2022-08-31T06:53:39,938 Created temporary directory: /tmp/pip-ephem-wheel-cache-qjpoca02 2022-08-31T06:53:39,943 Created temporary directory: /tmp/pip-build-tracker-v5xa1kmx 2022-08-31T06:53:39,944 Initialized build tracking at /tmp/pip-build-tracker-v5xa1kmx 2022-08-31T06:53:39,945 Created build tracker: /tmp/pip-build-tracker-v5xa1kmx 2022-08-31T06:53:39,945 Entered build tracker: /tmp/pip-build-tracker-v5xa1kmx 2022-08-31T06:53:39,946 Created temporary directory: /tmp/pip-wheel-7s_zl76x 2022-08-31T06:53:40,017 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-08-31T06:53:40,026 2 location(s) to search for versions of sequana-pacbio-qc: 2022-08-31T06:53:40,026 * https://pypi.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,026 * https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,027 Fetching project page and analyzing links: https://pypi.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,028 Getting page https://pypi.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,031 Found index url https://pypi.org/simple 2022-08-31T06:53:40,231 Found link https://files.pythonhosted.org/packages/69/a4/21cd9f8edb0c96b180d6bb078baba01dcd8a1eb5ec6b8e17156092f51b05/sequana_pacbio_qc-0.9.0.tar.gz#sha256=edadb3fe844371c9f06595b9efb2cfce2995ad64fbc3155cffd6d38272df551f (from https://pypi.org/simple/sequana-pacbio-qc/), version: 0.9.0 2022-08-31T06:53:40,232 Found link https://files.pythonhosted.org/packages/14/55/46905d4bfd9030b4f532142ef839ca0de03e30e685a3e8d17358018e684b/sequana_pacbio_qc-0.10.0.tar.gz#sha256=3b7d81956a154cf3814a772ceb42d14bf18238b827824ae86c61b948fb95ff8b (from https://pypi.org/simple/sequana-pacbio-qc/), version: 0.10.0 2022-08-31T06:53:40,232 Found link https://files.pythonhosted.org/packages/e6/4b/0b5288ab2c43d9fa1c6d28e7b7c7b52a73a4d68fef622a7310e1e0dda77e/sequana_pacbio_qc-0.11.0.tar.gz#sha256=5dac686b071af0977cafa3a88385ff6de4e62488db02e52d3a891804a985379d (from https://pypi.org/simple/sequana-pacbio-qc/), version: 0.11.0 2022-08-31T06:53:40,233 Fetching project page and analyzing links: https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,234 Getting page https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,236 Found index url https://www.piwheels.org/simple 2022-08-31T06:53:40,446 Skipping link: No binaries permitted for sequana-pacbio-qc: https://www.piwheels.org/simple/sequana-pacbio-qc/sequana_pacbio_qc-0.10.0-py3-none-any.whl#sha256=1cbb91c8d0e78c84ae520116b43cef9cbfe142f8ce9e9ee9a1505bbf0914bdd9 (from https://www.piwheels.org/simple/sequana-pacbio-qc/) 2022-08-31T06:53:40,447 Skipping link: No binaries permitted for sequana-pacbio-qc: https://www.piwheels.org/simple/sequana-pacbio-qc/sequana_pacbio_qc-0.9.0-py3-none-any.whl#sha256=a0a02bdc1951bac94df4799610d147ada2096f05d9eecb93bc8f385033ed711d (from https://www.piwheels.org/simple/sequana-pacbio-qc/) 2022-08-31T06:53:40,447 Skipping link: not a file: https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,448 Skipping link: not a file: https://pypi.org/simple/sequana-pacbio-qc/ 2022-08-31T06:53:40,482 Given no hashes to check 1 links for project 'sequana-pacbio-qc': discarding no candidates 2022-08-31T06:53:40,517 Collecting sequana-pacbio-qc==0.11.0 2022-08-31T06:53:40,521 Created temporary directory: /tmp/pip-unpack-u0lmje_i 2022-08-31T06:53:40,777 Downloading sequana_pacbio_qc-0.11.0.tar.gz (30 kB) 2022-08-31T06:53:40,879 Added sequana-pacbio-qc==0.11.0 from https://files.pythonhosted.org/packages/e6/4b/0b5288ab2c43d9fa1c6d28e7b7c7b52a73a4d68fef622a7310e1e0dda77e/sequana_pacbio_qc-0.11.0.tar.gz#sha256=5dac686b071af0977cafa3a88385ff6de4e62488db02e52d3a891804a985379d to build tracker '/tmp/pip-build-tracker-v5xa1kmx' 2022-08-31T06:53:40,882 Running setup.py (path:/tmp/pip-wheel-7s_zl76x/sequana-pacbio-qc_398740a2ee814b578c3941cd2be65af3/setup.py) egg_info for package sequana-pacbio-qc 2022-08-31T06:53:40,883 Created temporary directory: /tmp/pip-pip-egg-info-igips2_w 2022-08-31T06:53:40,884 Preparing metadata (setup.py): started 2022-08-31T06:53:40,886 Running command python setup.py egg_info 2022-08-31T06:53:49,043 running egg_info 2022-08-31T06:53:49,049 creating /tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info 2022-08-31T06:53:49,719 writing /tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/PKG-INFO 2022-08-31T06:53:50,308 writing dependency_links to /tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/dependency_links.txt 2022-08-31T06:53:52,068 writing entry points to /tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/entry_points.txt 2022-08-31T06:53:53,241 writing requirements to /tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/requires.txt 2022-08-31T06:53:53,829 writing top-level names to /tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/top_level.txt 2022-08-31T06:53:53,832 writing manifest file '/tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-08-31T06:53:54,694 reading manifest file '/tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-08-31T06:53:54,697 reading manifest template 'MANIFEST.in' 2022-08-31T06:53:54,700 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-08-31T06:53:54,701 warning: no previously-included files matching '*pyc' found under directory '*' 2022-08-31T06:53:54,703 warning: no previously-included files matching 'doc/wiki' found under directory '*' 2022-08-31T06:53:54,726 no previously-included directories found matching 'test' 2022-08-31T06:53:54,731 writing manifest file '/tmp/pip-pip-egg-info-igips2_w/sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-08-31T06:53:54,947 Preparing metadata (setup.py): finished with status 'done' 2022-08-31T06:53:54,959 Source in /tmp/pip-wheel-7s_zl76x/sequana-pacbio-qc_398740a2ee814b578c3941cd2be65af3 has version 0.11.0, which satisfies requirement sequana-pacbio-qc==0.11.0 from https://files.pythonhosted.org/packages/e6/4b/0b5288ab2c43d9fa1c6d28e7b7c7b52a73a4d68fef622a7310e1e0dda77e/sequana_pacbio_qc-0.11.0.tar.gz#sha256=5dac686b071af0977cafa3a88385ff6de4e62488db02e52d3a891804a985379d 2022-08-31T06:53:54,961 Removed sequana-pacbio-qc==0.11.0 from https://files.pythonhosted.org/packages/e6/4b/0b5288ab2c43d9fa1c6d28e7b7c7b52a73a4d68fef622a7310e1e0dda77e/sequana_pacbio_qc-0.11.0.tar.gz#sha256=5dac686b071af0977cafa3a88385ff6de4e62488db02e52d3a891804a985379d from build tracker '/tmp/pip-build-tracker-v5xa1kmx' 2022-08-31T06:53:54,971 Created temporary directory: /tmp/pip-unpack-7fugxnyd 2022-08-31T06:53:54,972 Building wheels for collected packages: sequana-pacbio-qc 2022-08-31T06:53:54,982 Created temporary directory: /tmp/pip-wheel-fsdh6lq8 2022-08-31T06:53:54,982 Building wheel for sequana-pacbio-qc (setup.py): started 2022-08-31T06:53:54,985 Destination directory: /tmp/pip-wheel-fsdh6lq8 2022-08-31T06:53:54,985 Running command python setup.py bdist_wheel 2022-08-31T06:54:02,639 running bdist_wheel 2022-08-31T06:54:04,052 running build 2022-08-31T06:54:04,052 running build_py 2022-08-31T06:54:04,735 creating build 2022-08-31T06:54:04,735 creating build/lib 2022-08-31T06:54:04,737 creating build/lib/sequana_pipelines 2022-08-31T06:54:04,738 creating build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,740 copying sequana_pipelines/pacbio_qc/__init__.py -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,744 copying sequana_pipelines/pacbio_qc/main.py -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,759 copying sequana_pipelines/pacbio_qc/config.yaml -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,763 copying sequana_pipelines/pacbio_qc/multiqc_config.yaml -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,769 copying sequana_pipelines/pacbio_qc/schema.yaml -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,773 copying sequana_pipelines/pacbio_qc/pacbio_qc.rules -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,779 copying sequana_pipelines/pacbio_qc/requirements.txt -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:04,783 copying sequana_pipelines/pacbio_qc/dag.png -> build/lib/sequana_pipelines/pacbio_qc 2022-08-31T06:54:05,520 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-08-31T06:54:05,521 setuptools.SetuptoolsDeprecationWarning, 2022-08-31T06:54:06,199 installing to build/bdist.linux-armv7l/wheel 2022-08-31T06:54:06,199 running install 2022-08-31T06:54:06,261 running install_lib 2022-08-31T06:54:06,946 creating build/bdist.linux-armv7l 2022-08-31T06:54:06,947 creating build/bdist.linux-armv7l/wheel 2022-08-31T06:54:06,950 creating build/bdist.linux-armv7l/wheel/sequana_pipelines 2022-08-31T06:54:06,952 creating build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,954 copying build/lib/sequana_pipelines/pacbio_qc/config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,958 copying build/lib/sequana_pipelines/pacbio_qc/pacbio_qc.rules -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,962 copying build/lib/sequana_pipelines/pacbio_qc/multiqc_config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,966 copying build/lib/sequana_pipelines/pacbio_qc/requirements.txt -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,970 copying build/lib/sequana_pipelines/pacbio_qc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,973 copying build/lib/sequana_pipelines/pacbio_qc/main.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,977 copying build/lib/sequana_pipelines/pacbio_qc/schema.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,980 copying build/lib/sequana_pipelines/pacbio_qc/dag.png -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-08-31T06:54:06,985 running install_egg_info 2022-08-31T06:54:08,366 running egg_info 2022-08-31T06:54:09,038 writing sequana_pacbio_qc.egg-info/PKG-INFO 2022-08-31T06:54:09,630 writing dependency_links to sequana_pacbio_qc.egg-info/dependency_links.txt 2022-08-31T06:54:11,399 writing entry points to sequana_pacbio_qc.egg-info/entry_points.txt 2022-08-31T06:54:12,578 writing requirements to sequana_pacbio_qc.egg-info/requires.txt 2022-08-31T06:54:13,171 writing top-level names to sequana_pacbio_qc.egg-info/top_level.txt 2022-08-31T06:54:13,267 reading manifest file 'sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-08-31T06:54:13,271 reading manifest template 'MANIFEST.in' 2022-08-31T06:54:13,274 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-08-31T06:54:13,275 warning: no previously-included files matching '*pyc' found under directory '*' 2022-08-31T06:54:13,276 warning: no previously-included files matching 'doc/wiki' found under directory '*' 2022-08-31T06:54:13,322 no previously-included directories found matching 'test' 2022-08-31T06:54:13,328 writing manifest file 'sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-08-31T06:54:13,331 Copying sequana_pacbio_qc.egg-info to build/bdist.linux-armv7l/wheel/sequana_pacbio_qc-0.11.0-py3.7.egg-info 2022-08-31T06:54:13,362 running install_scripts 2022-08-31T06:54:13,525 creating build/bdist.linux-armv7l/wheel/sequana_pacbio_qc-0.11.0.dist-info/WHEEL 2022-08-31T06:54:13,529 creating '/tmp/pip-wheel-fsdh6lq8/sequana_pacbio_qc-0.11.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-08-31T06:54:13,535 adding 'sequana_pipelines/pacbio_qc/__init__.py' 2022-08-31T06:54:13,538 adding 'sequana_pipelines/pacbio_qc/config.yaml' 2022-08-31T06:54:13,544 adding 'sequana_pipelines/pacbio_qc/dag.png' 2022-08-31T06:54:13,547 adding 'sequana_pipelines/pacbio_qc/main.py' 2022-08-31T06:54:13,551 adding 'sequana_pipelines/pacbio_qc/multiqc_config.yaml' 2022-08-31T06:54:13,555 adding 'sequana_pipelines/pacbio_qc/pacbio_qc.rules' 2022-08-31T06:54:13,558 adding 'sequana_pipelines/pacbio_qc/requirements.txt' 2022-08-31T06:54:13,560 adding 'sequana_pipelines/pacbio_qc/schema.yaml' 2022-08-31T06:54:13,562 adding 'sequana_pacbio_qc-0.11.0.dist-info/METADATA' 2022-08-31T06:54:13,564 adding 'sequana_pacbio_qc-0.11.0.dist-info/WHEEL' 2022-08-31T06:54:13,566 adding 'sequana_pacbio_qc-0.11.0.dist-info/entry_points.txt' 2022-08-31T06:54:13,568 adding 'sequana_pacbio_qc-0.11.0.dist-info/top_level.txt' 2022-08-31T06:54:13,570 adding 'sequana_pacbio_qc-0.11.0.dist-info/RECORD' 2022-08-31T06:54:13,573 removing build/bdist.linux-armv7l/wheel 2022-08-31T06:54:13,840 Building wheel for sequana-pacbio-qc (setup.py): finished with status 'done' 2022-08-31T06:54:13,848 Created wheel for sequana-pacbio-qc: filename=sequana_pacbio_qc-0.11.0-py3-none-any.whl size=30486 sha256=a3bb6ba78e0f61f963c0a4cafe4e2edba98220cc68f628f61251a585437c6a14 2022-08-31T06:54:13,850 Stored in directory: /tmp/pip-ephem-wheel-cache-qjpoca02/wheels/f6/fc/5b/cfa391df649c3603907b5112d394ad486bfebff87452acfce7 2022-08-31T06:54:13,874 Successfully built sequana-pacbio-qc 2022-08-31T06:54:13,884 Removed build tracker: '/tmp/pip-build-tracker-v5xa1kmx'