2022-08-30T17:58:42,246 Created temporary directory: /tmp/pip-ephem-wheel-cache-ztsqkjl5 2022-08-30T17:58:42,252 Created temporary directory: /tmp/pip-build-tracker-f1qycyle 2022-08-30T17:58:42,253 Initialized build tracking at /tmp/pip-build-tracker-f1qycyle 2022-08-30T17:58:42,253 Created build tracker: /tmp/pip-build-tracker-f1qycyle 2022-08-30T17:58:42,254 Entered build tracker: /tmp/pip-build-tracker-f1qycyle 2022-08-30T17:58:42,255 Created temporary directory: /tmp/pip-wheel-zzherkxk 2022-08-30T17:58:42,328 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-30T17:58:42,336 2 location(s) to search for versions of clinical-benchmarks: 2022-08-30T17:58:42,336 * https://pypi.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,336 * https://www.piwheels.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,337 Fetching project page and analyzing links: https://pypi.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,338 Getting page https://pypi.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,342 Found index url https://pypi.org/simple 2022-08-30T17:58:42,529 Skipping link: No binaries permitted for clinical-benchmarks: https://files.pythonhosted.org/packages/8d/70/e2e57b556751654a1624b490056f775660abe3336262a9dc0adb217fca74/clinical_benchmarks-0.1-py3-none-any.whl#sha256=a7e67ccba785608200684187079dae370b2e9a48c85fffab513d8d38ac771ab9 (from https://pypi.org/simple/clinical-benchmarks/) (requires-python:>=3.6) 2022-08-30T17:58:42,529 Skipping link: No binaries permitted for clinical-benchmarks: https://files.pythonhosted.org/packages/6e/4b/212f7e1f9d967c4943520095091f611dd4c96ad1c63a71ad21748c4b1c47/clinical_benchmarks-0.2.0-py3-none-any.whl#sha256=0118a33baf4c5d609a7376681900e482d95605c6ecf2d4eef92661838710d77b (from https://pypi.org/simple/clinical-benchmarks/) (requires-python:>=3.6) 2022-08-30T17:58:42,531 Found link https://files.pythonhosted.org/packages/10/bd/59d01da69d561cb712208acfb9682abe87218bd40772b433d51092a8ea2d/clinical_benchmarks-0.2.0.tar.gz#sha256=f0244312ce7f756ab9b1b494d4ec576789694da520a4d7732a51fd5f68873be1 (from https://pypi.org/simple/clinical-benchmarks/) (requires-python:>=3.6), version: 0.2.0 2022-08-30T17:58:42,532 Fetching project page and analyzing links: https://www.piwheels.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,532 Getting page https://www.piwheels.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,534 Found index url https://www.piwheels.org/simple 2022-08-30T17:58:42,754 Skipping link: not a file: https://www.piwheels.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,755 Skipping link: not a file: https://pypi.org/simple/clinical-benchmarks/ 2022-08-30T17:58:42,789 Given no hashes to check 1 links for project 'clinical-benchmarks': discarding no candidates 2022-08-30T17:58:42,821 Collecting clinical-benchmarks==0.2.0 2022-08-30T17:58:42,825 Created temporary directory: /tmp/pip-unpack-787xazns 2022-08-30T17:58:43,068 Downloading clinical_benchmarks-0.2.0.tar.gz (23 kB) 2022-08-30T17:58:43,277 Added clinical-benchmarks==0.2.0 from https://files.pythonhosted.org/packages/10/bd/59d01da69d561cb712208acfb9682abe87218bd40772b433d51092a8ea2d/clinical_benchmarks-0.2.0.tar.gz#sha256=f0244312ce7f756ab9b1b494d4ec576789694da520a4d7732a51fd5f68873be1 to build tracker '/tmp/pip-build-tracker-f1qycyle' 2022-08-30T17:58:43,280 Running setup.py (path:/tmp/pip-wheel-zzherkxk/clinical-benchmarks_74687eb243164082949ed0e2b394f76c/setup.py) egg_info for package clinical-benchmarks 2022-08-30T17:58:43,282 Created temporary directory: /tmp/pip-pip-egg-info-troda2nh 2022-08-30T17:58:43,282 Preparing metadata (setup.py): started 2022-08-30T17:58:43,284 Running command python setup.py egg_info 2022-08-30T17:58:51,546 running egg_info 2022-08-30T17:58:51,551 creating /tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info 2022-08-30T17:58:52,290 writing /tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/PKG-INFO 2022-08-30T17:58:52,887 writing dependency_links to /tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/dependency_links.txt 2022-08-30T17:58:54,667 writing entry points to /tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/entry_points.txt 2022-08-30T17:58:56,455 writing top-level names to /tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/top_level.txt 2022-08-30T17:58:56,458 writing manifest file '/tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/SOURCES.txt' 2022-08-30T17:58:57,515 reading manifest file '/tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/SOURCES.txt' 2022-08-30T17:58:57,518 reading manifest template 'MANIFEST.in' 2022-08-30T17:58:57,548 adding license file 'LICENSE' 2022-08-30T17:58:57,556 writing manifest file '/tmp/pip-pip-egg-info-troda2nh/clinical_benchmarks.egg-info/SOURCES.txt' 2022-08-30T17:58:57,778 Preparing metadata (setup.py): finished with status 'done' 2022-08-30T17:58:57,790 Source in /tmp/pip-wheel-zzherkxk/clinical-benchmarks_74687eb243164082949ed0e2b394f76c has version 0.2.0, which satisfies requirement clinical-benchmarks==0.2.0 from https://files.pythonhosted.org/packages/10/bd/59d01da69d561cb712208acfb9682abe87218bd40772b433d51092a8ea2d/clinical_benchmarks-0.2.0.tar.gz#sha256=f0244312ce7f756ab9b1b494d4ec576789694da520a4d7732a51fd5f68873be1 2022-08-30T17:58:57,792 Removed clinical-benchmarks==0.2.0 from https://files.pythonhosted.org/packages/10/bd/59d01da69d561cb712208acfb9682abe87218bd40772b433d51092a8ea2d/clinical_benchmarks-0.2.0.tar.gz#sha256=f0244312ce7f756ab9b1b494d4ec576789694da520a4d7732a51fd5f68873be1 from build tracker '/tmp/pip-build-tracker-f1qycyle' 2022-08-30T17:58:57,805 Created temporary directory: /tmp/pip-unpack-fwqqrqxl 2022-08-30T17:58:57,806 Building wheels for collected packages: clinical-benchmarks 2022-08-30T17:58:57,817 Created temporary directory: /tmp/pip-wheel-fspkrfyg 2022-08-30T17:58:57,818 Building wheel for clinical-benchmarks (setup.py): started 2022-08-30T17:58:57,820 Destination directory: /tmp/pip-wheel-fspkrfyg 2022-08-30T17:58:57,820 Running command python setup.py bdist_wheel 2022-08-30T17:59:05,519 running bdist_wheel 2022-08-30T17:59:05,948 running build 2022-08-30T17:59:05,948 running build_py 2022-08-30T17:59:06,689 creating build 2022-08-30T17:59:06,689 creating build/lib 2022-08-30T17:59:06,690 creating build/lib/clinical_benchmarks 2022-08-30T17:59:06,693 copying clinical_benchmarks/__init__.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,697 copying clinical_benchmarks/utils.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,701 copying clinical_benchmarks/extract.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,705 copying clinical_benchmarks/clean.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,709 copying clinical_benchmarks/evaluate.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,712 copying clinical_benchmarks/model.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,716 copying clinical_benchmarks/preprocess.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,720 copying clinical_benchmarks/merge.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,724 copying clinical_benchmarks/__main__.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,729 copying clinical_benchmarks/transform.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,732 copying clinical_benchmarks/data.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,735 copying clinical_benchmarks/task.py -> build/lib/clinical_benchmarks 2022-08-30T17:59:06,741 creating build/lib/clinical_benchmarks/query 2022-08-30T17:59:06,742 copying clinical_benchmarks/query/__init__.py -> build/lib/clinical_benchmarks/query 2022-08-30T17:59:06,746 creating build/lib/clinical_benchmarks/query/mimic 2022-08-30T17:59:06,748 copying clinical_benchmarks/query/mimic/__init__.py -> build/lib/clinical_benchmarks/query/mimic 2022-08-30T17:59:06,753 creating build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:06,754 copying clinical_benchmarks/query/mimic/feature/__init__.py -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:06,758 creating build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:06,760 copying clinical_benchmarks/query/mimic/outcome/__init__.py -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:06,764 creating build/lib/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:06,765 copying clinical_benchmarks/query/mimic/task_cohort/__init__.py -> build/lib/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:06,768 running egg_info 2022-08-30T17:59:08,269 writing clinical_benchmarks.egg-info/PKG-INFO 2022-08-30T17:59:08,863 writing dependency_links to clinical_benchmarks.egg-info/dependency_links.txt 2022-08-30T17:59:10,645 writing entry points to clinical_benchmarks.egg-info/entry_points.txt 2022-08-30T17:59:12,424 writing top-level names to clinical_benchmarks.egg-info/top_level.txt 2022-08-30T17:59:12,581 reading manifest file 'clinical_benchmarks.egg-info/SOURCES.txt' 2022-08-30T17:59:12,592 reading manifest template 'MANIFEST.in' 2022-08-30T17:59:12,619 adding license file 'LICENSE' 2022-08-30T17:59:12,628 writing manifest file 'clinical_benchmarks.egg-info/SOURCES.txt' 2022-08-30T17:59:12,637 copying clinical_benchmarks/query/mimic/cohort.sql -> build/lib/clinical_benchmarks/query/mimic 2022-08-30T17:59:12,641 copying clinical_benchmarks/query/mimic/cohort_first_day.sql -> build/lib/clinical_benchmarks/query/mimic 2022-08-30T17:59:12,645 copying clinical_benchmarks/query/mimic/donor_patients.sql -> build/lib/clinical_benchmarks/query/mimic 2022-08-30T17:59:12,649 copying clinical_benchmarks/query/mimic/feature/chemistry.sql -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:12,653 copying clinical_benchmarks/query/mimic/feature/coagulation.sql -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:12,657 copying clinical_benchmarks/query/mimic/feature/complete_blood_count.sql -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:12,660 copying clinical_benchmarks/query/mimic/feature/height.sql -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:12,664 copying clinical_benchmarks/query/mimic/feature/vitalsign.sql -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:12,667 copying clinical_benchmarks/query/mimic/feature/weight.sql -> build/lib/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:12,671 copying clinical_benchmarks/query/mimic/outcome/dialysis.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,675 copying clinical_benchmarks/query/mimic/outcome/heparin_dose.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,678 copying clinical_benchmarks/query/mimic/outcome/inv_vent.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,682 copying clinical_benchmarks/query/mimic/outcome/labevents.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,685 copying clinical_benchmarks/query/mimic/outcome/los_icu.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,689 copying clinical_benchmarks/query/mimic/outcome/mortality.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,693 copying clinical_benchmarks/query/mimic/outcome/vancomycin_dose.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,696 copying clinical_benchmarks/query/mimic/outcome/vancomycin_level.sql -> build/lib/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:12,700 copying clinical_benchmarks/query/mimic/task_cohort/heparin_cohort.sql -> build/lib/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:12,704 copying clinical_benchmarks/query/mimic/task_cohort/vancomycin_cohort.sql -> build/lib/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:13,455 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-08-30T17:59:13,456 setuptools.SetuptoolsDeprecationWarning, 2022-08-30T17:59:14,199 installing to build/bdist.linux-armv7l/wheel 2022-08-30T17:59:14,199 running install 2022-08-30T17:59:14,260 running install_lib 2022-08-30T17:59:15,004 creating build/bdist.linux-armv7l 2022-08-30T17:59:15,005 creating build/bdist.linux-armv7l/wheel 2022-08-30T17:59:15,009 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,011 copying build/lib/clinical_benchmarks/__init__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,015 copying build/lib/clinical_benchmarks/utils.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,018 copying build/lib/clinical_benchmarks/extract.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,022 copying build/lib/clinical_benchmarks/clean.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,026 copying build/lib/clinical_benchmarks/evaluate.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,029 copying build/lib/clinical_benchmarks/model.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,033 copying build/lib/clinical_benchmarks/preprocess.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,037 copying build/lib/clinical_benchmarks/merge.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,041 copying build/lib/clinical_benchmarks/__main__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,045 copying build/lib/clinical_benchmarks/transform.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,049 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks/query 2022-08-30T17:59:15,051 copying build/lib/clinical_benchmarks/query/__init__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query 2022-08-30T17:59:15,055 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic 2022-08-30T17:59:15,057 copying build/lib/clinical_benchmarks/query/mimic/__init__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic 2022-08-30T17:59:15,060 copying build/lib/clinical_benchmarks/query/mimic/cohort_first_day.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic 2022-08-30T17:59:15,063 copying build/lib/clinical_benchmarks/query/mimic/cohort.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic 2022-08-30T17:59:15,068 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,069 copying build/lib/clinical_benchmarks/query/mimic/feature/complete_blood_count.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,073 copying build/lib/clinical_benchmarks/query/mimic/feature/coagulation.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,077 copying build/lib/clinical_benchmarks/query/mimic/feature/__init__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,080 copying build/lib/clinical_benchmarks/query/mimic/feature/height.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,083 copying build/lib/clinical_benchmarks/query/mimic/feature/chemistry.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,087 copying build/lib/clinical_benchmarks/query/mimic/feature/weight.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,090 copying build/lib/clinical_benchmarks/query/mimic/feature/vitalsign.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/feature 2022-08-30T17:59:15,095 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,096 copying build/lib/clinical_benchmarks/query/mimic/outcome/labevents.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,101 copying build/lib/clinical_benchmarks/query/mimic/outcome/__init__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,103 copying build/lib/clinical_benchmarks/query/mimic/outcome/los_icu.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,107 copying build/lib/clinical_benchmarks/query/mimic/outcome/mortality.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,110 copying build/lib/clinical_benchmarks/query/mimic/outcome/dialysis.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,113 copying build/lib/clinical_benchmarks/query/mimic/outcome/heparin_dose.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,117 copying build/lib/clinical_benchmarks/query/mimic/outcome/vancomycin_dose.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,120 copying build/lib/clinical_benchmarks/query/mimic/outcome/vancomycin_level.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,124 copying build/lib/clinical_benchmarks/query/mimic/outcome/inv_vent.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/outcome 2022-08-30T17:59:15,127 copying build/lib/clinical_benchmarks/query/mimic/donor_patients.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic 2022-08-30T17:59:15,132 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:15,133 copying build/lib/clinical_benchmarks/query/mimic/task_cohort/__init__.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:15,136 copying build/lib/clinical_benchmarks/query/mimic/task_cohort/heparin_cohort.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:15,140 copying build/lib/clinical_benchmarks/query/mimic/task_cohort/vancomycin_cohort.sql -> build/bdist.linux-armv7l/wheel/clinical_benchmarks/query/mimic/task_cohort 2022-08-30T17:59:15,143 copying build/lib/clinical_benchmarks/data.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,146 copying build/lib/clinical_benchmarks/task.py -> build/bdist.linux-armv7l/wheel/clinical_benchmarks 2022-08-30T17:59:15,150 running install_egg_info 2022-08-30T17:59:15,902 Copying clinical_benchmarks.egg-info to build/bdist.linux-armv7l/wheel/clinical_benchmarks-0.2.0-py3.7.egg-info 2022-08-30T17:59:15,924 running install_scripts 2022-08-30T17:59:16,113 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-08-30T17:59:16,122 creating build/bdist.linux-armv7l/wheel/clinical_benchmarks-0.2.0.dist-info/WHEEL 2022-08-30T17:59:16,127 creating '/tmp/pip-wheel-fspkrfyg/clinical_benchmarks-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-30T17:59:16,131 adding 'clinical_benchmarks/__init__.py' 2022-08-30T17:59:16,135 adding 'clinical_benchmarks/__main__.py' 2022-08-30T17:59:16,138 adding 'clinical_benchmarks/clean.py' 2022-08-30T17:59:16,140 adding 'clinical_benchmarks/data.py' 2022-08-30T17:59:16,142 adding 'clinical_benchmarks/evaluate.py' 2022-08-30T17:59:16,145 adding 'clinical_benchmarks/extract.py' 2022-08-30T17:59:16,149 adding 'clinical_benchmarks/merge.py' 2022-08-30T17:59:16,152 adding 'clinical_benchmarks/model.py' 2022-08-30T17:59:16,155 adding 'clinical_benchmarks/preprocess.py' 2022-08-30T17:59:16,159 adding 'clinical_benchmarks/task.py' 2022-08-30T17:59:16,162 adding 'clinical_benchmarks/transform.py' 2022-08-30T17:59:16,165 adding 'clinical_benchmarks/utils.py' 2022-08-30T17:59:16,168 adding 'clinical_benchmarks/query/__init__.py' 2022-08-30T17:59:16,171 adding 'clinical_benchmarks/query/mimic/__init__.py' 2022-08-30T17:59:16,174 adding 'clinical_benchmarks/query/mimic/cohort.sql' 2022-08-30T17:59:16,176 adding 'clinical_benchmarks/query/mimic/cohort_first_day.sql' 2022-08-30T17:59:16,179 adding 'clinical_benchmarks/query/mimic/donor_patients.sql' 2022-08-30T17:59:16,183 adding 'clinical_benchmarks/query/mimic/feature/__init__.py' 2022-08-30T17:59:16,186 adding 'clinical_benchmarks/query/mimic/feature/chemistry.sql' 2022-08-30T17:59:16,188 adding 'clinical_benchmarks/query/mimic/feature/coagulation.sql' 2022-08-30T17:59:16,190 adding 'clinical_benchmarks/query/mimic/feature/complete_blood_count.sql' 2022-08-30T17:59:16,192 adding 'clinical_benchmarks/query/mimic/feature/height.sql' 2022-08-30T17:59:16,195 adding 'clinical_benchmarks/query/mimic/feature/vitalsign.sql' 2022-08-30T17:59:16,197 adding 'clinical_benchmarks/query/mimic/feature/weight.sql' 2022-08-30T17:59:16,200 adding 'clinical_benchmarks/query/mimic/outcome/__init__.py' 2022-08-30T17:59:16,203 adding 'clinical_benchmarks/query/mimic/outcome/dialysis.sql' 2022-08-30T17:59:16,205 adding 'clinical_benchmarks/query/mimic/outcome/heparin_dose.sql' 2022-08-30T17:59:16,207 adding 'clinical_benchmarks/query/mimic/outcome/inv_vent.sql' 2022-08-30T17:59:16,210 adding 'clinical_benchmarks/query/mimic/outcome/labevents.sql' 2022-08-30T17:59:16,212 adding 'clinical_benchmarks/query/mimic/outcome/los_icu.sql' 2022-08-30T17:59:16,214 adding 'clinical_benchmarks/query/mimic/outcome/mortality.sql' 2022-08-30T17:59:16,216 adding 'clinical_benchmarks/query/mimic/outcome/vancomycin_dose.sql' 2022-08-30T17:59:16,219 adding 'clinical_benchmarks/query/mimic/outcome/vancomycin_level.sql' 2022-08-30T17:59:16,222 adding 'clinical_benchmarks/query/mimic/task_cohort/__init__.py' 2022-08-30T17:59:16,224 adding 'clinical_benchmarks/query/mimic/task_cohort/heparin_cohort.sql' 2022-08-30T17:59:16,226 adding 'clinical_benchmarks/query/mimic/task_cohort/vancomycin_cohort.sql' 2022-08-30T17:59:16,231 adding 'clinical_benchmarks-0.2.0.dist-info/LICENSE' 2022-08-30T17:59:16,234 adding 'clinical_benchmarks-0.2.0.dist-info/METADATA' 2022-08-30T17:59:16,236 adding 'clinical_benchmarks-0.2.0.dist-info/WHEEL' 2022-08-30T17:59:16,238 adding 'clinical_benchmarks-0.2.0.dist-info/entry_points.txt' 2022-08-30T17:59:16,239 adding 'clinical_benchmarks-0.2.0.dist-info/top_level.txt' 2022-08-30T17:59:16,241 adding 'clinical_benchmarks-0.2.0.dist-info/RECORD' 2022-08-30T17:59:16,245 removing build/bdist.linux-armv7l/wheel 2022-08-30T17:59:16,507 Building wheel for clinical-benchmarks (setup.py): finished with status 'done' 2022-08-30T17:59:16,515 Created wheel for clinical-benchmarks: filename=clinical_benchmarks-0.2.0-py3-none-any.whl size=31874 sha256=affae52059faec5c976793e88d4269ba21f549ea4cc44c6e93e76252046ce6fa 2022-08-30T17:59:16,517 Stored in directory: /tmp/pip-ephem-wheel-cache-ztsqkjl5/wheels/86/54/ae/387960bd39715be9c3b3ef2cdb7d56230c820ebe3f23377bbc 2022-08-30T17:59:16,543 Successfully built clinical-benchmarks 2022-08-30T17:59:16,552 Removed build tracker: '/tmp/pip-build-tracker-f1qycyle'