2022-08-29T06:25:43,312 Created temporary directory: /tmp/pip-ephem-wheel-cache-xo9y3d87 2022-08-29T06:25:43,318 Created temporary directory: /tmp/pip-build-tracker-9yo4r23r 2022-08-29T06:25:43,319 Initialized build tracking at /tmp/pip-build-tracker-9yo4r23r 2022-08-29T06:25:43,319 Created build tracker: /tmp/pip-build-tracker-9yo4r23r 2022-08-29T06:25:43,319 Entered build tracker: /tmp/pip-build-tracker-9yo4r23r 2022-08-29T06:25:43,320 Created temporary directory: /tmp/pip-wheel-vv1lrvsq 2022-08-29T06:25:43,390 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-29T06:25:43,398 2 location(s) to search for versions of sigprofilerassignment: 2022-08-29T06:25:43,398 * https://pypi.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,398 * https://www.piwheels.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,399 Fetching project page and analyzing links: https://pypi.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,400 Getting page https://pypi.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,404 Found index url https://pypi.org/simple 2022-08-29T06:25:43,615 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/eb/80/f1205274c434ee073d26adb94743b425d82a6fbbb3d5445454139f8e095e/SigProfilerAssignment-0.0.2-py3-none-any.whl#sha256=141f2bfd742258df8931fa66a2886a7885c7ef75b7b40c556bc1e24f61c1711a (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,615 Found link https://files.pythonhosted.org/packages/cd/7f/d5949b0e1a6099a309d6c3cf5e7da3eecc22fdab13d7fbccf91fc5455bbc/SigProfilerAssignment-0.0.2.tar.gz#sha256=566abc2759da994500316c98318750133d3df81713c58a633afd671437d928bf (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.2 2022-08-29T06:25:43,616 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/d4/0a/3ec44d6d52bb12aeed9b8190f3c556bf85bacdf54f26d8458eb80b184219/SigProfilerAssignment-0.0.3-py3-none-any.whl#sha256=176c153def37486569be43f8461f340983636d2fcdd72a13675b5b57b38d0e48 (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,617 Found link https://files.pythonhosted.org/packages/bc/57/ce6cc7421edcd9dbc25fd065ada3876b40244852290c9cf852e6dd3e2180/SigProfilerAssignment-0.0.3.tar.gz#sha256=41c13bc373dab367c25f7915aba42e6ea02389062e676fcf3ea9f8854044b396 (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.3 2022-08-29T06:25:43,618 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/76/13/620a464927e43c92d18e9949938f6b41b14d7111cded624096a02d9b81cc/SigProfilerAssignment-0.0.4-py3-none-any.whl#sha256=fc5e8bcb0280adf95824e24f446bf17140c83fca666011ac7f048ac0c1c31e65 (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,618 Found link https://files.pythonhosted.org/packages/8f/9e/8b7673ac9751acd9f82716b4299c155c2152bc26e32925bd5463d9c70800/SigProfilerAssignment-0.0.4.tar.gz#sha256=2625642379b2efea17031e091ff7f2f08549af03fc293e841f5c6a04ba34cf31 (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.4 2022-08-29T06:25:43,619 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/9d/56/1968aaf35ec8597df716ebb6c5cbca6a61892f8a293150f312985a500231/SigProfilerAssignment-0.0.5-py3-none-any.whl#sha256=f561bd7629702da4ac8646e561886ca546389296fbc37e78fc88285be7aec767 (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,620 Found link https://files.pythonhosted.org/packages/79/c4/ed14da5d80f43e136c7638db1341dda950f510b9e283f3233a8aa7aabf32/SigProfilerAssignment-0.0.5.tar.gz#sha256=239afb0e763394c34e96cb7126e82704e2cde831992e641b3188bec341cd6cef (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.5 2022-08-29T06:25:43,620 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/66/ab/85f6ffb88701a726aa49666e007b52dbd3de21f036a6b8c2ebdeb9f1e462/SigProfilerAssignment-0.0.6-py3-none-any.whl#sha256=454159d43d895b745b66125f80584c6ad8a15e22f1299f372da50a52e80192bf (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,621 Found link https://files.pythonhosted.org/packages/03/d8/b24045855eff43a91cf7756c96f110b790d103bd1df87f05c0986da04d0b/SigProfilerAssignment-0.0.6.tar.gz#sha256=0e7b54750127b9c00a90353c3abfc740193543ed124f7a26d40b25915acd0aaa (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.6 2022-08-29T06:25:43,622 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/7c/81/57fe9bf47f15fb98781753a9cd3b3614f09d5c53e359bde0b62d8ecc25eb/SigProfilerAssignment-0.0.7-py3-none-any.whl#sha256=b5be5cba42a3e350ea81d9c6f94671467810b6b113d165bedca153c1c4b19cfc (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,622 Found link https://files.pythonhosted.org/packages/50/e5/0606e29d66a591712f8e43b9d2550f9d3c8a7c23b2720149f80424219418/SigProfilerAssignment-0.0.7.tar.gz#sha256=3866a0c871bb9b39184568336d7cc338a82e55f900b4ba2fb645a6487ee4045c (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.7 2022-08-29T06:25:43,623 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/b5/e6/bf7281f0f954a6108054031ca43038d77c11074c97615710dfe0d6153edb/SigProfilerAssignment-0.0.8-py3-none-any.whl#sha256=8925b5647e80a32fdef877b6065d929a97ab348b7cbaaec502262ee2a5b2c8aa (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,624 Found link https://files.pythonhosted.org/packages/dd/2f/b1f51b32baa819c71f8f872cf621fa6a3b60c7bb151f19b2afee6acf89a2/SigProfilerAssignment-0.0.8.tar.gz#sha256=cdc6962e00396fedb153e494af491afb7d3e2412f499c23cc27299648eb7f96f (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.8 2022-08-29T06:25:43,624 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/8d/ce/b3007d83ebaad0c5f16d68fc825dcce815d70081f135a950caf8b6a21972/SigProfilerAssignment-0.0.9-py3-none-any.whl#sha256=183b47c2cebea18f7f736768a7d50cd7ee766d869e179b025ef6ca6c68c1455e (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,625 Found link https://files.pythonhosted.org/packages/5e/3a/5f620dd06f38b080d13d9c07487b1f927908e895c6d0078fd31e1774d819/SigProfilerAssignment-0.0.9.tar.gz#sha256=a5b2f6a7a7ad0123d85a60373167f02c77bcc58977d99c38e99e2d37926f6b41 (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.9 2022-08-29T06:25:43,626 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/37/7a/96090afea439df630b92520cef7d519d8acda4727d2d36f54cd4e8f734b6/SigProfilerAssignment-0.0.10-py3-none-any.whl#sha256=70ea2d01d6cd6c855e852cc98a94fe561ec06f256b54f32edc9ecc8f531f51fb (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,626 Found link https://files.pythonhosted.org/packages/ef/e2/fb950814a244e3783cd12bba4337ead95882b7adbf8b6100faae9281d8e8/SigProfilerAssignment-0.0.10.tar.gz#sha256=1bebcfe15af21bc5018b73e3a33c8ed9d8d16337dc8ea47c30f5e429b48d3d3f (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.10 2022-08-29T06:25:43,627 Skipping link: No binaries permitted for sigprofilerassignment: https://files.pythonhosted.org/packages/98/65/b438b8c59fd28a2b6fe3a8650439d5e4dd12c376f0edddf22f20552920e5/SigProfilerAssignment-0.0.11-py3-none-any.whl#sha256=69c22ca49e7af095b0b2662f287867392078a691d3cec2ed219d906bb48a15ca (from https://pypi.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,627 Found link https://files.pythonhosted.org/packages/ad/66/15131e6cc8d00269785242b03348f6b514425db74595f95906dad17abd9c/SigProfilerAssignment-0.0.11.tar.gz#sha256=05a3a26bbd366d0b8eec8767cd7b84af83ab8c254e9adfc629b94bc560f6cb83 (from https://pypi.org/simple/sigprofilerassignment/), version: 0.0.11 2022-08-29T06:25:43,628 Fetching project page and analyzing links: https://www.piwheels.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,629 Getting page https://www.piwheels.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,631 Found index url https://www.piwheels.org/simple 2022-08-29T06:25:43,838 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.10-py3-none-any.whl#sha256=f5083ed4028fafdeb7af1ba973a6cb22db5afd86d9dd2c752df7120eb4dcd195 (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,839 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.9-py3-none-any.whl#sha256=03dd4968c3c9217d18cb33408e92f87305ef617bbb4887f8524dd596c943dec4 (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,839 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.8-py3-none-any.whl#sha256=3f5230a1c23cb6df61406f2401c9d4fea5d655bb7f5799b37bb02288aab2e6d5 (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,840 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.7-py3-none-any.whl#sha256=6db83fcf7669f563330e9c8b69ef89320b6bee775bb5b7c13f6fa480b75c6c6e (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,840 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.6-py3-none-any.whl#sha256=3c24df444dbc2dca805d2ad2027411960b6c5d16edef5752b8cce431600f7bd4 (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,841 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.5-py3-none-any.whl#sha256=8dcda60a710617760d56dff2ae80b5a534397648f276af1399674bad57c9fb12 (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,841 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.4-py3-none-any.whl#sha256=dfd3c27005fbbcd5ec1c7991f5b1e8904b2ce17d5bdd55291c2ea9132a6eadbe (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,842 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.3-py3-none-any.whl#sha256=8b18bba4e61a6040884d0cddd9c4547a5bfe85135968d4416016dccc5d165d28 (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,842 Skipping link: No binaries permitted for sigprofilerassignment: https://www.piwheels.org/simple/sigprofilerassignment/SigProfilerAssignment-0.0.2-py3-none-any.whl#sha256=6b7c937475ced548e412ca91f1beb750ce7d02abc32ad0a1e1d985353c562bae (from https://www.piwheels.org/simple/sigprofilerassignment/) 2022-08-29T06:25:43,843 Skipping link: not a file: https://www.piwheels.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,843 Skipping link: not a file: https://pypi.org/simple/sigprofilerassignment/ 2022-08-29T06:25:43,881 Given no hashes to check 1 links for project 'sigprofilerassignment': discarding no candidates 2022-08-29T06:25:43,912 Collecting sigprofilerassignment==0.0.11 2022-08-29T06:25:43,917 Created temporary directory: /tmp/pip-unpack-crqpkmj0 2022-08-29T06:25:45,181 Downloading SigProfilerAssignment-0.0.11.tar.gz (5.3 MB) 2022-08-29T06:25:48,787 Added sigprofilerassignment==0.0.11 from https://files.pythonhosted.org/packages/ad/66/15131e6cc8d00269785242b03348f6b514425db74595f95906dad17abd9c/SigProfilerAssignment-0.0.11.tar.gz#sha256=05a3a26bbd366d0b8eec8767cd7b84af83ab8c254e9adfc629b94bc560f6cb83 to build tracker '/tmp/pip-build-tracker-9yo4r23r' 2022-08-29T06:25:48,790 Running setup.py (path:/tmp/pip-wheel-vv1lrvsq/sigprofilerassignment_aad5c95a0ea144e6a9a620ce65debc3c/setup.py) egg_info for package sigprofilerassignment 2022-08-29T06:25:48,791 Created temporary directory: /tmp/pip-pip-egg-info-hrc7kmrf 2022-08-29T06:25:48,792 Preparing metadata (setup.py): started 2022-08-29T06:25:48,794 Running command python setup.py egg_info 2022-08-29T06:25:57,210 running egg_info 2022-08-29T06:25:57,214 creating /tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info 2022-08-29T06:25:57,955 writing /tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/PKG-INFO 2022-08-29T06:25:58,557 writing dependency_links to /tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/dependency_links.txt 2022-08-29T06:26:01,543 writing requirements to /tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/requires.txt 2022-08-29T06:26:02,144 writing top-level names to /tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/top_level.txt 2022-08-29T06:26:02,146 writing manifest file '/tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/SOURCES.txt' 2022-08-29T06:26:03,179 reading manifest file '/tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/SOURCES.txt' 2022-08-29T06:26:03,182 reading manifest template 'MANIFEST.in' 2022-08-29T06:26:03,214 adding license file 'LICENSE.txt' 2022-08-29T06:26:03,234 writing manifest file '/tmp/pip-pip-egg-info-hrc7kmrf/SigProfilerAssignment.egg-info/SOURCES.txt' 2022-08-29T06:26:03,453 Preparing metadata (setup.py): finished with status 'done' 2022-08-29T06:26:03,464 Source in /tmp/pip-wheel-vv1lrvsq/sigprofilerassignment_aad5c95a0ea144e6a9a620ce65debc3c has version 0.0.11, which satisfies requirement sigprofilerassignment==0.0.11 from https://files.pythonhosted.org/packages/ad/66/15131e6cc8d00269785242b03348f6b514425db74595f95906dad17abd9c/SigProfilerAssignment-0.0.11.tar.gz#sha256=05a3a26bbd366d0b8eec8767cd7b84af83ab8c254e9adfc629b94bc560f6cb83 2022-08-29T06:26:03,466 Removed sigprofilerassignment==0.0.11 from https://files.pythonhosted.org/packages/ad/66/15131e6cc8d00269785242b03348f6b514425db74595f95906dad17abd9c/SigProfilerAssignment-0.0.11.tar.gz#sha256=05a3a26bbd366d0b8eec8767cd7b84af83ab8c254e9adfc629b94bc560f6cb83 from build tracker '/tmp/pip-build-tracker-9yo4r23r' 2022-08-29T06:26:03,476 Created temporary directory: /tmp/pip-unpack-1dxxywl7 2022-08-29T06:26:03,477 Building wheels for collected packages: sigprofilerassignment 2022-08-29T06:26:03,486 Created temporary directory: /tmp/pip-wheel-hf6xk584 2022-08-29T06:26:03,487 Building wheel for sigprofilerassignment (setup.py): started 2022-08-29T06:26:03,489 Destination directory: /tmp/pip-wheel-hf6xk584 2022-08-29T06:26:03,489 Running command python setup.py bdist_wheel 2022-08-29T06:26:11,284 running bdist_wheel 2022-08-29T06:26:11,716 running build 2022-08-29T06:26:11,717 running build_py 2022-08-29T06:26:12,456 creating build 2022-08-29T06:26:12,457 creating build/lib 2022-08-29T06:26:12,458 creating build/lib/SigProfilerAssignment 2022-08-29T06:26:12,461 copying SigProfilerAssignment/decomposition.py -> build/lib/SigProfilerAssignment 2022-08-29T06:26:12,467 copying SigProfilerAssignment/__init__.py -> build/lib/SigProfilerAssignment 2022-08-29T06:26:12,470 copying SigProfilerAssignment/version.py -> build/lib/SigProfilerAssignment 2022-08-29T06:26:12,474 copying SigProfilerAssignment/decompose_sub_routines.py -> build/lib/SigProfilerAssignment 2022-08-29T06:26:12,480 copying SigProfilerAssignment/Analyzer.py -> build/lib/SigProfilerAssignment 2022-08-29T06:26:12,484 copying SigProfilerAssignment/single_sample.py -> build/lib/SigProfilerAssignment 2022-08-29T06:26:12,489 running egg_info 2022-08-29T06:26:14,007 writing SigProfilerAssignment.egg-info/PKG-INFO 2022-08-29T06:26:14,607 writing dependency_links to SigProfilerAssignment.egg-info/dependency_links.txt 2022-08-29T06:26:17,589 writing requirements to SigProfilerAssignment.egg-info/requires.txt 2022-08-29T06:26:18,186 writing top-level names to SigProfilerAssignment.egg-info/top_level.txt 2022-08-29T06:26:18,339 reading manifest file 'SigProfilerAssignment.egg-info/SOURCES.txt' 2022-08-29T06:26:18,403 reading manifest template 'MANIFEST.in' 2022-08-29T06:26:18,426 adding license file 'LICENSE.txt' 2022-08-29T06:26:18,455 writing manifest file 'SigProfilerAssignment.egg-info/SOURCES.txt' 2022-08-29T06:26:18,460 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,461 ############################ 2022-08-29T06:26:18,462 # Package would be ignored # 2022-08-29T06:26:18,462 ############################ 2022-08-29T06:26:18,462 Python recognizes 'SigProfilerAssignment.data' as an importable package, however it is 2022-08-29T06:26:18,463 included in the distribution as "data". 2022-08-29T06:26:18,463 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,463 therefore is considered deprecated). 2022-08-29T06:26:18,464 Please make sure that 'SigProfilerAssignment.data' is included as a package by using 2022-08-29T06:26:18,464 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,465 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,465 documentation page. 2022-08-29T06:26:18,466 !! 2022-08-29T06:26:18,466 check.warn(importable) 2022-08-29T06:26:18,467 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,468 ############################ 2022-08-29T06:26:18,468 # Package would be ignored # 2022-08-29T06:26:18,468 ############################ 2022-08-29T06:26:18,469 Python recognizes 'SigProfilerAssignment.data.Reference_Signatures.GRCh37' as an importable package, however it is 2022-08-29T06:26:18,469 included in the distribution as "data". 2022-08-29T06:26:18,469 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,470 therefore is considered deprecated). 2022-08-29T06:26:18,470 Please make sure that 'SigProfilerAssignment.data.Reference_Signatures.GRCh37' is included as a package by using 2022-08-29T06:26:18,471 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,471 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,471 documentation page. 2022-08-29T06:26:18,472 !! 2022-08-29T06:26:18,473 check.warn(importable) 2022-08-29T06:26:18,473 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,474 ############################ 2022-08-29T06:26:18,474 # Package would be ignored # 2022-08-29T06:26:18,475 ############################ 2022-08-29T06:26:18,475 Python recognizes 'SigProfilerAssignment.data.Reference_Signatures.GRCh38' as an importable package, however it is 2022-08-29T06:26:18,475 included in the distribution as "data". 2022-08-29T06:26:18,476 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,476 therefore is considered deprecated). 2022-08-29T06:26:18,476 Please make sure that 'SigProfilerAssignment.data.Reference_Signatures.GRCh38' is included as a package by using 2022-08-29T06:26:18,477 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,477 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,478 documentation page. 2022-08-29T06:26:18,479 !! 2022-08-29T06:26:18,479 check.warn(importable) 2022-08-29T06:26:18,480 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,481 ############################ 2022-08-29T06:26:18,481 # Package would be ignored # 2022-08-29T06:26:18,481 ############################ 2022-08-29T06:26:18,481 Python recognizes 'SigProfilerAssignment.data.Reference_Signatures.mm10' as an importable package, however it is 2022-08-29T06:26:18,482 included in the distribution as "data". 2022-08-29T06:26:18,482 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,482 therefore is considered deprecated). 2022-08-29T06:26:18,483 Please make sure that 'SigProfilerAssignment.data.Reference_Signatures.mm10' is included as a package by using 2022-08-29T06:26:18,483 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,484 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,484 documentation page. 2022-08-29T06:26:18,485 !! 2022-08-29T06:26:18,485 check.warn(importable) 2022-08-29T06:26:18,486 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,487 ############################ 2022-08-29T06:26:18,487 # Package would be ignored # 2022-08-29T06:26:18,487 ############################ 2022-08-29T06:26:18,488 Python recognizes 'SigProfilerAssignment.data.Reference_Signatures.mm9' as an importable package, however it is 2022-08-29T06:26:18,488 included in the distribution as "data". 2022-08-29T06:26:18,488 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,489 therefore is considered deprecated). 2022-08-29T06:26:18,489 Please make sure that 'SigProfilerAssignment.data.Reference_Signatures.mm9' is included as a package by using 2022-08-29T06:26:18,490 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,490 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,490 documentation page. 2022-08-29T06:26:18,491 !! 2022-08-29T06:26:18,492 check.warn(importable) 2022-08-29T06:26:18,492 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,493 ############################ 2022-08-29T06:26:18,493 # Package would be ignored # 2022-08-29T06:26:18,494 ############################ 2022-08-29T06:26:18,494 Python recognizes 'SigProfilerAssignment.data.Reference_Signatures.rn6' as an importable package, however it is 2022-08-29T06:26:18,494 included in the distribution as "data". 2022-08-29T06:26:18,494 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,495 therefore is considered deprecated). 2022-08-29T06:26:18,495 Please make sure that 'SigProfilerAssignment.data.Reference_Signatures.rn6' is included as a package by using 2022-08-29T06:26:18,496 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,496 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,496 documentation page. 2022-08-29T06:26:18,497 !! 2022-08-29T06:26:18,498 check.warn(importable) 2022-08-29T06:26:18,498 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,499 ############################ 2022-08-29T06:26:18,500 # Package would be ignored # 2022-08-29T06:26:18,500 ############################ 2022-08-29T06:26:18,500 Python recognizes 'SigProfilerAssignment.data.vcftest' as an importable package, however it is 2022-08-29T06:26:18,501 included in the distribution as "data". 2022-08-29T06:26:18,501 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,501 therefore is considered deprecated). 2022-08-29T06:26:18,502 Please make sure that 'SigProfilerAssignment.data.vcftest' is included as a package by using 2022-08-29T06:26:18,502 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,502 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,503 documentation page. 2022-08-29T06:26:18,504 !! 2022-08-29T06:26:18,504 check.warn(importable) 2022-08-29T06:26:18,505 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,505 ############################ 2022-08-29T06:26:18,506 # Package would be ignored # 2022-08-29T06:26:18,506 ############################ 2022-08-29T06:26:18,506 Python recognizes 'SigProfilerAssignment.src' as an importable package, however it is 2022-08-29T06:26:18,507 included in the distribution as "data". 2022-08-29T06:26:18,507 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,507 therefore is considered deprecated). 2022-08-29T06:26:18,508 Please make sure that 'SigProfilerAssignment.src' is included as a package by using 2022-08-29T06:26:18,508 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,509 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,509 documentation page. 2022-08-29T06:26:18,510 !! 2022-08-29T06:26:18,510 check.warn(importable) 2022-08-29T06:26:18,511 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,511 ############################ 2022-08-29T06:26:18,512 # Package would be ignored # 2022-08-29T06:26:18,512 ############################ 2022-08-29T06:26:18,512 Python recognizes 'SigProfilerAssignment.src.Fonts' as an importable package, however it is 2022-08-29T06:26:18,513 included in the distribution as "data". 2022-08-29T06:26:18,513 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,513 therefore is considered deprecated). 2022-08-29T06:26:18,514 Please make sure that 'SigProfilerAssignment.src.Fonts' is included as a package by using 2022-08-29T06:26:18,514 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,515 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,515 documentation page. 2022-08-29T06:26:18,516 !! 2022-08-29T06:26:18,516 check.warn(importable) 2022-08-29T06:26:18,517 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-08-29T06:26:18,517 ############################ 2022-08-29T06:26:18,518 # Package would be ignored # 2022-08-29T06:26:18,518 ############################ 2022-08-29T06:26:18,518 Python recognizes 'SigProfilerAssignment.src.FormatFiles' as an importable package, however it is 2022-08-29T06:26:18,519 included in the distribution as "data". 2022-08-29T06:26:18,519 This behavior is likely to change in future versions of setuptools (and 2022-08-29T06:26:18,519 therefore is considered deprecated). 2022-08-29T06:26:18,520 Please make sure that 'SigProfilerAssignment.src.FormatFiles' is included as a package by using 2022-08-29T06:26:18,520 setuptools' `packages` configuration field or the proper discovery methods. 2022-08-29T06:26:18,521 You can read more about "package discovery" and "data files" on setuptools 2022-08-29T06:26:18,521 documentation page. 2022-08-29T06:26:18,522 !! 2022-08-29T06:26:18,522 check.warn(importable) 2022-08-29T06:26:18,525 creating build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,526 copying SigProfilerAssignment/data/21_breast_WGS_substitutions.mat -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,531 copying SigProfilerAssignment/data/Accolade_fermante.png -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,536 copying SigProfilerAssignment/data/CNV_features.tsv -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,541 copying SigProfilerAssignment/data/CNV_signatures.txt -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,546 copying SigProfilerAssignment/data/CN_classes_dictionary.txt -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,550 copying SigProfilerAssignment/data/DBS_signatures_genome_builds.xlsx -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,560 copying SigProfilerAssignment/data/SBS_signatures_genome_builds.xlsx -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,802 copying SigProfilerAssignment/data/Samples.txt -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,807 copying SigProfilerAssignment/data/csvexample.csv -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,811 copying SigProfilerAssignment/data/sigProfiler_DBS_signatures.csv -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,816 copying SigProfilerAssignment/data/sigProfiler_ID_signatures.csv -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,822 copying SigProfilerAssignment/data/sigProfiler_SBS_signatures_2018_03_28.csv -> build/lib/SigProfilerAssignment/data 2022-08-29T06:26:18,830 creating build/lib/SigProfilerAssignment/data/Reference_Signatures 2022-08-29T06:26:18,831 creating build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,833 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v1_SBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,839 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v1_SBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,846 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v2_SBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,852 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v2_SBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,859 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_DBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,864 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_DBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,870 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_ID_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,876 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_SBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,888 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_SBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,900 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_DBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,905 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_DBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,910 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_ID_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,917 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS288_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,928 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,941 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,953 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_CN_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,958 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_DBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,964 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_DBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,969 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_ID_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,975 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_SBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:18,988 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_SBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:19,000 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_DBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:19,005 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_DBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:19,011 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_ID_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:19,017 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_SBS_GRCh37.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:19,030 copying SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_SBS_GRCh37_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:19,043 creating build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,045 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v1_SBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,053 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v1_SBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,061 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v2_SBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,069 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v2_SBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,078 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_DBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,084 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_DBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,091 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_SBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,104 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_SBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,116 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_DBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,121 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_DBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,126 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_SBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,138 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_SBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,151 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_DBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,156 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_DBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,162 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_SBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,175 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_SBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,187 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_DBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,193 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_DBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,197 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_SBS_GRCh38.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,208 copying SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_SBS_GRCh38_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:19,219 creating build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,220 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v1_SBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,229 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v1_SBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,236 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v2_SBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,243 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v2_SBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,251 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_DBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,256 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_DBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,262 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_SBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,274 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_SBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,286 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_DBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,291 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_DBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,296 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_SBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,309 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_SBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,320 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_DBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,325 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_DBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,331 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_SBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,343 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_SBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,355 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_DBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,361 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_DBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,366 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_SBS_mm10.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,377 copying SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_SBS_mm10_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:19,388 creating build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,390 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v1_SBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,396 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v1_SBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,403 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v2_SBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,409 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v2_SBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,416 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_DBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,422 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_DBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,427 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_SBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,439 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_SBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,450 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_DBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,455 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_DBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,460 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_SBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,472 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_SBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,484 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_DBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,489 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_DBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,495 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_SBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,507 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_SBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,520 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_DBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,526 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_DBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,532 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_SBS_mm9.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,546 copying SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_SBS_mm9_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:19,558 creating build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,560 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v1_SBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,566 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v1_SBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,573 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v2_SBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,580 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v2_SBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,588 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_DBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,594 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_DBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,600 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_SBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,611 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_SBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,622 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_DBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,628 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_DBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,634 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_SBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,647 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_SBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,660 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_DBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,666 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_DBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,671 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_SBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,683 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_SBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,696 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_DBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,701 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_DBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,706 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_SBS_rn6.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,718 copying SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_SBS_rn6_exome.txt -> build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:19,730 creating build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,732 copying SigProfilerAssignment/data/vcftest/PD3851a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,740 copying SigProfilerAssignment/data/vcftest/PD3890a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,753 copying SigProfilerAssignment/data/vcftest/PD3904a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,763 copying SigProfilerAssignment/data/vcftest/PD3905a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,774 copying SigProfilerAssignment/data/vcftest/PD3945a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,791 copying SigProfilerAssignment/data/vcftest/PD4005a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,803 copying SigProfilerAssignment/data/vcftest/PD4006a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,823 copying SigProfilerAssignment/data/vcftest/PD4085a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,832 copying SigProfilerAssignment/data/vcftest/PD4086a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,840 copying SigProfilerAssignment/data/vcftest/PD4088a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,847 copying SigProfilerAssignment/data/vcftest/PD4103a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,859 copying SigProfilerAssignment/data/vcftest/PD4107a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,874 copying SigProfilerAssignment/data/vcftest/PD4109a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,890 copying SigProfilerAssignment/data/vcftest/PD4115a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,907 copying SigProfilerAssignment/data/vcftest/PD4116a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:19,921 copying SigProfilerAssignment/data/vcftest/PD4120a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:20,008 copying SigProfilerAssignment/data/vcftest/PD4192a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:20,018 copying SigProfilerAssignment/data/vcftest/PD4194a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:20,024 copying SigProfilerAssignment/data/vcftest/PD4198a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:20,036 copying SigProfilerAssignment/data/vcftest/PD4199a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:20,049 copying SigProfilerAssignment/data/vcftest/PD4248a.vcf -> build/lib/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:20,057 creating build/lib/SigProfilerAssignment/src 2022-08-29T06:26:20,059 copying SigProfilerAssignment/src/Accolade_fermante.png -> build/lib/SigProfilerAssignment/src 2022-08-29T06:26:20,064 copying SigProfilerAssignment/src/CREDIT.md -> build/lib/SigProfilerAssignment/src 2022-08-29T06:26:20,068 creating build/lib/SigProfilerAssignment/src/Fonts 2022-08-29T06:26:20,069 copying SigProfilerAssignment/src/Fonts/Arial Bold.ttf -> build/lib/SigProfilerAssignment/src/Fonts 2022-08-29T06:26:20,104 creating build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,105 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS1248.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,110 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS186.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,114 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS2976.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,120 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS78.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,124 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.ID28.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,128 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.ID415.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,133 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.ID83.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,137 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS1536.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,142 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS24.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,147 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS384.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,152 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS6.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,156 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS6144.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,165 copying SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS96.all -> build/lib/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:20,922 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-08-29T06:26:20,923 setuptools.SetuptoolsDeprecationWarning, 2022-08-29T06:26:21,670 installing to build/bdist.linux-armv7l/wheel 2022-08-29T06:26:21,670 running install 2022-08-29T06:26:21,730 running install_lib 2022-08-29T06:26:22,521 creating build/bdist.linux-armv7l 2022-08-29T06:26:22,522 creating build/bdist.linux-armv7l/wheel 2022-08-29T06:26:22,525 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,527 copying build/lib/SigProfilerAssignment/decomposition.py -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,534 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src 2022-08-29T06:26:22,536 copying build/lib/SigProfilerAssignment/src/Accolade_fermante.png -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src 2022-08-29T06:26:22,541 copying build/lib/SigProfilerAssignment/src/CREDIT.md -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src 2022-08-29T06:26:22,545 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/Fonts 2022-08-29T06:26:22,547 copying build/lib/SigProfilerAssignment/src/Fonts/Arial Bold.ttf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/Fonts 2022-08-29T06:26:22,591 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,593 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS2976.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,599 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS6.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,603 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS6144.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,611 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS384.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,615 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS1536.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,621 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.ID83.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,624 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS78.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,627 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS96.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,631 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS24.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,634 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.ID415.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,638 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.ID28.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,641 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS186.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,645 copying build/lib/SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS1248.all -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/src/FormatFiles 2022-08-29T06:26:22,649 copying build/lib/SigProfilerAssignment/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,653 copying build/lib/SigProfilerAssignment/version.py -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,656 copying build/lib/SigProfilerAssignment/decompose_sub_routines.py -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,663 copying build/lib/SigProfilerAssignment/Analyzer.py -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,667 copying build/lib/SigProfilerAssignment/single_sample.py -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment 2022-08-29T06:26:22,674 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,675 copying build/lib/SigProfilerAssignment/data/Accolade_fermante.png -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,680 copying build/lib/SigProfilerAssignment/data/Samples.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,684 copying build/lib/SigProfilerAssignment/data/sigProfiler_ID_signatures.csv -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,688 copying build/lib/SigProfilerAssignment/data/CN_classes_dictionary.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,692 copying build/lib/SigProfilerAssignment/data/DBS_signatures_genome_builds.xlsx -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,702 copying build/lib/SigProfilerAssignment/data/sigProfiler_DBS_signatures.csv -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,706 copying build/lib/SigProfilerAssignment/data/sigProfiler_SBS_signatures_2018_03_28.csv -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:22,714 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures 2022-08-29T06:26:22,718 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,720 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_DBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,725 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_SBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,736 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_ID_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,741 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_ID_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,747 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_ID_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,752 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v1_SBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,757 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_SBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,768 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v2_SBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,774 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,785 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_DBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,790 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v1_SBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,795 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS288_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,806 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_ID_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,813 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_SBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,824 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_DBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,830 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_SBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,843 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_DBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,848 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_SBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,860 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v2_SBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,868 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,880 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_DBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,886 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_CN_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,892 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_DBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,897 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_SBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,910 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_DBS_GRCh37.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,915 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_DBS_GRCh37_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh37 2022-08-29T06:26:22,921 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,923 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_DBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,928 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v2_SBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,936 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v1_SBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,942 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_SBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,953 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v1_SBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,960 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_SBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,970 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_DBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,975 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_DBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,980 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_SBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,991 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_DBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:22,996 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_SBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,008 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_SBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,019 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_DBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,024 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_SBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,035 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v2_SBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,042 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_SBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,054 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_DBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,060 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_DBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,064 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_SBS_mm9_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,076 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_DBS_mm9.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm9 2022-08-29T06:26:23,082 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,084 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_SBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,095 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v2_SBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,102 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_DBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,107 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_DBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,113 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_DBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,118 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_SBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,130 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v1_SBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,136 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_SBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,147 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v1_SBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,153 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_DBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,158 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_DBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,163 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_DBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,168 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_SBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,179 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_SBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,190 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_SBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,201 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_SBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,211 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_DBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,215 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_DBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,220 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_SBS_rn6_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,230 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v2_SBS_rn6.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/rn6 2022-08-29T06:26:23,238 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,239 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_SBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,250 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_SBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,260 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v2_SBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,266 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_SBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,277 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_DBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,282 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_SBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,293 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_DBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,299 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_SBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,310 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_DBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,315 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_SBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,327 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_SBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,340 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_SBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,350 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_DBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,355 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_DBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,360 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_DBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,364 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v1_SBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,370 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_DBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,374 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v2_SBS_GRCh38_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,381 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_DBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,388 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v1_SBS_GRCh38.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/GRCh38 2022-08-29T06:26:23,396 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,398 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_DBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,404 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_DBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,410 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_SBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,422 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_SBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,433 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_SBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,445 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_SBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,458 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_SBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,470 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_DBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,475 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v2_SBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,483 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_DBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,488 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v1_SBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,495 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v2_SBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,502 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_SBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,514 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v1_SBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,520 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_SBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,532 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_DBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,537 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_DBS_mm10.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,541 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_SBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,552 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_DBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,556 copying build/lib/SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_DBS_mm10_exome.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/Reference_Signatures/mm10 2022-08-29T06:26:23,562 copying build/lib/SigProfilerAssignment/data/21_breast_WGS_substitutions.mat -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:23,565 copying build/lib/SigProfilerAssignment/data/SBS_signatures_genome_builds.xlsx -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:23,601 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,603 copying build/lib/SigProfilerAssignment/data/vcftest/PD3904a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,618 copying build/lib/SigProfilerAssignment/data/vcftest/PD3905a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,629 copying build/lib/SigProfilerAssignment/data/vcftest/PD4006a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,645 copying build/lib/SigProfilerAssignment/data/vcftest/PD4107a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,662 copying build/lib/SigProfilerAssignment/data/vcftest/PD4086a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,669 copying build/lib/SigProfilerAssignment/data/vcftest/PD4198a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,678 copying build/lib/SigProfilerAssignment/data/vcftest/PD4194a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,684 copying build/lib/SigProfilerAssignment/data/vcftest/PD4088a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,691 copying build/lib/SigProfilerAssignment/data/vcftest/PD4116a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,705 copying build/lib/SigProfilerAssignment/data/vcftest/PD4085a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,712 copying build/lib/SigProfilerAssignment/data/vcftest/PD4248a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,719 copying build/lib/SigProfilerAssignment/data/vcftest/PD4192a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,728 copying build/lib/SigProfilerAssignment/data/vcftest/PD3851a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,734 copying build/lib/SigProfilerAssignment/data/vcftest/PD4109a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,749 copying build/lib/SigProfilerAssignment/data/vcftest/PD3945a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,768 copying build/lib/SigProfilerAssignment/data/vcftest/PD4115a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,786 copying build/lib/SigProfilerAssignment/data/vcftest/PD4120a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,866 copying build/lib/SigProfilerAssignment/data/vcftest/PD4005a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,876 copying build/lib/SigProfilerAssignment/data/vcftest/PD4199a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,889 copying build/lib/SigProfilerAssignment/data/vcftest/PD4103a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,900 copying build/lib/SigProfilerAssignment/data/vcftest/PD3890a.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data/vcftest 2022-08-29T06:26:23,912 copying build/lib/SigProfilerAssignment/data/CNV_features.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:23,915 copying build/lib/SigProfilerAssignment/data/csvexample.csv -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:23,919 copying build/lib/SigProfilerAssignment/data/CNV_signatures.txt -> build/bdist.linux-armv7l/wheel/SigProfilerAssignment/data 2022-08-29T06:26:23,923 running install_egg_info 2022-08-29T06:26:24,675 Copying SigProfilerAssignment.egg-info to build/bdist.linux-armv7l/wheel/SigProfilerAssignment-0.0.11-py3.7.egg-info 2022-08-29T06:26:24,704 running install_scripts 2022-08-29T06:26:24,885 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2022-08-29T06:26:24,894 creating build/bdist.linux-armv7l/wheel/SigProfilerAssignment-0.0.11.dist-info/WHEEL 2022-08-29T06:26:24,899 creating '/tmp/pip-wheel-hf6xk584/SigProfilerAssignment-0.0.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-29T06:26:24,904 adding 'SigProfilerAssignment/Analyzer.py' 2022-08-29T06:26:24,906 adding 'SigProfilerAssignment/__init__.py' 2022-08-29T06:26:24,918 adding 'SigProfilerAssignment/decompose_sub_routines.py' 2022-08-29T06:26:24,925 adding 'SigProfilerAssignment/decomposition.py' 2022-08-29T06:26:24,934 adding 'SigProfilerAssignment/single_sample.py' 2022-08-29T06:26:24,937 adding 'SigProfilerAssignment/version.py' 2022-08-29T06:26:24,941 adding 'SigProfilerAssignment/data/21_breast_WGS_substitutions.mat' 2022-08-29T06:26:24,945 adding 'SigProfilerAssignment/data/Accolade_fermante.png' 2022-08-29T06:26:24,947 adding 'SigProfilerAssignment/data/CNV_features.tsv' 2022-08-29T06:26:24,954 adding 'SigProfilerAssignment/data/CNV_signatures.txt' 2022-08-29T06:26:24,957 adding 'SigProfilerAssignment/data/CN_classes_dictionary.txt' 2022-08-29T06:26:24,994 adding 'SigProfilerAssignment/data/DBS_signatures_genome_builds.xlsx' 2022-08-29T06:26:25,102 adding 'SigProfilerAssignment/data/SBS_signatures_genome_builds.xlsx' 2022-08-29T06:26:25,114 adding 'SigProfilerAssignment/data/Samples.txt' 2022-08-29T06:26:25,117 adding 'SigProfilerAssignment/data/csvexample.csv' 2022-08-29T06:26:25,123 adding 'SigProfilerAssignment/data/sigProfiler_DBS_signatures.csv' 2022-08-29T06:26:25,130 adding 'SigProfilerAssignment/data/sigProfiler_ID_signatures.csv' 2022-08-29T06:26:25,164 adding 'SigProfilerAssignment/data/sigProfiler_SBS_signatures_2018_03_28.csv' 2022-08-29T06:26:25,177 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v1_SBS_GRCh37.txt' 2022-08-29T06:26:25,198 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v1_SBS_GRCh37_exome.txt' 2022-08-29T06:26:25,219 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v2_SBS_GRCh37.txt' 2022-08-29T06:26:25,250 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v2_SBS_GRCh37_exome.txt' 2022-08-29T06:26:25,258 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_DBS_GRCh37.txt' 2022-08-29T06:26:25,266 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_DBS_GRCh37_exome.txt' 2022-08-29T06:26:25,280 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_ID_GRCh37.txt' 2022-08-29T06:26:25,365 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_SBS_GRCh37.txt' 2022-08-29T06:26:25,453 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.1_SBS_GRCh37_exome.txt' 2022-08-29T06:26:25,463 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_DBS_GRCh37.txt' 2022-08-29T06:26:25,471 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_DBS_GRCh37_exome.txt' 2022-08-29T06:26:25,486 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_ID_GRCh37.txt' 2022-08-29T06:26:25,539 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS288_GRCh37.txt' 2022-08-29T06:26:25,633 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS_GRCh37.txt' 2022-08-29T06:26:25,729 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.2_SBS_GRCh37_exome.txt' 2022-08-29T06:26:25,741 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_CN_GRCh37.txt' 2022-08-29T06:26:25,749 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_DBS_GRCh37.txt' 2022-08-29T06:26:25,757 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_DBS_GRCh37_exome.txt' 2022-08-29T06:26:25,772 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_ID_GRCh37.txt' 2022-08-29T06:26:25,864 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_SBS_GRCh37.txt' 2022-08-29T06:26:25,960 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3.3_SBS_GRCh37_exome.txt' 2022-08-29T06:26:25,971 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_DBS_GRCh37.txt' 2022-08-29T06:26:25,979 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_DBS_GRCh37_exome.txt' 2022-08-29T06:26:25,993 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_ID_GRCh37.txt' 2022-08-29T06:26:26,070 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_SBS_GRCh37.txt' 2022-08-29T06:26:26,151 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh37/COSMIC_v3_SBS_GRCh37_exome.txt' 2022-08-29T06:26:26,176 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v1_SBS_GRCh38.txt' 2022-08-29T06:26:26,198 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v1_SBS_GRCh38_exome.txt' 2022-08-29T06:26:26,231 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v2_SBS_GRCh38.txt' 2022-08-29T06:26:26,263 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v2_SBS_GRCh38_exome.txt' 2022-08-29T06:26:26,271 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_DBS_GRCh38.txt' 2022-08-29T06:26:26,279 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_DBS_GRCh38_exome.txt' 2022-08-29T06:26:26,364 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_SBS_GRCh38.txt' 2022-08-29T06:26:26,452 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.1_SBS_GRCh38_exome.txt' 2022-08-29T06:26:26,464 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_DBS_GRCh38.txt' 2022-08-29T06:26:26,472 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_DBS_GRCh38_exome.txt' 2022-08-29T06:26:26,565 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_SBS_GRCh38.txt' 2022-08-29T06:26:26,661 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.2_SBS_GRCh38_exome.txt' 2022-08-29T06:26:26,671 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_DBS_GRCh38.txt' 2022-08-29T06:26:26,679 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_DBS_GRCh38_exome.txt' 2022-08-29T06:26:26,772 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_SBS_GRCh38.txt' 2022-08-29T06:26:26,868 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3.3_SBS_GRCh38_exome.txt' 2022-08-29T06:26:26,879 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_DBS_GRCh38.txt' 2022-08-29T06:26:26,886 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_DBS_GRCh38_exome.txt' 2022-08-29T06:26:26,965 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_SBS_GRCh38.txt' 2022-08-29T06:26:27,046 adding 'SigProfilerAssignment/data/Reference_Signatures/GRCh38/COSMIC_v3_SBS_GRCh38_exome.txt' 2022-08-29T06:26:27,071 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v1_SBS_mm10.txt' 2022-08-29T06:26:27,093 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v1_SBS_mm10_exome.txt' 2022-08-29T06:26:27,124 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v2_SBS_mm10.txt' 2022-08-29T06:26:27,155 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v2_SBS_mm10_exome.txt' 2022-08-29T06:26:27,164 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_DBS_mm10.txt' 2022-08-29T06:26:27,172 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_DBS_mm10_exome.txt' 2022-08-29T06:26:27,257 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_SBS_mm10.txt' 2022-08-29T06:26:27,345 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.1_SBS_mm10_exome.txt' 2022-08-29T06:26:27,355 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_DBS_mm10.txt' 2022-08-29T06:26:27,363 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_DBS_mm10_exome.txt' 2022-08-29T06:26:27,456 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_SBS_mm10.txt' 2022-08-29T06:26:27,552 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.2_SBS_mm10_exome.txt' 2022-08-29T06:26:27,563 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_DBS_mm10.txt' 2022-08-29T06:26:27,571 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_DBS_mm10_exome.txt' 2022-08-29T06:26:27,663 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_SBS_mm10.txt' 2022-08-29T06:26:27,760 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3.3_SBS_mm10_exome.txt' 2022-08-29T06:26:27,771 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_DBS_mm10.txt' 2022-08-29T06:26:27,779 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_DBS_mm10_exome.txt' 2022-08-29T06:26:27,857 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_SBS_mm10.txt' 2022-08-29T06:26:27,938 adding 'SigProfilerAssignment/data/Reference_Signatures/mm10/COSMIC_v3_SBS_mm10_exome.txt' 2022-08-29T06:26:27,964 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v1_SBS_mm9.txt' 2022-08-29T06:26:27,985 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v1_SBS_mm9_exome.txt' 2022-08-29T06:26:28,016 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v2_SBS_mm9.txt' 2022-08-29T06:26:28,048 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v2_SBS_mm9_exome.txt' 2022-08-29T06:26:28,057 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_DBS_mm9.txt' 2022-08-29T06:26:28,065 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_DBS_mm9_exome.txt' 2022-08-29T06:26:28,150 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_SBS_mm9.txt' 2022-08-29T06:26:28,238 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.1_SBS_mm9_exome.txt' 2022-08-29T06:26:28,248 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_DBS_mm9.txt' 2022-08-29T06:26:28,256 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_DBS_mm9_exome.txt' 2022-08-29T06:26:28,349 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_SBS_mm9.txt' 2022-08-29T06:26:28,445 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.2_SBS_mm9_exome.txt' 2022-08-29T06:26:28,456 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_DBS_mm9.txt' 2022-08-29T06:26:28,463 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_DBS_mm9_exome.txt' 2022-08-29T06:26:28,557 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_SBS_mm9.txt' 2022-08-29T06:26:28,653 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3.3_SBS_mm9_exome.txt' 2022-08-29T06:26:28,663 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_DBS_mm9.txt' 2022-08-29T06:26:28,671 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_DBS_mm9_exome.txt' 2022-08-29T06:26:28,750 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_SBS_mm9.txt' 2022-08-29T06:26:28,831 adding 'SigProfilerAssignment/data/Reference_Signatures/mm9/COSMIC_v3_SBS_mm9_exome.txt' 2022-08-29T06:26:28,855 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v1_SBS_rn6.txt' 2022-08-29T06:26:28,877 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v1_SBS_rn6_exome.txt' 2022-08-29T06:26:28,908 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v2_SBS_rn6.txt' 2022-08-29T06:26:28,939 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v2_SBS_rn6_exome.txt' 2022-08-29T06:26:28,948 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_DBS_rn6.txt' 2022-08-29T06:26:28,956 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_DBS_rn6_exome.txt' 2022-08-29T06:26:29,041 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_SBS_rn6.txt' 2022-08-29T06:26:29,128 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.1_SBS_rn6_exome.txt' 2022-08-29T06:26:29,139 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_DBS_rn6.txt' 2022-08-29T06:26:29,147 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_DBS_rn6_exome.txt' 2022-08-29T06:26:29,240 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_SBS_rn6.txt' 2022-08-29T06:26:29,335 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.2_SBS_rn6_exome.txt' 2022-08-29T06:26:29,346 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_DBS_rn6.txt' 2022-08-29T06:26:29,354 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_DBS_rn6_exome.txt' 2022-08-29T06:26:29,447 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_SBS_rn6.txt' 2022-08-29T06:26:29,543 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3.3_SBS_rn6_exome.txt' 2022-08-29T06:26:29,554 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_DBS_rn6.txt' 2022-08-29T06:26:29,561 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_DBS_rn6_exome.txt' 2022-08-29T06:26:29,640 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_SBS_rn6.txt' 2022-08-29T06:26:29,726 adding 'SigProfilerAssignment/data/Reference_Signatures/rn6/COSMIC_v3_SBS_rn6_exome.txt' 2022-08-29T06:26:29,745 adding 'SigProfilerAssignment/data/vcftest/PD3851a.vcf' 2022-08-29T06:26:29,795 adding 'SigProfilerAssignment/data/vcftest/PD3890a.vcf' 2022-08-29T06:26:29,843 adding 'SigProfilerAssignment/data/vcftest/PD3904a.vcf' 2022-08-29T06:26:29,883 adding 'SigProfilerAssignment/data/vcftest/PD3905a.vcf' 2022-08-29T06:26:29,966 adding 'SigProfilerAssignment/data/vcftest/PD3945a.vcf' 2022-08-29T06:26:30,020 adding 'SigProfilerAssignment/data/vcftest/PD4005a.vcf' 2022-08-29T06:26:30,095 adding 'SigProfilerAssignment/data/vcftest/PD4006a.vcf' 2022-08-29T06:26:30,121 adding 'SigProfilerAssignment/data/vcftest/PD4085a.vcf' 2022-08-29T06:26:30,140 adding 'SigProfilerAssignment/data/vcftest/PD4086a.vcf' 2022-08-29T06:26:30,155 adding 'SigProfilerAssignment/data/vcftest/PD4088a.vcf' 2022-08-29T06:26:30,197 adding 'SigProfilerAssignment/data/vcftest/PD4103a.vcf' 2022-08-29T06:26:30,279 adding 'SigProfilerAssignment/data/vcftest/PD4107a.vcf' 2022-08-29T06:26:30,361 adding 'SigProfilerAssignment/data/vcftest/PD4109a.vcf' 2022-08-29T06:26:30,445 adding 'SigProfilerAssignment/data/vcftest/PD4115a.vcf' 2022-08-29T06:26:30,513 adding 'SigProfilerAssignment/data/vcftest/PD4116a.vcf' 2022-08-29T06:26:30,976 adding 'SigProfilerAssignment/data/vcftest/PD4120a.vcf' 2022-08-29T06:26:31,041 adding 'SigProfilerAssignment/data/vcftest/PD4192a.vcf' 2022-08-29T06:26:31,055 adding 'SigProfilerAssignment/data/vcftest/PD4194a.vcf' 2022-08-29T06:26:31,093 adding 'SigProfilerAssignment/data/vcftest/PD4198a.vcf' 2022-08-29T06:26:31,147 adding 'SigProfilerAssignment/data/vcftest/PD4199a.vcf' 2022-08-29T06:26:31,171 adding 'SigProfilerAssignment/data/vcftest/PD4248a.vcf' 2022-08-29T06:26:31,178 adding 'SigProfilerAssignment/src/Accolade_fermante.png' 2022-08-29T06:26:31,181 adding 'SigProfilerAssignment/src/CREDIT.md' 2022-08-29T06:26:31,454 adding 'SigProfilerAssignment/src/Fonts/Arial Bold.ttf' 2022-08-29T06:26:31,477 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS1248.all' 2022-08-29T06:26:31,480 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS186.all' 2022-08-29T06:26:31,498 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS2976.all' 2022-08-29T06:26:31,502 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.DBS78.all' 2022-08-29T06:26:31,504 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.ID28.all' 2022-08-29T06:26:31,507 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.ID415.all' 2022-08-29T06:26:31,510 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.ID83.all' 2022-08-29T06:26:31,518 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS1536.all' 2022-08-29T06:26:31,521 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS24.all' 2022-08-29T06:26:31,524 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS384.all' 2022-08-29T06:26:31,526 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS6.all' 2022-08-29T06:26:31,565 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS6144.all' 2022-08-29T06:26:31,570 adding 'SigProfilerAssignment/src/FormatFiles/Sample_Files.SBS96.all' 2022-08-29T06:26:31,574 adding 'SigProfilerAssignment-0.0.11.dist-info/LICENSE.txt' 2022-08-29T06:26:31,577 adding 'SigProfilerAssignment-0.0.11.dist-info/METADATA' 2022-08-29T06:26:31,579 adding 'SigProfilerAssignment-0.0.11.dist-info/WHEEL' 2022-08-29T06:26:31,581 adding 'SigProfilerAssignment-0.0.11.dist-info/top_level.txt' 2022-08-29T06:26:31,586 adding 'SigProfilerAssignment-0.0.11.dist-info/RECORD' 2022-08-29T06:26:31,771 removing build/bdist.linux-armv7l/wheel 2022-08-29T06:26:32,107 Building wheel for sigprofilerassignment (setup.py): finished with status 'done' 2022-08-29T06:26:32,274 Created wheel for sigprofilerassignment: filename=SigProfilerAssignment-0.0.11-py3-none-any.whl size=5430817 sha256=574046385266b88bb9ccbd1ca51b8051d5f54ab3ae93a165cbb81f5fba067103 2022-08-29T06:26:32,276 Stored in directory: /tmp/pip-ephem-wheel-cache-xo9y3d87/wheels/59/33/ec/000e941c2d2e023fd7294274ad60448657377cbd2033b4167f 2022-08-29T06:26:32,319 Successfully built sigprofilerassignment 2022-08-29T06:26:32,745 Removed build tracker: '/tmp/pip-build-tracker-9yo4r23r'