'src/ga4gh/vrs/_internal/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,581 package init file 'src/ga4gh/vrs/utils/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,583 package init file 'src/ga4gh/vrs/_internal/data/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,584 package init file 'src/ga4gh/vrs/_internal/data/schemas/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,585 package init file 'src/ga4gh/vrs/_internal/data/schemas/vrsatile/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,587 package init file 'src/ga4gh/vrs/_internal/data/schemas/vrs/__init__.py' not found (or not a regular file) 2022-08-19T15:28:02,883 listing git files failed - pretending there aren't any 2022-08-19T15:28:02,906 reading manifest file '/tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/SOURCES.txt' 2022-08-19T15:28:02,910 reading manifest template 'MANIFEST.in' 2022-08-19T15:28:02,917 adding license file 'LICENSE' 2022-08-19T15:28:02,924 writing manifest file '/tmp/pip-pip-egg-info-mta7c18c/ga4gh.vrs.egg-info/SOURCES.txt' 2022-08-19T15:28:03,168 Preparing metadata (setup.py): finished with status 'done' 2022-08-19T15:28:03,179 Source in /tmp/pip-wheel-odu1kg86/ga4gh-vrs_fb9c20a7ff974087afa14e6fcdb39af1 has version 0.8.6.dev0, which satisfies requirement ga4gh-vrs==0.8.6.dev0 from https://files.pythonhosted.org/packages/16/91/14ce5f34eae9d74b6406c96a78f4c2182f997f13453943cc2e5c8acf82f6/ga4gh.vrs-0.8.6.dev0.tar.gz#sha256=37c1eb128e749ad0b76e4f4e796fb37947ebc8291f6f7f5e03650242f051d0ad 2022-08-19T15:28:03,181 Removed ga4gh-vrs==0.8.6.dev0 from https://files.pythonhosted.org/packages/16/91/14ce5f34eae9d74b6406c96a78f4c2182f997f13453943cc2e5c8acf82f6/ga4gh.vrs-0.8.6.dev0.tar.gz#sha256=37c1eb128e749ad0b76e4f4e796fb37947ebc8291f6f7f5e03650242f051d0ad from build tracker '/tmp/pip-build-tracker-5i8w8ifn' 2022-08-19T15:28:03,194 Created temporary directory: /tmp/pip-unpack-fmzk1k3k 2022-08-19T15:28:03,196 Building wheels for collected packages: ga4gh-vrs 2022-08-19T15:28:03,205 Created temporary directory: /tmp/pip-wheel-d50n214g 2022-08-19T15:28:03,206 Building wheel for ga4gh-vrs (setup.py): started 2022-08-19T15:28:03,207 Destination directory: /tmp/pip-wheel-d50n214g 2022-08-19T15:28:03,208 Running command python setup.py bdist_wheel 2022-08-19T15:28:06,042 /usr/local/lib/python3.7/dist-packages/setuptools/config/expand.py:144: UserWarning: File '/tmp/pip-wheel-odu1kg86/ga4gh-vrs_fb9c20a7ff974087afa14e6fcdb39af1/README.rst' cannot be found 2022-08-19T15:28:06,043 warnings.warn(f"File {path!r} cannot be found") 2022-08-19T15:28:06,044 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-08-19T15:28:06,044 warnings.warn(msg, warning_class) 2022-08-19T15:28:06,691 /usr/local/lib/python3.7/dist-packages/setuptools/installer.py:30: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. 2022-08-19T15:28:06,691 SetuptoolsDeprecationWarning, 2022-08-19T15:28:12,852 running bdist_wheel 2022-08-19T15:28:13,224 running build 2022-08-19T15:28:13,224 running build_py 2022-08-19T15:28:13,960 package init file 'src/ga4gh/__init__.py' not found (or not a regular file) 2022-08-19T15:28:13,964 creating build 2022-08-19T15:28:13,964 creating build/lib 2022-08-19T15:28:13,965 creating build/lib/ga4gh 2022-08-19T15:28:13,967 creating build/lib/ga4gh/core 2022-08-19T15:28:13,969 copying src/ga4gh/core/__init__.py -> build/lib/ga4gh/core 2022-08-19T15:28:13,974 creating build/lib/ga4gh/vrs 2022-08-19T15:28:13,976 copying src/ga4gh/vrs/normalize.py -> build/lib/ga4gh/vrs 2022-08-19T15:28:13,979 copying src/ga4gh/vrs/dataproxy.py -> build/lib/ga4gh/vrs 2022-08-19T15:28:13,984 copying src/ga4gh/vrs/__init__.py -> build/lib/ga4gh/vrs 2022-08-19T15:28:13,989 creating build/lib/ga4gh/core/_internal 2022-08-19T15:28:13,991 copying src/ga4gh/core/_internal/enderef.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:13,995 copying src/ga4gh/core/_internal/identifiers.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:13,999 copying src/ga4gh/core/_internal/digests.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:14,002 copying src/ga4gh/core/_internal/jsonschema.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:14,007 copying src/ga4gh/core/_internal/exceptions.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:14,010 copying src/ga4gh/core/_internal/helpers.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:14,014 copying src/ga4gh/core/_internal/__init__.py -> build/lib/ga4gh/core/_internal 2022-08-19T15:28:14,016 package init file 'src/ga4gh/core/_internal/data/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,017 package init file 'src/ga4gh/core/_internal/data/schemas/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,018 package init file 'src/ga4gh/core/_internal/data/schemas/vrsatile/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,020 creating build/lib/ga4gh/core/_internal/data 2022-08-19T15:28:14,021 creating build/lib/ga4gh/core/_internal/data/schemas 2022-08-19T15:28:14,022 creating build/lib/ga4gh/core/_internal/data/schemas/vrsatile 2022-08-19T15:28:14,024 copying src/ga4gh/core/_internal/data/schemas/vrsatile/helpers.py -> build/lib/ga4gh/core/_internal/data/schemas/vrsatile 2022-08-19T15:28:14,028 package init file 'src/ga4gh/core/_internal/data/schemas/vrs/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,030 creating build/lib/ga4gh/core/_internal/data/schemas/vrs 2022-08-19T15:28:14,031 copying src/ga4gh/core/_internal/data/schemas/vrs/helpers.py -> build/lib/ga4gh/core/_internal/data/schemas/vrs 2022-08-19T15:28:14,037 creating build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,038 copying src/ga4gh/vrs/extras/vcf_annotation.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,043 copying src/ga4gh/vrs/extras/decorators.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,046 copying src/ga4gh/vrs/extras/translator.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,051 copying src/ga4gh/vrs/extras/localizer.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,055 copying src/ga4gh/vrs/extras/__init__.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,058 copying src/ga4gh/vrs/extras/variation_normalizer_rest_dp.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,061 copying src/ga4gh/vrs/extras/utils.py -> build/lib/ga4gh/vrs/extras 2022-08-19T15:28:14,064 package init file 'src/ga4gh/vrs/_internal/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,066 creating build/lib/ga4gh/vrs/_internal 2022-08-19T15:28:14,068 copying src/ga4gh/vrs/_internal/enderef.py -> build/lib/ga4gh/vrs/_internal 2022-08-19T15:28:14,071 copying src/ga4gh/vrs/_internal/models.py -> build/lib/ga4gh/vrs/_internal 2022-08-19T15:28:14,075 package init file 'src/ga4gh/vrs/utils/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,076 creating build/lib/ga4gh/vrs/utils 2022-08-19T15:28:14,078 copying src/ga4gh/vrs/utils/hgvs_tools.py -> build/lib/ga4gh/vrs/utils 2022-08-19T15:28:14,081 package init file 'src/ga4gh/vrs/_internal/data/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,082 package init file 'src/ga4gh/vrs/_internal/data/schemas/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,084 package init file 'src/ga4gh/vrs/_internal/data/schemas/vrsatile/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,086 creating build/lib/ga4gh/vrs/_internal/data 2022-08-19T15:28:14,086 creating build/lib/ga4gh/vrs/_internal/data/schemas 2022-08-19T15:28:14,087 creating build/lib/ga4gh/vrs/_internal/data/schemas/vrsatile 2022-08-19T15:28:14,090 copying src/ga4gh/vrs/_internal/data/schemas/vrsatile/helpers.py -> build/lib/ga4gh/vrs/_internal/data/schemas/vrsatile 2022-08-19T15:28:14,093 package init file 'src/ga4gh/vrs/_internal/data/schemas/vrs/__init__.py' not found (or not a regular file) 2022-08-19T15:28:14,095 creating build/lib/ga4gh/vrs/_internal/data/schemas/vrs 2022-08-19T15:28:14,096 copying src/ga4gh/vrs/_internal/data/schemas/vrs/helpers.py -> build/lib/ga4gh/vrs/_internal/data/schemas/vrs 2022-08-19T15:28:14,100 running egg_info 2022-08-19T15:28:15,535 writing src/ga4gh.vrs.egg-info/PKG-INFO 2022-08-19T15:28:16,121 writing dependency_links to src/ga4gh.vrs.egg-info/dependency_links.txt 2022-08-19T15:28:19,128 writing requirements to src/ga4gh.vrs.egg-info/requires.txt 2022-08-19T15:28:19,715 writing top-level names to src/ga4gh.vrs.egg-info/top_level.txt 2022-08-19T15:28:20,028 listing git files failed - pretending there aren't any 2022-08-19T15:28:20,046 reading manifest file 'src/ga4gh.vrs.egg-info/SOURCES.txt' 2022-08-19T15:28:20,099 reading manifest template 'MANIFEST.in' 2022-08-19T15:28:20,103 adding license file 'LICENSE' 2022-08-19T15:28:20,124 writing manifest file 'src/ga4gh.vrs.egg-info/SOURCES.txt' 2022-08-19T15:28:20,890 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-08-19T15:28:20,891 setuptools.SetuptoolsDeprecationWarning, 2022-08-19T15:28:21,624 installing to build/bdist.linux-armv7l/wheel 2022-08-19T15:28:21,624 running install 2022-08-19T15:28:21,689 running install_lib 2022-08-19T15:28:22,425 creating build/bdist.linux-armv7l 2022-08-19T15:28:22,426 creating build/bdist.linux-armv7l/wheel 2022-08-19T15:28:22,429 creating build/bdist.linux-armv7l/wheel/ga4gh 2022-08-19T15:28:22,432 creating build/bdist.linux-armv7l/wheel/ga4gh/core 2022-08-19T15:28:22,434 copying build/lib/ga4gh/core/__init__.py -> build/bdist.linux-armv7l/wheel/ga4gh/core 2022-08-19T15:28:22,439 creating build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,440 copying build/lib/ga4gh/core/_internal/enderef.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,444 copying build/lib/ga4gh/core/_internal/identifiers.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,448 copying build/lib/ga4gh/core/_internal/digests.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,452 copying build/lib/ga4gh/core/_internal/jsonschema.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,457 creating build/bdist.linux-armv7l/wheel/ga4gh/core/_internal/data 2022-08-19T15:28:22,459 creating build/bdist.linux-armv7l/wheel/ga4gh/core/_internal/data/schemas 2022-08-19T15:28:22,462 creating build/bdist.linux-armv7l/wheel/ga4gh/core/_internal/data/schemas/vrsatile 2022-08-19T15:28:22,464 copying build/lib/ga4gh/core/_internal/data/schemas/vrsatile/helpers.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal/data/schemas/vrsatile 2022-08-19T15:28:22,469 creating build/bdist.linux-armv7l/wheel/ga4gh/core/_internal/data/schemas/vrs 2022-08-19T15:28:22,470 copying build/lib/ga4gh/core/_internal/data/schemas/vrs/helpers.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal/data/schemas/vrs 2022-08-19T15:28:22,474 copying build/lib/ga4gh/core/_internal/exceptions.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,477 copying build/lib/ga4gh/core/_internal/helpers.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,480 copying build/lib/ga4gh/core/_internal/__init__.py -> build/bdist.linux-armv7l/wheel/ga4gh/core/_internal 2022-08-19T15:28:22,484 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs 2022-08-19T15:28:22,486 copying build/lib/ga4gh/vrs/normalize.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs 2022-08-19T15:28:22,489 copying build/lib/ga4gh/vrs/dataproxy.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs 2022-08-19T15:28:22,495 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,496 copying build/lib/ga4gh/vrs/extras/vcf_annotation.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,501 copying build/lib/ga4gh/vrs/extras/decorators.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,505 copying build/lib/ga4gh/vrs/extras/translator.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,510 copying build/lib/ga4gh/vrs/extras/localizer.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,513 copying build/lib/ga4gh/vrs/extras/__init__.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,516 copying build/lib/ga4gh/vrs/extras/variation_normalizer_rest_dp.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,519 copying build/lib/ga4gh/vrs/extras/utils.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/extras 2022-08-19T15:28:22,523 copying build/lib/ga4gh/vrs/__init__.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs 2022-08-19T15:28:22,527 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal 2022-08-19T15:28:22,528 copying build/lib/ga4gh/vrs/_internal/enderef.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal 2022-08-19T15:28:22,532 copying build/lib/ga4gh/vrs/_internal/models.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal 2022-08-19T15:28:22,536 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal/data 2022-08-19T15:28:22,539 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal/data/schemas 2022-08-19T15:28:22,541 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal/data/schemas/vrsatile 2022-08-19T15:28:22,543 copying build/lib/ga4gh/vrs/_internal/data/schemas/vrsatile/helpers.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal/data/schemas/vrsatile 2022-08-19T15:28:22,548 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal/data/schemas/vrs 2022-08-19T15:28:22,549 copying build/lib/ga4gh/vrs/_internal/data/schemas/vrs/helpers.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/_internal/data/schemas/vrs 2022-08-19T15:28:22,554 creating build/bdist.linux-armv7l/wheel/ga4gh/vrs/utils 2022-08-19T15:28:22,555 copying build/lib/ga4gh/vrs/utils/hgvs_tools.py -> build/bdist.linux-armv7l/wheel/ga4gh/vrs/utils 2022-08-19T15:28:22,558 running install_egg_info 2022-08-19T15:28:23,279 Copying src/ga4gh.vrs.egg-info to build/bdist.linux-armv7l/wheel/ga4gh.vrs-0.8.6.dev0-py3.7.egg-info 2022-08-19T15:28:23,304 running install_scripts 2022-08-19T15:28:23,550 creating build/bdist.linux-armv7l/wheel/ga4gh.vrs-0.8.6.dev0.dist-info/WHEEL 2022-08-19T15:28:23,555 creating '/tmp/pip-wheel-d50n214g/ga4gh.vrs-0.8.6.dev0-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-19T15:28:23,560 adding 'ga4gh/core/__init__.py' 2022-08-19T15:28:23,564 adding 'ga4gh/core/_internal/__init__.py' 2022-08-19T15:28:23,566 adding 'ga4gh/core/_internal/digests.py' 2022-08-19T15:28:23,569 adding 'ga4gh/core/_internal/enderef.py' 2022-08-19T15:28:23,571 adding 'ga4gh/core/_internal/exceptions.py' 2022-08-19T15:28:23,574 adding 'ga4gh/core/_internal/helpers.py' 2022-08-19T15:28:23,577 adding 'ga4gh/core/_internal/identifiers.py' 2022-08-19T15:28:23,580 adding 'ga4gh/core/_internal/jsonschema.py' 2022-08-19T15:28:23,585 adding 'ga4gh/core/_internal/data/schemas/vrs/helpers.py' 2022-08-19T15:28:23,589 adding 'ga4gh/core/_internal/data/schemas/vrsatile/helpers.py' 2022-08-19T15:28:23,592 adding 'ga4gh/vrs/__init__.py' 2022-08-19T15:28:23,596 adding 'ga4gh/vrs/dataproxy.py' 2022-08-19T15:28:23,599 adding 'ga4gh/vrs/normalize.py' 2022-08-19T15:28:23,602 adding 'ga4gh/vrs/_internal/enderef.py' 2022-08-19T15:28:23,605 adding 'ga4gh/vrs/_internal/models.py' 2022-08-19T15:28:23,610 adding 'ga4gh/vrs/_internal/data/schemas/vrs/helpers.py' 2022-08-19T15:28:23,613 adding 'ga4gh/vrs/_internal/data/schemas/vrsatile/helpers.py' 2022-08-19T15:28:23,617 adding 'ga4gh/vrs/extras/__init__.py' 2022-08-19T15:28:23,619 adding 'ga4gh/vrs/extras/decorators.py' 2022-08-19T15:28:23,621 adding 'ga4gh/vrs/extras/localizer.py' 2022-08-19T15:28:23,627 adding 'ga4gh/vrs/extras/translator.py' 2022-08-19T15:28:23,630 adding 'ga4gh/vrs/extras/utils.py' 2022-08-19T15:28:23,632 adding 'ga4gh/vrs/extras/variation_normalizer_rest_dp.py' 2022-08-19T15:28:23,635 adding 'ga4gh/vrs/extras/vcf_annotation.py' 2022-08-19T15:28:23,638 adding 'ga4gh/vrs/utils/hgvs_tools.py' 2022-08-19T15:28:23,646 adding 'ga4gh.vrs-0.8.6.dev0.dist-info/LICENSE' 2022-08-19T15:28:23,648 adding 'ga4gh.vrs-0.8.6.dev0.dist-info/METADATA' 2022-08-19T15:28:23,650 adding 'ga4gh.vrs-0.8.6.dev0.dist-info/WHEEL' 2022-08-19T15:28:23,651 adding 'ga4gh.vrs-0.8.6.dev0.dist-info/top_level.txt' 2022-08-19T15:28:23,653 adding 'ga4gh.vrs-0.8.6.dev0.dist-info/zip-safe' 2022-08-19T15:28:23,654 adding 'ga4gh.vrs-0.8.6.dev0.dist-info/RECORD' 2022-08-19T15:28:23,658 removing build/bdist.linux-armv7l/wheel 2022-08-19T15:28:23,948 Building wheel for ga4gh-vrs (setup.py): finished with status 'done' 2022-08-19T15:28:23,956 Created wheel for ga4gh-vrs: filename=ga4gh.vrs-0.8.6.dev0-py2.py3-none-any.whl size=32727 sha256=5a8dc227e9c617e50c0ebaa53517db9b2c26ffae79ee2946f9e7d7ff7c59c2ca 2022-08-19T15:28:23,958 Stored in directory: /tmp/pip-ephem-wheel-cache-5ikq6kap/wheels/f1/57/6b/f8f7f6fe07b77f45973bc1e06a262cbfa9bbb73da2ff8cd00b 2022-08-19T15:28:23,985 Successfully built ga4gh-vrs 2022-08-19T15:28:23,994 Removed build tracker: '/tmp/pip-build-tracker-5i8w8ifn'