2022-08-22T12:36:06,694 Created temporary directory: /tmp/pip-ephem-wheel-cache-0lal_pxm 2022-08-22T12:36:06,699 Created temporary directory: /tmp/pip-build-tracker-z02hg_4r 2022-08-22T12:36:06,700 Initialized build tracking at /tmp/pip-build-tracker-z02hg_4r 2022-08-22T12:36:06,700 Created build tracker: /tmp/pip-build-tracker-z02hg_4r 2022-08-22T12:36:06,701 Entered build tracker: /tmp/pip-build-tracker-z02hg_4r 2022-08-22T12:36:06,702 Created temporary directory: /tmp/pip-wheel-whsjncmp 2022-08-22T12:36:06,765 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-22T12:36:06,773 2 location(s) to search for versions of diameter-synthesis: 2022-08-22T12:36:06,773 * https://pypi.org/simple/diameter-synthesis/ 2022-08-22T12:36:06,773 * https://www.piwheels.org/simple/diameter-synthesis/ 2022-08-22T12:36:06,775 Fetching project page and analyzing links: https://pypi.org/simple/diameter-synthesis/ 2022-08-22T12:36:06,776 Getting page https://pypi.org/simple/diameter-synthesis/ 2022-08-22T12:36:06,779 Found index url https://pypi.org/simple 2022-08-22T12:36:06,899 Found link https://files.pythonhosted.org/packages/1e/ca/633740d71f99bc5201b72feac0b855b5cb7a97a54dea59558b26a17fe737/diameter-synthesis-0.3.0.tar.gz#sha256=ec420b7b3d7e615acbd2c2e4e3c791bb29ce7f275226966f67982857a3ad9fa9 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.3.0 2022-08-22T12:36:06,900 Skipping link: No binaries permitted for diameter-synthesis: https://files.pythonhosted.org/packages/ec/fe/a4356c9c4e3a40cceb6885a5eb7e12143101655ae373837c7df32d533280/diameter_synthesis-0.3.0-py3-none-any.whl#sha256=4e8776b6de342358a52bfadd03090e4acc35875c02cb7fa53a17f25fb6fbad39 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:06,902 Found link https://files.pythonhosted.org/packages/96/23/20ca141ab8d35e3a9e0e881b378d55e7eab31a64183e0c90f577f1ea6fba/diameter-synthesis-0.3.1.tar.gz#sha256=ad508eda8205ba63f275406ff42b9e072bf095be6fd19ec4be9599f61dded9b7 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.3.1 2022-08-22T12:36:06,903 Found link https://files.pythonhosted.org/packages/3e/93/75c2a60e7e48d1f8f537010e9b6dc8847787d1341bab798b01027fcb9fff/diameter-synthesis-0.3.2.tar.gz#sha256=ac07e45f6a1927f449bb06fd11e160bb68e4f72163f85c0a18c74af8c4510ba1 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.3.2 2022-08-22T12:36:06,905 Found link https://files.pythonhosted.org/packages/03/43/d8797c35f44c81960f4c1e8a7ac6c6e7045d77898eee401df8dc9aeb9aad/diameter-synthesis-0.3.3.tar.gz#sha256=ddc79bbb5d79269b3321322107689eb272a134150015951938be80ea709004af (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.3.3 2022-08-22T12:36:06,906 Found link https://files.pythonhosted.org/packages/3d/ed/241ae093baaff2b5fe4f617e5ff6a611588f9e2019b95cc387cc4ceb41a5/diameter-synthesis-0.4.1.tar.gz#sha256=be4a6a68a1c346a9851915da9e16e2f71bc743b8fc514343a4be84fefb8d0f48 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.4.1 2022-08-22T12:36:06,907 Found link https://files.pythonhosted.org/packages/81/50/8cc4f018d110a2a8089cfe89ce3f5f329321925d16c592a8cbbbe39cdd83/diameter-synthesis-0.4.2.tar.gz#sha256=ba501ad1f3c6a747bfbd59883b8db6d5f942fa1aec51d463424988ebfc0e2435 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.4.2 2022-08-22T12:36:06,909 Found link https://files.pythonhosted.org/packages/bf/78/cc30046cb87ac05bddb23b57a4baf7b03a10908d0524d3b7ba7ac9de3191/diameter-synthesis-0.5.0.tar.gz#sha256=b743e423ec58b762c9406348002112ece570b65387cc01e7575318fb857a9b91 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.5.0 2022-08-22T12:36:06,909 Skipping link: No binaries permitted for diameter-synthesis: https://files.pythonhosted.org/packages/7a/58/31971f806df93285080b53231f85774e88c1327b1c8651a3f6e33b0afa3f/diameter_synthesis-0.5.0-py3-none-any.whl#sha256=c1cd17d0ab45db9a95ef1e13cca438c5f4abe784223cac79053d096e8fca2968 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:06,911 Found link https://files.pythonhosted.org/packages/4d/4f/df11e298ea2f86b7f345e2f79952996a14632760be1b9fcd83c24a7e8289/diameter-synthesis-0.5.1.tar.gz#sha256=dccf0ffd07a5aca8cf55b26a299932df54c015ead76e9e89970190f1775d1618 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8), version: 0.5.1 2022-08-22T12:36:06,911 Skipping link: No binaries permitted for diameter-synthesis: https://files.pythonhosted.org/packages/8c/aa/6e61cb9ad15a7bf0fb3a9aaf9b4868774a89e74b052a2be7ba4ae81ec836/diameter_synthesis-0.5.1-py3-none-any.whl#sha256=c42a03a708f88c4216d3a4b6bb273ac7b440efcb2cd428684cc2e56b51503983 (from https://pypi.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:06,912 Fetching project page and analyzing links: https://www.piwheels.org/simple/diameter-synthesis/ 2022-08-22T12:36:06,913 Getting page https://www.piwheels.org/simple/diameter-synthesis/ 2022-08-22T12:36:06,915 Found index url https://www.piwheels.org/simple 2022-08-22T12:36:07,141 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.5.0-py3-none-any.whl#sha256=a4c98e630df7a9d1d279244be706404e5bcac6dae3fb2889a21eb7df0487eda0 (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,142 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.4.2-py3-none-any.whl#sha256=fca22ad7cb0a707fedead86f8b06b735aaacb353fcec483ed3cbf91f91bf5b3c (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,142 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.4.1-py3-none-any.whl#sha256=2e42434cbf932a6145e5bc8e8d332fa50ab46e5d4f7685407b39310c4a100348 (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,143 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.3.3-py3-none-any.whl#sha256=761353f4b74f83e1dc297fdf2768c938d27539698216a4dbf02648eb0e34f5ed (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,143 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.3.2-py3-none-any.whl#sha256=d5adae5c034827f9e2fe773f0958e4afa60105bedb21adb2bd52fd21d053f799 (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,144 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.3.1-py3-none-any.whl#sha256=721ad6db80b0b592894f89a506066b05969fb8e30c7781bdb227dc920390e4bd (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,144 Skipping link: No binaries permitted for diameter-synthesis: https://www.piwheels.org/simple/diameter-synthesis/diameter_synthesis-0.3.0-py3-none-any.whl#sha256=0c19f03cab74dc8633adb744eef5f9920002032cfc23e951786fae45e2264d5a (from https://www.piwheels.org/simple/diameter-synthesis/) (requires-python:>=3.8) 2022-08-22T12:36:07,145 Skipping link: not a file: https://www.piwheels.org/simple/diameter-synthesis/ 2022-08-22T12:36:07,145 Skipping link: not a file: https://pypi.org/simple/diameter-synthesis/ 2022-08-22T12:36:07,192 Given no hashes to check 1 links for project 'diameter-synthesis': discarding no candidates 2022-08-22T12:36:07,234 Collecting diameter-synthesis==0.5.1 2022-08-22T12:36:07,238 Created temporary directory: /tmp/pip-unpack-bp599tah 2022-08-22T12:36:07,775 Downloading diameter-synthesis-0.5.1.tar.gz (422 kB) 2022-08-22T12:36:08,417 Added diameter-synthesis==0.5.1 from https://files.pythonhosted.org/packages/4d/4f/df11e298ea2f86b7f345e2f79952996a14632760be1b9fcd83c24a7e8289/diameter-synthesis-0.5.1.tar.gz#sha256=dccf0ffd07a5aca8cf55b26a299932df54c015ead76e9e89970190f1775d1618 to build tracker '/tmp/pip-build-tracker-z02hg_4r' 2022-08-22T12:36:08,429 Created temporary directory: /tmp/pip-build-env-g9mcrxi6 2022-08-22T12:36:08,450 Created temporary directory: /tmp/pip-standalone-pip-lwo9jbcx 2022-08-22T12:36:10,717 Installing build dependencies: started 2022-08-22T12:36:10,719 Running command pip subprocess to install build dependencies 2022-08-22T12:36:23,670 Using pip 22.1.2 from /tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip (python 3.9) 2022-08-22T12:36:26,089 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-22T12:36:30,169 Collecting setuptools>=42 2022-08-22T12:36:30,463 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.2.0-py3-none-any.whl (1.2 MB) 2022-08-22T12:36:31,128 Collecting wheel 2022-08-22T12:36:31,168 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-08-22T12:36:42,015 Installing collected packages: wheel, setuptools 2022-08-22T12:36:42,313 Creating /tmp/pip-build-env-g9mcrxi6/overlay/bin 2022-08-22T12:36:42,318 changing mode of /tmp/pip-build-env-g9mcrxi6/overlay/bin/wheel to 755 2022-08-22T12:36:47,724 Successfully installed setuptools-65.2.0 wheel-0.37.1 2022-08-22T12:36:47,932 --- Logging error --- 2022-08-22T12:36:47,948 Traceback (most recent call last): 2022-08-22T12:36:47,949 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-08-22T12:36:47,949 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-08-22T12:36:47,949 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-08-22T12:36:47,950 extend(render(renderable, render_options)) 2022-08-22T12:36:47,950 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-08-22T12:36:47,951 for render_output in iter_render: 2022-08-22T12:36:47,951 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-08-22T12:36:47,951 for line in lines: 2022-08-22T12:36:47,951 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-08-22T12:36:47,952 for segment in segments: 2022-08-22T12:36:47,952 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-08-22T12:36:47,952 renderable = rich_cast(renderable) 2022-08-22T12:36:47,953 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-08-22T12:36:47,953 renderable = cast_method() 2022-08-22T12:36:47,953 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-08-22T12:36:47,954 pip_cmd = get_best_invocation_for_this_pip() 2022-08-22T12:36:47,954 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 58, in get_best_invocation_for_this_pip 2022-08-22T12:36:47,954 if found_executable and os.path.samefile( 2022-08-22T12:36:47,955 File "/usr/lib/python3.9/genericpath.py", line 101, in samefile 2022-08-22T12:36:47,955 s2 = os.stat(f2) 2022-08-22T12:36:47,956 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.9' 2022-08-22T12:36:47,956 Call stack: 2022-08-22T12:36:47,959 File "/usr/lib/python3.9/runpy.py", line 197, in _run_module_as_main 2022-08-22T12:36:47,959 return _run_code(code, main_globals, None, 2022-08-22T12:36:47,960 File "/usr/lib/python3.9/runpy.py", line 87, in _run_code 2022-08-22T12:36:47,960 exec(code, run_globals) 2022-08-22T12:36:47,960 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/__main__.py", line 31, in 2022-08-22T12:36:47,961 sys.exit(_main()) 2022-08-22T12:36:47,961 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-08-22T12:36:47,961 return command.main(cmd_args) 2022-08-22T12:36:47,962 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-08-22T12:36:47,962 return self._main(args) 2022-08-22T12:36:47,962 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-08-22T12:36:47,963 self.handle_pip_version_check(options) 2022-08-22T12:36:47,963 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-08-22T12:36:47,963 pip_self_version_check(session, options) 2022-08-22T12:36:47,964 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-08-22T12:36:47,964 logger.info("[present-rich] %s", upgrade_prompt) 2022-08-22T12:36:47,964 File "/usr/lib/python3.9/logging/__init__.py", line 1442, in info 2022-08-22T12:36:47,964 self._log(INFO, msg, args, **kwargs) 2022-08-22T12:36:47,965 File "/usr/lib/python3.9/logging/__init__.py", line 1585, in _log 2022-08-22T12:36:47,965 self.handle(record) 2022-08-22T12:36:47,965 File "/usr/lib/python3.9/logging/__init__.py", line 1595, in handle 2022-08-22T12:36:47,966 self.callHandlers(record) 2022-08-22T12:36:47,966 File "/usr/lib/python3.9/logging/__init__.py", line 1657, in callHandlers 2022-08-22T12:36:47,966 hdlr.handle(record) 2022-08-22T12:36:47,966 File "/usr/lib/python3.9/logging/__init__.py", line 948, in handle 2022-08-22T12:36:47,967 self.emit(record) 2022-08-22T12:36:47,967 File "/tmp/pip-standalone-pip-lwo9jbcx/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-08-22T12:36:47,967 self.handleError(record) 2022-08-22T12:36:47,967 Message: '[present-rich] %s' 2022-08-22T12:36:47,968 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-08-22T12:36:48,509 Installing build dependencies: finished with status 'done' 2022-08-22T12:36:48,537 Getting requirements to build wheel: started 2022-08-22T12:36:48,539 Running command Getting requirements to build wheel 2022-08-22T12:36:50,564 Getting requirements to build wheel: finished with status 'done' 2022-08-22T12:36:50,600 Created temporary directory: /tmp/pip-standalone-pip-ttq9xh84 2022-08-22T12:36:52,795 Installing backend dependencies: started 2022-08-22T12:36:52,797 Running command pip subprocess to install backend dependencies 2022-08-22T12:37:04,992 Using pip 22.1.2 from /tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip (python 3.9) 2022-08-22T12:37:07,030 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-22T12:37:08,264 Collecting setuptools_scm 2022-08-22T12:37:08,321 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-08-22T12:37:12,332 Collecting setuptools 2022-08-22T12:37:12,621 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.2.0-py3-none-any.whl (1.2 MB) 2022-08-22T12:37:13,037 Collecting tomli>=1.0.0 2022-08-22T12:37:13,082 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-08-22T12:37:13,496 Collecting packaging>=20.0 2022-08-22T12:37:13,530 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-08-22T12:37:13,775 Collecting typing-extensions 2022-08-22T12:37:13,808 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.3.0-py3-none-any.whl (25 kB) 2022-08-22T12:37:14,519 Collecting pyparsing!=3.0.5,>=2.0.2 2022-08-22T12:37:14,560 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-08-22T12:37:25,562 Installing collected packages: typing-extensions, tomli, setuptools, pyparsing, packaging, setuptools_scm 2022-08-22T12:37:33,010 Successfully installed packaging-21.3 pyparsing-3.0.9 setuptools-65.2.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.3.0 2022-08-22T12:37:33,216 --- Logging error --- 2022-08-22T12:37:33,233 Traceback (most recent call last): 2022-08-22T12:37:33,234 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-08-22T12:37:33,234 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-08-22T12:37:33,234 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-08-22T12:37:33,235 extend(render(renderable, render_options)) 2022-08-22T12:37:33,235 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-08-22T12:37:33,235 for render_output in iter_render: 2022-08-22T12:37:33,236 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-08-22T12:37:33,236 for line in lines: 2022-08-22T12:37:33,236 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-08-22T12:37:33,236 for segment in segments: 2022-08-22T12:37:33,237 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-08-22T12:37:33,237 renderable = rich_cast(renderable) 2022-08-22T12:37:33,237 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-08-22T12:37:33,238 renderable = cast_method() 2022-08-22T12:37:33,238 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-08-22T12:37:33,238 pip_cmd = get_best_invocation_for_this_pip() 2022-08-22T12:37:33,239 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 58, in get_best_invocation_for_this_pip 2022-08-22T12:37:33,239 if found_executable and os.path.samefile( 2022-08-22T12:37:33,239 File "/usr/lib/python3.9/genericpath.py", line 101, in samefile 2022-08-22T12:37:33,240 s2 = os.stat(f2) 2022-08-22T12:37:33,240 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.9' 2022-08-22T12:37:33,240 Call stack: 2022-08-22T12:37:33,244 File "/usr/lib/python3.9/runpy.py", line 197, in _run_module_as_main 2022-08-22T12:37:33,245 return _run_code(code, main_globals, None, 2022-08-22T12:37:33,245 File "/usr/lib/python3.9/runpy.py", line 87, in _run_code 2022-08-22T12:37:33,245 exec(code, run_globals) 2022-08-22T12:37:33,246 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/__main__.py", line 31, in 2022-08-22T12:37:33,246 sys.exit(_main()) 2022-08-22T12:37:33,246 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-08-22T12:37:33,246 return command.main(cmd_args) 2022-08-22T12:37:33,247 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-08-22T12:37:33,247 return self._main(args) 2022-08-22T12:37:33,247 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-08-22T12:37:33,248 self.handle_pip_version_check(options) 2022-08-22T12:37:33,248 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-08-22T12:37:33,248 pip_self_version_check(session, options) 2022-08-22T12:37:33,249 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-08-22T12:37:33,249 logger.info("[present-rich] %s", upgrade_prompt) 2022-08-22T12:37:33,249 File "/usr/lib/python3.9/logging/__init__.py", line 1442, in info 2022-08-22T12:37:33,250 self._log(INFO, msg, args, **kwargs) 2022-08-22T12:37:33,250 File "/usr/lib/python3.9/logging/__init__.py", line 1585, in _log 2022-08-22T12:37:33,250 self.handle(record) 2022-08-22T12:37:33,250 File "/usr/lib/python3.9/logging/__init__.py", line 1595, in handle 2022-08-22T12:37:33,251 self.callHandlers(record) 2022-08-22T12:37:33,251 File "/usr/lib/python3.9/logging/__init__.py", line 1657, in callHandlers 2022-08-22T12:37:33,251 hdlr.handle(record) 2022-08-22T12:37:33,252 File "/usr/lib/python3.9/logging/__init__.py", line 948, in handle 2022-08-22T12:37:33,252 self.emit(record) 2022-08-22T12:37:33,252 File "/tmp/pip-standalone-pip-ttq9xh84/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-08-22T12:37:33,252 self.handleError(record) 2022-08-22T12:37:33,253 Message: '[present-rich] %s' 2022-08-22T12:37:33,253 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-08-22T12:37:33,845 Installing backend dependencies: finished with status 'done' 2022-08-22T12:37:33,868 Created temporary directory: /tmp/pip-modern-metadata-a5qytbk2 2022-08-22T12:37:33,874 Preparing metadata (pyproject.toml): started 2022-08-22T12:37:33,876 Running command Preparing metadata (pyproject.toml) 2022-08-22T12:37:43,191 running dist_info 2022-08-22T12:37:43,825 creating /tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info 2022-08-22T12:37:44,420 writing /tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/PKG-INFO 2022-08-22T12:37:44,990 writing dependency_links to /tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/dependency_links.txt 2022-08-22T12:37:46,678 writing entry points to /tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/entry_points.txt 2022-08-22T12:37:47,806 writing requirements to /tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/requires.txt 2022-08-22T12:37:48,372 writing top-level names to /tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/top_level.txt 2022-08-22T12:37:48,375 writing manifest file '/tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/SOURCES.txt' 2022-08-22T12:37:49,186 listing git files failed - pretending there aren't any 2022-08-22T12:37:49,206 reading manifest file '/tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/SOURCES.txt' 2022-08-22T12:37:49,210 reading manifest template 'MANIFEST.in' 2022-08-22T12:37:49,215 adding license file 'LICENSE.txt' 2022-08-22T12:37:49,215 adding license file 'AUTHORS.md' 2022-08-22T12:37:49,222 writing manifest file '/tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis.egg-info/SOURCES.txt' 2022-08-22T12:37:49,225 creating '/tmp/pip-modern-metadata-a5qytbk2/diameter_synthesis-0.5.1.dist-info' 2022-08-22T12:37:49,526 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2022-08-22T12:37:49,529 adding license file "AUTHORS.md" (matched pattern "AUTHORS*") 2022-08-22T12:37:49,775 Preparing metadata (pyproject.toml): finished with status 'done' 2022-08-22T12:37:49,791 Source in /tmp/pip-wheel-whsjncmp/diameter-synthesis_d3edba6d71be4f86835e4bda6f84601c has version 0.5.1, which satisfies requirement diameter-synthesis==0.5.1 from https://files.pythonhosted.org/packages/4d/4f/df11e298ea2f86b7f345e2f79952996a14632760be1b9fcd83c24a7e8289/diameter-synthesis-0.5.1.tar.gz#sha256=dccf0ffd07a5aca8cf55b26a299932df54c015ead76e9e89970190f1775d1618 2022-08-22T12:37:49,793 Removed diameter-synthesis==0.5.1 from https://files.pythonhosted.org/packages/4d/4f/df11e298ea2f86b7f345e2f79952996a14632760be1b9fcd83c24a7e8289/diameter-synthesis-0.5.1.tar.gz#sha256=dccf0ffd07a5aca8cf55b26a299932df54c015ead76e9e89970190f1775d1618 from build tracker '/tmp/pip-build-tracker-z02hg_4r' 2022-08-22T12:37:49,807 Created temporary directory: /tmp/pip-unpack-9t0669d2 2022-08-22T12:37:49,809 Building wheels for collected packages: diameter-synthesis 2022-08-22T12:37:49,818 Created temporary directory: /tmp/pip-wheel-gt1io9ep 2022-08-22T12:37:49,819 Destination directory: /tmp/pip-wheel-gt1io9ep 2022-08-22T12:37:49,824 Building wheel for diameter-synthesis (pyproject.toml): started 2022-08-22T12:37:49,826 Running command Building wheel for diameter-synthesis (pyproject.toml) 2022-08-22T12:37:58,951 running bdist_wheel 2022-08-22T12:38:00,152 running build 2022-08-22T12:38:00,153 running build_py 2022-08-22T12:38:00,811 creating build 2022-08-22T12:38:00,811 creating build/lib 2022-08-22T12:38:00,813 creating build/lib/diameter_synthesis 2022-08-22T12:38:00,815 copying diameter_synthesis/simpler_diametrizer.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,819 copying diameter_synthesis/morph_functions.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,823 copying diameter_synthesis/main.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,828 copying diameter_synthesis/validators.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,831 copying diameter_synthesis/build_models.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,835 copying diameter_synthesis/exception.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,838 copying diameter_synthesis/plotting.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,843 copying diameter_synthesis/build_diameters.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,848 copying diameter_synthesis/__init__.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,851 copying diameter_synthesis/distribution_fitting.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,855 copying diameter_synthesis/cli.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,859 copying diameter_synthesis/utils.py -> build/lib/diameter_synthesis 2022-08-22T12:38:00,865 creating build/lib/tests 2022-08-22T12:38:00,867 copying tests/testing_tools.py -> build/lib/tests 2022-08-22T12:38:00,871 copying tests/test_build_diameters.py -> build/lib/tests 2022-08-22T12:38:00,875 copying tests/test_simpler_diametrizer.py -> build/lib/tests 2022-08-22T12:38:00,878 copying tests/test_main_and_cli.py -> build/lib/tests 2022-08-22T12:38:00,882 copying tests/test_build_models.py -> build/lib/tests 2022-08-22T12:38:00,886 copying tests/test_morph_functions.py -> build/lib/tests 2022-08-22T12:38:00,890 copying tests/__init__.py -> build/lib/tests 2022-08-22T12:38:00,893 copying tests/test_distribution_fitting.py -> build/lib/tests 2022-08-22T12:38:00,898 copying tests/conftest.py -> build/lib/tests 2022-08-22T12:38:00,902 copying tests/test_validator.py -> build/lib/tests 2022-08-22T12:38:00,905 copying tests/test_plotting.py -> build/lib/tests 2022-08-22T12:38:00,909 running egg_info 2022-08-22T12:38:02,128 writing diameter_synthesis.egg-info/PKG-INFO 2022-08-22T12:38:02,695 writing dependency_links to diameter_synthesis.egg-info/dependency_links.txt 2022-08-22T12:38:04,385 writing entry points to diameter_synthesis.egg-info/entry_points.txt 2022-08-22T12:38:05,515 writing requirements to diameter_synthesis.egg-info/requires.txt 2022-08-22T12:38:06,080 writing top-level names to diameter_synthesis.egg-info/top_level.txt 2022-08-22T12:38:06,207 listing git files failed - pretending there aren't any 2022-08-22T12:38:06,227 reading manifest file 'diameter_synthesis.egg-info/SOURCES.txt' 2022-08-22T12:38:06,252 reading manifest template 'MANIFEST.in' 2022-08-22T12:38:06,256 adding license file 'LICENSE.txt' 2022-08-22T12:38:06,257 adding license file 'AUTHORS.md' 2022-08-22T12:38:06,269 writing manifest file 'diameter_synthesis.egg-info/SOURCES.txt' 2022-08-22T12:38:06,275 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,276 ############################ 2022-08-22T12:38:06,277 # Package would be ignored # 2022-08-22T12:38:06,277 ############################ 2022-08-22T12:38:06,277 Python recognizes 'diameter_synthesis.schemas' as an importable package, however it is 2022-08-22T12:38:06,278 included in the distribution as "data". 2022-08-22T12:38:06,278 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,278 therefore is considered deprecated). 2022-08-22T12:38:06,279 Please make sure that 'diameter_synthesis.schemas' is included as a package by using 2022-08-22T12:38:06,279 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,280 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,280 documentation page. 2022-08-22T12:38:06,281 !! 2022-08-22T12:38:06,282 check.warn(importable) 2022-08-22T12:38:06,282 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,283 ############################ 2022-08-22T12:38:06,283 # Package would be ignored # 2022-08-22T12:38:06,283 ############################ 2022-08-22T12:38:06,284 Python recognizes 'tests.data' as an importable package, however it is 2022-08-22T12:38:06,284 included in the distribution as "data". 2022-08-22T12:38:06,284 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,285 therefore is considered deprecated). 2022-08-22T12:38:06,285 Please make sure that 'tests.data' is included as a package by using 2022-08-22T12:38:06,285 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,286 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,286 documentation page. 2022-08-22T12:38:06,287 !! 2022-08-22T12:38:06,288 check.warn(importable) 2022-08-22T12:38:06,288 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,289 ############################ 2022-08-22T12:38:06,289 # Package would be ignored # 2022-08-22T12:38:06,289 ############################ 2022-08-22T12:38:06,290 Python recognizes 'tests.expected_images' as an importable package, however it is 2022-08-22T12:38:06,290 included in the distribution as "data". 2022-08-22T12:38:06,290 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,291 therefore is considered deprecated). 2022-08-22T12:38:06,291 Please make sure that 'tests.expected_images' is included as a package by using 2022-08-22T12:38:06,291 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,292 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,292 documentation page. 2022-08-22T12:38:06,293 !! 2022-08-22T12:38:06,294 check.warn(importable) 2022-08-22T12:38:06,294 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,295 ############################ 2022-08-22T12:38:06,295 # Package would be ignored # 2022-08-22T12:38:06,296 ############################ 2022-08-22T12:38:06,296 Python recognizes 'tests.expected_images.test_cumulative_analysis.analysis' as an importable package, however it is 2022-08-22T12:38:06,296 included in the distribution as "data". 2022-08-22T12:38:06,297 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,297 therefore is considered deprecated). 2022-08-22T12:38:06,298 Please make sure that 'tests.expected_images.test_cumulative_analysis.analysis' is included as a package by using 2022-08-22T12:38:06,298 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,299 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,299 documentation page. 2022-08-22T12:38:06,300 !! 2022-08-22T12:38:06,301 check.warn(importable) 2022-08-22T12:38:06,301 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,302 ############################ 2022-08-22T12:38:06,302 # Package would be ignored # 2022-08-22T12:38:06,303 ############################ 2022-08-22T12:38:06,303 Python recognizes 'tests.expected_images.test_cumulative_analysis.analysis.L5_TPC_A_cumulative_section_path_distances_areas_individual' as an importable package, however it is 2022-08-22T12:38:06,303 included in the distribution as "data". 2022-08-22T12:38:06,304 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,304 therefore is considered deprecated). 2022-08-22T12:38:06,305 Please make sure that 'tests.expected_images.test_cumulative_analysis.analysis.L5_TPC_A_cumulative_section_path_distances_areas_individual' is included as a package by using 2022-08-22T12:38:06,305 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,306 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,306 documentation page. 2022-08-22T12:38:06,307 !! 2022-08-22T12:38:06,307 check.warn(importable) 2022-08-22T12:38:06,308 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,309 ############################ 2022-08-22T12:38:06,309 # Package would be ignored # 2022-08-22T12:38:06,309 ############################ 2022-08-22T12:38:06,310 Python recognizes 'tests.expected_images.test_cumulative_analysis.analysis.L5_TPC_A_cumulative_section_path_distances_volumes_individual' as an importable package, however it is 2022-08-22T12:38:06,310 included in the distribution as "data". 2022-08-22T12:38:06,310 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,311 therefore is considered deprecated). 2022-08-22T12:38:06,311 Please make sure that 'tests.expected_images.test_cumulative_analysis.analysis.L5_TPC_A_cumulative_section_path_distances_volumes_individual' is included as a package by using 2022-08-22T12:38:06,312 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,312 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,313 documentation page. 2022-08-22T12:38:06,313 !! 2022-08-22T12:38:06,314 check.warn(importable) 2022-08-22T12:38:06,314 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,315 ############################ 2022-08-22T12:38:06,316 # Package would be ignored # 2022-08-22T12:38:06,316 ############################ 2022-08-22T12:38:06,316 Python recognizes 'tests.expected_images.test_make_cumulative_figures' as an importable package, however it is 2022-08-22T12:38:06,316 included in the distribution as "data". 2022-08-22T12:38:06,317 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,317 therefore is considered deprecated). 2022-08-22T12:38:06,318 Please make sure that 'tests.expected_images.test_make_cumulative_figures' is included as a package by using 2022-08-22T12:38:06,318 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,319 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,319 documentation page. 2022-08-22T12:38:06,320 !! 2022-08-22T12:38:06,321 check.warn(importable) 2022-08-22T12:38:06,321 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-22T12:38:06,322 ############################ 2022-08-22T12:38:06,322 # Package would be ignored # 2022-08-22T12:38:06,322 ############################ 2022-08-22T12:38:06,323 Python recognizes 'tests.expected_images.test_make_cumulative_figures.cumulative_segment_radial_distances_volumes_individual' as an importable package, however it is 2022-08-22T12:38:06,323 included in the distribution as "data". 2022-08-22T12:38:06,323 This behavior is likely to change in future versions of setuptools (and 2022-08-22T12:38:06,324 therefore is considered deprecated). 2022-08-22T12:38:06,324 Please make sure that 'tests.expected_images.test_make_cumulative_figures.cumulative_segment_radial_distances_volumes_individual' is included as a package by using 2022-08-22T12:38:06,325 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-22T12:38:06,325 You can read more about "package discovery" and "data files" on setuptools 2022-08-22T12:38:06,325 documentation page. 2022-08-22T12:38:06,326 !! 2022-08-22T12:38:06,327 check.warn(importable) 2022-08-22T12:38:06,327 creating build/lib/diameter_synthesis/schemas 2022-08-22T12:38:06,328 copying diameter_synthesis/schemas/config.json -> build/lib/diameter_synthesis/schemas 2022-08-22T12:38:06,328 copying diameter_synthesis/schemas/model_params.json -> build/lib/diameter_synthesis/schemas 2022-08-22T12:38:06,328 creating build/lib/tests/data 2022-08-22T12:38:06,329 copying tests/data/C030796A-P3.h5 -> build/lib/tests/data 2022-08-22T12:38:06,329 copying tests/data/C030796A-P3_diametrized.h5 -> build/lib/tests/data 2022-08-22T12:38:06,329 copying tests/data/C030796A-P3_lite.h5 -> build/lib/tests/data 2022-08-22T12:38:06,334 copying tests/data/C030796A-P3_lite_diametrized.h5 -> build/lib/tests/data 2022-08-22T12:38:06,340 copying tests/data/C030796A-P3_lite_diametrized_1_sample.h5 -> build/lib/tests/data 2022-08-22T12:38:06,346 copying tests/data/C030796A-P3_lite_diametrized_astrocyte.h5 -> build/lib/tests/data 2022-08-22T12:38:06,352 copying tests/data/astro_model_data.json -> build/lib/tests/data 2022-08-22T12:38:06,356 copying tests/data/astro_model_params.json -> build/lib/tests/data 2022-08-22T12:38:06,360 copying tests/data/config.json -> build/lib/tests/data 2022-08-22T12:38:06,363 copying tests/data/model_data.json -> build/lib/tests/data 2022-08-22T12:38:06,367 copying tests/data/model_params.json -> build/lib/tests/data 2022-08-22T12:38:06,371 copying tests/data/neurondb.dat -> build/lib/tests/data 2022-08-22T12:38:06,375 copying tests/data/simpler_config.json -> build/lib/tests/data 2022-08-22T12:38:06,379 copying tests/data/simpler_model_data.json -> build/lib/tests/data 2022-08-22T12:38:06,383 copying tests/data/simpler_model_params.json -> build/lib/tests/data 2022-08-22T12:38:06,386 copying tests/data/simpler_morph_diametrized.asc -> build/lib/tests/data 2022-08-22T12:38:06,390 copying tests/data/small_morph_apical_diametrized.asc -> build/lib/tests/data 2022-08-22T12:38:06,394 copying tests/data/small_morph_diametrized.asc -> build/lib/tests/data 2022-08-22T12:38:06,398 copying tests/data/small_morph_several_apical_diametrized.asc -> build/lib/tests/data 2022-08-22T12:38:06,403 creating build/lib/tests/expected_images 2022-08-22T12:38:06,404 copying tests/expected_images/test_plot_cumulative_distribution.pdf -> build/lib/tests/expected_images 2022-08-22T12:38:06,410 copying tests/expected_images/test_plot_diameter_diff_div.pdf -> build/lib/tests/expected_images 2022-08-22T12:38:06,417 copying tests/expected_images/test_plot_diameter_diff_mult.pdf -> build/lib/tests/expected_images 2022-08-22T12:38:06,424 copying tests/expected_images/test_plot_distribution_fit.pdf -> build/lib/tests/expected_images 2022-08-22T12:38:06,429 copying tests/expected_images/test_violin_analysis.pdf -> build/lib/tests/expected_images 2022-08-22T12:38:06,435 creating build/lib/tests/expected_images/test_cumulative_analysis 2022-08-22T12:38:06,435 creating build/lib/tests/expected_images/test_cumulative_analysis/analysis 2022-08-22T12:38:06,437 copying tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas.pdf -> build/lib/tests/expected_images/test_cumulative_analysis/analysis 2022-08-22T12:38:06,442 copying tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes.pdf -> build/lib/tests/expected_images/test_cumulative_analysis/analysis 2022-08-22T12:38:06,448 creating build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual 2022-08-22T12:38:06,450 copying tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual/0_L5_TPC_A_cumulative_section_path_distances_areas_C030796A-P3_lite.pdf -> build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual 2022-08-22T12:38:06,455 creating build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual 2022-08-22T12:38:06,456 copying tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual/0_L5_TPC_A_cumulative_section_path_distances_volumes_C030796A-P3_lite.pdf -> build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual 2022-08-22T12:38:06,462 creating build/lib/tests/expected_images/test_make_cumulative_figures 2022-08-22T12:38:06,463 copying tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes.pdf -> build/lib/tests/expected_images/test_make_cumulative_figures 2022-08-22T12:38:06,469 creating build/lib/tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual 2022-08-22T12:38:06,470 copying tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual/0_cumulative_segment_radial_distances_volumes.pdf -> build/lib/tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual 2022-08-22T12:38:07,702 installing to build/bdist.linux-armv7l/wheel 2022-08-22T12:38:07,702 running install 2022-08-22T12:38:07,763 running install_lib 2022-08-22T12:38:08,362 creating build/bdist.linux-armv7l 2022-08-22T12:38:08,363 creating build/bdist.linux-armv7l/wheel 2022-08-22T12:38:08,366 creating build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,368 copying build/lib/diameter_synthesis/simpler_diametrizer.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,374 creating build/bdist.linux-armv7l/wheel/diameter_synthesis/schemas 2022-08-22T12:38:08,375 copying build/lib/diameter_synthesis/schemas/config.json -> build/bdist.linux-armv7l/wheel/diameter_synthesis/schemas 2022-08-22T12:38:08,379 copying build/lib/diameter_synthesis/schemas/model_params.json -> build/bdist.linux-armv7l/wheel/diameter_synthesis/schemas 2022-08-22T12:38:08,383 copying build/lib/diameter_synthesis/morph_functions.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,387 copying build/lib/diameter_synthesis/main.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,391 copying build/lib/diameter_synthesis/validators.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,395 copying build/lib/diameter_synthesis/build_models.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,399 copying build/lib/diameter_synthesis/exception.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,402 copying build/lib/diameter_synthesis/plotting.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,407 copying build/lib/diameter_synthesis/build_diameters.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,413 copying build/lib/diameter_synthesis/__init__.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,416 copying build/lib/diameter_synthesis/distribution_fitting.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,420 copying build/lib/diameter_synthesis/cli.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,424 copying build/lib/diameter_synthesis/utils.py -> build/bdist.linux-armv7l/wheel/diameter_synthesis 2022-08-22T12:38:08,430 creating build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,431 copying build/lib/tests/testing_tools.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,436 creating build/bdist.linux-armv7l/wheel/tests/expected_images 2022-08-22T12:38:08,437 copying build/lib/tests/expected_images/test_plot_distribution_fit.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images 2022-08-22T12:38:08,442 copying build/lib/tests/expected_images/test_plot_diameter_diff_mult.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images 2022-08-22T12:38:08,450 creating build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis 2022-08-22T12:38:08,452 creating build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis 2022-08-22T12:38:08,455 creating build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual 2022-08-22T12:38:08,457 copying build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual/0_L5_TPC_A_cumulative_section_path_distances_volumes_C030796A-P3_lite.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual 2022-08-22T12:38:08,462 copying build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis 2022-08-22T12:38:08,467 copying build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis 2022-08-22T12:38:08,472 creating build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual 2022-08-22T12:38:08,474 copying build/lib/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual/0_L5_TPC_A_cumulative_section_path_distances_areas_C030796A-P3_lite.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual 2022-08-22T12:38:08,479 copying build/lib/tests/expected_images/test_violin_analysis.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images 2022-08-22T12:38:08,484 copying build/lib/tests/expected_images/test_plot_diameter_diff_div.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images 2022-08-22T12:38:08,492 creating build/bdist.linux-armv7l/wheel/tests/expected_images/test_make_cumulative_figures 2022-08-22T12:38:08,495 creating build/bdist.linux-armv7l/wheel/tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual 2022-08-22T12:38:08,497 copying build/lib/tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual/0_cumulative_segment_radial_distances_volumes.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual 2022-08-22T12:38:08,503 copying build/lib/tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images/test_make_cumulative_figures 2022-08-22T12:38:08,509 copying build/lib/tests/expected_images/test_plot_cumulative_distribution.pdf -> build/bdist.linux-armv7l/wheel/tests/expected_images 2022-08-22T12:38:08,515 copying build/lib/tests/test_build_diameters.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,520 copying build/lib/tests/test_simpler_diametrizer.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,524 copying build/lib/tests/test_main_and_cli.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,529 copying build/lib/tests/test_build_models.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,533 copying build/lib/tests/test_morph_functions.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,537 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,541 copying build/lib/tests/test_distribution_fitting.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,546 creating build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,548 copying build/lib/tests/data/config.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,551 copying build/lib/tests/data/C030796A-P3_lite.h5 -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,557 copying build/lib/tests/data/C030796A-P3_lite_diametrized.h5 -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,562 copying build/lib/tests/data/astro_model_params.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,565 copying build/lib/tests/data/C030796A-P3.h5 -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,574 copying build/lib/tests/data/model_params.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,578 copying build/lib/tests/data/simpler_model_data.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,583 copying build/lib/tests/data/model_data.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,586 copying build/lib/tests/data/simpler_morph_diametrized.asc -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,589 copying build/lib/tests/data/small_morph_diametrized.asc -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,593 copying build/lib/tests/data/small_morph_apical_diametrized.asc -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,596 copying build/lib/tests/data/astro_model_data.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,599 copying build/lib/tests/data/C030796A-P3_lite_diametrized_astrocyte.h5 -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,604 copying build/lib/tests/data/small_morph_several_apical_diametrized.asc -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,608 copying build/lib/tests/data/C030796A-P3_lite_diametrized_1_sample.h5 -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,614 copying build/lib/tests/data/simpler_model_params.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,617 copying build/lib/tests/data/C030796A-P3_diametrized.h5 -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,626 copying build/lib/tests/data/neurondb.dat -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,630 copying build/lib/tests/data/simpler_config.json -> build/bdist.linux-armv7l/wheel/tests/data 2022-08-22T12:38:08,634 copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,639 copying build/lib/tests/test_validator.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,643 copying build/lib/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/tests 2022-08-22T12:38:08,647 running install_egg_info 2022-08-22T12:38:09,248 Copying diameter_synthesis.egg-info to build/bdist.linux-armv7l/wheel/diameter_synthesis-0.5.1-py3.9.egg-info 2022-08-22T12:38:09,272 running install_scripts 2022-08-22T12:38:09,510 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2022-08-22T12:38:09,512 adding license file "AUTHORS.md" (matched pattern "AUTHORS*") 2022-08-22T12:38:09,524 creating build/bdist.linux-armv7l/wheel/diameter_synthesis-0.5.1.dist-info/WHEEL 2022-08-22T12:38:09,529 creating '/tmp/pip-wheel-gt1io9ep/tmpwr0_a6q4/diameter_synthesis-0.5.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-22T12:38:09,534 adding 'diameter_synthesis/__init__.py' 2022-08-22T12:38:09,540 adding 'diameter_synthesis/build_diameters.py' 2022-08-22T12:38:09,544 adding 'diameter_synthesis/build_models.py' 2022-08-22T12:38:09,547 adding 'diameter_synthesis/cli.py' 2022-08-22T12:38:09,550 adding 'diameter_synthesis/distribution_fitting.py' 2022-08-22T12:38:09,552 adding 'diameter_synthesis/exception.py' 2022-08-22T12:38:09,556 adding 'diameter_synthesis/main.py' 2022-08-22T12:38:09,560 adding 'diameter_synthesis/morph_functions.py' 2022-08-22T12:38:09,566 adding 'diameter_synthesis/plotting.py' 2022-08-22T12:38:09,570 adding 'diameter_synthesis/simpler_diametrizer.py' 2022-08-22T12:38:09,573 adding 'diameter_synthesis/utils.py' 2022-08-22T12:38:09,576 adding 'diameter_synthesis/validators.py' 2022-08-22T12:38:09,579 adding 'diameter_synthesis/schemas/config.json' 2022-08-22T12:38:09,582 adding 'diameter_synthesis/schemas/model_params.json' 2022-08-22T12:38:09,588 adding 'tests/__init__.py' 2022-08-22T12:38:09,592 adding 'tests/conftest.py' 2022-08-22T12:38:09,595 adding 'tests/test_build_diameters.py' 2022-08-22T12:38:09,598 adding 'tests/test_build_models.py' 2022-08-22T12:38:09,602 adding 'tests/test_distribution_fitting.py' 2022-08-22T12:38:09,605 adding 'tests/test_main_and_cli.py' 2022-08-22T12:38:09,608 adding 'tests/test_morph_functions.py' 2022-08-22T12:38:09,611 adding 'tests/test_plotting.py' 2022-08-22T12:38:09,614 adding 'tests/test_simpler_diametrizer.py' 2022-08-22T12:38:09,616 adding 'tests/test_validator.py' 2022-08-22T12:38:09,619 adding 'tests/testing_tools.py' 2022-08-22T12:38:09,657 adding 'tests/data/C030796A-P3.h5' 2022-08-22T12:38:09,689 adding 'tests/data/C030796A-P3_diametrized.h5' 2022-08-22T12:38:09,697 adding 'tests/data/C030796A-P3_lite.h5' 2022-08-22T12:38:09,703 adding 'tests/data/C030796A-P3_lite_diametrized.h5' 2022-08-22T12:38:09,709 adding 'tests/data/C030796A-P3_lite_diametrized_1_sample.h5' 2022-08-22T12:38:09,715 adding 'tests/data/C030796A-P3_lite_diametrized_astrocyte.h5' 2022-08-22T12:38:09,718 adding 'tests/data/astro_model_data.json' 2022-08-22T12:38:09,720 adding 'tests/data/astro_model_params.json' 2022-08-22T12:38:09,722 adding 'tests/data/config.json' 2022-08-22T12:38:09,725 adding 'tests/data/model_data.json' 2022-08-22T12:38:09,727 adding 'tests/data/model_params.json' 2022-08-22T12:38:09,730 adding 'tests/data/neurondb.dat' 2022-08-22T12:38:09,732 adding 'tests/data/simpler_config.json' 2022-08-22T12:38:09,734 adding 'tests/data/simpler_model_data.json' 2022-08-22T12:38:09,736 adding 'tests/data/simpler_model_params.json' 2022-08-22T12:38:09,739 adding 'tests/data/simpler_morph_diametrized.asc' 2022-08-22T12:38:09,741 adding 'tests/data/small_morph_apical_diametrized.asc' 2022-08-22T12:38:09,744 adding 'tests/data/small_morph_diametrized.asc' 2022-08-22T12:38:09,747 adding 'tests/data/small_morph_several_apical_diametrized.asc' 2022-08-22T12:38:09,755 adding 'tests/expected_images/test_plot_cumulative_distribution.pdf' 2022-08-22T12:38:09,771 adding 'tests/expected_images/test_plot_diameter_diff_div.pdf' 2022-08-22T12:38:09,787 adding 'tests/expected_images/test_plot_diameter_diff_mult.pdf' 2022-08-22T12:38:09,792 adding 'tests/expected_images/test_plot_distribution_fit.pdf' 2022-08-22T12:38:09,802 adding 'tests/expected_images/test_violin_analysis.pdf' 2022-08-22T12:38:09,810 adding 'tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas.pdf' 2022-08-22T12:38:09,815 adding 'tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes.pdf' 2022-08-22T12:38:09,821 adding 'tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_areas_individual/0_L5_TPC_A_cumulative_section_path_distances_areas_C030796A-P3_lite.pdf' 2022-08-22T12:38:09,827 adding 'tests/expected_images/test_cumulative_analysis/analysis/L5_TPC_A_cumulative_section_path_distances_volumes_individual/0_L5_TPC_A_cumulative_section_path_distances_volumes_C030796A-P3_lite.pdf' 2022-08-22T12:38:09,835 adding 'tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes.pdf' 2022-08-22T12:38:09,844 adding 'tests/expected_images/test_make_cumulative_figures/cumulative_segment_radial_distances_volumes_individual/0_cumulative_segment_radial_distances_volumes.pdf' 2022-08-22T12:38:09,846 adding 'diameter_synthesis-0.5.1.dist-info/AUTHORS.md' 2022-08-22T12:38:09,860 adding 'diameter_synthesis-0.5.1.dist-info/LICENSE.txt' 2022-08-22T12:38:09,863 adding 'diameter_synthesis-0.5.1.dist-info/METADATA' 2022-08-22T12:38:09,865 adding 'diameter_synthesis-0.5.1.dist-info/WHEEL' 2022-08-22T12:38:09,867 adding 'diameter_synthesis-0.5.1.dist-info/entry_points.txt' 2022-08-22T12:38:09,869 adding 'diameter_synthesis-0.5.1.dist-info/top_level.txt' 2022-08-22T12:38:09,871 adding 'diameter_synthesis-0.5.1.dist-info/RECORD' 2022-08-22T12:38:09,891 removing build/bdist.linux-armv7l/wheel 2022-08-22T12:38:10,212 Building wheel for diameter-synthesis (pyproject.toml): finished with status 'done' 2022-08-22T12:38:10,265 Created wheel for diameter-synthesis: filename=diameter_synthesis-0.5.1-py3-none-any.whl size=482242 sha256=4ad64458cf863e0ac5f5ae3ebe207985435d0950ebe581f80e5d93a38a3056cd 2022-08-22T12:38:10,267 Stored in directory: /tmp/pip-ephem-wheel-cache-0lal_pxm/wheels/79/93/20/ca35a9616aad6ce4acebe5b785466b7fbd625cb25b314588aa 2022-08-22T12:38:10,299 Successfully built diameter-synthesis 2022-08-22T12:38:10,339 Removed build tracker: '/tmp/pip-build-tracker-z02hg_4r'