2022-08-28T20:05:30,640 Created temporary directory: /tmp/pip-ephem-wheel-cache-2ng9zzbw 2022-08-28T20:05:30,645 Created temporary directory: /tmp/pip-build-tracker-mlciw4kh 2022-08-28T20:05:30,646 Initialized build tracking at /tmp/pip-build-tracker-mlciw4kh 2022-08-28T20:05:30,646 Created build tracker: /tmp/pip-build-tracker-mlciw4kh 2022-08-28T20:05:30,647 Entered build tracker: /tmp/pip-build-tracker-mlciw4kh 2022-08-28T20:05:30,648 Created temporary directory: /tmp/pip-wheel-dda7bg99 2022-08-28T20:05:30,717 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-28T20:05:30,725 2 location(s) to search for versions of scfates: 2022-08-28T20:05:30,725 * https://pypi.org/simple/scfates/ 2022-08-28T20:05:30,725 * https://www.piwheels.org/simple/scfates/ 2022-08-28T20:05:30,726 Fetching project page and analyzing links: https://pypi.org/simple/scfates/ 2022-08-28T20:05:30,727 Getting page https://pypi.org/simple/scfates/ 2022-08-28T20:05:30,730 Found index url https://pypi.org/simple 2022-08-28T20:05:30,943 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/c8/03/e6d43ebff092f8c1042ad9c4c84c3a2fd2a74d50119417207638fa7a77b2/scFates-0.2.0-py3-none-any.whl#sha256=c510a025e857da397c6699f2520ac885abd7f3c7353552500157673377a4e159 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,944 Found link https://files.pythonhosted.org/packages/df/68/d9a1a569fefcf04a1675bbd84d1a4c1de8d6ea75b7ac3a495f8812c48cff/scFates-0.2.0.tar.gz#sha256=b81fde3ee9c9250836ca7037cba2a026d6484910949b5ba9c2ed2d4586fd28ca (from https://pypi.org/simple/scfates/), version: 0.2.0 2022-08-28T20:05:30,945 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/78/d1/9578642edb7d40dfd6ab29265ca96a6ba9b1a4d0dda326fdd9eb0e59ca51/scFates-0.2.2-py3-none-any.whl#sha256=f9d2f545eaed86b6b3ac904c3a67864b0388d8a973c980635e7aa7c4e7fb0b20 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,945 Found link https://files.pythonhosted.org/packages/f4/d8/683a17782ac36c709d0d18a787665bce6c4b0bf7e9045e721163223dd48d/scFates-0.2.2.tar.gz#sha256=056cbc9fa03c6cb60af495ee21e1969c9f4c88e9c203597e7e8b2e3b3f0d823f (from https://pypi.org/simple/scfates/), version: 0.2.2 2022-08-28T20:05:30,946 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/f0/bd/4c7ec15739819d09054a82d092cc73ade3a0fbd6908172db5805a36924aa/scFates-0.2.3-py3-none-any.whl#sha256=c0fd95cab2adf61169c913d1aeabb4f9619fcc2436a0ef01dcfe0f7553ad2777 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,947 Found link https://files.pythonhosted.org/packages/73/40/2a3d524efe515fda6fe43dc97be0c14de707fe2c9d3fe6f6c0c40a6e639e/scFates-0.2.3.tar.gz#sha256=f73c80fd93b12333169d4f48d82819375ca31816ab33b6f04e654dce2373e6fc (from https://pypi.org/simple/scfates/), version: 0.2.3 2022-08-28T20:05:30,947 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/5d/bd/5172e705dfcaae4821cc05f462d3168969eb9eb29afde05818fdff2fc4d5/scFates-0.2.4-py3-none-any.whl#sha256=cbdb0bfb5a39c2a249176068e273e574fd6cadbd17295b30eb4afb4bfcd8cf56 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,948 Found link https://files.pythonhosted.org/packages/4d/6b/724cfa3d4bb211b3bcf1d789dc515b42b5074923832e9e44da9966e8efbe/scFates-0.2.4.tar.gz#sha256=ce5393bb9c0980d92a77740c93c6645c46a45759c01adc91750a456210feb9ba (from https://pypi.org/simple/scfates/), version: 0.2.4 2022-08-28T20:05:30,949 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/85/69/40b83f533dad5209f5711de10a1ca41690be4415bc65b573501445205566/scFates-0.2.5-py3-none-any.whl#sha256=380431cf65b4c35957d2b90caadf1e19ef7eb6848a8bf4724230cf74780fd760 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,949 Found link 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https://files.pythonhosted.org/packages/4d/79/91491127cd6f4f34949c6a3f4b980da710265894ce0cd57aae80daf81929/scFates-0.2.7-py3-none-any.whl#sha256=464445719d0b3b51d355e8caf8c1ad25833424536a73a3a7fd77a67aae54be6f (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,952 Found link https://files.pythonhosted.org/packages/17/08/8bf07b14648657543544fee1b24401db2d1c03426fe112b96deb83f374cd/scFates-0.2.7.tar.gz#sha256=7cceeb1c71f260d3a7bd55dd0fb76408abadf6e50b60f87ed260d33d2caee7d1 (from https://pypi.org/simple/scfates/), version: 0.2.7 2022-08-28T20:05:30,952 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/08/c7/3d42188c1e5f408887dd513f3fc3a44413eee2b51aedc438021e559cecfb/scFates-0.3-py3-none-any.whl#sha256=54ba3b1fdae640b5615613b35376dd6bf6eda59a77ffd41fb1607a7ed7f710f7 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,953 Found link https://files.pythonhosted.org/packages/99/e7/4656eaa149509b0e2c48b33f0e40c40e7888b43c273af191d85781ac6f36/scFates-0.3.tar.gz#sha256=7a242ef2a5e68473538cf88bcbe06ea2286f962b651f1860612786e89f449ece (from https://pypi.org/simple/scfates/), version: 0.3 2022-08-28T20:05:30,954 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/b5/a2/428aa4ab0026412867a125e4ff289550b10bd16ae9a5abaa8b766d094d97/scFates-0.3.1-py3-none-any.whl#sha256=b8007837af16c091268d898deb88e40edf1ce98b75fb42efaeb3672600acb87a (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,954 Found link https://files.pythonhosted.org/packages/3e/8b/246d0eb9c540053de57dd85f3d56a27296c4760cf8778414ee674d05fe54/scFates-0.3.1.tar.gz#sha256=d647f1127cc13f2fb6bb3e8f57798ab4014ad427169b93eda072278cbb71f84d (from https://pypi.org/simple/scfates/), version: 0.3.1 2022-08-28T20:05:30,955 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/d7/72/17356f1a862f722866af98ee9387430499ccdafbc2e7ca393d2d3144de96/scFates-0.3.2-py3-none-any.whl#sha256=b5204f91d024cb8d64f03adc5e7720cffc52397757e4e5a19e3803430fcb1feb (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,956 Found link https://files.pythonhosted.org/packages/d9/34/b4fc99c86f2548abf9a502aa0c8d24161a453acab6f4fd6a2d14e4f190b7/scFates-0.3.2.tar.gz#sha256=f43b8df4d939d9d23ad21be6893a1d3c66703740ea81d608adef47092417cb8f (from https://pypi.org/simple/scfates/), version: 0.3.2 2022-08-28T20:05:30,956 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/c6/28/ee8c481f2e087d185a75e7341dccd98aa5d11c6af02dd91b26d45c324dc2/scFates-0.4.0-py3-none-any.whl#sha256=a6b9e73e0acadb195acf04c8ef5873b6950dabb0cd98d25deb1293f8421b796e (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,957 Found link https://files.pythonhosted.org/packages/5f/ac/945d3f6bd6f914fc31648879b2cda2a11c50bd28f5428cf267430811f286/scFates-0.4.0.tar.gz#sha256=9dabf72f2665ca321dd3109e5a6d1b1298c59f7fd14e4dd3f0ecf93f79a6d6c6 (from https://pypi.org/simple/scfates/), version: 0.4.0 2022-08-28T20:05:30,957 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/a5/e4/4497fb2fb844a8fbef84d7ddbf1797e4bd0185f4ee53c39173c75433a1fd/scFates-0.4.1-py3-none-any.whl#sha256=ebea053e3d4b760fb1f0d229592a899da9031bf14a37f0cd827cb22f19f124bb (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,958 Found link https://files.pythonhosted.org/packages/dd/ff/9480b50e1da0fbb772d06cd661f11b5d446b65b3a312a92e2d6501cce953/scFates-0.4.1.tar.gz#sha256=ba959587bafdc16fc36c849ac55db2f7b17ac16ca989d76b15963dc7b300ec65 (from https://pypi.org/simple/scfates/), version: 0.4.1 2022-08-28T20:05:30,959 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/5c/33/65cbb8c78d40e925ef572588cc1b8b1967768216eefe5c8f251b5544a49e/scFates-0.4.2-py3-none-any.whl#sha256=ef0781ff38ce89f930f1ca60781ce3a7a1848fbd3a53249dc774530f58597253 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,959 Found link https://files.pythonhosted.org/packages/09/23/66b1985521187f5f76f22d5b6a538fd0bb805f46c17f9d029fdcc32fcd7b/scFates-0.4.2.tar.gz#sha256=9ebdc271542743b37aa2b998e506bd322d5d22d20a34165af5dacb45bb6c1230 (from https://pypi.org/simple/scfates/), version: 0.4.2 2022-08-28T20:05:30,960 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/c0/9f/1b66b12e837de48ab223d25276aed38247ac3849840034dab28c98a88f96/scFates-0.8.0-py3-none-any.whl#sha256=9fb03e1fa65a43a008381bb70d4244d1bc1f9444ac5ca8f4f5aef6f9aebb1742 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,961 Found link https://files.pythonhosted.org/packages/30/14/56b2b1c074cf9da6a8d3dc09d91cee7842093149da1d37629d1193088659/scFates-0.8.0.tar.gz#sha256=9f0046d4fdc760d62e35198e4c7130c02b25a31ad4fd6482c4f7237e23b7a79f (from https://pypi.org/simple/scfates/), version: 0.8.0 2022-08-28T20:05:30,961 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/c6/f3/d908f2a6b106fd0f92dfad52bc8fe78d020fd87e2ac356d01c51bafcd75c/scFates-0.8.1-py3-none-any.whl#sha256=3ed281aa12e285100958b045c5d2979e082638c9bf6549b0f7ca91f4640f13ff (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,962 Found link https://files.pythonhosted.org/packages/5f/89/039e940d9c8eb28943dd880ef3887974964c049753adeb08cfd47d14c16b/scFates-0.8.1.tar.gz#sha256=4941f81bb56c4b3439e2f8989d967010f729727f93757a910e0ee26d572177dd (from https://pypi.org/simple/scfates/), version: 0.8.1 2022-08-28T20:05:30,963 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/0c/1e/2f5b89e38cf0d38eec55ee7c7d861a546f86aa5d7d600effd10b322ab4a8/scFates-0.9.0-py3-none-any.whl#sha256=87895a032ce9ddb8e2a4a4632f66ca9fe66b49a15f293aedb967f6e89861d99e (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,963 Found link https://files.pythonhosted.org/packages/7d/d3/ca5db52a7ddcbdeccf53b82509edb89109a8cb55df3ed336e68790f98bcb/scFates-0.9.0.tar.gz#sha256=54a75994599c553335c3e641397d514e8c3ead869b04809f7959d6f16d72d7e7 (from https://pypi.org/simple/scfates/), version: 0.9.0 2022-08-28T20:05:30,964 Skipping link: No binaries permitted for scfates: https://files.pythonhosted.org/packages/18/45/44d0e2644c9cb868d688965efabdcbe0a71ad3306fa220a13e9a5f5949c1/scFates-0.9.1-py3-none-any.whl#sha256=d5205ee3a5062e5be53afddb22ec2d319f07956103e0b091da109f47938ee845 (from https://pypi.org/simple/scfates/) 2022-08-28T20:05:30,964 Found link https://files.pythonhosted.org/packages/d3/64/6aea020d8e20f9112b56731e4f65b14e98556c107bd29b1ad12d4a8b0f03/scFates-0.9.1.tar.gz#sha256=6ed03e7ea448b649319a779b29ff13a1c170549973e72efa9f2ce979532b2cd2 (from https://pypi.org/simple/scfates/), version: 0.9.1 2022-08-28T20:05:30,965 Fetching project page and analyzing links: https://www.piwheels.org/simple/scfates/ 2022-08-28T20:05:30,966 Getting page https://www.piwheels.org/simple/scfates/ 2022-08-28T20:05:30,968 Found index url https://www.piwheels.org/simple 2022-08-28T20:05:31,212 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.9.0-py3-none-any.whl#sha256=e25fd956821841cd9ca3398d3a19ac8eece9bdb7d19d09bde0e4e627e464f9bb (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,212 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.8.1-py3-none-any.whl#sha256=7da7b2105073f279dad6cfa16142698974bcf247881a170d8fc62deec7d2f0fb (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,213 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.8.0-py3-none-any.whl#sha256=bedfd4a8333c9065d99d3eb19233c6cf60aea40cbe4f6704cd6eb3d27e45a714 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,214 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.4.2-py3-none-any.whl#sha256=34b6c3e8235192145f0788fb9c46efc8f241e3df88c0814260416c98a32c34b6 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,214 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.4.1-py3-none-any.whl#sha256=8d52697d1a268cb49fa45f45e78bc74c8b41e9f03068584d83027515edf3c157 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,215 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.4.0-py3-none-any.whl#sha256=5fbd80e01da9e6f354377fca11c7e935162253de5943a0305cd08ca9c9633d6e (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,215 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.3.2-py3-none-any.whl#sha256=37c174941327a36440f99f2d87bf8fb97fa16ab9cd7c2ea096af222bcdeb55cb (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,216 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.3.1-py3-none-any.whl#sha256=ceab054e78baed6cd52bde83305038b4afd171dd916f73c5bad648a38b60299a (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,216 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.2.5-py3-none-any.whl#sha256=380431cf65b4c35957d2b90caadf1e19ef7eb6848a8bf4724230cf74780fd760 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,217 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.2.4-py3-none-any.whl#sha256=cbdb0bfb5a39c2a249176068e273e574fd6cadbd17295b30eb4afb4bfcd8cf56 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,217 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.2.3-py3-none-any.whl#sha256=c0fd95cab2adf61169c913d1aeabb4f9619fcc2436a0ef01dcfe0f7553ad2777 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,218 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.2.2-py3-none-any.whl#sha256=f9d2f545eaed86b6b3ac904c3a67864b0388d8a973c980635e7aa7c4e7fb0b20 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,218 Skipping link: No binaries permitted for scfates: https://www.piwheels.org/simple/scfates/scFates-0.2.0-py3-none-any.whl#sha256=c510a025e857da397c6699f2520ac885abd7f3c7353552500157673377a4e159 (from https://www.piwheels.org/simple/scfates/) 2022-08-28T20:05:31,219 Skipping link: not a file: https://www.piwheels.org/simple/scfates/ 2022-08-28T20:05:31,219 Skipping link: not a file: https://pypi.org/simple/scfates/ 2022-08-28T20:05:31,259 Given no hashes to check 1 links for project 'scfates': discarding no candidates 2022-08-28T20:05:31,290 Collecting scfates==0.9.1 2022-08-28T20:05:31,295 Created temporary directory: /tmp/pip-unpack-b5zn7fou 2022-08-28T20:05:31,557 Downloading scFates-0.9.1.tar.gz (98 kB) 2022-08-28T20:05:31,915 Added scfates==0.9.1 from https://files.pythonhosted.org/packages/d3/64/6aea020d8e20f9112b56731e4f65b14e98556c107bd29b1ad12d4a8b0f03/scFates-0.9.1.tar.gz#sha256=6ed03e7ea448b649319a779b29ff13a1c170549973e72efa9f2ce979532b2cd2 to build tracker '/tmp/pip-build-tracker-mlciw4kh' 2022-08-28T20:05:31,926 Created temporary directory: /tmp/pip-build-env-ex0yw0n_ 2022-08-28T20:05:31,939 Created temporary directory: /tmp/pip-standalone-pip-socmij5q 2022-08-28T20:05:34,151 Installing build dependencies: started 2022-08-28T20:05:34,154 Running command pip subprocess to install build dependencies 2022-08-28T20:05:43,782 Using pip 22.1.2 from /tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip (python 3.7) 2022-08-28T20:05:45,577 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-28T20:05:50,016 Collecting setuptools 2022-08-28T20:05:50,284 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.3.0-py3-none-any.whl (1.2 MB) 2022-08-28T20:05:51,315 Collecting setuptools_scm 2022-08-28T20:05:51,351 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-08-28T20:05:51,908 Collecting wheel 2022-08-28T20:05:51,944 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-08-28T20:05:52,253 Collecting typing-extensions 2022-08-28T20:05:52,287 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.3.0-py3-none-any.whl (25 kB) 2022-08-28T20:05:52,706 Collecting packaging>=20.0 2022-08-28T20:05:52,742 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-08-28T20:05:53,752 Collecting importlib-metadata 2022-08-28T20:05:53,786 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-4.12.0-py3-none-any.whl (21 kB) 2022-08-28T20:05:54,072 Collecting tomli>=1.0.0 2022-08-28T20:05:54,105 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-08-28T20:05:54,844 Collecting pyparsing!=3.0.5,>=2.0.2 2022-08-28T20:05:54,888 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-08-28T20:05:55,476 Collecting zipp>=0.5 2022-08-28T20:05:55,510 Using cached https://www.piwheels.org/simple/zipp/zipp-3.8.1-py3-none-any.whl (5.6 kB) 2022-08-28T20:06:09,534 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, pyparsing, packaging, importlib-metadata, setuptools_scm 2022-08-28T20:06:09,870 Creating /tmp/pip-build-env-ex0yw0n_/overlay/bin 2022-08-28T20:06:09,876 changing mode of /tmp/pip-build-env-ex0yw0n_/overlay/bin/wheel to 755 2022-08-28T20:06:16,162 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2022-08-28T20:06:16,163 espnet-onnx 0.1.9 requires espnet-tts-frontend, which is not installed. 2022-08-28T20:06:16,163 espnet-onnx 0.1.9 requires g2p-en, which is not installed. 2022-08-28T20:06:16,164 espnet-onnx 0.1.9 requires jamo==0.4.1, which is not installed. 2022-08-28T20:06:16,164 espnet-onnx 0.1.9 requires librosa>=0.8.0, which is not installed. 2022-08-28T20:06:16,164 espnet-onnx 0.1.9 requires onnxruntime>=1.4.0, which is not installed. 2022-08-28T20:06:16,165 espnet-onnx 0.1.9 requires sentencepiece!=0.1.92,>=0.1.91, which is not installed. 2022-08-28T20:06:16,165 espnet-onnx 0.1.9 requires typeguard>=2.7.0, which is not installed. 2022-08-28T20:06:16,165 espnet-onnx 0.1.9 requires numpy<=1.21.3, but you have numpy 1.21.4 which is incompatible. 2022-08-28T20:06:16,165 anonfile 0.2.7 requires importlib-metadata==4.0.1, but you have importlib-metadata 4.12.0 which is incompatible. 2022-08-28T20:06:16,166 anonfile 0.2.7 requires requests==2.26.0, but you have requests 2.27.1 which is incompatible. 2022-08-28T20:06:16,166 Successfully installed importlib-metadata-4.12.0 packaging-21.3 pyparsing-3.0.9 setuptools-65.3.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.3.0 wheel-0.37.1 zipp-3.8.1 2022-08-28T20:06:16,425 --- Logging error --- 2022-08-28T20:06:16,426 Traceback (most recent call last): 2022-08-28T20:06:16,426 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-08-28T20:06:16,426 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-08-28T20:06:16,427 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-08-28T20:06:16,427 extend(render(renderable, render_options)) 2022-08-28T20:06:16,427 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-08-28T20:06:16,428 for render_output in iter_render: 2022-08-28T20:06:16,428 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-08-28T20:06:16,428 for line in lines: 2022-08-28T20:06:16,429 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-08-28T20:06:16,429 for segment in segments: 2022-08-28T20:06:16,429 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-08-28T20:06:16,430 renderable = rich_cast(renderable) 2022-08-28T20:06:16,430 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-08-28T20:06:16,430 renderable = cast_method() 2022-08-28T20:06:16,430 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-08-28T20:06:16,431 pip_cmd = get_best_invocation_for_this_pip() 2022-08-28T20:06:16,431 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-08-28T20:06:16,431 os.path.join(binary_prefix, exe_name), 2022-08-28T20:06:16,432 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-08-28T20:06:16,432 s2 = os.stat(f2) 2022-08-28T20:06:16,432 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-08-28T20:06:16,433 Call stack: 2022-08-28T20:06:16,433 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-08-28T20:06:16,433 "__main__", mod_spec) 2022-08-28T20:06:16,434 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-08-28T20:06:16,434 exec(code, run_globals) 2022-08-28T20:06:16,434 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/__main__.py", line 31, in 2022-08-28T20:06:16,434 sys.exit(_main()) 2022-08-28T20:06:16,435 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-08-28T20:06:16,435 return command.main(cmd_args) 2022-08-28T20:06:16,435 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-08-28T20:06:16,436 return self._main(args) 2022-08-28T20:06:16,436 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-08-28T20:06:16,436 self.handle_pip_version_check(options) 2022-08-28T20:06:16,436 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-08-28T20:06:16,437 pip_self_version_check(session, options) 2022-08-28T20:06:16,437 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-08-28T20:06:16,437 logger.info("[present-rich] %s", upgrade_prompt) 2022-08-28T20:06:16,438 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-08-28T20:06:16,438 self._log(INFO, msg, args, **kwargs) 2022-08-28T20:06:16,438 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-08-28T20:06:16,439 self.handle(record) 2022-08-28T20:06:16,439 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-08-28T20:06:16,439 self.callHandlers(record) 2022-08-28T20:06:16,439 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-08-28T20:06:16,440 hdlr.handle(record) 2022-08-28T20:06:16,440 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-08-28T20:06:16,440 self.emit(record) 2022-08-28T20:06:16,441 File "/tmp/pip-standalone-pip-socmij5q/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-08-28T20:06:16,441 self.handleError(record) 2022-08-28T20:06:16,441 Message: '[present-rich] %s' 2022-08-28T20:06:16,442 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-08-28T20:06:16,982 Installing build dependencies: finished with status 'done' 2022-08-28T20:06:17,009 Getting requirements to build wheel: started 2022-08-28T20:06:17,011 Running command Getting requirements to build wheel 2022-08-28T20:06:19,236 Getting requirements to build wheel: finished with status 'done' 2022-08-28T20:06:19,289 Created temporary directory: /tmp/pip-standalone-pip-e74q0c6l 2022-08-28T20:06:21,473 Installing backend dependencies: started 2022-08-28T20:06:21,475 Running command pip subprocess to install backend dependencies 2022-08-28T20:06:31,095 Using pip 22.1.2 from /tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip (python 3.7) 2022-08-28T20:06:32,884 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-28T20:06:33,925 Collecting setuptools-git-versioning 2022-08-28T20:06:34,008 Using cached https://www.piwheels.org/simple/setuptools-git-versioning/setuptools_git_versioning-1.10.0-py3-none-any.whl (7.6 kB) 2022-08-28T20:06:34,453 Collecting packaging 2022-08-28T20:06:34,488 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-08-28T20:06:38,591 Collecting setuptools 2022-08-28T20:06:38,858 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.3.0-py3-none-any.whl (1.2 MB) 2022-08-28T20:06:39,141 Collecting toml>=0.10.2 2022-08-28T20:06:39,191 Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB) 2022-08-28T20:06:39,900 Collecting pyparsing!=3.0.5,>=2.0.2 2022-08-28T20:06:39,939 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-08-28T20:06:53,429 Installing collected packages: toml, setuptools, pyparsing, packaging, setuptools-git-versioning 2022-08-28T20:06:59,207 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2022-08-28T20:06:59,208 espnet-onnx 0.1.9 requires espnet-tts-frontend, which is not installed. 2022-08-28T20:06:59,208 espnet-onnx 0.1.9 requires g2p-en, which is not installed. 2022-08-28T20:06:59,208 espnet-onnx 0.1.9 requires jamo==0.4.1, which is not installed. 2022-08-28T20:06:59,209 espnet-onnx 0.1.9 requires librosa>=0.8.0, which is not installed. 2022-08-28T20:06:59,209 espnet-onnx 0.1.9 requires onnxruntime>=1.4.0, which is not installed. 2022-08-28T20:06:59,209 espnet-onnx 0.1.9 requires sentencepiece!=0.1.92,>=0.1.91, which is not installed. 2022-08-28T20:06:59,210 espnet-onnx 0.1.9 requires typeguard>=2.7.0, which is not installed. 2022-08-28T20:06:59,210 espnet-onnx 0.1.9 requires numpy<=1.21.3, but you have numpy 1.21.4 which is incompatible. 2022-08-28T20:06:59,210 Successfully installed packaging-21.3 pyparsing-3.0.9 setuptools-65.3.0 setuptools-git-versioning-1.10.0 toml-0.10.2 2022-08-28T20:06:59,450 --- Logging error --- 2022-08-28T20:06:59,450 Traceback (most recent call last): 2022-08-28T20:06:59,450 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-08-28T20:06:59,451 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-08-28T20:06:59,451 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-08-28T20:06:59,451 extend(render(renderable, render_options)) 2022-08-28T20:06:59,452 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-08-28T20:06:59,452 for render_output in iter_render: 2022-08-28T20:06:59,452 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-08-28T20:06:59,453 for line in lines: 2022-08-28T20:06:59,453 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-08-28T20:06:59,453 for segment in segments: 2022-08-28T20:06:59,454 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-08-28T20:06:59,454 renderable = rich_cast(renderable) 2022-08-28T20:06:59,454 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-08-28T20:06:59,455 renderable = cast_method() 2022-08-28T20:06:59,455 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-08-28T20:06:59,455 pip_cmd = get_best_invocation_for_this_pip() 2022-08-28T20:06:59,456 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-08-28T20:06:59,456 os.path.join(binary_prefix, exe_name), 2022-08-28T20:06:59,456 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-08-28T20:06:59,456 s2 = os.stat(f2) 2022-08-28T20:06:59,457 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-08-28T20:06:59,457 Call stack: 2022-08-28T20:06:59,457 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-08-28T20:06:59,458 "__main__", mod_spec) 2022-08-28T20:06:59,458 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-08-28T20:06:59,458 exec(code, run_globals) 2022-08-28T20:06:59,459 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/__main__.py", line 31, in 2022-08-28T20:06:59,459 sys.exit(_main()) 2022-08-28T20:06:59,459 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-08-28T20:06:59,459 return command.main(cmd_args) 2022-08-28T20:06:59,460 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-08-28T20:06:59,460 return self._main(args) 2022-08-28T20:06:59,460 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-08-28T20:06:59,461 self.handle_pip_version_check(options) 2022-08-28T20:06:59,461 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-08-28T20:06:59,461 pip_self_version_check(session, options) 2022-08-28T20:06:59,462 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-08-28T20:06:59,462 logger.info("[present-rich] %s", upgrade_prompt) 2022-08-28T20:06:59,462 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-08-28T20:06:59,462 self._log(INFO, msg, args, **kwargs) 2022-08-28T20:06:59,463 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-08-28T20:06:59,463 self.handle(record) 2022-08-28T20:06:59,463 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-08-28T20:06:59,464 self.callHandlers(record) 2022-08-28T20:06:59,464 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-08-28T20:06:59,464 hdlr.handle(record) 2022-08-28T20:06:59,465 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-08-28T20:06:59,465 self.emit(record) 2022-08-28T20:06:59,465 File "/tmp/pip-standalone-pip-e74q0c6l/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-08-28T20:06:59,466 self.handleError(record) 2022-08-28T20:06:59,466 Message: '[present-rich] %s' 2022-08-28T20:06:59,466 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-08-28T20:06:59,967 Installing backend dependencies: finished with status 'done' 2022-08-28T20:06:59,988 Created temporary directory: /tmp/pip-modern-metadata-herj19dn 2022-08-28T20:06:59,995 Preparing metadata (pyproject.toml): started 2022-08-28T20:06:59,997 Running command Preparing metadata (pyproject.toml) 2022-08-28T20:07:07,800 running dist_info 2022-08-28T20:07:08,453 creating /tmp/pip-modern-metadata-herj19dn/scFates.egg-info 2022-08-28T20:07:09,075 writing /tmp/pip-modern-metadata-herj19dn/scFates.egg-info/PKG-INFO 2022-08-28T20:07:09,665 writing dependency_links to /tmp/pip-modern-metadata-herj19dn/scFates.egg-info/dependency_links.txt 2022-08-28T20:07:12,582 writing requirements to /tmp/pip-modern-metadata-herj19dn/scFates.egg-info/requires.txt 2022-08-28T20:07:13,166 writing top-level names to /tmp/pip-modern-metadata-herj19dn/scFates.egg-info/top_level.txt 2022-08-28T20:07:13,169 writing manifest file '/tmp/pip-modern-metadata-herj19dn/scFates.egg-info/SOURCES.txt' 2022-08-28T20:07:14,006 /tmp/pip-build-env-ex0yw0n_/normal/lib/python3.7/site-packages/setuptools_git_versioning.py:155: UserWarning: `version_config` option is deprecated since setuptools-git-versioning v1.8.0 and will be dropped in v2.0.0 2022-08-28T20:07:14,006 Please rename it to `setuptools_git_versioning` 2022-08-28T20:07:14,006 category=UserWarning, 2022-08-28T20:07:14,007 listing git files failed - pretending there aren't any 2022-08-28T20:07:14,026 reading manifest file '/tmp/pip-modern-metadata-herj19dn/scFates.egg-info/SOURCES.txt' 2022-08-28T20:07:14,030 reading manifest template 'MANIFEST.in' 2022-08-28T20:07:14,035 adding license file 'LICENSE' 2022-08-28T20:07:14,046 writing manifest file '/tmp/pip-modern-metadata-herj19dn/scFates.egg-info/SOURCES.txt' 2022-08-28T20:07:14,049 creating '/tmp/pip-modern-metadata-herj19dn/scFates-0.9.1.dist-info' 2022-08-28T20:07:14,346 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-28T20:07:14,600 Preparing metadata (pyproject.toml): finished with status 'done' 2022-08-28T20:07:14,616 Source in /tmp/pip-wheel-dda7bg99/scfates_5eef5294f94c4fe0b42489de43f0fa3f has version 0.9.1, which satisfies requirement scfates==0.9.1 from https://files.pythonhosted.org/packages/d3/64/6aea020d8e20f9112b56731e4f65b14e98556c107bd29b1ad12d4a8b0f03/scFates-0.9.1.tar.gz#sha256=6ed03e7ea448b649319a779b29ff13a1c170549973e72efa9f2ce979532b2cd2 2022-08-28T20:07:14,618 Removed scfates==0.9.1 from https://files.pythonhosted.org/packages/d3/64/6aea020d8e20f9112b56731e4f65b14e98556c107bd29b1ad12d4a8b0f03/scFates-0.9.1.tar.gz#sha256=6ed03e7ea448b649319a779b29ff13a1c170549973e72efa9f2ce979532b2cd2 from build tracker '/tmp/pip-build-tracker-mlciw4kh' 2022-08-28T20:07:14,628 Created temporary directory: /tmp/pip-unpack-5mqx_f2g 2022-08-28T20:07:14,629 Building wheels for collected packages: scfates 2022-08-28T20:07:14,640 Created temporary directory: /tmp/pip-wheel-nvfxnfw0 2022-08-28T20:07:14,640 Destination directory: /tmp/pip-wheel-nvfxnfw0 2022-08-28T20:07:14,646 Building wheel for scfates (pyproject.toml): started 2022-08-28T20:07:14,648 Running command Building wheel for scfates (pyproject.toml) 2022-08-28T20:07:22,024 running bdist_wheel 2022-08-28T20:07:23,398 running build 2022-08-28T20:07:23,398 running build_py 2022-08-28T20:07:24,089 creating build 2022-08-28T20:07:24,090 creating build/lib 2022-08-28T20:07:24,094 creating build/lib/scFates 2022-08-28T20:07:24,096 copying scFates/pl.py -> build/lib/scFates 2022-08-28T20:07:24,100 copying scFates/tl.py -> build/lib/scFates 2022-08-28T20:07:24,103 copying scFates/__init__.py -> build/lib/scFates 2022-08-28T20:07:24,107 copying scFates/settings.py -> build/lib/scFates 2022-08-28T20:07:24,110 copying scFates/pp.py -> build/lib/scFates 2022-08-28T20:07:24,113 copying scFates/logging.py -> build/lib/scFates 2022-08-28T20:07:24,119 creating build/lib/scFates/preprocessing 2022-08-28T20:07:24,121 copying scFates/preprocessing/__init__.py -> build/lib/scFates/preprocessing 2022-08-28T20:07:24,124 copying scFates/preprocessing/pagoda2.py -> build/lib/scFates/preprocessing 2022-08-28T20:07:24,129 copying scFates/preprocessing/diffusion.py -> build/lib/scFates/preprocessing 2022-08-28T20:07:24,134 creating build/lib/scFates/get 2022-08-28T20:07:24,135 copying scFates/get/get.py -> build/lib/scFates/get 2022-08-28T20:07:24,139 copying scFates/get/__init__.py -> build/lib/scFates/get 2022-08-28T20:07:24,145 creating build/lib/scFates/tools 2022-08-28T20:07:24,147 copying scFates/tools/graph_operations.py -> build/lib/scFates/tools 2022-08-28T20:07:24,152 copying scFates/tools/covariate.py -> build/lib/scFates/tools 2022-08-28T20:07:24,156 copying scFates/tools/pseudotime.py -> build/lib/scFates/tools 2022-08-28T20:07:24,167 copying scFates/tools/__init__.py -> build/lib/scFates/tools 2022-08-28T20:07:24,170 copying scFates/tools/test_association.py -> build/lib/scFates/tools 2022-08-28T20:07:24,175 copying scFates/tools/bifurcation_tools.py -> build/lib/scFates/tools 2022-08-28T20:07:24,180 copying scFates/tools/root.py -> build/lib/scFates/tools 2022-08-28T20:07:24,184 copying scFates/tools/cluster.py -> build/lib/scFates/tools 2022-08-28T20:07:24,187 copying scFates/tools/slide_cors.py -> build/lib/scFates/tools 2022-08-28T20:07:24,191 copying scFates/tools/correlation_tools.py -> build/lib/scFates/tools 2022-08-28T20:07:24,196 copying scFates/tools/linearity_deviation.py -> build/lib/scFates/tools 2022-08-28T20:07:24,200 copying scFates/tools/conversion.py -> build/lib/scFates/tools 2022-08-28T20:07:24,204 copying scFates/tools/graph_fitting.py -> build/lib/scFates/tools 2022-08-28T20:07:24,208 copying scFates/tools/fit.py -> build/lib/scFates/tools 2022-08-28T20:07:24,212 copying scFates/tools/utils.py -> build/lib/scFates/tools 2022-08-28T20:07:24,216 copying scFates/tools/dendrogram.py -> build/lib/scFates/tools 2022-08-28T20:07:24,221 creating build/lib/scFates/datasets 2022-08-28T20:07:24,223 copying scFates/datasets/__init__.py -> build/lib/scFates/datasets 2022-08-28T20:07:24,227 copying scFates/datasets/_datasets.py -> build/lib/scFates/datasets 2022-08-28T20:07:24,233 creating build/lib/scFates/plot 2022-08-28T20:07:24,234 copying scFates/plot/covariate.py -> build/lib/scFates/plot 2022-08-28T20:07:24,238 copying scFates/plot/palettes.py -> build/lib/scFates/plot 2022-08-28T20:07:24,241 copying scFates/plot/__init__.py -> build/lib/scFates/plot 2022-08-28T20:07:24,244 copying scFates/plot/synchro_path.py -> build/lib/scFates/plot 2022-08-28T20:07:24,249 copying scFates/plot/test_fork.py -> build/lib/scFates/plot 2022-08-28T20:07:24,252 copying scFates/plot/test_association.py -> build/lib/scFates/plot 2022-08-28T20:07:24,255 copying scFates/plot/features.py -> build/lib/scFates/plot 2022-08-28T20:07:24,260 copying scFates/plot/slide_cors.py -> build/lib/scFates/plot 2022-08-28T20:07:24,264 copying scFates/plot/linearity_deviation.py -> build/lib/scFates/plot 2022-08-28T20:07:24,267 copying scFates/plot/module_inclusion.py -> build/lib/scFates/plot 2022-08-28T20:07:24,271 copying scFates/plot/utils.py -> build/lib/scFates/plot 2022-08-28T20:07:24,275 copying scFates/plot/matrix.py -> build/lib/scFates/plot 2022-08-28T20:07:24,279 copying scFates/plot/palette_tools.py -> build/lib/scFates/plot 2022-08-28T20:07:24,283 copying scFates/plot/trajectory.py -> build/lib/scFates/plot 2022-08-28T20:07:24,287 copying scFates/plot/binned_pseudotime_meta.py -> build/lib/scFates/plot 2022-08-28T20:07:24,291 copying scFates/plot/milestones.py -> build/lib/scFates/plot 2022-08-28T20:07:24,294 copying scFates/plot/modules.py -> build/lib/scFates/plot 2022-08-28T20:07:24,298 copying scFates/plot/dendrogram.py -> build/lib/scFates/plot 2022-08-28T20:07:24,300 running egg_info 2022-08-28T20:07:25,592 writing scFates.egg-info/PKG-INFO 2022-08-28T20:07:26,184 writing dependency_links to scFates.egg-info/dependency_links.txt 2022-08-28T20:07:29,131 writing requirements to scFates.egg-info/requires.txt 2022-08-28T20:07:29,722 writing top-level names to scFates.egg-info/top_level.txt 2022-08-28T20:07:29,865 /tmp/pip-build-env-ex0yw0n_/normal/lib/python3.7/site-packages/setuptools_git_versioning.py:155: UserWarning: `version_config` option is deprecated since setuptools-git-versioning v1.8.0 and will be dropped in v2.0.0 2022-08-28T20:07:29,866 Please rename it to `setuptools_git_versioning` 2022-08-28T20:07:29,866 category=UserWarning, 2022-08-28T20:07:29,866 listing git files failed - pretending there aren't any 2022-08-28T20:07:29,886 reading manifest file 'scFates.egg-info/SOURCES.txt' 2022-08-28T20:07:29,895 reading manifest template 'MANIFEST.in' 2022-08-28T20:07:29,898 adding license file 'LICENSE' 2022-08-28T20:07:29,910 writing manifest file 'scFates.egg-info/SOURCES.txt' 2022-08-28T20:07:31,209 installing to build/bdist.linux-armv7l/wheel 2022-08-28T20:07:31,210 running install 2022-08-28T20:07:31,272 running install_lib 2022-08-28T20:07:31,906 creating build/bdist.linux-armv7l 2022-08-28T20:07:31,907 creating build/bdist.linux-armv7l/wheel 2022-08-28T20:07:31,910 creating build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:31,912 copying build/lib/scFates/pl.py -> build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:31,917 copying build/lib/scFates/tl.py -> build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:31,920 copying build/lib/scFates/__init__.py -> build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:31,924 copying build/lib/scFates/settings.py -> build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:31,929 creating build/bdist.linux-armv7l/wheel/scFates/preprocessing 2022-08-28T20:07:31,930 copying build/lib/scFates/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/scFates/preprocessing 2022-08-28T20:07:31,934 copying build/lib/scFates/preprocessing/pagoda2.py -> build/bdist.linux-armv7l/wheel/scFates/preprocessing 2022-08-28T20:07:31,939 copying build/lib/scFates/preprocessing/diffusion.py -> build/bdist.linux-armv7l/wheel/scFates/preprocessing 2022-08-28T20:07:31,944 creating build/bdist.linux-armv7l/wheel/scFates/get 2022-08-28T20:07:31,946 copying build/lib/scFates/get/get.py -> build/bdist.linux-armv7l/wheel/scFates/get 2022-08-28T20:07:31,950 copying build/lib/scFates/get/__init__.py -> build/bdist.linux-armv7l/wheel/scFates/get 2022-08-28T20:07:31,955 creating build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,957 copying build/lib/scFates/tools/graph_operations.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,962 copying build/lib/scFates/tools/covariate.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,966 copying build/lib/scFates/tools/pseudotime.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,971 copying build/lib/scFates/tools/__init__.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,974 copying build/lib/scFates/tools/test_association.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,978 copying build/lib/scFates/tools/bifurcation_tools.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,983 copying build/lib/scFates/tools/root.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,988 copying build/lib/scFates/tools/cluster.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,991 copying build/lib/scFates/tools/slide_cors.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:31,995 copying build/lib/scFates/tools/correlation_tools.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,000 copying build/lib/scFates/tools/linearity_deviation.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,005 copying build/lib/scFates/tools/conversion.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,008 copying build/lib/scFates/tools/graph_fitting.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,013 copying build/lib/scFates/tools/fit.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,017 copying build/lib/scFates/tools/utils.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,021 copying build/lib/scFates/tools/dendrogram.py -> build/bdist.linux-armv7l/wheel/scFates/tools 2022-08-28T20:07:32,027 creating build/bdist.linux-armv7l/wheel/scFates/datasets 2022-08-28T20:07:32,028 copying build/lib/scFates/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/scFates/datasets 2022-08-28T20:07:32,032 copying build/lib/scFates/datasets/_datasets.py -> build/bdist.linux-armv7l/wheel/scFates/datasets 2022-08-28T20:07:32,035 copying build/lib/scFates/pp.py -> build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:32,039 copying build/lib/scFates/logging.py -> build/bdist.linux-armv7l/wheel/scFates 2022-08-28T20:07:32,044 creating build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,046 copying build/lib/scFates/plot/covariate.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,050 copying build/lib/scFates/plot/palettes.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,054 copying build/lib/scFates/plot/__init__.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,057 copying build/lib/scFates/plot/synchro_path.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,061 copying build/lib/scFates/plot/test_fork.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,065 copying build/lib/scFates/plot/test_association.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,068 copying build/lib/scFates/plot/features.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,073 copying build/lib/scFates/plot/slide_cors.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,078 copying build/lib/scFates/plot/linearity_deviation.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,081 copying build/lib/scFates/plot/module_inclusion.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,085 copying build/lib/scFates/plot/utils.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,089 copying build/lib/scFates/plot/matrix.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,094 copying build/lib/scFates/plot/palette_tools.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,098 copying build/lib/scFates/plot/trajectory.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,103 copying build/lib/scFates/plot/binned_pseudotime_meta.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,107 copying build/lib/scFates/plot/milestones.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,111 copying build/lib/scFates/plot/modules.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,115 copying build/lib/scFates/plot/dendrogram.py -> build/bdist.linux-armv7l/wheel/scFates/plot 2022-08-28T20:07:32,118 running install_egg_info 2022-08-28T20:07:32,759 Copying scFates.egg-info to build/bdist.linux-armv7l/wheel/scFates-0.9.1-py3.7.egg-info 2022-08-28T20:07:32,785 running install_scripts 2022-08-28T20:07:33,009 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-28T20:07:33,018 creating build/bdist.linux-armv7l/wheel/scFates-0.9.1.dist-info/WHEEL 2022-08-28T20:07:33,022 creating '/tmp/pip-wheel-nvfxnfw0/tmp92hrfmor/scFates-0.9.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-28T20:07:33,027 adding 'scFates/__init__.py' 2022-08-28T20:07:33,031 adding 'scFates/logging.py' 2022-08-28T20:07:33,033 adding 'scFates/pl.py' 2022-08-28T20:07:33,035 adding 'scFates/pp.py' 2022-08-28T20:07:33,037 adding 'scFates/settings.py' 2022-08-28T20:07:33,039 adding 'scFates/tl.py' 2022-08-28T20:07:33,043 adding 'scFates/datasets/__init__.py' 2022-08-28T20:07:33,045 adding 'scFates/datasets/_datasets.py' 2022-08-28T20:07:33,048 adding 'scFates/get/__init__.py' 2022-08-28T20:07:33,051 adding 'scFates/get/get.py' 2022-08-28T20:07:33,055 adding 'scFates/plot/__init__.py' 2022-08-28T20:07:33,058 adding 'scFates/plot/binned_pseudotime_meta.py' 2022-08-28T20:07:33,061 adding 'scFates/plot/covariate.py' 2022-08-28T20:07:33,064 adding 'scFates/plot/dendrogram.py' 2022-08-28T20:07:33,071 adding 'scFates/plot/features.py' 2022-08-28T20:07:33,075 adding 'scFates/plot/linearity_deviation.py' 2022-08-28T20:07:33,080 adding 'scFates/plot/matrix.py' 2022-08-28T20:07:33,083 adding 'scFates/plot/milestones.py' 2022-08-28T20:07:33,086 adding 'scFates/plot/module_inclusion.py' 2022-08-28T20:07:33,089 adding 'scFates/plot/modules.py' 2022-08-28T20:07:33,092 adding 'scFates/plot/palette_tools.py' 2022-08-28T20:07:33,095 adding 'scFates/plot/palettes.py' 2022-08-28T20:07:33,099 adding 'scFates/plot/slide_cors.py' 2022-08-28T20:07:33,103 adding 'scFates/plot/synchro_path.py' 2022-08-28T20:07:33,106 adding 'scFates/plot/test_association.py' 2022-08-28T20:07:33,108 adding 'scFates/plot/test_fork.py' 2022-08-28T20:07:33,116 adding 'scFates/plot/trajectory.py' 2022-08-28T20:07:33,120 adding 'scFates/plot/utils.py' 2022-08-28T20:07:33,123 adding 'scFates/preprocessing/__init__.py' 2022-08-28T20:07:33,127 adding 'scFates/preprocessing/diffusion.py' 2022-08-28T20:07:33,131 adding 'scFates/preprocessing/pagoda2.py' 2022-08-28T20:07:33,135 adding 'scFates/tools/__init__.py' 2022-08-28T20:07:33,142 adding 'scFates/tools/bifurcation_tools.py' 2022-08-28T20:07:33,145 adding 'scFates/tools/cluster.py' 2022-08-28T20:07:33,148 adding 'scFates/tools/conversion.py' 2022-08-28T20:07:33,155 adding 'scFates/tools/correlation_tools.py' 2022-08-28T20:07:33,159 adding 'scFates/tools/covariate.py' 2022-08-28T20:07:33,165 adding 'scFates/tools/dendrogram.py' 2022-08-28T20:07:33,169 adding 'scFates/tools/fit.py' 2022-08-28T20:07:33,176 adding 'scFates/tools/graph_fitting.py' 2022-08-28T20:07:33,183 adding 'scFates/tools/graph_operations.py' 2022-08-28T20:07:33,187 adding 'scFates/tools/linearity_deviation.py' 2022-08-28T20:07:33,192 adding 'scFates/tools/pseudotime.py' 2022-08-28T20:07:33,196 adding 'scFates/tools/root.py' 2022-08-28T20:07:33,201 adding 'scFates/tools/slide_cors.py' 2022-08-28T20:07:33,206 adding 'scFates/tools/test_association.py' 2022-08-28T20:07:33,209 adding 'scFates/tools/utils.py' 2022-08-28T20:07:33,214 adding 'scFates-0.9.1.dist-info/LICENSE' 2022-08-28T20:07:33,217 adding 'scFates-0.9.1.dist-info/METADATA' 2022-08-28T20:07:33,219 adding 'scFates-0.9.1.dist-info/WHEEL' 2022-08-28T20:07:33,220 adding 'scFates-0.9.1.dist-info/top_level.txt' 2022-08-28T20:07:33,223 adding 'scFates-0.9.1.dist-info/RECORD' 2022-08-28T20:07:33,231 removing build/bdist.linux-armv7l/wheel 2022-08-28T20:07:33,543 Building wheel for scfates (pyproject.toml): finished with status 'done' 2022-08-28T20:07:33,563 Created wheel for scfates: filename=scFates-0.9.1-py3-none-any.whl size=115159 sha256=96d9dcc6aee61246c70f57774cf1f57162387d666107d964900dfe13c00f9022 2022-08-28T20:07:33,566 Stored in directory: /tmp/pip-ephem-wheel-cache-2ng9zzbw/wheels/8d/21/94/cb01f6206a5b614b5153b297f29b6224a1400830131ec51d22 2022-08-28T20:07:33,594 Successfully built scfates 2022-08-28T20:07:33,610 Removed build tracker: '/tmp/pip-build-tracker-mlciw4kh'